This file contains a list of COGs in the following format:
CSN_COG#_one line description of COG members
Average identity between core members (genes that are members due to congruent BeTs)
List of genes in COG core in this format:
[Virus_#gene number] [the sequence's PID number] [Genbank annotation] [add. annotation (op.)]
Average identity to the core members of the additional members
List of genes that are Additional Members of the COG
(due to non-congruent BeTs to Core members) Same format as core.
The COG# assigned each COG is arbitrary and not related to the number assigned any similar COGs at other CSNs. The "gene number" after the "#" was assigned for internal reference purposes.
COG Stringency Number for cores is 5
COG Stringency Number for addition is 5
5_1_Large subunit of Ribonucleotide Reductase
Core Members : Average percent Identity : 20.6603257575758
EHV1_#21 gi|330813 ribonucleotide reductase RR1
EHV2_#62 gi|695234 ribonucleotide reductase, large subunit
EHV4_#21 gi|2605964 21
HCMV_#59 gi|1780823 Homology to large subunit of ribonucleotide reductase
HSV1_#42 gi|59539|gnl|PID|e312354 ribonucleotide reductase large subunit
HSV2_#42 gi|1869862|gnl|PID|e304181 ribonucleotide reductase large subunit
VZV_#19 gi|60008 ORF19 (AA1-775)
EBV_#23 gi|1334856 BORF2 early reading frame, 2 NXT/S.ribonucleotide
HHV6_#38 gi|854007 U28, RR1
HHV7_#33 gi|1139630 ribonucleotide reductase, large subunit
MHV68_#59 gi|2317993 ribonucleotide reductase large
HVS2_#62 gi|60382 ribonucleotide reductase,large subunit
Additional Members : Average Identity to Core : 0
5_2_Tegument Protein
Core Members : Average percent Identity : 15.2115
Fake_#13 gi|m0x13 multi P
EHV1_#24 gi|330816 tegument protein
EHV2_#65 gi|695237 tegument protein
EHV4_#24 gi|2605967 24
HCMV_#62 gi|1780826 HCMVUL48
HSV1_#39 gi|59536|gnl|PID|e312351 very large tegument protein
HSV2_#39 gi|1869859|gnl|PID|e304179 very large tegument protein
VZV_#22 gi|60011 ORF22 (AA1-2763)
EBV_#20 gi|1334853 BPLF1 reading frame, 1 NXT/S, analogous to VZV RF22
HHV6_#41 gi|854010 U31, large tegument protein
HHV6_#95 gi|854064 U87
HHV7_#36 gi|1139633 large tegument protein
MHV68_#62 gi|2317959 tegument protein
HVS2_#65 gi|60385 ORF 64; EERF2; sim. to other HV
Additional Members : Average Identity to Core : 14.4160935672515
Fake_#12 gi|m0x12 multi N
Fake_#9 gi|m0x9 multi K
HCMV_#125 gi|1780889|gnl|PID|e27311 hypothetical protein
HCMV_#156 gi|1780922|gnl|PID|e298613 HCMVIRL8 = TRL8
HCMV_#160 gi|1780925|gnl|PID|e298615 HCMVIRL4 = TRL4
HCMV_#4 gi|59596|gnl|PID|e298601 ORF in major early transcript (2)
HCMV_#8 gi|59599|gnl|PID|e298603 HCMVTRL8 = IRL8
HSV1_#52 gi|59549|gnl|PID|e312364 tegument protein
HSV1_#75
HSV2_#1 gi|1869821|gnl|PID|e308397 RL1
HSV2_#62 gi|1869882|gnl|PID|e308426 RL1
EBV_#10 gi|1334843|gnl|PID|e25068 BWRF1 reading frame 8
EBV_#11 gi|1334844|gnl|PID|e25069 BWRF1 reading frame 9
EBV_#12 gi|1334845|gnl|PID|e25070 BWRF1 reading frame 10
EBV_#13 gi|1334846|gnl|PID|e25071 BWRF1 reading frame 11
EBV_#14 gi|1334847|gnl|PID|e25072 BWRF1 reading frame 12
EBV_#15 gi|1632787|gnl|PID|e25074 BYRF1, encodes EBNA-2
EBV_#3 gi|1334836|gnl|PID|e25077 BCRF2 3072 repeat, reading frame 1
EBV_#39 gi|1632792|gnl|PID|e276431 EBNA3B (EBNA4A) latent protein
EBV_#4 gi|1334837|gnl|PID|e25078 BWRF1 reading frame 2
EBV_#41 TRANSLATE of: v01555 check: 1039 from: 95725 to: 98244
EBV_#43 gi|1632793|gnl|PID|e276455 EBNA3C (EBNA 4B) latent protein
EBV_#44 TRANSLATE of: v01555 check: 1039 from: 98805 to: 101420
EBV_#46 gi|1632794|gnl|PID|e276432 BZLF1 reading frame,
EBV_#5 gi|1334838|gnl|PID|e25079 BWRF1 reading frame 3
EBV_#6 gi|1334839|gnl|PID|e25080 BWRF1 reading frame 4
EBV_#7 gi|1334840|gnl|PID|e25081 BWRF1 reading frame 5
EBV_#75 gi|1334904|gnl|PID|e25011 BTRF1 reading frame.
EBV_#8 gi|1334841|gnl|PID|e25066 BWRF1 reading frame 6
EBV_#9 gi|1334842|gnl|PID|e25067 BWRF1 reading frame 7
HHV6_#109 gi|853970 DR4
HHV6_#5 gi|853969 DR4
IHV_#28 gi|331238 ORF 28
IHV_#48 gi|331258 ORF 48
IHV_#67 gi|331276 ORF 66
MHV68_#73 gi|2317999 immediate-early protein
5_3_Capsid Protein?
Core Members : Average percent Identity : 18.440380952381
EHV2_#67 gi|695239 ORF 66
HCMV_#63 gi|1780827 HCMVUL49
EBV_#18 gi|1632788|gnl|PID|e25058 BFRF2 early gene, homolog to HFLF5 in CMV
HHV6_#43 gi|854012 U33
HHV7_#38 gi|1139635 capsid protein
MHV68_#64 gi|2317996 unknown
HVS2_#67 gi|60387 ORF 66; ECLF6; sim. to other HV
Additional Members : Average Identity to Core : 0
5_4_Helicase/Primase component
Core Members : Average percent Identity : 20.5429848484849
EHV1_#7 gi|330799 associated with a DNA helicase/primase complex;
EHV2_#57 gi|695229 DNA helicase-primase complex component
EHV4_#7 gi|2606017 7
HCMV_#84 gi|1780848|gnl|PID|e27270 Homology to HSV-1 prot. req. for DNA rep.
