<div><p>Supplementary material for Overbeek <i>et al.</i> (1999) <i>Proc. Natl. Acad. Sci. USA </i><b>96</b>(6), 2896-2901.</p><h2>Glycogen Biosynthesis--with ids </h2><h3>Possible functional coupling between ORFs </h3><p align="CENTER"><a>View complete organism names</a></p><b><p align="CENTER">Functional Couplings </p></b><table border="BORDER" bordercolor="#000000" cellspacing=1><tr><td valign="MIDDLE"><p align="CENTER"><b> </b></p></td><td valign="MIDDLE"><b><p align="CENTER">AA </p></b></td><td valign="MIDDLE"><b><p align="CENTER">ST </p></b></td><td valign="MIDDLE"><b><p align="CENTER">PN </p></b></td><td valign="MIDDLE"><b><p align="CENTER">BS </p></b></td><td valign="MIDDLE"><b><p align="CENTER">CA </p></b></td><td valign="MIDDLE"><b><p align="CENTER">RC </p></b></td><td valign="MIDDLE"><b><p align="CENTER">EC </p></b></td><td valign="MIDDLE"><b><p align="CENTER">YP </p></b></td><td valign="MIDDLE"><b><p align="CENTER">HI </p></b></td><td valign="MIDDLE"><b><p align="CENTER">SS </p></b></td></tr><tr><td valign="MIDDLE"><b><p align="CENTER">2.4.1.1 glgP</p></b></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=AA&user=Maltsev&#38;contig=Aquifex_aeolicus&beg=481377&end=503452">RAA01502</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=ST&user=Maltsev&#38;contig=Contig253&beg=-8508&end=13753">RST00798</a>&nbsp;</p></td><td bgcolor="#ffff00" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=PN&user=Maltsev&#38;contig=4276&beg=-8356&end=13899">RPN01572</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=BS&user=Maltsev&#38;contig=BSUB9999&beg=3152816&end=3175209">RBS03088</a>&nbsp;</p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=RC&user=Maltsev&#38;contig=P2&beg=120122&end=142509">RRC00912</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=EC&user=Maltsev&#38;contig=Escherichia_coli_K12&beg=3551770&end=3574214">REC06482</a>&nbsp;</p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=HI&user=Maltsev&#38;contig=H.influenzae&beg=1433573&end=1456029">RHI10132</a>&nbsp;</p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td></tr><tr><td valign="MIDDLE"><b><p align="CENTER">2.4.1.25 dpeP</p></b></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=AA&user=Maltsev&#38;contig=Aquifex_aeolicus&beg=490629&end=512083">RAA01509</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=ST&user=Maltsev&#38;contig=Contig253&beg=-9778&end=11454">RST00797</a>&nbsp;</p></td><td bgcolor="#ffff00" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=PN&user=Maltsev&#38;contig=4276&beg=-9899&end=11615">RPN01571</a>&nbsp;</p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=HI&user=Maltsev&#38;contig=H.influenzae&beg=1424083&end=1446179">RHI06446</a>&nbsp;</p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td></tr><tr><td valign="MIDDLE"><b><p align="CENTER">2.7.7.27 glgC</p></b></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=PN&user=Maltsev&#38;contig=4232&beg=-7806&end=13333">RPN01331</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=BS&user=Maltsev&#38;contig=BSUB9999&beg=3157705&end=3178844">RBS03091</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=CA&user=Maltsev&#38;contig=CONTIG421&beg=-910&end=19836">RCA02208</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=RC&user=Maltsev&#38;contig=P2&beg=124710&end=145978">RRC02384</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=EC&user=Maltsev&#38;contig=Escherichia_coli_K12&beg=3555669&end=3576961">REC06007</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=YP&user=Maltsev&#38;contig=Contig1125&beg=-8915&end=12512">RYP00375</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=HI&user=Maltsev&#38;contig=H.influenzae&beg=1430482&end=1451780">RHI06451</a>&nbsp;</p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td></tr><tr><td