Jinushi et al. 10.1073/pnas.0603503103.

Supporting Information

Files in this Data Supplement:

Supporting Table 1
Supporting Figure 7
Supporting Figure 8
Supporting Figure 9
Supporting Figure 10





Fig. 7. Therapy-induced anti-MHC class I chain-related protein A (anti-MICA) antibodies do not block natural killer (NK) cell lysis of K562 cells. Magnetic bead-purified healthy donor or MEL15 NK cells obtained at different times were tested for lytic activity against 51Cr-labeled K562 targets. Autologous sera were added to the lytic assay where indicated.





Fig. 8. Vaccination with irradiated, autologous granulocyte-macrophage colony-stimulating factor (GM-CSF) secreting tumor cells alone elicited a potent humoral reaction to MHC class I chain-related protein A (MICA) that was temporally associated with a reduction in sMICA in some patients. (Upper) Longitudinal sera samples from vaccinated NSCLC patient L1 and vaccinated melanoma patients M37 and M34 were diluted 1:500 and analyzed by ELISA with recombinant MICA protein. Reactivity was determined with a pan-IgG secondary. (Lower) Serial soluble MICA (sMICA) levels were measured with a sandwich ELISA. Upward arrows depict tumor cell vaccinations. L1 exhibited disseminated, progressive nonsmall cell lung carcinoma upon study enrollment, but vaccination stimulated dense T and B cell infiltrates in metastatic lesions and disease stabilization for nearly 2 years (survival of 31 months). M37 entered study with visceral melanoma metastases, which were completely resected for vaccine manufacture. He was immunized for 2 years and remains disease-free 6 years after enrollment without further therapy. M34 presented with visceral melanoma metastases and achieved a partial clinical response to an initial course of immunization. Subsequent isolated recurrences were processed into additional vaccines, whereas the patient succumbed to progressive disease 4.5 years after study entry.





Fig. 9. Vaccine-induced anti-MHC class I chain-related protein A (anti-MICA) antibodies antagonized soluble MICA (sMICA) suppression of innate immune responses. (A) Normal donor peripheral blood mononuclear cells (PBMCs) were incubated for 48 h in sera, and NKG2D expression on gated natural killer (NK) cells was determined with flow cytometry. Sera samples were obtained before vaccination and at the end of therapy. (B) Healthy donor PBMCs were incubated in L1 pre- and postvaccination sera for 48 h and washed; NK cells were then purified with magnetic bead selection and tested for lytic activity. (C) NK cells were evaluated with M37 pre- and postvaccination sera as above.





Fig. 10. Vaccine-induced anti-MHC class I chain-related protein A (anti-MICA) antibodies antagonized soluble MICA (sMICA) suppression of adaptive immune responses and enhanced MICA-dependent cross-presentation. (A) Normal donor peripheral blood mononuclear cells (PBMCs) were incubated for 48 h in L1 and M37 sera, and NKG2D expression on gated CD8+ T cells was determined with flow cytometry. (B) The effects of L1 sera on the cross-presentation of M34-T and M34T-MICA cells was determined as in Fig. 3. (C) M37 sera.





Table 1. Targets identified in melanoma cDNA expression libraries using MEL15 sera

Pre-VAX

Post-VAX

Post-MDX-010

Antigen

Accession no.

Antigen

Accession no.

Antigen

Accession no.

K008 Library

K008 Library

K008 Library

Iron-transport regulator 5

BC009642

Stearoyl CoA desaturase

AF97514

Galectin-3

AF031425

Pleckstrin homology-like domain family member 2

BC01829

Macrophage migration inhibitory factor

BC022414

Actin-gamma

BC018774

Cathepsin B

BC010240

Calumerin

BC013383

Stearoyl CoA

desaturase

AF97514

LEREP04

AF109366

KIAA1049

BC009349

Macrophage migration

inhibitory factor

BC022414

 

 

 

 

Ribosomal protein

synthase II

BC016378

 

 

 

 

Annexin 2A

BC013843

 

 

 

 

NADH dehydroxygenase

subunit 3

AL136962

 

 

 

 

CD63

BT020138

 

 

 

 

IFN-induced

transmembrane protein 3

BC070243

 

 

 

 

F-box protein 7

BC041004

 

 

 

 

Formin-like 2

isoform A-D

NM052905

 

 

 

 

MICA

AF264741

 

 

 

 

 

 

 

 

 

 

M34 Library

 

 

 

 

Tubulin alpha 6

BC013383

 

 

 

 

Torsin A-interacting

protein 1

NM015602

 

 

 

 

Mannosyl transferase

AF007906

 

 

 

 

ATP synthase

(mitochondrial complex,

subunit F6)

BC001178

 

 

 

 

MICA

AF264741

Pre-VAX sera: 5/5/04; Post-VAX sera: 6/30/04; Post-MDX-010 sera: 10/1/04.