>MER11A_ERV2_Homo sapiens tgttgcgggaagtcagggaccccgaatggagggaccggctggagccryggcagaggaaca taaattgtgaagatttcattttaatatggacatttatcagttcccaattaatacttttat aatttcttatgcctgtctttactgcaatctctgaacataaattgtgaagatttcatttta atatggacatttatcagttcccaaataatacttttataatttcttatgcctgtctttact ttaatctcttaatcctgttatcttcgtaagctgaggatgtacgtcacctcaggaccactg tgataattgtgttaactgtacaaattgattgtaaaacatgtgtgtttgaacaatatgaaa tcagtgcaccttgaaaaagaacagaataacagcgattttagggaacaagggaagacaacc ataaggtctgactgcctgcagggtcgggcaaaatagagccatatttttcttcttgcagag agcctataaatggacgtgcaagtaggraagatatcgctaaattcttttcctagcaaggaa tattaataattaataccctgggaaaggaatgcattcctggggggaggtctataaacggcc gctctgggaatgtctgtcttatgcagttgagataaggactgaaatacgccctggtctcct gcagtaccctcaggcttactagggtggggaaaaaaccccgccctggtaaatttgtggtca gactggttctctgctctcgaaccctgttttctgttgtttaagatgtttatcaagacaata ygtgcaccgctgaacatagacccttatcagtagttctgattttgcccttgtcctgtttcc tcagaagcatgtgatctttgttctcctttttgccctttgaagcatgtgatcttgtgacct actccctgttcttacaccccctccccttttgaaatccttaataaaaacttgctggttttg aggctcaggtgggcatcacggtcctaccgatatgtgatgtcaccccyggaggcccagctg taaaattcctctctttgtactctttctctttatttctcagccrgccgacacttatggaaa atagaaagaacctacgttgaaatattgggggcaggttcccccgata >LTR13_ERV2_Homo sapiens tgtgggcggcaagccacccaggtgccgaggcaagagaccgagggcacgagctgttccagt ataataaaatatataaaataagaatagttatactagatatagatcttagatatgattata tatgaatatcattaatcattagtttgtagcaattactctttattccaatattataataat cctcgctctacaatcataacctaggaaaaaccaggccatacagagataggagctgagggg acatagtgagaagtgaccagaagacaagagtgcgagccttctgttatgcccggacagggc caccagagggctccttggtctagcggtaacgccagcgtctgggaagacgcccgttgccaa gcggaccgtggtctagcggtagcgtcagtgtcaaggaaaaacacccgctacttagcagac cgggaaagggagtctccctttccccgggggagtttagagaagactctactcctccacctc ttgtggagggcctgacatcagtcaggcccgcccgcagttatccggaggcctaaccgtctc cctgtgatgctgtgcttcagtggtcacgctcctagtccgccttcatgttccatcctgtac acctggctctgccttttagatagcagtagcaaattagtgaaagtactaaaagtctctgat aagcagaaataatggcgtaagctgtctctctctctctcctctctctctctgcctcggctg ccaggcagggaagggccccctgtccagtggacacgtgacccacgtgaccttacctatcat tggagatggctcacactccttaccctgcccctttgtcttgtatccaataaatatcagcgc agcctggcattcggggccactaccggtctccgcgtcttggtggtagtggtcccccgggcc cagctgtcttttcttttatctctttgtcttgtgtctttatttctacactctctcgtctcc gcacacggggagaaaaacccaccgaccctgtggggctggaccctaca >LTR22B_ERV2_Homo sapiens tgtaggggttcagtcaggctggtgggaaaaatattagagatagttatagaaatagacaca aaccttcttggaaggccgggaagtttgcataacttcggtaatagatctggctgaaggcag cctaatccctttacctttagttaaataaattagagtagaaacaaaggaatgtagaggagt ttatctagmtagcttgtttactcatgtggtcytaagactaacctttgatctacngcaggt gcttaattgctttctacttgggaagtccacaatgtcaattaccctctagtggtgttgact caagcntttgtcaattaatctttactgaataaatgcgagtctcactggctggtcggcaac tgtttacagcactctcctgggagtctgtaagcggcctggacmctcagctggactggcaaa gcagaatatctgtgtgtcagtgtactttattcatccgtcactgggtcagggtctgtggga cagactcccaca >LTR14B_ERV2_Homo sapiens tgggagaaaagctgagtgttgggaaaagctgaggcagggcttgcatgtctgacataatgt aaaagagtcttggaacatgtccggggtccagggtctaaaacccctcgtggcctttggaac accaagctctgtgctaaagggtggaaggctaccctgacgcaccataatctaagcccaggg cataaaacccctcgtggcttggatagaatccagggctcgtggcctctggaatgtgtctag