HSV1_#56 gi|59552|gnl|PID|e312368 UL52
HSV2_#56 gi|1869876|gnl|PID|e304282 UL52
VZV_#6 gi|59995 ORF6 (AA1-1083)
EBV_#29 gi|1334862 BSLF1 reading frame, homologous to RF 6 VZV
HHV6_#53 gi|854022 U43, helicase-primase complex
HHV7_#48 gi|1139645 primase
MHV68_#53 gi|2317955 DNA replication protein
HVS2_#57 gi|60376 ORF 56; EDRF4; sim. to other HV
Additional Members : Average Identity to Core : 0
5_5_dUTPase
Core Members : Average percent Identity : 19.7846222222222
EHV1_#9 gi|330801 dUTPase
EHV2_#55 gi|695227 ORF 54
EHV4_#9 gi|2606026 9
HSV1_#54 gi|59550|gnl|PID|e312366 deoxyuridine triphosphatase
HSV2_#54 gi|1869874|gnl|PID|e304281 deoxyuridine triphosphatase
VZV_#8 gi|59997 ORF8 (AA1-396)
EBV_#31 gi|1334864 BLLF3 early gene (BLLF2 in Baer et al, 1984).
IHV_#49 gi|331259 dUTPase
MHV68_#51 gi|2317954 dUTPase
HVS2_#55 gi|60375 dUTPase
Additional Members : Average Identity to Core : 0
5_6_Tegument Protein
Core Members : Average percent Identity : 27.9329756097561
EHV2_#68 gi|695240 tegument protein
HCMV_#64 gi|1780828 HCMVUL50
EBV_#17 gi|1334850 BFRF1 early gene 1 NXT/S, homologous to HFLF4 in CMV
HHV6_#44 gi|854013 U34
HHV7_#39 gi|1139636 putative virion protein
MHV68_#65 gi|2317997 tegument protein
HVS2_#68 gi|60388 ORF 67; ECLF5; sim. to other HV
Additional Members : Average Identity to Core : 0
5_7_Glycoprotein M
Core Members : Average percent Identity : 26.0679696969697
EHV1_#52 gi|330843 membrane protein
EHV2_#40 gi|695212 glycoprotein M
EHV4_#52 gi|2605998 52
HCMV_#115 gi|1780879 Multiple hydrophobic domains
HSV1_#12 gi|59510|gnl|PID|e312324 virion glycoprotein M
HSV2_#12 gi|1869832|gnl|PID|e304162 virion glycoprotein M
VZV_#49 gi|60040 ORF 50 (AA1-435)
EBV_#59 gi|1334889 BBRF3 late reading frame
HHV6_#82 gi|854051 U72, integral membrane protein, glycoprotein M, gM
HHV7_#76 gi|1139673 glycoprotein M
MHV68_#37 gi|2317979 glycoprotein M
HVS2_#40 gi|60360 integral membrane protein
Additional Members : Average Identity to Core : 2.006
Fake_#11 gi|m0x11 multi M
5_8_Virion Protein Kinase
Core Members : Average percent Identity : 17.2192846153846
EHV1_#49 gi|330840 virion protein kinase
EHV2_#37 gi|695209 virion protein kinase
EHV4_#49 gi|2605994 49
HCMV_#112 gi|1780876 Phosphotransferase? (13)
HSV1_#15 gi|59514|gnl|PID|e312327 protein kinase
HSV2_#15 gi|1869835|gnl|PID|e304164 protein kinase
VZV_#46 gi|60036 ORF 47 (AA1-510)
EBV_#62 gi|1334892|gnl|PID|e25030 BGLF4 early gene, homologous to RF 47 VZV
HHV6_#79 gi|854048 U69, ganciclovir kinase, phosphotransferase
HHV7_#73 gi|1139670 phosphotransferase
MHV68_#34 gi|2317947 kinase
HVS2_#37 gi|60357 tyrosine-specific protein kinase
Additional Members : Average Identity to Core : 0
5_9_DNA Packaging/ Terminase?
Core Members : Average percent Identity : 22.8097876712329
EHV1_#45 gi|330792 DNA packaging protein
EHV2_#29 gi|695201 ORF 29b; terminase?; ORF 29a and 29b likely spliced
EHV4_#45 gi|2605992 47/44
HCMV_#104 gi|1813970|gnl|PID|e298607 Conserved herpesvirus spliced gene
HSV1_#17 gi|59501|gnl|PID|e312331 UL15
HSV2_#17 gi|1869837|gnl|PID|e304165 UL15
VZV_#44 gi|60034 ORF45 (spliced to ORF42) (352 AA)
EBV_#65 gi|1632798|gnl|PID|e276433 probable DNA packaging protein
HHV6_#70 gi|854039 U60, late spliced gene(U60-66)
HHV7_#66 gi|1139663 late spliced gene
IHV_#62 gi|331210 terminase
MHV68_#26 gi|2317977 packaging protein
HVS2_#30 gi|60355 ORF 29; conserved spliced gene
Additional Members : Average Identity to Core : 19.4873255813954
EHV2_#34 gi|695206 ORF 29a; expression of ORF 29a and 29b likely spliced
EBV_#64 gi|1334893 BGRF1 reading frame, homologous to RF 45 VZV, spliced
EBV_#69 TRANSLATE of: v01555 check: 1039 from: 129188 to: 130348
HHV6_#76 gi|854045 U66, late spliced gene (U60- 66)
5_10_Glycoprotein H
Core Members : Average percent Identity : 18.8716608695652
EHV1_#40 gi|330832 membrane glycoprotein H
EHV2_#22 gi|695194 glycoprotein H
EHV4_#40 gi|2605984 39
HCMV_#89 gi|1780852 Glycoprotein H (10)
HSV1_#24 gi|59522|gnl|PID|e312336 virion glycoprotein H
HSV2_#24 gi|1869844|gnl|PID|e304270 virion glycoprotein H
VZV_#37 gi|60026 ORF37 (AA1-841)
EBV_#76 gi|1334905 BXLF2 late gene, encodes gp85; homologous to RF 37 VZV
HHV6_#58 gi|854027 U48, glycoprotein H, gH
HHV7_#53 gi|1139650 glycoprotein H
MHV68_#20 gi|2317937 glycoprotein H
HVS2_#23 gi|60343 glycoprotein H
Additional Members : Average Identity to Core : 0
5_11_Protease-Scaffold and assembly
Core Members : Average percent Identity : 23.9678409090909
EHV1_#36 gi|330827 protease
EHV2_#17 gi|695188 proteinase/capsid scaffold protein
EHV4_#36 gi|2605979 35
HCMV_#94 gi|1780857 HCMVUL80
HSV1_#28 gi|59526|gnl|PID|e312340 protease
HSV2_#28 gi|1869848|gnl|PID|e304172 protease
VZV_#33 gi|60022 ORF33 (AA1-605)
