Table 1. PCR primers used for mapping and analysis of the mouse Picalm gene
Gene/ marker |
Type* |
Forward primer |
Forward primer sequence |
Reverse primer |
Reverse primer sequence |
Product Size, bp |
M-09035 |
Genomic |
138 |
GCAGAAGGGAAGACAGTTGC |
139 |
AGCCGTGAAGAGAGGCATAA |
154 |
M-02716 |
Genomic |
140 |
TGTCGTGCCTTGCAATAGTC |
141 |
TGACAAGTCCTTCCTGGGTT |
189 |
D7Cwr11D |
Genomic |
40 |
TTTGTCAAAATTCAATCTCCT |
41 |
CAATCTTAGGGCAGAAATCA |
85 |
D7Mlk1 |
Genomic |
30 |
TGTGGCAGAGCAGACTGAAC |
33 |
AGGAATTCTCCAAGAACTGCCAGACATG |
345 |
D7Mlk2 |
Genomic |
44 |
GTAGTGAGAACTTGTGGTTTCCA |
45 |
TCGCTACTAAGGCCTAGCTTG |
145 |
Picalm |
cDNA |
396 |
AAGGGGTGGCGGACGAG |
146 |
CGCCAACTGTGGGATGTTC |
205 |
Picalm |
cDNA |
147 |
CCAAGAAAAAGCACCTGGAC |
148 |
TTTGAAGAGGAGCATGAAGG |
495 |
Picalm |
cDNA |
149 |
CCAAAATCAAATGGATGCAC |
150 |
TGCTTTTAAACGAGCCTGTTC |
499 |
Picalm |
cDNA |
151 |
GGGAAAAACAGGCAGCATTAG |
152 |
CAACATTAAGGCCAGCTGAAG |
498, 348† |
Picalm |
cDNA |
153 |
CCTTCTCCAGTTGCACAGC |
154 |
TGGTGGTCTCATGACAGG |
498, 483, 474, 459† |
Picalm |
cDNA |
155 |
CCTGTAATGACACAACCAACC |
156 |
TTTTATCCCCCAATGAATC |
489 |
Picalm |
Genomic |
181 |
GCTGGAATTTTAAGGGAAAAG |
182 |
GAATAAAGTTCTGTAGTTCACAAGG |
388 |
Picalm |
Genomic |
214 |
CCCTACCCACCCACTAAGAAG |
215 |
TGCCTGACAAAGACAGTCAATC |
415 |
*Genomic, primers used for analysis of genomic DNA or BAC clone; cDNA, primers used in RT-PCR analysis.
†
Sizes of the multiple RT-PCR products obtained from wild-type mice due to alternative splicing of the gene.