acttgctggctccttgctccttgctctcccaggatcgattgtatcttgagttaaaagaac ctgctctccattatctcaagtagcagaacatgttccatatgcctcaaaggaaatgctaaa ccatcacagctgtagatcatgcgcttaatgcaacttgccctttcgacccccacattctca ccacctgtttctttgtttgatcaccaataaatagtctgggcttccagagctcggggcctt tgcagcctccatacttagcgttggccccctggacccactttctctctcaaactgtctttt ctcattcctttgactccgccggacttcgtcacccccacgacctggtgttgggtctgatca ccccaaca >LTR22A_ERV2_Homo sapiens tgtgggagatcggtcagagtggtgggaaaaactatagggaaaggacgcaaaccttctgaa aggtcagaaggttctgcagagccccgggggagaatagctgaaggcagctgttctataacc ctgaggcagagggcaaggagtaggtacaagggagtgtaggggaatttatcttaaacaggc ttgtttacttatgttgaccaggaactgacctttgatcatccgcgcgcgtgacgttccctg aaaggggaacaataaatgttaattacccgcaggttgtgtttgctccaggttttcggcatt gtgcctgcactgaataaaagcaagcagctccagcttctcggggctgctctctggccacta gagccaggcagtcacctagctgctcttacgctgcatacctgtgtctgagtactcatttca tccatcggtcggccagggtctgcgggacagacccggca >LTR5B_ERV2_Homo sapiens tgtagggaaaagaaagagagatcagactgttactgtgtctatgtagaaagggaagacata agaaactccattttgacctgtaccctgaacaattgcctttgccctgagatgctgttaatc tgtaactttggccccaaccttgagctcacaaaaacatgtgttgtatggaatcaaggttta agggatctagggctgtgcaggatgtgccttgttaacaaaatgtttacaggcagtatgctt ggtaaaagtcatcgccattctccagtctcgataaaccaggggcacaatgcactgcggaaa gccgcagggacctctgccctggaaagccaggtattgtccaaggtttctccccatgtgata gtctgaaatatggcctcgtgggatgggaaagacctgaccgtccacccagcccgacacccg tgaagggtctgtgctgaggaggattagtaaaagaggaaggcctcttgcagttgagataga aggaaggcctctgtctcctgcctgcccctgggaactgaatgtctcagtataaaacccgat tgtacatttgttcaattctgagataggagaaaaaccgccctgtggcgggaggcgagacat gttggcagcaatgctgctttgttattctttactccactgagatgtttgggtggagagaar cataaatctggcctacgtgcacatccaggcatagtaccttcccttgaacttatttgtgac acagattcctttgctcacatgttttcttgctgaccttctccccactatcaccctgctctc ctaccgcattcctcttgctgagatagtgaaaataataatcaataaatactgagggaactc agagaccggtgccggtgcaggtcctccgtatgctgagcgccggtcccctgggcccactgt tctttctctatactttgtctctgtgtcttatttcttttctcagtctctcgtcccacctga cgagaaatacccacaggtgtggaggggcaggccaccccttca >LTR3A_ERV2_Primates tgtagggagccgaaggccngtgggacgtgaccaactcagcattccactggaggctatatg atcaaacagcaaactgtttatcatgaatgcaggatgtgggcaaactcacgactgcgcctg ccgccagaaggtttgctgagggcaatcactccctggcgccgggctccttgaggttatcta ctgggacatctagagcctgttgttcgaggaatgcagtcttgcaagcctactctggaccga gcagctgaccccttcttccacccccccttctcactatctcttttgcctaataaatacgga gggctgtgtaaagctcagggcccttgtccactagaggcaaggtgccccctgaccccttct tccaaatatactcttttgtctcttgtcttttattcccacgttcgcccccctttgttcagt cccccaaggtccgtgcgggttacatagtggcgccccgaacagcgacagaatcgggtgctc aaca >LTR13A_ERV2_Homo sapiens tgtgggcggaggattaccyaggtgccgaggcaagagactgaaggcacaaactgtttcagt ataataaagaaaatagttagaataagaatagtcataatacaaattagatatagagatgat catggacaattatcaatcattattataaacattattaatcattagcttttaatattactc tttgttgcattactaatataacctaggaataaccggcgggtatagggtcaggtgctgaag ggacattgtgagaagtgacctagaaggcaagaggtgagccctctgtcacgcccgcataag ggccgcttgagggctccttggtcaagcggtaacgccagtgtctgggaaggcacccgttac ttagcagaccgygaaagggagtctcctttccttggaggagtcagggaacactctgctcca ccagcttcttgtggraggctggatattatccaggcctgcccgcagtcatccggaggccta aacccctccctgtggtgctgtgcttcaatggtcacgctccttgtccactttcatgttcct cccgtactcctggttcctctttgaagttcgtagtagatagcggtagaagaaatagtgaaa