EBV_#80 gi|1334909 BVRF2 early gene, N-terminus homologous to RF 33 VZV
HHV6_#63 gi|854032 U53, protease-assembly protein
HHV7_#58 gi|1139655 protease
MHV68_#15 gi|2317972 capsid protein
HVS2_#18 gi|60339 ORF 17; similarity to other herpesviruses (HV)
Additional Members : Average Identity to Core : 13.5552222222222
EHV1_#35 gi|330828 capsid assembly protein
EHV4_#35 gi|2605980 35.5
HCMV_#95 gi|1780858 Assembly protein (24)
EBV_#81 gi|1334910 BdRF1 reading frame; this is the C terminus of BVRF2
5_12_Tegument Protein
Core Members : Average percent Identity : 24.0343787878788
EHV1_#37 gi|330829 virion protein
EHV2_#19 gi|695191 tegument protein
EHV4_#37 gi|2605981 36
HCMV_#91 gi|1780854 HCMVUL77
HSV1_#27 gi|59525|gnl|PID|e312339 capsid associated tegument protein
HSV2_#27 gi|1869847|gnl|PID|e304271 capsid associated tegument protein
VZV_#34 gi|60023 ORF34 (AA1-579)
EBV_#79 gi|1334908 BVRF1 early reading frame, homologous to RF 34 VZV
HHV6_#60 gi|854029 U50
HHV7_#55 gi|1139652 viron protein
MHV68_#17 gi|2317973 tegument protein
HVS2_#20 gi|60340 ORF 19; sim. to other HV
Additional Members : Average Identity to Core : 0
5_13_Unknown
Core Members : Average percent Identity : 28.6021732283465
EHV1_#38 gi|330830 ORF 37
EHV2_#20 gi|695192 ORF 20
EHV4_#38 gi|2605982 37
HCMV_#90 gi|1780853 HCMVUL76
HSV1_#26 gi|59523|gnl|PID|e312338 UL24
HSV2_#26 gi|1869846|gnl|PID|e304171 UL24
VZV_#35 gi|60024 ORF35 (AA1-258)
EBV_#78 gi|1334906 BXRF1 late gene, homolog to RF 35 VZV Basic (core?) prot
HHV6_#59 gi|854028 U49
HHV7_#54 gi|1139651 U49 gene product
MHV68_#18 gi|2317974 unknown
HVS2_#21 gi|60342 ORF 20; sim. to other HV
Additional Members : Average Identity to Core : 0
5_14_Major Capsid Protein
Core Members : Average percent Identity : 33.7684090909091
EHV1_#43 gi|330835 major capsid protein
EHV2_#25 gi|695197 capsid protein
EHV4_#43 gi|2605988 42
HCMV_#101 gi|1780864 Major capsid protein (12)
HSV1_#21 gi|59519|gnl|PID|e312333 major capsid protein
HSV2_#21 gi|1869841|gnl|PID|e304168 major capsid protein
VZV_#40 gi|60029 ORF40 (AA1-1396)
EBV_#73 gi|1334902 BcLF1 late gene, homolog to RF 40 VZV, major capsid
HHV6_#67 gi|854036 U57, major capsid protein
HHV7_#63 gi|1139660 major capsid protein
MHV68_#23 gi|2317938 major capsid protein
HVS2_#26 gi|60346 major capsid protein
Additional Members : Average Identity to Core : 15.2658666666667
HHV7_#106 gi|1139703 H3' gene product
HHV7_#7 gi|1139604 H3 gene product
MHV68_#52 gi|2317989 unknown
5_15_Unknown
Core Members : Average percent Identity : 29.9836
EHV2_#18 gi|695190 ORF 18
HCMV_#93 gi|1780856 HCMVUL79
HHV6_#62 gi|854031 U52
HHV7_#57 gi|1139654 U52 gene product
MHV68_#16 gi|2317935 unknown
HVS2_#19 gi|60338 ORF 18; similarity ((sim.) to other HV
Additional Members : Average Identity to Core : 0
5_16_Helicase/Primase component
Core Members : Average percent Identity : 26.7292380952381
EHV1_#57 gi|330848 associated with a DNA helicase/primase complex;
EHV2_#45 gi|695217 DNA helicase-primase complex component
EHV4_#57 gi|2606003 57
HCMV_#120 gi|1780883 Homology to helicases
HSV1_#7 gi|59507|gnl|PID|e312319 UL5
HSV2_#7 gi|1869827|gnl|PID|e304159 UL5
VZV_#54 gi|60044 ORF 55 (AA1-881)
EBV_#54 gi|1334885 BBLF4 early gene, very good homology to RF55 VZV
HHV6_#87 gi|854056 old name HDRF2; helicase in helicase-primase complex
HHV7_#81 gi|1139678 helicase
IHV_#25 gi|331235 SFI helicase
MHV68_#41 gi|2317951 helicase-primase
HVS2_#45 gi|60364 helicase
Additional Members : Average Identity to Core : 0
5_17_Thymidine Kinase
Core Members : Average percent Identity : 18.0870609756097
EHV1_#39 gi|330831 thymidine kinase
EHV2_#21 gi|695193 thymidine kinase
EHV4_#39 gi|2605983 38
HSV1_#25 gi|59524|gnl|PID|e312337 thymidine kinase
HSV2_#25 gi|1869845|gnl|PID|e304170 thymidine kinase
VZV_#36 gi|60025 ORF36 (AA1-341)
EBV_#77 gi|1334907 BXLF1 early reading frame, thymidine kinase
IHV_#5 gi|331215 thymidine kinase
MHV68_#19 gi|2317936 thymidine kinase
HVS2_#22 gi|60341 thymidine kinase
Additional Members : Average Identity to Core : 14.3448
IHV_#83 gi|331292 thymidine kinase
5_18_Uricil DNA Glycosylase
Core Members : Average percent Identity : 28.7044242424243
EHV1_#61 gi|330852 uracil-DNA glycosylase
EHV2_#47 gi|695219 uracil DNA glycosylase
EHV4_#61 gi|2606008 61
HCMV_#131 gi|1780896 Homology to uracil-DNA glycosylase
HSV1_#4 gi|59503|gnl|PID|e312316 uracil-DNA glycosylase
HSV2_#4 gi|1869824|gnl|PID|e304157 uracil-DNA glycosylase
VZV_#58 gi|60048 ORF 59 (AA1-305)
EBV_#52 gi|1632795|gnl|PID|e25020 BKRF3, homologous to RF 59 VZV
HHV6_#90 gi|854059 U81, uracil-DNA glycosylase
HHV7_#86 gi|1139683 uracil-DNA glycosylase
MHV68_#43 gi|2317983 uracil DNA glycosylase
HVS2_#47 gi|60367 uracil DNA glucosidase