valign="MIDDLE"><b><p align="CENTER">2.4.1.21 glgA</p></b></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=AA&user=Maltsev&#38;contig=Aquifex_aeolicus&beg=487374&end=508762">RAA01506</a>&nbsp;</p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=PN&user=Maltsev&#38;contig=4232&beg=-5538&end=15892">RPN01333</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=BS&user=Maltsev&#38;contig=BSUB9999&beg=3155199&end=3176650">RBS03089</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=CA&user=Maltsev&#38;contig=CONTIG421&beg=-3998&end=17453">RCA02205</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=RC&user=Maltsev&#38;contig=P2&beg=126015&end=147469">RRC02385</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=EC&user=Maltsev&#38;contig=Escherichia_coli_K12&beg=3554236&end=3575666">REC06006</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=YP&user=Maltsev&#38;contig=Contig1125&beg=-7420&end=13125">RYP00376</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=HI&user=Maltsev&#38;contig=H.influenzae&beg=1431891&end=1453318">RHI02863</a>&nbsp;</p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td></tr><tr><td valign="MIDDLE"><b><p align="CENTER">2.4.1.18 glgB</p></b></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=AA&user=Maltsev&#38;contig=Aquifex_aeolicus&beg=488740&end=510629">RAA01507</a>&nbsp;</p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=PN&user=Maltsev&#38;contig=4232&beg=-8833&end=12201">RPN01330</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=BS&user=Maltsev&#38;contig=BSUB9999&beg=3158844&end=3180724">RBS03092</a>&nbsp;</p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=RC&user=Maltsev&#38;contig=P2&beg=122523&end=144688">RRC02383</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=EC&user=Maltsev&#38;contig=Escherichia_coli_K12&beg=3558952&end=3581135">REC06009</a>&nbsp;</p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=HI&user=Maltsev&#38;contig=H.influenzae&beg=1426192&end=1448381">RHI06447</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=SS&user=Maltsev&#38;contig=gi|1707679|emb|Y08256|SS100KBFR&beg=5556&end=27241">RSS00811</a>&nbsp;</p></td></tr><tr><td valign="MIDDLE"><b><p align="CENTER">GLYCOGEN BIOSYNTHESIS <br> PROTEIN GLGD </p></b></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=PN&user=Maltsev&#38;contig=4232&beg=-6674&end=14462">RPN01332</a>&nbsp;</p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=CA&user=Maltsev&#38;contig=CONTIG421&beg=-2496&end=18640">RCA02206</a>&nbsp;</p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td></tr><tr><td valign="MIDDLE"><b><p align="CENTER">GLYCOGEN OPERON PROTEIN <br> GLGX HOMOLOG (EC 3.2.1.