gtcttaaagtctttgatctttcttataagtgcatagaagaaaacgctgacgtatgctgcc ttctctctctgcttcggctacctaaaagggaagggccccctgtcctatgatcacgtgact tgcttcaccttgtcaatcacttagaagattcaccctccttaccctgcccccttgtcttgt atgcaataaatatcagcgcgcccagccgttcggggccactaccggtctccgcgtcttggt ggtagtggtcccccgggcccagctgttttctctttatctctttgtcttgtgtctttattt attacaatctctcgtctccgcacacggggagaacacccgctaagccccgtagggctggac cctaca >MER11C_ERV2_Homo sapiens tgttgcgggaagtcagggaccccaaacggagggaccggctgaagccatgrcagaagaacg tggattgtgaagattttatggacatttattagttccccaaattaatacttttgtaatttc ttatgcctgtctttactgcaatctctaaacataaattgtaaagatttcatggacacttat cacttccccaatcaatacccttgtgatttcctatgcctgtctttactttaatctcttaat cctgtcagctgaggaggatgtatatcgcctcaggaccctgtaataattgcattaactgca caaattgtacagcatgtgtgtttgagcaatatgaaatgtgggcaccttgaaaaaagaaca ggataacagcaattgttcagggaataagagagataaccttaaactctgactgccggtgag ccaggcagaacagagccatatttctcttctttcaaaagcaaatgggagaaatatcgctga attctttttctcagcatggaacatccctgagaaagagaatgcgcacctrggggtaggtct ctgaactggcccccctgggcgtngcctgtctcttatggtcgagactgcagrggtgaaata gactccagtctcccatagcgctcccaggcttattaggaagaggaaattcccgcctaataa attttggtcagaccggttgatctcaaaaccctgtctcctgataagatgttatcaatgaca atggtgcccgaaacttcattagcaattttaatttcgcctcggtcctgtggtcctgtgatc tcgccctgcctccacttgccttgtgatattctattaccytgttaagtacttgatgtctgt cacccacacctattcgcacactccctccccttttgaaaatccctaataaaaacttgctgg tttttgtggcttgtggggcatcacggatcctaccaacgtgtgatgtctcccccggatgcc cagctttaaaatttctctcttttgtactctgtccctttatttctcaagccagccgacgct tagggaaaatagaaaagaacctacgtgattatcggggcaggtcccccgata >LTR5_ERV2_Homo sapiens tgtggggaaaagcaacagaggtcagattgttactgtgtctgtatagaaagaagtagacat aggagactccattttgttctgtactaagaaaaattattctgccttgagatgctgttaatc tatgaccttacccccaaccccgtgctctctgaaacatgtgctgtgtcaaactcagggtta aatggattaagggcggtgcaagatgtgctttgttaaacagatgcttgaaggcagcatgct cattaagagtcatcaccactccctaatctcaagtacccagggacacaaaaactgcggaag gctgcaggggcctctgcctaggaaagccaggtattgtccaaggtttctccccatgtgaga gtctgaaatatggcctcgtgggaagggaaagacctgaccgtcccccagcccgacacccat aaagggtctgtgctgaggaggattagtataagaggaaagcatgcctcttgcagttgagac aagaggaaggcatctgtttcccacccatccttgggcaatggaatgtctcggtataaaacc cgattgtacgttccacctactgagatagggagaaaccaccttagggctggaggtgggaca tgcaggcagcaatactgctttgtaaagcattgagatgtttatgtgtatgcatatctaaaa gcacagcatttaatcctttaccttgtctatgatgcaaagacctttgttcacgtgtttgtc tgctcaccctctccccactattgtcttgtgaccctgacacatctccctctcagagaaaca cccacgaatgatcaataaatactaaggggactcagaggctggtgggatcctccatatgct gaacgttggttccccgggcccccttatttctttctctatactttgtctctgtgtcttttt cttttccaagtctctcattgcaccttacgagaaacacccacaggtgtggaggggcaaccc accccttca >MER9_ERV2_Homo sapiens tgttggggaacaggcccccaaaatctggccataaactggccccaaaactggccataaaca aaatctctgcagcactgtgacatgttcatgatggccataacgcccacgctggaaggttgt gggtttaccggaatgagggcaaggaacacctggcccacccagggcggaaaaccgcttaaa ggcattcttaagccacaaacaatagcatgagcgatctgtgccttaaggacatgctcctgc tgcagataactagccaaaccattcctttatttggcccatccctttgtttcccataaggga tacttttagttaatctaaaatctatagaaacaatgcttatgactggcttgctgttaataa atatgtgggtaaatctctgttcggggctctcagctctgaaggctgtgagacccctgattt cccacttcacacctctatatttctgtgtgtgtgtctttaattcctctagcgccgctgggt tagggtctccccgaccgagctggtctcggca >LTR14_ERV2_Homo sapiens tgttgggaaaaggacttgtggggtgcctgtataaactggccataaaaatatgggacaata agttgtggaaagccacaagaggcctctgaggagaaaagcctcctaattgccacgctcaga gcgagacctgctctctcttatctgtaaacactgtattcaaggagaaagaccctcctttga agcattggaatgtggacagacgtgcaggctcctagttaagcccactcccactagctactc tccgataagttaaagatatgctgtttgagcacaaaggagattcatttaaagcgcttctgc tgtagattatgcctgtgacgcactgctaccctttcactgttttgccctgaacatctgctt cttagatctaagttattgtactcaataaatagtgtggagaccagagctctgagccttttg cagcctccattttgcaattggccccctggcctccactctttatgaactcttaacctgtct cttctcattcctttgtcaccaccagacttcaggtaccctacaggtggtgttgaggctggt ccccaaca >LTR3B_ERV2_Homo sapiens tgttgcaggccgaaagagtgagggtcgtgatcaactcagtataccactggaggctatatg agtaaacagcaaactgttctcatgaatgcaggatgttggcaaactgacaaactgcgtctg ccgcccagaaggaatgctgagggcagtcacgncccaggcgcaagtgtttcttgtgattag gcacatctgaagcctgttagcaataatgtgaacctgtgatcaatcaagcagctgaccaat cgttacctcctcctccctgctctttctacccaataaatacgaagggctgtagaagctcag ggcggctgcctttgctcactagaagcagggagccctcttcttcttccctggaccccttct ttaaaacagtttcttttgtcttaagttttcatttctgcgttcgtcccccttcgttcagtc ccgtagtgacggtctcaagtagtaacagtagtaactgtcgtagtgacggtctcaagtagt aaccgtggcagtctgccaca >MER11B_ERV2_Primates tgttgcgggaagtcagggaccccaaacggagggaccggctgaagccatggcagaagaaca tggattgtgaagatttcatggacatttattagttccccaaattaatacttttataatttc ttatgcctgtctttactgcaatctctaaacataaattgtgaagatttcatggacacttat cacttccccaatcaatacccttgtgatttcctatgcctgtctttactttaatctcttaat cctgtcatcttcrtaagcttcatgagctgaggatgtatgtcgcctcaggaccctgtgatr attgcgttaactgcacaaattgtttgtacagcatgtgtgtttgaacaatatgaaatctgg gcaccttgaaaaaagaacaggataacagcaattgttcagggaacaagagagataacctta aactctgactgccggtgagccrggcrgaacagagccatatttctcttctttcaaaagcaa atgggagaaatatcgctgaattctttttctcagcaaggaacatccctgagaaagagaatg cgyacctaggggtaggyctctgaaatggcccccctgggagtggcctgtcttttatggtng aaactgcagggatgaaataarccccagtctcccatagcgctcccaggcttattaggawga ggaaattcccgcctaataaattttggtcagaccggttgtctgctctcaaaaccctgtctc ctgataagatgttatcaatgacaatgcgtgcccgaaacttcattagcaattttaatttcg ccccggtcctgtggtcctgtgatctcgccctgcctccayttgccttgtgatattctatta ccttgtgaagtacgtgatctctgtgacccacaccctattcgtacactccctccccttttg aaaatccctatttaatttcgccccggtcctgtggtcctgtgatctcgccctgcctccayt tgccttgtgatattctattaccttgtgaagtacgtgatctctgtgacccacaccctattc gtacactccctccccttttgaaaatccctaataaaaacttgctggtttttgcggcttgtg gggcatcacggaacctaccgacatgtgatgtctcccccggatrcccagctttaaaatttc tctcttttgtactctgtccctttatttctcaagccagccgacrcttagggaaaatagaaa agaacctacgtgattatcggggcaggttccccgata >LTR3_ERV2_Homo sapiens tgttgggagctgaaagmctgagggtcgtgaccaactcagcattccactggaggctatatg atcaaacagcaaactgtttmtcatgaatgcaggatgtgggcaaactcgcatctgcncctg ccaccagaaggtatgctgagggcagtcactccctggcgccagtgctccttgaggttatct actggaacatctggagcctgctgttcaaagaawgcagtcatgcgggcctgcgntaaatca agcagctgaccgacaaccacccccttctccctatcccctctacccaataaatacgaaggg ctgtagaagctcagggcccttgttcactagaagcaaggagccccctgaccccttcttcca aacatactcttttgtctttgtctttattcccgcgtttgtcctcctttgttcagtccaaca gggwctgcggca >LTR5_Hs_ERV2_Primates tgtggggaaaagcaagagagatcagattgttactgtgtctgtgtagaaagaagtagacat aggagactccattttgttatgtactaagaaaaattcttctgccttgagattctgttaatc