Additional Members : Average Identity to Core : 0
5_19_Alkaline Exonuclease
Core Members : Average percent Identity : 18.363303030303
EHV1_#50 gi|330841 deoxyribonuclease
EHV2_#38 gi|695210 deoxyribonuclease
EHV4_#50 gi|2605996 50
HCMV_#113 gi|1780877 DNase homologue
HSV1_#14 gi|59513|gnl|PID|e312326 deoxyribonuclease
HSV2_#14 gi|1869834|gnl|PID|e304266 deoxyribonuclease
VZV_#47 gi|60037 ORF 48 (AA1-551)
EBV_#61 gi|1334891 BGLF5 early gene, homolog to RF 48 VZV
HHV6_#80 gi|854049 U70, alkaline exonuclease
HHV7_#74 gi|1139671 alkaline exonuclease
MHV68_#35 gi|2317948 alkaline exonuclease
HVS2_#38 gi|60358 alkaline exonuclease
Additional Members : Average Identity to Core : 0
5_20_Immediate Early Transcription regulator
Core Members : Average percent Identity : 19.7928666666667
EHV1_#64 gi|330855 transcriptional activator
EHV4_#64 gi|2606027 64
HCMV_#75 gi|1813968|gnl|PID|e27260 HCMVUL61
HSV1_#63 gi|59558|gnl|PID|e312312 RS1
HSV2_#63 gi|1869883|gnl|PID|e308427 RS1
VZV_#61 gi|60051 ORF 62 (AA1-1310)
Additional Members : Average Identity to Core : 19.9748727272727
EHV1_#80 gi|330871 transcriptional activator
EHV2_#15 gi|695187 ORF 13
EHV4_#79 gi|2606011 64
HSV1_#77 gi|59571|gnl|PID|e312313 RS1
HSV2_#77 gi|1869897|gnl|PID|e308428 RS1
VZV_#70 gi|60060 ORF 71 (AA1-1310)
MHV68_#14 gi|2317934 unknown
MHV68_#68 gi|2317962 unknown
MHV68_#69 gi|2317963 unknown
MHV68_#70 gi|2317964 unknown
MHV68_#79 gi|2317968 unknown
MHV68_#80 gi|2318003 unknown
5_21_Origin Binding Protein
Core Members : Average percent Identity : 27.5678095238095
EHV1_#53 gi|330844 origin-binding protein
EHV4_#53 gi|2605999 53
HSV1_#11 gi|59511|gnl|PID|e312323 UL9
HSV2_#11 gi|1869831|gnl|PID|e304265 UL9
VZV_#50 gi|60039 ORF 51 (AA1-835)
HHV6_#83 gi|854052 U73, origin binding protein
HHV7_#77 gi|1139674 replication origin binding protein (OBP)
Additional Members : Average Identity to Core : 0
5_22_Membrane protein
Core Members : Average percent Identity : 18.5596637931035
Fake_#17 gi|m0x17 multi T
EHV1_#71 gi|330862 membrane glycoprotein
EHV2_#77 gi|695249 ORF E9; serine/threonine rich, hydrophobic N- and C-term.
EHV4_#71 gi|2606019 71
HCMV_#133 gi|1780898|gnl|PID|e27320 HCMVUL116
HSV2_#67 gi|1869887|gnl|PID|e304286 virion glycoprotein G
EBV_#34 gi|1334869 BLLF1a, late gene, gp350 membrane antigen, 36 NXT /S
EBV_#70 gi|1334899 BDLF3 late reading frame 9xNXT/S
HHV6_#57 gi|854026 U47, glycoprotein
HHV7_#27 gi|1139624 U23 gene product
IHV_#50 gi|331260 ORF 50
MHV68_#48 gi|2317953 glycoprotein 150
HVS2_#52 gi|60372 glycoprotein
Additional Members : Average Identity to Core : 15.3078205128205
Fake_#16 gi|m0x16 multi S
EHV1_#16 gi|330808 membrane glycoprotein C
EHV1_#60 gi|330851 ORF 60
EHV1_#73 gi|330864 membrane glycoprotein I
EHV2_#1 gi|695173 G protein-coupled receptor
EHV2_#28 gi|695200 ORF 28
EHV2_#3 gi|695175 ORF E3; N- and C- hydrophobic domains
EHV2_#52 gi|695224 ORF 51; ser/thr rich, hydrophobic N- and C-term
EHV2_#79 gi|695251 G protein-coupled receptor
EHV4_#16 gi|2605958 16
EHV4_#73 gi|2606021 73
HCMV_#12 gi|59603|gnl|PID|e298604 RL11 FAMILY
HCMV_#13 gi|59604|gnl|PID|e298605 HCMVTRL13 = IRL13
HCMV_#136 gi|1780901 HCMVUL119
HCMV_#141 gi|1780907 HCMVUL124
HCMV_#149 gi|1780915 HCMVUL132
HCMV_#151 gi|1780917|gnl|PID|e298610 HCMVIRL13 = TRL13
HCMV_#152 gi|1780918|gnl|PID|e298631 RL11 FAMILY
HCMV_#194 gi|1780960 HCMVUS29
HCMV_#20 gi|59611 RL11 FAMILY
HCMV_#21 gi|59612 RL11 FAMILY
HCMV_#22 gi|59613 RL11 FAMILY
HCMV_#23 gi|59614 RL11 FAMILY
HCMV_#25 gi|59616 RL11 FAMILY
HCMV_#46 gi|59637 pp150 (4)
HCMV_#49 gi|59640 UL25 FAMILY
HCMV_#87 gi|1780850 HCMVUL73
HCMV_#88 gi|1780851 HCMVUL74
HSV1_#47 gi|59544|gnl|PID|e312359 virion glycoprotein C
HSV1_#67 gi|59562|gnl|PID|e312376 virion glycoprotein G
HSV1_#70 gi|59565|gnl|PID|e312379 Virion glycoprotein I
VZV_#14 gi|60003 ORF14 (AA1-560)
VZV_#2 gi|59991 ORF2 (AA1-238)
EBV_#19 gi|1632789|gnl|PID|e25059 BFRF3 early reading frame
EBV_#35 gi|1334868 BLLF1b, late gene gp220 membrane antigen, spliced
HHV6_#33 gi|854002 U23, glycoprotein
HHV6_#64 gi|854033 U54
HHV7_#52 gi|1139649 U47 gene product
IHV_#7 gi|331217 membrane protein
IHV_#85 gi|331294 membrane protein
HVS2_#15 gi|60335 ORF 14
5_23_DNA Polymerase
Core Members : Average percent Identity : 26.2881805555555
EHV1_#30 gi|330822 DNA polymerase
EHV2_#9 gi|695181 DNA polymerase replicative subunit
EHV4_#30 gi|2605974 30
HCMV_#68 gi|1780832 DNA polymerase (8)
HSV1_#33 gi|59530|gnl|PID|e312345 DNA polymerase
HSV2_#33 gi|1869853|gnl|PID|e304175 DNA polymerase
VZV_#28 gi|60017 ORF28 (AA1-1194)
EBV_#84 gi|1334913 BALF5 DNA polymerase
HHV6_#48 gi|854017 U38, DNA polymerase
HHV7_#43 gi|1139640 DNA polymerase
IHV_#57 gi|331267 DNA polymerase
MHV68_#9 gi|2317930 DNA polymerase
