Supporting information for Sehadri et al. (2003) Proc. Natl. Acad. Sci. USA, 10.1073/pnas.0931379100

 

Table 2. List of pseudogenes in the C. burnetii genome

CBU1393

Peptide syntetase, degenerate

CBU1391

(2R)-Phospho-3-sulfolactate synthase, authentic frameshift

CBU1390

Phosphoadenosine phosphosulfate reductase family protein, authentic frameshift

CBU1389

Pyridoxal-dependent decarboxylase domain protein, degenerate

CBU1330

Amine oxidase, putative, degenerate

CBU1309

Polyketide synthase, putative, truncation

CBU1283

Transporter, putative, degenerate

CBU1271

Conserved hypothetical protein, authentic frameshift

CBU1251

Conserved hypothetical protein, authentic frameshift

CBU1174

Conserved hypothetical protein, authentic frameshift

CBU1172

Conserved hypothetical protein, authentic frameshift

CBU1153

Anthranilate synthase component II, degenerate

CBU1146

Antimicrobial peptide biosynthesis protein, putative, authentic point mutation

CBU1068

Adenylate cyclase, putative, authentic frameshift

CBU1037

Transporter domain protein, authentic frameshift

CBU1030

Pyridoxal-dependent decarboxylase, pyridoxal binding domain, authentic frameshift

CBU1009

CrcB protein, degenerate

CBU0983

Chorismate mutase/prephenate dehydratase, putative, authentic frameshift

CBU0958

Glycosyl hydrolase, family 65, degenerate

CBU0951

Conserved hypothetical protein, degenerate

CBU0950

Conserved hypothetical protein, authentic point mutation

CBU0947

Transposase, degenerate

CBU0938

Methyltransferase, putative, authentic frameshift

CBU0919

Potassium uptake protein, Kup system, degenerate

CBU0917

Conserved domain protein, authentic frameshift

CBU0887

Patatin family protein, authentic frameshift

CBU0882

Transposase, internal deletion

CBU0871

Conserved hypothetical protein, authentic frameshift

CBU0855

Competence protein, putative, degenerate

CBU0783

β-Lactamase, degenerate

CBU0778

Protease I, authentic frameshift

CBU0765

Long-chain fatty-acid–CoA ligase, authentic frameshift

CBU0764

Acyl-CoA dehydrogenase family protein, degenerate

CBU0759

Conserved hypothetical protein, authentic frameshift

CBU0726

β-Lactamase, putative,

degenerate

CBU0725

β-Lactamase, degenerate

CBU0717

Pyruvate oxidase, putative, degenerate

CBU0708

Conserved hypothetical protein, authentic point mutation

CBU0551

Conserved hypothetical protein, authentic frameshift

CBU0512

Conserved hypothetical protein, authentic frameshift

CBU0511

Transporter, putative, authentic frameshift

CBU0464

Competence protein, putative, authentic frameshift

CBU0449

3',5'-Cyclic-nucleotide phosphodiesterase, authentic frameshift

CBU0428

Peptide chain release factor 2, authentic frameshift

CBU0408

Drug resistance protein, putative, degenerate

CBU0374

Citrate lyase

β subunit, authentic frameshift

CBU0363

Conserved hypothetical protein, authentic frameshift

CBU0345

Xylose isomerase, authentic frameshift

CBU0320

IcmF protein, authentic point mutation

CBU0292

DNA repair protein RadC, degenerate

CBU0219

Cytochrome d ubiquinol oxidase, subunit II, authentic frameshift

CBU0208

Lipoprotein, putative, authentic frameshift

CBU0164

Conserved hypothetical protein, authentic frameshift

CBU0163

Conserved hypothetical protein, degenerate

CBU0161

Conserved hypothetical protein, authentic frameshift

CBU0160

Conserved hypothetical protein, authentic frameshift

CBU0105

Membrane protein, putative, authentic frameshift

CBU0047

ABC transporter, ATP-binding protein, authentic frameshift

CBU0046

ABC transporter, permease protein, authentic frameshift

CBU0028

Alkyl-dihydroxyacetonephosphate synthase, putative, authentic frameshift

CBU2066

Membrane protein, putative, authentic frameshift

CBU2043

GGDEF/EAL domain protein, authentic frameshift

CBU2039

ABC transporter, ATP-binding/permease protein, authentic point mutation

CBU2022

comM protein, putative, authentic frameshift

CBU2015

Transporter, POT family, authentic frameshift

CBU1949

Conserved hypothetical protein, authentic point mutation

CBU1937

Conserved hypothetical protein, authentic frameshift

CBU1848

Conserved hypothetical protein, authentic frameshift

CBU1844

Conserved hypothetical protein, authentic point mutation

CBU1792

Transporter, putative, degenerate

CBU1731

Sodium-dependent symporter family protein, degenerate

CBU1687

Conserved hypothetical protein, degenerate

CBU1606

Resolvase, degenerate

CBU0561

Phytochelatin synthase, putative, authentic frameshift

CBU1405

Conserved hypothetical protein, authentic frameshift

CBUA0009

Toxin, putative, degenerate

CBUA0030

TraI-related protein, authentic frameshift

CBUA0035

Ferripyochelin-binding protein, authentic frameshift