tatgaccttacccccaaccccgtgctctctgaaacgtgtgctgtgtcaactcagggttaa atggattaagggcggtgcaggatgtgctttgttaaacagatgcttgaaggcagcatgctc cttaagagtcatcaccactccctaatctcaagtacccagggacacaaaaactgcggaagg ccgcagggacctctgcctaggaaagccaggtattgtccaaggtttctccccatgtgatag tctgaaatatggcctcgtgggaagggaaagacctgaccgtcccccagcccgacacccgta aagggtctgtgctgaggaggattagtaaaagaggaaggaatgcctcttgcagttgagaca agaggaaggcatctgtctcctgcccgtccctgggcaatggaatgtctcggtataaaaccc gattgtatgctccatctactgagatagggaaaaaccgccttagggctggaggtgggacct gcgggcagcaatactgctttgtaaagcattgagatgtttatgtgtatgcatatctaaaag cacagcacttaatcctttacattgtctatgatgcaaagacctttgttcacgtgtttgtct gctgaccctctccccacaattgtcttgtgaccctgacacatccccctcttcgagaaacac ccacagatgatcaataaatactaagggaactcagaggctggcgggatcctccatatgctg aacgctggttccccgggtccccttatttctttctctatactttgtctctgtgtctttttc ttttccaaatctctcgtcccaccttacgagaaacacccacaggtgtgtaggggcaaccca cccctaca >LTR22_ERV2_Hominidae tgtaggagatcagtcagggtggtgggaaaaattatagtagaaagatgcaaaccttcttgg aaggctgggaggttttacaaaagcttcggaaaaggatttggctgaaggcagccaaattct cttatccagtgcctgaaagcttaggttagataacaaggaaatgtaaagaaattgatctag ataagttagtttacttaggcctcggaacctggcctttaatcatctgcatgcaggactgct ctctccggggggggggcgaccatgttaattacccacaagtgtgttgactcaaagcctttg tcattaaatctgtactgaataaatgcccgcagcgccggcttgtcagggccacggctgctg tgactctttacagcaccctcctcggtgtctgtgagcggcccggtcccctagcccactctt tcactggatacctgtgtctgagtgcattttttcatctgtcactcggccagggtctgcggg tcagacccggca >LTR14C_ERV2_Homo sapiens tgtgggaaagagagtttctggggtgccagttgagttggtctcccctgtgtgagacaccca tgggaagccatgggcggcctctgaggagaaaagtctccttattgccttcatgtctttatg ccccgagagcataaccgctcagcggcattccacaggttgctcagggagataacactccct tgaagcagtggagtataatcaaacatcttggctcctcctgaaacccactcccacccgttt cagtcccgataagttaaagatcttaagtagtttagacacacgcctttgctcaaggaaatt cacagaaaccgccactgctacacatcttatcgaatgactcacgagttctccttcactgat taatccttttcctcatcccttcctccccctcccatctgccctaagaacaaagagcttgta aaccaataaattgggtggagcccaagagctctgggccgtgagcaagcctccgatgctctg gtcccctggacccgccttttaaacgcttattctgtctctttctaactcctttgtctccgc cggactcggggtacccactgggtggtgtggggctggtttccccaaca >LTR14A_ERV2_Homo sapiens tgggagaaaagctgagtgttgggagagaagctgaggcagggcttgcatgtctgctagact tgctggctccttgcttctagcactcccattatctcaagcagccatatgtttctcattcac ttgatacactgtttcctttcaacccccacatcctcaccacctgtttctttgtttgagcac caataaatagcgtgggctcccagagctcagggccttcgcagcctccacactcgcgatggc cccctggtcccactttctctctcaaactgtctttttctcattcctttgactccgccggac tttgtcgcccccacgacctggtgttgggtctgatcaccccaaca >LTR22C_ERV2_Primates tgtaggggttcggtcagggtggtgggaaaaattataagaagaaattataggaaatagaca caaaccttcttggaaggccgggaggttttgcaaaagcttcagkaawgggtttggctgaag gcagccwaattctcttatccggagccwgagagcwwagggtagataacaagggaatgtaaa ggagtttatctagataagcttgtttactcatgtggcccgaaamctgacctttaatcattc gtgcgcaggactgctctctactcggggggcggccatgttaattacccacaagttgtgttg actcaaagcctttgtcattaaatctgtactaaataaatgccmgcagcgccggcttgtcag ggccacggctgctacaactctttacagcaccttcctgggwgtctgtgagcggcccggtcc ctcagctggactggcaaagcagaatatctgtgtgtcagtgtactttattcatccgtcact cggtcagggtctgcgggtcagacccggca >MER9B_ERV2_Homo sapiens tgttggtagcaagccctaagcctgtcataaacaggccttaaagaaactggccataaacag gatttctgcagcaatgtgacatgctcatgatggctrtcatgcacactgctaraagttgtt