HVS2_#10 gi|60330 DNA polymerase
Additional Members : Average Identity to Core : 12.6004
HHV7_#20 gi|1139617 HCMV US22 gene family; U16-U17 spliced exon
5_24_Unknown
Core Members : Average percent Identity : 23.6859834710744
EHV1_#47 gi|330838 ORF 46
EHV2_#33 gi|695205 ORF 33
EHV4_#47 gi|2605991 46
HCMV_#109 gi|1780872 HCMVUL94
HSV1_#18 gi|59516|gnl|PID|e312329 UL16
HSV2_#18 gi|1869838|gnl|PID|e1192267 proposed start codon is CTG
VZV_#43 gi|60033 ORF44 (AA1-363)
EBV_#66 gi|1334895 BGLF2 late reading frame, poor homology to RF 44 VZV
HHV6_#75 gi|854044 U65
HHV7_#70 gi|1139667 U65 gene product
MHV68_#30 gi|2317944 unknown
HVS2_#34 gi|60353 ORF 33; sim. to other HV
Additional Members : Average Identity to Core : 13.862
HHV6_#104 gi|854073 U100, glycoprotein gp82/105
5_25_Unknown
Core Members : Average percent Identity : 20.7121550387597
EHV1_#55 gi|330846 ORF 55
EHV2_#43 gi|695215 ORF 42
EHV4_#55 gi|2606001 55
HCMV_#118 gi|1780882 HCMVUL103
HSV1_#9 gi|59508|gnl|PID|e312321 UL7
HSV2_#9 gi|1869829|gnl|PID|e304160 UL7
VZV_#52 gi|60042 ORF 53 (AA1-331)
EBV_#56 gi|1632797|gnl|PID|e25024 BBRF2 late gene, homologous to RF 53 VZV
HHV6_#85 gi|854054 U75
HHV7_#79 gi|1139676 U75 gene product
MHV68_#39 gi|2317980 unknown
HVS2_#43 gi|60363 ORF 42; sim. to other HV
Additional Members : Average Identity to Core : 0
5_26_Post Translational Regulator...or... transcription activator
Core Members : Average percent Identity : 17.3338115942029
EHV1_#5 gi|330797 transcriptional activator
EHV2_#58 gi|695230 ORF 57
EHV4_#5 gi|2605995 5
HSV1_#58 gi|59554|gnl|PID|e312370 UL54
HSV2_#58 gi|1869878|gnl|PID|e304191 UL54
VZV_#4 gi|59993 ORF4 (AA1-452)
EBV_#27 gi|1632790|gnl|PID|e25042 BMLF1 early gene. Diffuse early antigen
MHV68_#55 gi|2317957 immediate-early protein
HVS2_#58 gi|60378 ORF 57; EJRF1
Additional Members : Average Identity to Core : 0
5_27_Small subunit of Ribonucleotide Reductase
Core Members : Average percent Identity : 41.78275
EHV1_#20 gi|330812 ribonucleotide reductase RR2
EHV2_#61 gi|695233 ribonucleotide reductase, small subunit
EHV4_#20 gi|2605963 20
HSV1_#43 gi|59540|gnl|PID|e312355 ribonucleotide reductase small subunit
HSV2_#43 gi|1869863|gnl|PID|e304277 ribonucleotide reductase small subunit
VZV_#18 gi|60007 ORF18 (AA1-306)
EBV_#24 gi|1334857 BaRF1 early gene, homologous to HSV 38K ribonuc. reduc.
MHV68_#58 gi|2317992 ribonucleotide reductase small
HVS2_#61 gi|60381 ribonucleotide reductase,small subunit
Additional Members : Average Identity to Core : 14.03225
HCMV_#40 gi|59631 HCMVUL26
MHV68_#45 gi|2317985 unknown
5_28. Minor Capsid Protein
Core Members : Average percent Identity : 21.4712954545455
EHV1_#56 gi|330847 virion protein
EHV2_#44 gi|695216 minor capsid protein
EHV4_#56 gi|2606002 56
HCMV_#119 gi|1780884 HCMVUL104
HSV1_#8 gi|59506|gnl|PID|e312320 minor capsid protein
HSV2_#8 gi|1869828|gnl|PID|e304264 minor capsid protein
VZV_#53 gi|60043 ORF 54 (AA1-769)
EBV_#55 gi|1334884 BBRF1 late reading frame, homologous to RF 54 VZV
HHV6_#86 gi|854055 U76
HHV7_#80 gi|1139677 putative viron protein
MHV68_#40 gi|2317981 capsid protein
HVS2_#44 gi|60365 ORF 43; sim. to other HV
Additional Members : Average Identity to Core : 0
5_29_Unknown
Core Members : Average percent Identity : 24.2803333333333
EHV2_#54 gi|695226 ORF 53
HCMV_#87 gi|1780850 HCMVUL73
EBV_#32 gi|1334865 BLRF1 late reading frame
HHV6_#56 gi|854025 U46, membrane-secreted protein
HHV7_#51 gi|1139648 U46 gene product
MHV68_#50 gi|2317988 unknown
HVS2_#54 gi|60374 ORF 53; EDLF2; sim. to other HV
Additional Members : Average Identity to Core : 0
5_30_Unknown
Core Members : Average percent Identity : 18.0368095238095
EHV2_#24 gi|695196 ORF 24
HCMV_#102 gi|1780865 HCMVUL87
EBV_#74 gi|1632799|gnl|PID|e25010 BcRF1 reading frame
HHV6_#68 gi|854037 U58
HHV7_#64 gi|1139661 U58 gene product
MHV68_#22 gi|2317976 unknown
HVS2_#25 gi|60345 ORF 24; sim. to other HV
Additional Members : Average Identity to Core : 0
5_31_ssDNA binding Protein
Core Members : Average percent Identity : 27.1420909090909
EHV1_#31 gi|330823 single stranded DNA binding protein
EHV2_#6 gi|695178 single-stranded DNA binding protein
EHV4_#31 gi|2605975 31
HCMV_#71 gi|1780835 Major DNA binding protein
HSV1_#32 gi|59529|gnl|PID|e312344 UL29
HSV2_#32 gi|1869852|gnl|PID|e304273 UL29
VZV_#29 gi|60018 ORF29 (AA1-1204)
EBV_#87 gi|1334916 BALF2 early gene, homolog to RF 29 VZV & major DNA bind
HHV6_#51 gi|854020 U41, major DNA binding protein
HHV7_#46 gi|1139643 major DNA binding protein
MHV68_#6 gi|2317927 ssDNA binding protein
HVS2_#7 gi|60327 major ssDNA-binding protein
Additional Members : Average Identity to Core : 13.123
IHV_#75 gi|331284 ORF 76; related sequence to ORF 77
5_32_DNA cleavage...or...transport?