-) </p></b></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=HI&user=Maltsev&#38;contig=H.influenzae&beg=1428480&end=1450456">RHI02861</a>&nbsp;</p></td><td bgcolor="#00ffff" valign="MIDDLE"><p><a href="http://wit.mcs.anl.gov/WIT2/CGI/contig.cgi?org=SS&user=Maltsev&#38;contig=gi|1707679|emb|Y08256|SS100KBFR&beg=7410&end=29566">RSS00812</a>&nbsp;</p></td></tr></table><p></p><hr><b><p>Connection Matrix at 0.4 Clustering </p></b><table border="BORDER" bordercolor="#000000" cellspacing=1><tr><td valign="MIDDLE"><p align="CENTER"><b> </b></p></td><td valign="MIDDLE"><b><p align="CENTER">2.4.1.1 </p></b></td><td valign="MIDDLE"><b><p align="CENTER">2.4.1.25 </p></b></td><td valign="MIDDLE"><b><p align="CENTER">2.7.7.27 </p></b></td><td valign="MIDDLE"><b><p align="CENTER">2.4.1.21 </p></b></td><td valign="MIDDLE"><b><p align="CENTER">2.4.1.18 </p></b></td><td valign="MIDDLE"><b><p align="CENTER">GLYCOGEN BIOSYNTHESIS <br> PROTEIN GLGD </p></b></td><td valign="MIDDLE"><b><p align="CENTER">GLYCOGEN OPERON PROTEIN <br> GLGX HOMOLOG (EC 3.2.1.-) </p></b></td></tr><tr><td valign="MIDDLE"><b><p align="CENTER">2.4.1.1 </p></b></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">1.99 </p></td><td valign="MIDDLE"><p align="CENTER">2.22 </p></td><td valign="MIDDLE"><p align="CENTER">2.32 </p></td><td valign="MIDDLE"><p align="CENTER">2.32 </p></td><td valign="MIDDLE"><p align="CENTER">0 </p></td><td valign="MIDDLE"><p align="CENTER">0.21 </p></td></tr><tr><td valign="MIDDLE"><b><p align="CENTER">2.4.1.25 </p></b></td><td valign="MIDDLE"><p align="CENTER">1.99 </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">0 </p></td><td valign="MIDDLE"><p align="CENTER">0.73 </p></td><td valign="MIDDLE"><p align="CENTER">0.73 </p></td><td valign="MIDDLE"><p align="CENTER">0 </p></td><td valign="MIDDLE"><p align="CENTER">0 </p></td></tr><tr><td valign="MIDDLE"><b><p align="CENTER">2.7.7.27 </p></b></td><td valign="MIDDLE"><p align="CENTER">2.22 </p></td><td valign="MIDDLE"><p align="CENTER">0 </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">5.13 </p></td><td valign="MIDDLE"><p align="CENTER">3.47 </p></td><td valign="MIDDLE"><p align="CENTER">2.81 </p></td><td valign="MIDDLE"><p align="CENTER">0.42 </p></td></tr><tr><td valign="MIDDLE"><b><p align="CENTER">2.4.1.21 </p></b></td><td valign="MIDDLE"><p align="CENTER">2.32 </p></td><td valign="MIDDLE"><p align="CENTER">0.73 </p></td><td valign="MIDDLE"><p align="CENTER">5.13 </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">3.68 </p></td><td valign="MIDDLE"><p align="CENTER">2.36 </p></td><td valign="MIDDLE"><p align="CENTER">0.64 </p></td></tr><tr><td valign="MIDDLE"><b><p align="CENTER">2.4.1.18 </p></b></td><td valign="MIDDLE"><p align="CENTER">2.32 </p></td><td valign="MIDDLE"><p align="CENTER">0.73 </p></td><td valign="MIDDLE"><p align="CENTER">3.47 </p></td><td valign="MIDDLE"><p align="CENTER">3.68 </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">0.34 </p></td><td valign="MIDDLE"><p align="CENTER">4.77 </p></td></tr><tr><td valign="MIDDLE"><b><p align="CENTER">GLYCOGEN BIOSYNTHESIS <br> PROTEIN GLGD </p></b></td><td valign="MIDDLE"><p align="CENTER">0 </p></td><td valign="MIDDLE"><p align="CENTER">0 </p></td><td valign="MIDDLE"><p align="CENTER">2.81 </p></td><td valign="MIDDLE"><p align="CENTER">2.36 </p></td><td valign="MIDDLE"><p align="CENTER">0.34 </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td><td valign="MIDDLE"><p align="CENTER">0 </p></td></tr><tr><td valign="MIDDLE"><b><p align="CENTER">GLYCOGEN OPERON PROTEIN <br> GLGX HOMOLOG (EC 3.2.1.-) </p></b></td><td valign="MIDDLE"><p align="CENTER">0.21 </p></td><td valign="MIDDLE"><p align="CENTER">0 </p></td><td valign="MIDDLE"><p align="CENTER">0.42 </p></td><td valign="MIDDLE"><p align="CENTER">0.64 </p></td><td valign="MIDDLE"><p align="CENTER">4.77 </p></td><td valign="MIDDLE"><p align="CENTER">0 </p></td><td valign="MIDDLE"><p align="CENTER">--- </p></td></tr></table><p> </p></div>