ggtttactggagcagggcaaggaacacctggcctgcccggagcagaaaactgctcaaacc acaaacaatagcaggagcggcctgtgccttaacaacatgtttttgctgcagataatcagc cagagcctgtttctctrctccttgctaagaatgctttgtttcccataaggaatgctttta gctaatctataatctatagaaacaatgcttatcactggcttgctgtcaataaatatgtgg gtcaaactctgtttgtggctctcagctctgaaggctgttagccccctgattcccacttta cactctatttctgtgtctttgtctttaattcctctagcgccgctgggttagggtctccac gaccgagctggtctcggca >MER11D_ERV2_Homo sapiens tgtagggagaccccctgaaactattgctacggaataaaagatgaaatgctcctgattatt gtaaatacaaaattgcatgcaggattgtgtaaagacaatgccaggttggactgccagaac gagccaacagcgcgtgatgtgcttccccctgcagagagcctatgaatggacgtgcagtca gggaggtttcacatcaccaagattcctatcccagaaaagcagatgttcatagctctggga atggaatgcgacccttgtggagagcctataaacggacgcatggggggcgcctgtccatat ggataagatagggctataaacgccctcatcttgccacggctcttctaggcctctttaggg ttaaggcatactcccttctgagaatttctggtctaaccggttgtctagcttcacgtcctg tttccatggattgtttgtaaccagcttttgttgcaattgttactgctgattaatatcttg ctaatcataggttatggaaagaytgtgtttctgttttaaggctctgttagaaattactga cgcacacactatattgtaaattcttatctctgtatactgtacttctacatacaaatgtac tgtacttctacatacaaatgttatgttaaagaattacttcatccccatgtgaccatctca cctcataatcaaatgaccctaaatccctcactaacctacccccgccctcactaaacttaa taataaatgctggtatatccagtgcattgttggcaccgtgggaccagaaggcggtgaccc ccctggacccagctttcactatcttgtgtgtgtctattatttctcaacctgccgatccgc ctaggagcaaagagagagccccgttgcattgcgggctgctggccagatcccgcaata >LTR5A_ERV2_Primates tgtagggaaaagaaagagagatcagactgtcactgtgtctatgtagaaagggaagacata agagactccattttgaaaaagatctgtactcngaacaattgctttgcctgagatgctgtt catttgtagctttgccccagccactttgccccaaccactttgacccaacttggagctcac agaaacatgtgttgtataaaatcaaggtttaagggatctagggctgtgcaggatgtgcct tgttaacaaaatgtttacaggcagtatgcttggtaaaagtcatcgccattctccagtctc aatnaaccaggggcacaatgcactgtggaaagccgcagggacctctgccctngaaagcag ggtattgtccaaggtttctccccatgtgatagtctgaaatatggcctcgtgggatgagaa agacctgaccgtcccccagcccgacacccgtaaagggtctgtgctgaggnggattagtaa aagaggaaagcctcttgcagttgagatgagaggaaggccactgtctcctgcctgcccctg ggaactsaawgtctcggtgtaaaacccgattgtacatttgttcaagtctgagataggaga aaagctgccctgtggcgggaggcgagacatgttngcagcaatgctgccttgttattcttt actccactgagatgtttgggtggagagaaacataaatctggcctacgtgcacgtccaggc atagtaccttcccttgaacttanttatgatatagattcttttgctcacatgttttcttgt tgaccttctccttattatcaccctgctctcctantacattcctttttgctgaaataatga aaatcgtaatcaataaaaactgagggaactcagaggccggtgccngtgcangtcctcggt gtgctgagcgccggtcccctggacccactgttgtttctctatactttgtctctgtgtctt atttcttttctccgtctctcatcccacccgactagaaatacccacaggtgtggaggggca ggccaccccttca >RLTR20B3 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------TGTTGTGGGTT-TGGTCTAATGCTG--- CTTG-TATTATGTTAATTT--GGGTCC--CCAAAATTG----------CACGAGAATCCG CA----CGTCCGCACGTAA--------GACACTGAGGGACCCTGCCCCC----AGTTG-- -GTT-----CTGATTGGTAAATAAAGT--TGCCG-GCAG------CCAATG-GCTGGGCA GGGCAGAC-AG-AGG-CGGGACTTTTAGGATTCC-CGGGCAAG-GGACTGAGG---GAGG AAGGAAGAAGGAG---ATCCGCCATGCC--GGGAG-----------AAGGAGAGAGACGC CACGCC---------------------TGAGAAGGTGCAGGACAGAGA-GCATAGCCGCC ATGTAG--GAGCCGGGG----------------GANAGCGGCCCAAGAGGGCTGCNC--- -------------------------------------------GNCTGGGT----CCAGG GCAGCAAAGATGGAATATAGGTTTTAGTA---------------AGTAATAACTCGGGAA