Core Members : Average percent Identity : 24.3074545454545
EHV1_#32 gi|330824 virion protein
EHV2_#7 gi|695179 ORF 07
EHV4_#32 gi|2605976 32
HCMV_#70 gi|1780834 HCMVUL56
HSV1_#31 gi|59528|gnl|PID|e312343 UL28
HSV2_#31 gi|1869851|gnl|PID|e304174 UL28
VZV_#30 gi|60019 ORF30 (AA1-770)
EBV_#86 gi|1334915|gnl|PID|e24996 BALF3 reading frame
HHV6_#50 gi|854019 U40
HHV7_#45 gi|1139642 U40 gene product
MHV68_#7 gi|2317928 transport protein
HVS2_#8 gi|60328 transport protein
Additional Members : Average Identity to Core : 0
5_33_Unknown
Core Members : Average percent Identity : 23.023380952381
EHV2_#31 gi|695203 ORF 31
HCMV_#107 gi|1780870 HCMVUL92
EBV_#68 gi|1334897 BDLF4 early reading frame
HHV6_#73 gi|854042 U63
HHV7_#68 gi|1139665 U63 gene product
MHV68_#28 gi|2317942 unknown
HVS2_#32 gi|60351 ORF 31; sim. to other HV
Additional Members : Average Identity to Core : 0
5_34_Glycoprotein B, role in cell entry
Core Members : Average percent Identity : 19.3601818181818
EHV1_#33 gi|330825 membrane glycoprotein B
EHV2_#8 gi|695180 glycoprotein B
EHV4_#33 gi|2605977 33
HCMV_#69 gi|1780833 Glycoprotein B (9)
HSV1_#30 gi|59527|gnl|PID|e312342 virion glycoprotein B
HSV2_#30 gi|1869850|gnl|PID|e304272 glycoprotein B
VZV_#31 gi|60020 ORF31 (AA1-868)
EBV_#85 gi|1334914 BALF4 late gene 9xNXT/S homologous to HSV1 glycoprot. B
HHV6_#49 gi|854018 U39, glycoprotein B
HHV7_#44 gi|1139641 glycoprotein B
MHV68_#8 gi|2317929 glycoprotein B
HVS2_#9 gi|60329 glycoprotein B
Additional Members : Average Identity to Core : 9.87207692307692
Fake_#20 gi|m0x20 multi Y
HHV6_#71 gi|854040 U61
HHV7_#97 gi|1139693 spliced glycoprotein
5_35_Capsid Protein
Core Members : Average percent Identity : 28.2419236641221
EHV1_#44 gi|330836 capsid protein
EHV2_#26 gi|695198 capsid protein
EHV4_#44 gi|2605989 43
HCMV_#100 gi|1780863 HCMVUL85
HSV1_#20 gi|59518|gnl|PID|e312332 capsid protein
HSV2_#20 gi|1869840|gnl|PID|e304167 capsid protein
VZV_#41 gi|60030 ORF41 (AA1-316)
EBV_#72 gi|1334901 BDLF1 late reading frame, poor homology to RF 41 VZV
HHV6_#66 gi|854035 U56
HHV7_#62 gi|1139659 putative capsid protein
MHV68_#24 gi|2317939 capsid protein
HVS2_#27 gi|60347 ORF 26; sim. to other HV
Additional Members : Average Identity to Core : 0
5_36_Capsid Maturation/DNA packaging
Core Members : Average percent Identity : 21.5293611111111
EHV1_#27 gi|330819 ORF 27
EHV2_#69 gi|695241 ORF 67A
EHV4_#27 gi|2605970 27
HCMV_#65 gi|1780829 HCMVUL51
HSV1_#36 gi|59532|gnl|PID|e312348 UL33
HSV2_#36 gi|1869856|gnl|PID|e304177 UL33
VZV_#25 gi|60015 ORF25 (AA1-156)
HHV6_#45 gi|854014 U35
HHV7_#40 gi|1139637 U35 gene product
Additional Members : Average Identity to Core : 0
5_37_Unknown
Core Members : Average percent Identity : 22.6166190476191
EHV2_#35 gi|695207 ORF 34
HCMV_#110 gi|1780873 HCMVUL95
EBV_#63 gi|1334894 BGLF3 reading frame
HHV6_#77 gi|854046 U67
HHV7_#71 gi|1139668 U67 gene product
MHV68_#32 gi|2317945 unknown
HVS2_#35 gi|60354 ORF 34; sim. to other HV
Additional Members : Average Identity to Core : 0
5_38_Virion Protein
Core Members : Average percent Identity : 19.3789545454546
EHV1_#28 gi|330820 virion protein
EHV2_#71 gi|695243 ORF 68
EHV4_#28 gi|2605971 28
HCMV_#66 gi|1780830 HCMVUL52
HSV1_#35 gi|59533|gnl|PID|e312347 UL32
HSV2_#35 gi|1869855|gnl|PID|e304274 UL32
VZV_#26 gi|60014 ORF26 (AA1-585)
EBV_#16 gi|1334849 BFLF1, 2 NXT/S homologous to RF 26 in VZV and HFRF1 in
HHV6_#46 gi|854015 U36
HHV7_#41 gi|1139638 putative virion protein
MHV68_#66 gi|2317960 glycoprotein
HVS2_#69 gi|60389 ORF 68; ECRF1; sim. to other HV
Additional Members : Average Identity to Core : 14.25125
HHV6_#84 gi|854053 U74, helicase /primase complex
HVS2_#13 gi|60333 ORF 12; KCLF1
HVS2_#42 gi|60362 ORF 41
5_39_Unknown
Core Members : Average percent Identity : 34.4967
EHV1_#4 gi|330796 ORF 4
EHV4_#4 gi|2605985 4
HSV1_#59 gi|59555|gnl|PID|e312371 UL55
HSV2_#59 gi|1869879|gnl|PID|e304283 UL55
VZV_#3 gi|59992 ORF3 (AA1-179)
Additional Members : Average Identity to Core : 0
5_40_Unknown
Core Members : Average percent Identity : 33.4286
EHV1_#60 gi|330851 ORF 60
EHV4_#60 gi|2606007 60
HSV1_#5 gi|59504|gnl|PID|e312317 UL3
HSV2_#5 gi|1869825|gnl|PID|e304158 UL3
VZV_#57 gi|60047 ORF 58 (AA1-221)
Additional Members : Average Identity to Core : 0
5_41_Glycoprotein L
Core Members : Average percent Identity : 25.6613
EHV1_#62 gi|330853 membrane glycoprotein L
EHV4_#62 gi|2606009 62
HSV1_#3 gi|59502|gnl|PID|e312315 virion glycoprotein L
HSV2_#3 gi|1869823|gnl|PID|e304262 virion glycoprotein L
VZV_#59 gi|60049 ORF 60 (AA1-159)
Additional Members : Average Identity to Core : 15.74575
IHV_#20 gi|331230 ORF 20
5_42_Protein Kinase
Core Members : Average percent Identity : 31.0548
EHV1_#69 gi|330860 protein kinase
EHV4_#69 gi|2606016 69
HSV1_#66 gi|59561|gnl|PID|e312375 protein kinase; phosphorylates UL34
HSV2_#66 gi|1869886|gnl|PID|e304196 protein kinase; phosphorylates UL34
VZV_#65 gi|60055 ORF 66 (AA1-393)
Additional Members : Average Identity to Core : 13.7481111111111
IHV_#14 gi|331224 protein kinase
IHV_#72 gi|331281 protein kinase
IHV_#73 gi|331282 protein kinase
IHV_#92 gi|331301 protein kinase
5_43_Glycoprotein I
Core Members : Average percent Identity : 31.659
EHV1_#73 gi|330864 membrane glycoprotein I
EHV4_#73 gi|2606021 73
HSV1_#70 gi|59565|gnl|PID|e312379 Virion glycoprotein I
HSV2_#70 gi|1869890|gnl|PID|e304198 virion glycoprotein I
VZV_#66 gi|60056 ORF 67 (AA1-354)
Additional Members : Average Identity to Core : 0
5_44_Glycoprotein E
Core Members : Average percent Identity : 27.9349
EHV1_#74 gi|330865 membrane glycoprotein E
EHV4_#74 gi|2606022 74
HSV1_#71 gi|59566|gnl|PID|e312380 virion glycoprotein E
HSV2_#71 gi|1869891|gnl|PID|e304199 virion glycoprotein E
VZV_#67 gi|60057 ORF 68 (AA1-623)
Additional Members : Average Identity to Core : 0
5_45_Unknown
Core Members : Average percent Identity : 41.0855
EHV1_#48 gi|330839 ORF 48
EHV4_#48 gi|2605993 48
HSV1_#16 gi|1944538|gnl|PID|e312328 UL14
HSV2_#16 gi|1869836|gnl|PID|e304267 UL14
VZV_#45 gi|60035 ORF 46 (AA1-199)
Additional Members : Average Identity to Core : 0
5_46_Glycoprotein K
Core Members : Average percent Identity : 42.6548
EHV1_#6 gi|330798 membrane protein
EHV4_#6 gi|2606006 6
HSV1_#57 gi|59553|gnl|PID|e312369 virion glycoprotein K
HSV2_#57 gi|1869877|gnl|PID|e304190 virion glycoprotein K
VZV_#5 gi|59994 ORF5 (AA1-340)
Additional Members : Average Identity to Core : 0
5_47_late, spliced, packaging protein?
