10.1073/pnas.0704350104 |
Fig. 3. Photographs of experimental layout. (A) Experimental pond array. Drain pipe for implemented drought can be seen on the pond in the center. (B) Mesocosm during imposed drought to show how pond drying was achieved.
Table 1. Comparison of permutation ANOVA (PERMANOVA) and permutation distribution (PERMDIST) among similarity metrics
Functional group and similarity statistic | PERMANOVA | PERMDISP | ||
F ratio | P value | F ratio | P value | |
All Species | ||||
Jaccards | 2.13 | 0.001 | 34.07 | 0.001 |
Sorensen | 2.94 | 0.001 | 50.11 | 0.001 |
Chao-Jaccard | 5.75 | 0.001 | 93.64 | 0.001 |
Chao-Sorensen | 6.75 | 0.001 | 162.65 | 0.001 |
Bray-Curtis | 3.14 | 0.002 | 86.93 | 0.001 |
Plants | ||||
Jaccards | 6.86 | 0.001 | 39.49 | 0.001 |
Sorensen | 8.33 | 0.001 | 71.09 | 0.001 |
Chao-Jaccard | 8.33 | 0.001 | 428.84 | 0.001 |
Chao-Sorensen | 8.33 | 0.001 | 479.66 | 0.001 |
Bray-Curtis | 4.80 | 0.002 | 116.51 | 0.001 |
Zooplankton | ||||
Jaccards | 1.74 | 0.002 | 5.03 | 0.031 |
Sorensen | 2.010 | 0.001 | 6.36 | 0.020 |
Chao-Jaccard | 3.57 | 0.002 | 9.99 | 0.006 |
Chao-Sorensen | 4.19 | 0.001 | 15.41 | 0.002 |
Bray-Curtis | 1.87 | 0.001 | 11.31 | 0.006 |
Herbivores | ||||
Jaccards | 1.68 | 0.046 | 5.61 | 0.027 |
Sorensen | 2.21 | 0.001 | 9.67 | 0.003 |
Chao-Jaccard | 3.74 | 0.001 | 7.65 | 0.015 |
Chao-Sorensen | 4.97 | 0.001 | 9.56 | 0.010 |
Bray-Curtis | 2.54 | 0.001 | 4.96 | 0.039 |
Predators | ||||
Jaccards | 1.31 | 0.025 | 11.79 | 0.003 |
Sorensen | 1.52 | 0.023 | 15.56 | 0.001 |
Chao-Jaccard | 1.37 | 0.031 | 3.89 | 0.064 |
Chao-Sorensen | 1.60 | 0.031 | 5.18 | 0.037 |
Bray-Curtis | 1.32 | 0.007 | 3.17 | 0.087 |
SI Text
Comparing compositional similarity through time.
Over the final 2 years of the experiment, I tested the similarity in community structure in each pond from one year to the next. This allowed me to determine whether pond communities were in flux or whether they had stabilized, such that analyses of the final year would be able to allow me to address my hypotheses. In each year, I calculated the similarity metrics of each pond between the final 2 years of the experiment by using the metrics discussed above. For each treatment, similarity was not statistically different from 1 or from the other treatment (t tests: P > 0.2), indicating that community structure was relatively stable in each pond over the final years of the experiment, and that the treatments did not vary in their degree of change.