Narendran et al. 10.1073/pnas.0607380103.

Supporting Tables

Files in this Data Supplement:

Supporting Table 1
Supporting Table 2




Table 1. Oligonucleotide primers and hybridization probes

Description

Sequence (5¢-3¢ )

Nested PCR

5¢ external proinsulin primer

GAAGAGGCCATCAAGCAGATCACT

5¢ internal proinsulin primer

ACCTGACCCAGCCGCAGCC

3¢ internal proinsulin primer

AGCTGGTAGAGGGAGCAGATG

5¢ external GAD65 primer

TGCTCCAAAGTGGATGTCAACTA

3¢ external GAD65 primer

ATGTTAGTATTTGCTGTTGATGTCA

5¢ internal GAD65 primer

CTTTGGCGTTTCTGCAAGAT

3¢ internal GAD65 primer

AGTTGTTTGGCAATGCATCA

5¢ external 21-OH primer

ACCTGTCCTTGGGAGACTAC

3¢ external 21-OH primer

TAGGCAGGCATTAAGTTGTCG

5¢ internal 21-OH primer

AGCCCACAAGAAGCTCACC

3¢ internal 21-OH primer

TGATCTTGTCTCCGAAGGTG

Real-Time (Lightcycler) PCR

5¢ native proinsulin primer

AGAGGCCATCAAGCACATCACT

3¢ native proinsulin primer

GGGTGTGTAGAAGAAGCCTCGT

5¢ splice variant proinsulin primer

TGCGTCAGATCACTGTCCTTC

FL-proinsulin hybridization probe

AACCAACACCTGTGCGGCTCAC

LC Red 640-proinsulin hybridization probe

CCTGGTGGAAGCTCTCTACCTAGTGTGC

5¢ 21-OH primer

ACACGGCCCAGCAGCA

3¢ 21-OH primer

GGAAGCGATCAGGCCAGAA

FL-21-OH hybridization probe

GGTTCGGAATGATGACTGTGCCC

LC Red 640-21-OH hybridization probe

CAGGGATGTCGTAGCCGGAGAT

5¢ PBGD primer

GCTGCAACGGCGGAA

3¢ PBGD primer

CCTGTGGTGGACATAGCAATGATT

FL-PBGD hybridization probe

TCGCATACAGACGGACAGTGTGGTG

LC Red 640-PBGD hybridization probe

CAACATTGAAAGCCTCGTACCCTGG





Table 2. si RNA sequences

siRNA no.

DNA sequence

1

Sense gcucucuaccuagugugcgTT

 

Antisense cgcacacuagguagagagcTT

2

Sense ggcuucuucuacacacccaTT

 

Antisense uggguguguagaagaagccTC

3

Sense gccuuugugaaccaacaccTT

 

Antisense gguguugguucacaaaggcTG

1 scrambled (negative control)

Sense cgucgucguacucauggucTT

 

Antisense gaccaugaguacgacgacgTT