Supporting information for Wang et al. (2002) Proc. Natl. Acad. Sci. USA, 10.1073/pnas.202610899
Table 4. Primer sequences used for quantitative PCR analysis
Primer name | Forward primer | Reverse primer | Chromosome or accession no. | Location * |
Line-1 | AAAGCCGCTCAACTACATGG | TGCTTTGAATGCGTCCCAGAG | M80343 | 2721 |
Chr7-C | AGGCTAGTCTTGAACTCCTGACCTT | ACCCTCCGATCCAGTAATTCTACTC | Chromosome 7 | 54947607 |
Chr13-A | GAGCAGAGGCCAAGGGTGTG | CTATAACCTGGCACCCAAATGG | Chromosome 13 | 31963904 |
Chr13-B | CCCCACAGCAGTCTCCAAGAG | GCTGAGGTCTTTGGGACATGG | Chromosome 13 | 32256751 |
ChX-A | CATGACTTCAGGTGGTGCTAGAGA | GTATGCGTATATGTGGCAATACTGC | Chromosome X | 107127218 |
Ch4-hCT1955219-E8 | TTCCACTGAAAGGCCACAG | TGAACAAAATTAACTCAAATTGCTG | Chromosome 4 | 96488613 |
Ch16-hCT1951220-E5 | CCCTGGGGATCAAAATCAC | AATGGACTTGCTCATGCTTTC | Chromosome 16 | 69127944 |
Ch5-hCT1657046 | CTGGAAGGCTGGCAGATG | TTGCTCCTACCTGTGAATCTTG | Chromosome 5 | 58988143 |
Ch5 HD 5 'P | TCTGAACCATGGAGTTACAGAATGA | CAGTCACCTTTCTCTACTGCACAAA | Chromosome 5 | 59100130 |
Ch5 HD 5 'N | CAGAAAGTCCTCTTGCTCTTTTACG | TGTTTAGTGTCACTTGTTTCCCTGA | Chromosome 5 | 59184713 |
Ch5 HD 5 'L | TTGTATATAACAGGACGCACAATGG | GCAGACCCTTATTTTCAGGAGGTAT | Chromosome 5 | 59287952 |
Ch5 HD 5 'J | GCTTTCAAAAGGGAGAGACAAGAAT | CAAGGAGAGAAACTTATTCCCACTG | Chromosome 5 | 59390229 |
Ch5-hCT1645609EC | CTATCTTGTCCGGAGACTTTCATGT | TGACTCTAGAAACCCCATTGTTCTC | Chromosome 5 | 59432676 |
Ch5 HD 5 'G | TAACATATTGCGGGAATGAGTACCT | AAATCTCGTCCCCTTTAGACTATGG | Chromosome 5 | 59476551 |
Ch5 HD 5 'E | ATTGTCTGAAGATAGCTGGATTTGG | CAAATATCCTAGCCTGAAAGAAGCA | Chromosome 5 | 59570278 |
Ch5 HD 5 'D | ATCTGCTGCTGTTTTAAAGCATTTC | CCTTGTTCAAGGCTTTTTATTTTCA | Chromosome 5 | 59683856 |
Ch5-hCT1643862 | TGACCCGAGAATATCCCATC | TTCCGTTCATGTGGTGAATC | Chromosome 5 | 59877326 |
*Location of forward primer in bp. All products were <500 bp in size.