A multitude of genes expressed solely in meiotic or postmeiotic spermatogenic cells offers a myriad of contraceptive targets -- Data Supplement - HTML Page - 5054Table4.htslp -- Proceedings of the National Academy of Sciences

Table 4.
Genes from clusters 1–5 with unassigned or unknown function found only in the testis (Unigene database)

Affymetrix probe id	Unigene id	Cluster	Predicted function /domains*	SP/TM	*Confirmed by in situ* hybridization**	Confirmed by qRT-PCR
169602_f_at	Mm.117198	1	protease
167607_at	Mm.142735	1
169081_at	Mm.159029	1
167788_at	Mm.159154	1	MAGE
169574_at	Mm.159333	1
131914_at	Mm.188575	1
166295_f_at	Mm.212736	1
113853_at	Mm.22851	1
128554_at	Mm.248012	1
163896_at	Mm.249997	1	ER lumen protein retaining receptor	2 TM
162654_at	Mm.26189	1
133985_at	Mm.33633	1
165833_at	Mm.45462	1
165890_at	Mm.46124	1
165891_i_at	Mm.46128	1
161065_at	Mm.5349	1	protease	SP
167393_r_at	Mm.55950	1		TM
169326_f_at	Mm.63867	1
169687_at	Mm.69406	1
167791_at	Mm.78654	1
167928_at	Mm.84264	1		TM
167386_at	Mm.108732	2
166585_at	Mm.11439	2
168263_f_at	Mm.116959	2	citrate synthase	SP
165463_at	Mm.154333	2
166324_at	Mm.158195	2
167503_i_at	Mm.177848	2
165595_at	Mm.189648	2	protease	SP
108884_at	Mm.192221	2
168637_f_at	Mm.232593	2	MARVEL	4 TM
106254_at	Mm.23791	2
168050_at	Mm.250451	2
116993_at	Mm.251410	2
133351_at	Mm.25846	2		4 TM
165436_r_at	Mm.26987	2	poly A binding
166381_f_at	Mm.32219	2		7 TM
117078_at	Mm.33196	2
134003_at	Mm.33684	2
164130_at	Mm.40023	2
163005_s_at	Mm.45373	2
166239_f_at	Mm.45463	2
167012_at	Mm.45470	2
167057_i_at	Mm.45616	2	ubiquitin conjugating enzyme
163024_at	Mm.46106	2	Kazal	SP
163728_at	Mm.46140	2
165895_at	Mm.46142	2
165896_i_at	Mm.46144	2
171333_at	Mm.50085	2
168134_f_at	Mm.50108	2
166036_f_at	Mm.50853	2
168573_at	Mm.54267	2
170147_r_at	Mm.54292	2		TM
170426_f_at	Mm.63782	2
100965_at	Mm.660	2
167533_at	Mm.66809	2		TM
167538_at	Mm.66949	2
166156_f_at	Mm.67665	2
166172_f_at	Mm.71094	2		3 TM
166192_at	Mm.74465	2
166237_f_at	Mm.78558	2
166251_f_at	Mm.79179	2	transferase
168650_at	Mm.82793	2
167929_at	Mm.84275	2
167931_f_at	Mm.84314	2
101839_at	Mm.84934	2	protease	SP
165522_r_at	Mm.84977	2
166336_at	Mm.87044	2
163996_at	Mm.87382	2
135057_at	Mm.87734	2
168235_at	Mm.159080	3
168773_at	Mm.159449	3
167647_r_at	Mm.171293	3
129081_at	Mm.17612	3
138191_f_at	Mm.177680	3
108798_at	Mm.23366	3
114203_at	Mm.23521	3
165593_at	Mm.23534	3	Tektin	SP
164281_at	Mm.250814	3
133837_at	Mm.27514	3
166690_i_at	Mm.32241	3
114762_at	Mm.33646	3
163496_i_at	Mm.35644	3				also in ovary
136175_at	Mm.39873	3
139287_at	Mm.44817	3
107927_at	Mm.45587	3
167125_i_at	Mm.45821	3		4 TM
167128_r_at	Mm.45825	3
165893_f_at	Mm.46132	3
165888_f_at	Mm.46155	3				+
168783_f_at	Mm.48850	3
167645_f_at	Mm.48860	3	CD20/IgE Fc receptor	2 TM
114204_at	Mm.50600	3		SP/TM
167351_f_at	Mm.52646	3
163836_at	Mm.55669	3	sugar transporter	8 TM
165881_f_at	Mm.60992	3
167509_i_at	Mm.65550	3
116502_at	Mm.67234	3		2 TM
166151_f_at	Mm.67562	3
167654_i_at	Mm.72785	3
167662_r_at	Mm.73086	3
163094_at	Mm.78624	3
136447_at	Mm.83569	3
129903_at	Mm.84307	3
167961_r_at	Mm.85037	3
166359_at	Mm.87331	3
166366_r_at	Mm.87354	3
166367_at	Mm.87355	3
168262_at	Mm.87419	3	protease	TM	+	+
168254_at	Mm.109099	4				also in lung, ovary
165480_i_at	Mm.141451	4	calmodulin-binding			+
138799_at	Mm.158111	4	intermediate filament			+
168138_at	Mm.158149	4				+
170417_at	Mm.158159	4
169972_at	Mm.159092	4				+
167317_f_at	Mm.177847	4				+
166378_at	Mm.179421	4
115716_at	Mm.19977	4	protease	SP
115733_at	Mm.20221	4	histone-like			also in brain, heart
103632_at	Mm.20314	4	HMG group