Core Members : Average percent Identity : 25.0007
EHV2_#34 gi|695206 ORF 29a; ORF 29a and 29b are likely spliced mRNA
VZV_#44 gi|60034 ORF45 (spliced to ORF42) (352 AA)
EBV_#64 gi|1334893 BGRF1, homologous to RF 45 VZV and spliced HSV gene (Co
HHV6_#76 gi|854045 U66, late spliced gene (U60- 66)
MHV68_#31 gi|2317978 packaging protein
Additional Members : Average Identity to Core : 0
5_48_Virion Protein
Core Members : Average percent Identity : 31.4113
EHV1_#66 gi|330857 virion protein
EHV4_#66 gi|2606013 66
HSV1_#74 gi|59568|gnl|PID|e312383 virion protein
HSV2_#74 gi|1869894|gnl|PID|e304201 virion protein
VZV_#63 gi|60053 ORF 64 (AA1-180)
Additional Members : Average Identity to Core : 33.32525
EHV1_#78 gi|330869 virion protein
EHV4_#77 gi|2606029 66
VZV_#68 gi|60058 ORF 69 (AA1-180)
5_49_Tegument? regulation?
Core Members : Average percent Identity : 23.275
Fake_#4 gi|m0x4 multi E
EHV1_#13 gi|330805 tegument protein
EHV4_#13 gi|2605955 13
VZV_#11 gi|60000 ORF11 (AA1-819)
HVS2_#74 gi|60394 ORF 73; ECLF1
Additional Members : Average Identity to Core : 14.592375
HCMV_#51 gi|1813966|gnl|PID|e298628 IE glycoprotein (7)
HSV1_#50 gi|59547|gnl|PID|e312362 tegument, transactivates immediate early
5_50_Unknown
Core Members : Average percent Identity : 32.7556
EHV1_#58 gi|330849 ORF 58
EHV4_#58 gi|2606004 58
HSV1_#6 gi|59505|gnl|PID|e312318 UL4
HSV2_#6 gi|1869826|gnl|PID|e304263 UL4
VZV_#55 gi|60045 ORF 56 (AA1-244)
Additional Members : Average Identity to Core : 0
5_51_Integral Membrane Protein
Core Members : Average percent Identity : 38.322
EHV1_#42 gi|330834 membrane protein
EHV4_#42 gi|2605987 41
HSV1_#22 gi|59520|gnl|PID|e312334 integral membrane protein
HSV2_#22 gi|1869842|gnl|PID|e304269 integral membrane protein
VZV_#39 gi|60028 ORF39 (AA1-240)
Additional Members : Average Identity to Core : 0
5_52_Tegument
Core Members : Average percent Identity : 34.3652
EHV1_#14 gi|330806 ORF 14
EHV4_#14 gi|2605956 14
HSV1_#49 gi|1944540|gnl|PID|e312361 tegument protein
HSV2_#49 gi|1869869|gnl|PID|e304185 tegument protein
VZV_#12 gi|60001 ORF12 (AA1-661)
Additional Members : Average Identity to Core : 0
5_53_Glycoprotein C
Core Members : Average percent Identity : 24.1583
EHV1_#16 gi|330808 membrane glycoprotein C
EHV4_#16 gi|2605958 16
HSV1_#47 gi|59544|gnl|PID|e312359 virion glycoprotein C
HSV2_#47 gi|1869867|gnl|PID|e304184 virion glycoprotein C
VZV_#14 gi|60003 ORF14 (AA1-560)
Additional Members : Average Identity to Core : 0
5_54_DNA polymerase Processivity factor
Core Members : Average percent Identity : 34.6655
EHV1_#18 gi|330810 DNA polymerase processivity factor
EHV4_#18 gi|2605960 18
HSV1_#45 gi|59542|gnl|PID|e312357 subunit of replicative DNA polymerase
HSV2_#45 gi|1869865|gnl|PID|e304183 subunit of replicative DNA polymerase
VZV_#16 gi|60005 ORF16 (AA1-408)
Additional Members : Average Identity to Core : 0
5_55_Tegument, host shot-off factor
Core Members : Average percent Identity : 41.3175
EHV1_#19 gi|330811 host shutoff virion protein
EHV4_#19 gi|2605961 19
HSV1_#44 gi|59541|gnl|PID|e312356 tegument protein; host shut-off factor
HSV2_#44 gi|1869864|gnl|PID|e304182 tegument protein; host shut-off factor
VZV_#17 gi|60006 ORF17 (AA1-455)
Additional Members : Average Identity to Core : 0
5_56_Membrane associated phosphoprotein
Core Members : Average percent Identity : 51.0259
EHV1_#26 gi|330818 virion protein
EHV4_#26 gi|2605969 26
HSV1_#37 gi|59534|gnl|PID|e312349 membrane associated phosphoprotein
HSV2_#37 gi|1869857|gnl|PID|e304178 membrane associated phosphoprotein
VZV_#24 gi|60013 ORF24 (AA1-269)
Additional Members : Average Identity to Core : 0
5_57_Unknown
Core Members : Average percent Identity : 47.5335
EHV1_#8 gi|330800 ORF 8
EHV4_#8 gi|2606025 8
HSV1_#55 gi|59551|gnl|PID|e312367 UL51
HSV2_#55 gi|1869875|gnl|PID|e304189 UL51
VZV_#7 gi|59996 ORF7 (AA1-259)
Additional Members : Average Identity to Core : 0
5_58_Myristilated Tegument Protein
Core Members : Average percent Identity : 39.2823
EHV1_#51 gi|330842 myristylated virion protein
EHV4_#51 gi|2605997 51
HSV1_#13 gi|59512|gnl|PID|e312325 myristilated tegument protein
HSV2_#13 gi|1869833|gnl|PID|e304163 myristylated tegument protein
VZV_#48 gi|60038 ORF 49 (AA1-81)
Additional Members : Average Identity to Core : 0
5_59_Unknown
Core Members : Average percent Identity : 33.2435172413793
EHV1_#46 gi|330837 ORF 45
EHV4_#46 gi|2605990 45
