Supplementary material for Moran et al. (1999) Proc. Natl. Acad. Sci. USA 96 (19), 10699-10704.
Table 3.
Parameters of crosslinked GCN4-p2¢ folding
Species | Equilibrium | Kinetics | ||||||
-D G° | m° | R T ln kf | R T ln ku | - mf | mu | -D G° = D Gu - D Gf | m° =mu - mf | |
Wild type | 8.9 ± 0.4 | 1.6 ± 0.1 | 5.0 ± 0.1 | -4.5 ± 0.4 | 0.79 ± 0.05 | 0.98 ± 0.06 | 9.5 ± 0.4 | 1.77 ± 0.08 |
D7A | 9.75 ± 0.44 | 1.84 ± 0.08 | 5.7 ± 0.1 | -4.7 ± 0.3 | 0.78 ± 0.03 | 1.03 ± 0.06 | 10.4 ± 0.3 | 1.81 ± 0.09 |
D7G | 8.1 ± 0.21 | 1.77 ± 0.05 | 5.3 ± 0.1 | -2.6 ± 0.3 | 1.11 ± 0.05 | 0.74 ± 0.05 | 7.9 ± 0.3 | 1.85 ± 0.07 |
S14A | 11.4 ± 0.06 | 1.98 ± 0.01 | 5.6 ± 0.1 | -4.6 ± 0.3 | 0.83 ± 0.02 | 0.95 ± 0.05 | 10.2 ± 0.3 | 1.78 ± 0.05 |
A24G | 6.5 ± 0.1 | 1.59 ± 0.02 | 5.1 ± 0.3 | -1.0 ± 0.4 | 0.81 ± 0.05 | 0.76 ± 0.08 | 6.1 ± 0.5 | 1.57 ± 0.09 |
AAG | 6.8 ± 0.1 | 1.56 ± 0.02 | 6.7 ± 0.2 | -0.8 ± 0.2 | 1.14 ± 0.06 | 0.67 ± 0.04 | 7.5 ± 0.3 | 1.81 ± 0.07 |
GGG | 4.4 ± 0.03 | 1.9 ± 0.01 | 4.6 ± 0.2 | -0.1 ± 0.2 | 1.3 ± 0.14 | 0.74 ± 0.07 | 4.7 ± 0.3 | 2.04 ± 0.16 |
TTT | ND | ND | 4.8 ± 0.1 | -2.7 ± 0.2 | 0.96 ± 0.03 | 0.80 ± 0.03 | 7.5 ± 0.2 | 1.76 ± 0.03 |
AAA | 11.1 ± 0.1 | 1.97 ± 0.01 | 5.8 ± 0.2 | -4.8 ± 0.6 | 0.87 ± 0.04 | 0.98 ± 0.09 | 10.7 ± 0.7 | 1.85 ± 0.10 |
The DG° values and activation energies (units of kcal/mol) are extrapolated to zero denaturant. Units of m are kcal/mol per M. ND, not determined.