168056_at	Mm.229259	4
163176_at	Mm.22956	4				+
131857_at	Mm.23382	4
168047_at	Mm.233840	4		TM		+
165592_r_at	Mm.23518	4				+
162601_i_at	Mm.23887	4	histone-like			+
107780_at	Mm.260945	4
114961_at	Mm.26988	4	lysozyme	SP		+
165439_at	Mm.27023	4				+
162777_at	Mm.29788	4
115963_at	Mm.30957	4	protease	SP
116183_at	Mm.31410	4				+
116186_at	Mm.31415	4				+
165661_i_at	Mm.32231	4
163401_at	Mm.32245	4				+
166730_at	Mm.33624	4
114760_at	Mm.33629	4		SP		+
166731_at	Mm.33647	4
114763_at	Mm.33683	4
114785_at	Mm.33811	4
163449_at	Mm.33864	4
105042_at	Mm.34841	4				+
165822_f_at	Mm.45302	4		SP	+	+
165824_at	Mm.45306	4	electron transporter	4 TM	+	+
163006_at	Mm.45377	4	sterol carrier			+
165831_at	Mm.45442	4				+
164171_at	Mm.45611	4			+	+
165857_at	Mm.45820	4		TM
165474_f_at	Mm.45824	4				+
165860_at	Mm.45831	4				+
165889_f_at	Mm.46121	4			+	+
163729_at	Mm.46146	4	histone-like
165900_f_at	Mm.46151	4			+	+
165486_i_at	Mm.46159	4	Ring finger			+
163032_at	Mm.46166	4				+
165487_f_at	Mm.46167	4	cystatin-like	SP		+
167439_at	Mm.46170	4
167318_i_at	Mm.50087	4				+
163819_at	Mm.50982	4				+
171461_f_at	Mm.52671	4				+
166061_f_at	Mm.55870	4	Phosphate acyltransferase, EF-hand, calcium binding	TM		+
166108_r_at	Mm.56430	4	HMG group			+
166073_at	Mm.56501	4	protease associated, Ring finger	SP	+	+
167423_f_at	Mm.59225	4
166097_at	Mm.60688	4
166104_f_at	Mm.61148	4
166147_f_at	Mm.67211	4
166191_f_at	Mm.72892	4				+
166195_f_at	Mm.73222	4				+
167775_r_at	Mm.78172	4
167780_i_at	Mm.78368	4	ARM repeat			+
163921_at	Mm.78390	4				+
166244_f_at	Mm.78873	4
166249_r_at	Mm.79053	4
167888_at	Mm.82810	4
167924_at	Mm.84066	4				+
167943_f_at	Mm.84522	4			+
110607_at	Mm.86429	4
166326_at	Mm.86808	4				+
168146_at	Mm.87067	4
166368_at	Mm.87357	4	electron transporter
166371_i_at	Mm.87369	4	ribonuclease inhibitor
166385_i_at	Mm.87418	4
168231_at	Mm.87431	4
164008_at	Mm.87446	4				also in lung
166397_at	Mm.87455	4
164787_at	Mm.157047	5
171469_r_at	Mm.158268	5		3 TM
169165_i_at	Mm.159335	5
168253_f_at	Mm.183467	5
168592_at	Mm.195787	5	protease
108744_at	Mm.23033	5		SP
161224_f_at	Mm.232542	5
165590_i_at	Mm.23510	5
165591_f_at	Mm.23516	5				+
163733_at	Mm.249241	5
134551_i_at	Mm.250837	5
166355_f_at	Mm.251374	5
115582_at	Mm.30493	5
162827_at	Mm.33194	5
136151_at	Mm.35312	5
171254_r_at	Mm.45304	5		TM
165834_r_at	Mm.45466	5	DNA binding
164176_at	Mm.45773	5
167124_at	Mm.45819	5
165883_r_at	Mm.46096	5
167848_at	Mm.50263	5
166026_r_at	Mm.50337	5
132023_at	Mm.50361	5
169155_f_at	Mm.50369	5
136448_at	Mm.50904	5
167346_f_at	Mm.52575	5
167349_i_at	Mm.52613	5
99400_at	Mm.56997	5		SP
166083_i_at	Mm.57614	5
167531_i_at	Mm.60359	5
167537_at	Mm.66946	5
163877_at	Mm.67455	5
166154_f_at	Mm.67595	5
163081_at	Mm.67639	5
165901_f_at	Mm.71110	5
167602_i_at	Mm.71153	5
167605_i_at	Mm.71176	5
170163_at	Mm.71904	5
130175_at	Mm.71906	5
166193_at	Mm.72970	5			+	+
167659_at	Mm.73124	5
167699_at	Mm.75060	5
170614_at	Mm.78473	5
133077_at	Mm.81032	5				+
167939_s_at	Mm.84467	5
167954_at	Mm.84810	5
163973_at	Mm.86986	5
166390_at	Mm.87434	5

A signal peptide (SP) or transmembrane segment (TM) was predicted by using signalp, Ver. 2.0 (www.cbs.dtu.dk/services/SignalP-2.0); potential functional domains were assigned on the basis of gene ontology information (netaffx), smart (http://smart.embl-heidelberg.de), and scanprosite (http://us.expasy.org/tools/scanprosite). HMG, high-mobility group; Kazal, serine protease inhibitor; ARM, Armadillo/beta-catenin-like repeats; MAGE, Similar to Melanoma Antigen family; MARVEL, domain involved in membrane apposition events.