The use of gene clusters to infer functional coupling -- Overbeek et al. 96 (6): 2896 Data Supplement - Supplementary Algorithms and Examples -- Proceedings of the National Academy of Sciences

Supplementary material for Overbeek et al. (1999) Proc. Natl. Acad. Sci. USA 96(6), 2896-2901.

Algorithm 1
A simple procedure for forming groups of genes using pairs of bidirectional best hits (PCBBHs).
Algorithm 2
A procedure for clustering role groups.
Examples
Examples of reconstruction of some metabolic pathways using functional coupling.