Kim et al. 10.1073/pnas.0708644104. |
SI Text
A matching algorithm was used to select equally sized populations of place
cells from stress and control conditions that had nearly identical firing properties
during session 1. Place cells from control (n = 54) and stress (n = 46) conditions
were assembled into two separate lists and sorted in ascending order of their
spatial information values (bits per second). An index variable for parsing the lists was set
to i = 1, and the following steps were performed. Step 1: If the values at position i
in each list differed by 0.75 bits per second or less, then both of the cells at position i were
kept in the data set (for the time being); i was incremented by 1 and step 1 was
repeated for the next pair of cells. If the values at position i differed by more than
0.75 bits per second, then step 2 was invoked. Step 2: The list containing the smallest
information value at position i was designated as the "deletion list" for this
iteration of the algorithm. If deleting the cell at i-1 (and shifting the remaining cells
upward) caused the new cell pair at i-1 to differ from each other by more than
0.75 bits per second, then the value at i was deleted, the values below were shifted upward
to fill the gap, and step 1 was repeated without incrementing i. If deleting the cell
at i-1 (and shifting the remaining cells upward) did not cause the new cell pair at
i
-1 to differ by more than 0.75 bits per s, then the cells at i-2, i-3, etc. of the deletionlist were checked until a cell was found at position i-b that could not be deleted
without causing the new cell pair at i-b of the two lists to differ by more than 0.75
bits per second. One of the cells between positions i-b+1 and i was then chosen for
deletion; the chosen cell was the one that, when deleted, would result in the
smallest difference in mean place field sizes between the two lists. After deleting
this cell, the cells below were shifted upward and step 1 was repeated without
incrementing i. Step 3: The matching procedure was terminated when both lists
contained equal numbers of cells and no pair of cells in the same list position had
spatial information values that differed by more than 0.75 bits per second.