Wang et al. 10.1073/pnas.0712365105.

Supporting Information

Files in this Data Supplement:

SI Figure 6
SI Figure 7
SI Figure 8
SI Figure 9
SI Materials and Methods
SI Table 1
SI Table 2




SI Figure 6

Fig. 6. Treatment with ATI alleviates splenomegaly and hepatomegaly, revealed by evaluation of the weight of spleens (A) and livers (B).





SI Figure 7

Fig. 7. ATI induces terminal differentiation of leukemic cells expressing PML-RARa in vivo, as revealed by morphological examination.





SI Figure 8

Fig. 8. ATI treatment alleviates infiltration and dissemination of leukemic cells in bone marrow (Top), spleen (Middle), and liver (Bottom) and prevents destruction of tissue architectures.





SI Figure 9

Fig. 9. Immunofluorescence analysis of the subcellular localization of PML-RARa/PML in NB4 and NB4-R2 cells treated with protocols indicated, and leukemic cells from APL mice treated with regimens indicated.





SI Materials and Methods

Agents

As4S4 was dissolved in 0.1 N sodium hydroxide to make a stock solution of 0.5 mM. T and I were dissolved in DMSO. Nitroblue tetrazolium (NBT), propidium iodide (PI), and dithiothreitol (DTT) were purchased from Sigma. Anti-RARa, PML, C/EBPa, C/EBPb, C/EBPe, PU.1,C-Myc, CDK2, Rb, P27, P21, Cyclin D1, horseradish peroxidase-conjugated goat anti-mouse IgG, and goat anti-rabbit IgG were obtained from Santa Cruz Biotechnology. Underphosphorylated Rb monoclonal antibody was from BD Biosciences, anti-AQP9 antibody from Chemicon, anti-b-actin antibody from Abcam, while Alexa Fluor 488 donkey anti-rabbit IgG antibody was obtained from Molecular Probes. The chemiluminescence phototope-horseradish peroxidase kit was from Cell Signaling.

Knockdown of AQP9 by RNA interference (RNAi)

Four RNAi candidate target sequences to human AQP9 (SI Table 2) were designed following the procedure of Dharmacon siDESIGN center, and were cloned into pFIV-H1/U6-copGFP vector. AQP9-Si1 (SI Table 2) had the best interference efficiency in 293T cells cotransfected with AQP9 and siRNA expression constructs revealed by Western blot and immunofluorescence assays and was selected to knockdown the endogenous AQP9 in NB4 cells. Nonsilencing (NS)-siRNA was used as a control. The oligonucleotides encoding the AQP9-Si1 or NS-siRNA sequence and a loop sequence separating the complementary domains, were synthesized and inserted into the pGCL-GFP (Shanghai GeneChem). The recombinant virus was packaged using Lentivector Expression Systems (Shanghai GeneChem). NB4 cells were infected by Enhanced infection solution and cultured in RPMI-1640 medium containing 10% FBS. After 1 week, GFP-positive cells were sorted by Moflow (DakoCytomation). Experiments were performed with sorted GFP+ cells (purity, >97%).

Statistical Analysis

Variance between the treatment groups was measured by two-tailed t test. Survival functions were estimated by using the Kaplan--Meier method and compared by the log-rank test. P<0.05 was considered statistically significant. All statistical analyses were performed on SAS 8.2 software (SAS Institute).





Table 1. Summary of primer sequences

Primer name

Sequence

C/EBPa-forward

AAGGCCAAGAAGTCGGTGGA

C/EBPa-reverse

CAAGCCTCGAGATCCGGCGA

C/EBPb-forward

ACAGCGACGAGTACAAGATCC

C/EBPb-reverse

GCAGCTGCTTGAACAAGTTCC

C/EBPe-forward

GAATTCAGCCGAGGCAGCTACAATC

C/EBPe-reverse

GGATCCTCACAGTGCAACTTTATTC

PU.1-forward

CAACGCCAAACGCACGAGTA

PU.1-reverse

CTTGTCCACCCACCAGATGCT

P27-forward

ACGTGCGAGTGTCTAACGGGAGC

P27-reverse

GTCCATTCCATCTTCAGAGCGA

C-myc-forward

TTTGCACTGGAACTTACAACACC

C-myc- reverse

CCTCCTCGTCGCAGTAGAAAT

GAPDH-forward

TCACCAGGG CTGCTTTTA

GAPDH-reverse

AAGGTCATCCCTGAGCTGAA

RARb2-forward

GATCGTGGAGTTTGCTAAACG

RARb2-reverse

CAGAGGACCAAATCCAGCAT

RARb2 (CHIP)-forward

TCCTGGGAGTTGGTGATGTCAG

RARb2 (CHIP)- reverse

AAACCCTGCTCGGATCGCTC

AQP9-forward

GGAGGGGTCATCACTATCAAT

AQP9-reverse

ACAGGAATCCACCAGAAGT





Table 2. RNAi candidate target sequences for AQP9

Sequence name

Sequence (5'-3')

NS-siRNA

TTCTCCGAACGTGTCACGT

AQP9-Si1

GAGCAGCTTAGCGAAAGAA

AQP9-Si2

CTGCTGATCGTGGGAGAAA

AQP9-Si3

GAACGCATTTGCAGATCAA

AQP9-Si4

CAATCTGAGGACAAACCAG