Supplementary material for Overbeek et al. (1999) Proc. Natl. Acad. Sci. USA 96(6), 2896-2901.
Functional Couplings
| AA | DR | CY | PG | ST | PN | BS | CA | EF | ML | MT | NG | NM | PA | EC | YP | AG | TH | PF | PH | SS |
6.3.5.5 pyrAA | --- | --- | RCY30833 | RPG00931 | RST00234 | --- | RBS01553 | RCA02436 | REF01039 | RML00457 | RMT00439 | --- | --- | RPA00073 | REC00033 | RYP02499 | RAG47513 | RTH00655 | RPF01385 | --- | RSS00488 |
6.3.5.5 pyrAB | RAA01272 | --- | --- | RPG00932 | RST00233 | RPN00858 | RBS01552 | RCA02437 | REF01038 | RML00456 | RMT00693 | --- | --- | RPA00546 | REC00032 | RYP02498 | RAG01590 | RTH00010 | RPF01386 | --- | RSS00088 |
2.1.3.2 pyrB | RAA01271 | RDR00982 | --- | RPG01220 | RST00232 | RPN00859 | RBS01550 | RCA02900 | REF01036 | RML00454 | RMT00689 | RNG01306 | RNM01184 | RPA00853 | REC06496 | RYP03924 | RAG50088 | --- | RPF00084 | RPH00395 | --- |
2.1.3.2 pyrI | --- | --- | --- | RPG01221 | --- | --- | --- | RCA02899 | --- | --- | --- | RNG01307 | RNM01183 | --- | REC06392 | RYP03923 | RAG50086 | --- | RPF00085 | RPH00394 | --- |
3.5.2.3 pyrC | --- | --- | --- | --- | --- | --- | RBS01551 | --- | REF01037 | RML00455 | RMT00691 | --- | --- | RPA05076 | --- | --- | --- | --- | --- | --- | --- |
4.1.1.23 pyrF | --- | --- | --- | --- | --- | --- | --- | RCA02898 | --- | --- | RMT00406 | --- | --- | --- | --- | --- | --- | --- | --- | --- | --- |
PYRIMIDINE OPERON REGULATORY PROTEIN PYRR | --- | RDR00981 | RCY01603 | --- | --- | RPN00860 | RBS01548 | --- | REF01034 | --- | RMT00688 | --- | --- | RPA00855 | --- | --- | --- | --- | --- | --- | --- |
Connection Matrix at 0.4 Clustering
| 6.3.5.5 | 6.3.5.5(2) | 2.1.3.2 | 2.1.3.2(2) | 3.5.2.3 | 4.1.1.23 | PYRIMIDINE OPERON REGULATORY PROTEIN PYRR |
6.3.5.5 | --- | 20.5 | 1.63 | 0 | 0.76 | 0.02 | 1.46 |
6.3.5.5(2) | 20.5 | --- | 3.00 | 0 | 0.76 | 0.02 | 1.23 |
2.1.3.2 | 1.63 | 3.00 | --- | 10.8 | 2.55 | 0.43 | 3.17 |
2.1.3.2(2) | 0 | 0 | 10.8 | --- | 0 | 0 | 0 |
3.5.2.3 | 0.76 | 0.76 | 2.55 | 0 | --- | 0 | 1.50 |
4.1.1.23 | 0.02 | 0.02 | 0.43 | 0 | 0 | --- | 0 |
PYRIMIDINE OPERON REGULATORY PROTEIN PYRR | 1.46 | 1.23 | 3.17 | 0 | 1.50 | 0 | --- |