HSV1_#19 gi|59517|gnl|PID|e312330 UL17
HSV2_#19 gi|1869839|gnl|PID|e304268 UL17
VZV_#42 gi|60032 ORF43 (AA1-676)
EBV_#67 gi|1334896 BGLF1 late reading frame
Additional Members : Average Identity to Core : 0
5_60_Capsid Protein
Core Members : Average percent Identity : 47.7478
EHV1_#22 gi|330814 capsid protein
EHV4_#22 gi|2605965 22
HSV1_#41 gi|59538|gnl|PID|e312353 capsid protein
HSV2_#41 gi|1869861|gnl|PID|e304180 capsid protein
VZV_#20 gi|60009 ORF20 (AA1-483)
Additional Members : Average Identity to Core : 0
5_61_Tegument Protein
Core Members : Average percent Identity : 25.4966
EHV1_#76 gi|330867 tegument protein
EHV4_#76 gi|2606024 76
HSV1_#73 gi|59567|gnl|PID|e312382 tegument protein
HSV2_#73 gi|1869893|gnl|PID|e304200 tegument protein
VZV_#64 gi|60054 ORF 65 (AA1-102)
Additional Members : Average Identity to Core : 0
5_62_Unknown
Core Members : Average percent Identity : 44.6295
EHV1_#41 gi|330833 ORF 40
EHV4_#41 gi|2605986 40
HSV1_#23 gi|59521|gnl|PID|e312335 UL21
HSV2_#23 gi|1869843|gnl|PID|e304169 UL21
VZV_#38 gi|60027 ORF38 (AA1-541)
Additional Members : Average Identity to Core : 0
5_63_Tegument Protein?
C
ore Members : Average percent Identity : 33.5436EHV1_#23 gi|330815 ORF 23
EHV4_#23 gi|2605966 23
HSV1_#40 gi|59537|gnl|PID|e312352 tegument protein
HSV2_#40 gi|1869860|gnl|PID|e304276 tegument protein
VZV_#21 gi|60010 ORF21 (AA1-1038)
Additional Members : Average Identity to Core : 0
5_64_Capsid Protein
Core Members : Average percent Identity : 37.059
EHV1_#25 gi|330817 capsid protein
EHV4_#25 gi|2605968 25
HSV1_#38 gi|59535|gnl|PID|e312350 capsid protein
HSV2_#38 gi|1869858|gnl|PID|e304275 capsid protein
VZV_#23 gi|60012 ORF23 (AA1-235)
Additional Members : Average Identity to Core : 0
5_65_Unknown
Core Members : Average percent Identity : 23.1423636363636
EHV1_#29 gi|330821 ORF 29
EHV2_#72 gi|695244 ORF 69
EHV4_#29 gi|2605972 29
HCMV_#67 gi|1780831 HCMVUL53
HSV1_#34 gi|59531|gnl|PID|e312346 UL31
HSV2_#34 gi|1869854|gnl|PID|e304176 UL31
VZV_#27 gi|60016 ORF27 (AA1-333)
HHV6_#47 gi|854016 U37
HHV7_#42 gi|1139639 U37 gene product
MHV68_#67 gi|2317961 unknown
HVS2_#70 gi|60390 ORF 69; ECRF2; sim. to other HV
Additional Members : Average Identity to Core : 12.073
HHV7_#49 gi|1139646 U44 gene product
5_66_Tegument Protein
Core Members : Average percent Identity : 33.2164
EHV1_#11 gi|330803 tegument protein
EHV4_#11 gi|2605953 11
HSV1_#52 gi|59549|gnl|PID|e312364 tegument protein
HSV2_#52 gi|1869872|gnl|PID|e304187 tegument protein
VZV_#9 gi|59998 ORF9 (AA1-302)
Additional Members : Average Identity to Core : 0
5_67_Tegument Protein
Core Members : Average percent Identity : 32.4745
EHV1_#12 gi|330804 tegument protein
EHV4_#12 gi|2605954 12
HSV1_#51 gi|59548|gnl|PID|e312363 tegument protein
HSV2_#51 gi|1869871|gnl|PID|e304280 tegument protein
VZV_#10 gi|59999 ORF10 (AA1-410)
Additional Members : Average Identity to Core : 0
5_68_Associated with the Helicase/Primase complex?
Core Members : Average percent Identity : 28.73
EHV1_#54 gi|330845 associated with a DNA helicase/primase complex;
EHV4_#54 gi|2606000 54
HSV1_#10 gi|59509|gnl|PID|e312322 UL8
HSV2_#10 gi|1869830|gnl|PID|e304161 UL8
VZV_#51 gi|60041 ORF 52 (AA1-771)
Additional Members : Average Identity to Core : 0
5_69_Unknown
Core Members : Average percent Identity : 31.514
EHV2_#56 gi|695228 ORF 55
EBV_#30 gi|1334863 BSRF1 reading frame
HHV6_#54 gi|854023 U44
HHV7_#49 gi|1139646 U44 gene product
MHV68_#52 gi|2317989 unknown
HVS2_#56 gi|60377 ORF 55; EDLF1; sim. to EBV BSRF1
Additional Members : Average Identity to Core : 11.67425
HCMV_#85 gi|1780847|gnl|PID|e27269 HCMVUL71
MHV68_#31 gi|2317978 packaging protein
5_70_Unknown
Core Members : Average percent Identity : 16.0176428571429
EHV2_#32 gi|695204 ORF 32
EBV_#67 gi|1334896 BGLF1 late reading frame
HHV6_#74 gi|854043 U64
HHV7_#69 gi|1139666 U64 gene product
MHV68_#29 gi|2317943 unknown
HVS2_#33 gi|60352 ORF 32; sim. to other HV
Additional Members : Average Identity to Core : 11.668
HCMV_#108 gi|1780871 HCMVUL93
5_71_Tegument Protein, Transcription Transactivator
Core Members : Average percent Identity : 29.6697
EHV1_#13 gi|330805 tegument protein
EHV4_#13 gi|2605955 13
HSV1_#50 gi|59547|gnl|PID|e312362 tegument transactivator of immediate early
HSV2_#50 gi|1869870|gnl|PID|e304186 tegument transactivates immediate early
VZV_#11 gi|60000 ORF11 (AA1-819)
Additional Members : Average Identity to Core : 0