TATCGG-AGGGAGGT--GG--ATTA--GCCACGTGGAGGTTAGGAAGTGGCCCAGCCATT GAGCTGTTTAAGGCATATCA-AAAT--------ATAAAGG-------------------- --------C-TGTGKKTGT-----------------------GTCTTTCATTCGGGAACC CAGAAC----------ATTGGGGCGGGTAGCGAGGAAC-GCGCC--GCCGCCGCCGGGAT CGATTTGAGTAGTTTAATTGGGTACTGCTACA---------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR46B ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ TGTGGAGAGCC-GCAATAACATTTACCATCTTAAGATGGCGCTGGCTCCGCAGTGCCTTA TGCCACCTAAACAAAGAACAAGCTATATGCGCATGTGCTAAAAGCAAAAACCCGCCAAAA GTCACCA-------------------GCCCATTTCCGGGGCACCRGTCCATCYCCCAGGG CACTAGCCCAACCCCTGGGGGCTTTAGCCTATCCCCAGGGTGCATGAGGATCATGGGTGT T--------------------GCTACCAGTCCTAGTTTAGACACGTCACCAAAAAGTATT TAAGCCACACACTTTCTGAGCCTTCTTTGTCTACCTCAATATGTTATAGAAGTAAAAGTT AACCACGGAAGAATCTGGTGTGTCCTGTGTTTATTTCCCGCGGGACGGGGATAAGCTCGG GATA-------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR9A3 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --TGTGCCC-TTCCCCCA----------------GCCT----TGAGTAGGCTAAACAGAC CTT--------------AAGTGG---TTTT---ACACCCTAGC------TGG--AGTTGA ATTTGCAATTTCCTACA-------GGAG--TA--------GACTGCCTGCT--------- -----------GAGCTTGCTTTGCAACTCAA-TCCAGCTGAAAC----AAAGGATGGGTC TGTGGGCTTTCCCTATATA-AACGCAGTGCTGAAT-------ATTA--AACTTTG---AG CCTTGATCAGAAACC-TTTGTCTTGGCTTCATCC----TTCTCTCGCACCGTCCTTTTTC ATT----TCCAGCCTCCCTTT---------------CAGGTAACCCA-GTTCATCCATGG CTGCTGGACAGCT-ACA------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RMER4A_LTR ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------TGTAGTGAGAATTCTGGAATTTT- -GGTTTCT-TTAAAAA-CACAGAAATATTATAAGAATGTG-----TTTT----------C GTTTTAATCCC-AGGTGTGGGGATATGGGGCTGCTTCGGACTGTCCGCAG----CAGCTG ACTATGA-----------------TTTGCCTCGTGCTCTAG--CAGAGGCGTGGTTTTGC CAGC-------------------------------TGCAGATAGTTTCTGCG-------- -------ATTGTGTGACGTTT-------------GGAATTCTGGGAACTTTTCAGAGGGT A---TATAAATGCTAGGGCCCCGA--NAGGCGGGGTTGGT--------GGTTGTTGGTCG TTCAGGGAG--GTTGGTTGTGGTTTGTTA-GTAGTCGTGCTCAAAGAAGAAACAAAAGGA AA---GAAATTAGAT------------------------------------TCAGGGATC TT------CCTA------------------------------------------------ ------------------------TCTCCTCTCTCCCCT-CTATCCTTCTTTCTCTCCTA TCTAGTGATAGGGGGTGAAACCGGGGGGATA--AA------------GGGTGGGAAAAAG AAGAACCCACAAAGTAGC-AAAGACCAGCTACA--------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR44E_LTR ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------TGCGGGAAGCGGGTGCGGCCGCATGGGCCAAGA--------TGTTTACT- -GCCTTGCCCGAGCATGCGCAG-TGAGG-CTGCATGCGT-------GGGCTGCCT-GCCA GGCTGGACTGT-TCCTCGTGATCCGGACCTGTCAGCCTATCNGTGACCGACCTGAGCTCG TGCCTGGAGCGTGTGTGAATTCTGATTGGATGAGGTGGGGT--GGAGCTAGATG--AGGT CAGTCG----------------------GCGCGAGTATAGGAGTTTGGTTGTTGTT-TAG CCCTTGCCCTGAGTAGAAGCTAGCTGTAGTAAGAGAAGCTGTTGTAAGGGGAGTNGTT-- ------------------------------------------------------GTAAGA AAAGCTGCAAGAAGGATGGAGG---------------AAGAAGAAGCTGCTGGGGAAGAG AGCTGTAGGAGAAAAAGCC-ACAAGTAAAGAAGTTGCTGCGTGAACCCGACTTGGTGTCC GTGTCGTTCNTGTCTCCGCCGGAGTGGAGAT-GACCTGCGACA----------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR13D3 