Supplementary material for Moran et al. (1999) Proc. Natl. Acad. Sci. USA 96 (19), 10699-10704.

Table 2.

Parameters of dimeric GCN4-p2¢ folding

Species

Equilibrium

Kinetics

-D

G°

m

°

R

T ln kf

R

T ln ku

-

mf

mu

-D

G° =

D

Gu-DGf

m

°
=

mu

- mf

Wild type

10.5

± 0.1

1.8

± 0.1

1.29

± 0.05

-2.53

± 0.12

0.93

± 0.04

0.72

± 0.03

10.2

± 0.1

1.6

± 0.1

D7G

8.7

± 0.2

1.8

± 0.1

1.10

± 0.09

-1.24

± 0.04

0.89

± 0.08

0.72

± 0.01

8.7

± 0.1

1.5

± 0.1

pD7A

9.4

± 0.1

1.6

± 0.1

1.16

± 0.08

-2.4

± 0.1

0.75

± 0.07

0.71

± 0.04

9.9

± 0.2

1.5

± 0.1

S14G

8.4

± 0.1

1.6

± 0.1

1.15

± 0.12

-1.47

± 0.04

0.90

± 0.09

0.61

± 0.01

9.0

± 0.1

1.5

± 0.1

S14A

10.6

± 0.6

1.7

± 0.2

1.43

± 0.05

-3.15

± 0.10

0.95

± 0.03

0.78

± 0.03

10.9

± 0.1

1.7

± 0.04

A24G

8.5

± 0.2

2.0

± 0.1

0.33

± 0.11

-1.05

± 0.05

0.60

± 0.13

0.85

± 0.016

7.8

± 0.1

1.45

± 0.13

AAA

11.3

± .05

1.89

± .02

1.70

± 0.05

-2.54

± 0.13

1.12

± 0.03

0.69

± 0.03

10.6

± 0.1

1.8

± 0.1

GGG

5.97

± 0.02

1.95*

ND

-0.31

± 0.18†

ND

0.86

± 0.06†

ND

ND

TTT

9.00

± 0.02

2.13

± 0.01

0.54

± 0.10

-2.03

± 0.14

1.17

± 0.12

0.87

± 0.04

8.96

± 0.17

2.04

± 0.13

AAG

9.34

± 0.01

1.99

± 0.01

1.28

± 0.08

-1.48

± 0.06

0.95

± 0.06

0.96

± 0.02

9.2

± 0.1

1.91

± 0.06

All values extrapolated to zero denaturant concentration. The DG° values are referenced to 1 M standard state peptide concentration. Units of DG° and RT are kcal/mol. Units of m are kcal/mol per M. Observed second-order folding rates referenced to 5.5 mM peptide concentration. ND, not determined.

*Obtained from equilibrium denaturation measurement conducted in 5% 2,2,2-trifluroethanol.

Measured in 5% 2,2,2-trifluroethanol, which has been shown to have no effect on unfolding rates [Kentsis, A. & Sosnick, T. R. (1998) Biochemistry 37, 14613-14622].