Arterial calcifications and increased expression of vitamin D receptor targets in mice lacking TIF1α

Ignat et al. 10.1073/pnas.0712030105.

Supporting Information

Files in this Data Supplement:

SI Table 3
SI Figure 4
SI Figure 5
SI Text
SI Table 4




Fig. 4. The TIF1a protein is detected in a large number of epithelia and the uterine stroma. Immunolocalization of TIF1a using a specific mAb (red nuclear signals). (A, C, D, E, G, I, J, and K ) Tissues from WT mice. (B, F, H, and L) Tissues from TIFa-/- mutants, serving as negative controls of the immunostaining procedure. The right side of each panel is a Photoshop-generated superimposition of the immunofluorescent signal shown in A (red), the DAPI nuclear counterstain (blue), and the tissue autofluorescence (green). CC, colonic crypts; EnP and ExP, endocrine and exocrine pancreas, respectively; EO, epithelium of the oviduct; F, ovarian follicle; G, uterine glands; L, epididymal lumen; SE, seminiferous epithelium; ST, uterine stroma. Note that the signal in the lumen of some blood vessels (asterisks) is unspecific and reflects the binding of the secondary anti-mouse Cy3-conjugated IgG to circulating immunoglobulins. (Scale bar: A, B, D, I, J, K, and L, 80 mm; C, E, F, G, and H, 25 mm.)





Fig. 5. Examples of intranuclear inclusions in hepatocytes of 3-month-old TIF1a-/- mutants. (A and B) Hematoxylin/eosin stain. (C) Electron-microscopic image. Intranuclear inclusions (yellow arrowheads) are invaginations of the cytoplasm (CY) into the nucleus (N). Note that at this age livers of TIF1a-/- mutants do not yet display signs of neoplastic transformation. (Scale bar: A and B, 40 mm; C, 1 mm.)





Table 3. Hematological parameters in WT (TIF1a+/+) and TIF1a-/- mice (means ± SD) at the age of 8 months

Parameter

Female mice

Male mice

WT

TIF1α

WT

TIF1α

White blood cell, x103/μl

8.70 ± 3.77

7.15 ± 0.71

8.72 ± 2.49

10.44 ± 2.35

Red blood cell, x106/ μl

9.95 ± 0.26

9.60 ± 0.42

9.80 ± 1.01

10.19 ± 0.63

Hemoglobin, g/dl

15.92 ± 0.68

15.18 ± 0.77

15.76 ± 1.11

16.10 ± 0.90

Hematocrit, %

45.82 ± 2.31

43.73 ± 2.52

45.64 ± 3.29

47.04 ± 3.02

Mean cell volume, fl

46.07 ± 2.29

45.58 ± 1.02

46.70 ± 1.92

46.14 ± 0.87

MCH, pg

15.98 ± 0.62

15.83 ± 0.24

16.12 ± 0.64

15.80 ± 0.43

MCHC, g/dl

34.72 ± 0.69

34.70 ± 0.62

34.54 ± 0.11

34.26 ± 0.59

Platelets, x103/μl

1,386.33 ± 299.82

1,517.75 ± 146.31

1,658.00 ± 183.61

1.701.80 ± 54.84

n = 5 mice of each genotype and gender. MCH, mean corpuscular hemoglobin; MCHC, mean cell hemoglobin concentration.





Table 4. Primer sequences

Gene (GenBank accession no.)

Forward primer

Reverse primer

Calb1 (NM_009788)

CTTCATCGAAACCGAGGAAC

TGTCAGTTCCAGCTTTCCGT

Abcc6 (NM_018795)

CTTTGCCACCTTTCTGATCC

CACAGTGTTGATTCCTGGCA

Car2 (NM_009801)

ATGGATTGGCTGTTTTGGGC

AGTTTCCAGGAAGAAGGGAG

Cyp24a1 (NM_009996)

TGGCAGAGTACCACAAGAAG

GCTTTCCAGGGTTTGATCTC

Epo (NM_007942)

GTACATCTTAGAGGCCAAGG

CCTGTTCTTCCACCTCCATT

Hprt (NM_013556)

TGACACTGGTAAAACAATGCA

GGTCCTTTTCACCAGCAAGCT

Pthlh (NM_008970)

ACTGCATGACAAGGGCAAGT

TTGGGAGCAGGTTTGGAGTT

Raldh3 (NM_053080)

CGGGTGTGGTGAACATTGTA

AGCTTTCCAACCTCTGTGGA

S100g (NM_009789)

GATTCAGTCAGAGTTCCCCA

TGGTTCTCCTTCTTCCTGAC

Spp1 (NM_009263)

CTCACCATTCGGATGAGTCT

CTGTGGCATCAGGATACTGT

Trpv5 (NM_001007572)

CTTTGGGCCCCTAACATCTT

CTTCACTGGGGTCTGTTCTA

Trpv6 (NM_022413)

GAGGCTGCAATGGTGCTAAT

GAGCACGGACCAAGTTTACA

Wt1 (NM_144783)

TTAAAGGGAATGGCTGCTGG

CCGTGGGTGTGTATTCTGTA





SI Text

Alizarin Red Staining of Mouse Skeletal Preparations

The mice were killed. The skin of the trunk, head, and limbs was removed. The ventral abdominal wall was incised. With forceps all thoracic and abdominal viscera were removed through this incision. The viscera were fixedx overnight in 95% ethanol containing 1% acetic acid (vol/vol) at room temperature. Soft tissues were cleared in 2% KOH for 12 h with two changes or, alternatively, in 1% KOH for 48 h. Bone was stained in alizarin red solution (alizarin red sodium sulfonate; CI: 58 005; Sigma; 75 mg alizarin red in 1 liter of 1% KOH) overnight; the solution can be kept for several weeks at room temperature. It was distained in 20% glycerol, 1% KOH for 7 days, and the solution was changed every day. The remaining soft tissues was dissected away if required and transferred in 20% glycerol, 20% ethanol for 1 week. Then it was transfer in 20% glycerol, 50% ethanol overnight then to 100% glycerol for storage.

Immunohistochemistry

Organs from 4-month-old WT mice and TIF1a-/- mutants were perfusion-fixed with 4% (wt/vol) paraformaldehyde (PFA) in PBS and maintained in the same fixative for 16 h at 4°C (1). Sections (3 mm thick) were dewaxed, hydrated, and rinsed in PBS (pH 7.2) then placed into 10 mM sodium citrate buffer, pH 6.0 and exposed to a microwave treatment (power output 800 W; two times 10 min). After cooling down to room temperature, sections were rinsed in PBS containing 0.1% (vol/vol) Tween 20 (PBST; three times for 5 min each at 20°C), and incubated for 16 h at 4°C in a humidified chamber with the anti-TIF1a mAb 5T1E8 purified from ascites fluid (working dilution: 10 mg/ml). Detection of the bound primary antibodies was achieved for 45 min at 20°C in a humidified chamber, using a Cy3-conjugated goat anti-mouse IgG (diluted 1/300; Jackson ImmunoReseach). Nuclei were counterstained with DAPI (Roche Diagnostics) diluted at 10 mg/ml in the mounting medium (Vectashield; Vector). Histological sections from age- and sex-matched TIF1a-/- mutants were used to confirm the specificity of the anti-TIF1a antibody immunostaining.

1. Mark M, et al. (2007) in Current Protocols in Molecular Biology, ed Ausubel FM, et al. (Wiley, New York), pp 1-32.