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------TGCCACACCCACTCCAGTGGAG-TCTGCGTGACAAGTCC-AAAAGCTTGGCCG CAG--TCCTGAGGCA-AAAAGTTTCACGGAAACT-GGTCTCCTGGAGAGTCTTTGGCAT- --CCC----------ATAACACGGATGTGGTCCAGATT--TGTCCTTGCGATAGTC-GGT GGAGGGTTTTG-TGTGCTTTCTTT-CAGTATTGTTTT-ATTA--TAGGTGCCCCCAAGGA ATGATTTGA-CAAATAGCT-AAGTTAGATTGAACATT-----GCTTCCTGGCC-TCCACC AGTGTCCCAA-TATCCTAGGCAATCGTTGA-GCCGACCCTGGGCTTGGAATTTCGTAAGA ATGTTACTTATTCAG--ACA-----AAATGCCTCCAGTGTTGAAAGAGAGATAGTGAAAG AAATCAGGCAT--TGCAGTTTACTGGATAAGAGTTAGAAAT-TTCAGGGCAAGTTCA--- -----ACAAAGTAAACTTAGAATTCTCATTACAGTCA---TGTATGGCAGACTACATTAC ATAATAGAAGAAAGTTGGTGGGCTCCTCTGGTAAATGGAGGTTCCCCACAA--AACACTT -AGAA-----TAACAGCTGAGTCACTCCC----ATATGCAGGAATTTACAATGGTCTAGG AAGAAGGTTGGGTTGTGGTTTAAGAAGGAACTAGAGTATTGTATTATTCATGAAAAGGTT AGCAAGAACGGAACCCTCCC--TGGTGCATACTTTCACAAGGCCCAGAAGAATAGCATAG TTAGGTATTTACTAAGGGACCCCTGGTGGTGGGTTATACAATAGACTAGAATTGGAACTA TGGCTAGGGTGTGAAAGCCCTTGCCCCTGGGGCGTAAAGCCCTCACACCTGGCTTCTAAG AATA-AGCTGACTTTAGATA-GGGC-TGATTTTTATCTCAGTT-GTAACCACTGCCTGGT TCCTGCCAGTTTTT--ATGTATGCATTTT-TCTGTTTTGTGTAAA-GAGTCATTATGCAT CG-GATGACCTCA-ATGTATCTTGG------CTGATGTAT-CACCTAACTTCCT-TGTTT T-CTTCTGTAATGACTATATAAGTCTGATGCTCGCTTTGAG--AAATTACATTCAGATTC -AGCACTC---TC--TTGTGTTCGTGTCTGT--TTGTCAC----------TCGCTGACTC CT-TGCCCACCTG--AGTACCGGGA--CCCTGATTTCTCCCCTGGGTTGAGGGACCC--C GACTGAGTCC-AGCCCGTGGCA--------------------------- >RMER17A ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------TGTGGGGAATTGCAGGCTGGT NTCCAGTTGAGCTGAGGTCTGAACCCCAGTGGTGATAATTCACCTACATGACACGGTAGG CATTCCCTCATGCTCCTGGAACTCTGGCTCCTGCCTAAGTTACCGCCCCCCACAGCCCC- -CACAAGAGAAGCATGGTTAGTAGTCACGCAGGCAATG--TCCCAAGCTTCTGACCTTCA GGCTAGACTCC-TCCCCAGTTACCTAGCAACWGTAAAGACCATAAGAGGGGCTGCTCGGC CCCTCCTCGCTCTCTTACTTGTCTCTTCTCTTACTCCT----TTGTTCTCTTAACTCTCA CACTTCTTTC-TCCTCTTCCCTTTCTCTTTGTCTTCTCTC-CTCTCTCCTTTCTCTCTAC TCTTCTCTCAGCCT-TCTCTCTCTCTCTCCCTCTCCCTCCCTCTCTCCTCTCTTATACCC CTGCCTTTCTACAATAAA-GCTCTAAAACCATAGAGAGTCTCTGCTCATCAAGATCTGCT GGGCTCACTCT-CGTCAGTGTTGGGAACCTCTTCCCC-----CATCCTTCTCTCCCATAA CCCTGGTGGCTTTAGSAAAGTAGCTCTGGGGCCCCCAGGTAGGGCTGCCCCTTGGCCACC CCCCGAAGAGTGGGTCAGAGGCTTAGATG----CCCACCCAGGGATGAGTGGAAGGTAGA TAGCAGCCCTCCCACNNCTGACTGACCAGAGAACAGGTGGAACTCTGGCGGGGTGTGGGT CTTCCCCTTCCCCCTCTTCCCCAGGGCCCCCCACCYYTTTTTGCTCCCAACA-------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >MLTR25C ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -TGCCGGGTCCGGCATGGCTGCGTAAGGGGAGGTGTGACACAGTTCCTGCCCCTGGAGCA TCGCCAGGCCGTTGATCCCCACGATCCCCACGTGTGCTGATGGTTGCTGTTGCCCTGAAA CTGATCTGCTGTCTCTTCTATTTTACTTTCAATCTCTCTTTCTGGGGAATATACTTCCCC CATTACTCAGAGCTAATCACTCCATAATAAATGAAACAGATGCGGTTCTCAGGAATGAG- -GAATGGAGGTGGTCATGAGGCTGTGGAGGACGAGGAACAGGCCTTCCGCTTGGCCTTTA GGGCCATGGGA-AAGGATCTAGACAACATAACCACAGAGGCCATAAAAGCCTACATGGTC CTTTGTAGAAATAGTTCATTGCCAGACTTGGCCTTGAATTTGGAATTATGAGGAGATACA TGTACCCTCC-GGTCCAATGACTGCTGCATTAATTAGCCAGGGTGAACTTGGGGACATCA AGGATAGAGAGTTAAAGTGGTCTCAAGAAGAAAAGGCATGGATAGGAAAAGAAGGAATCT ATAAAAAAAAAAAACAAGCAAATGATAGATGGGTTTATTTTATAGGAGAAAGGCTTGTAT ATAGATCTAGAAACAAATAGTATTAGAAGGAGAGTATACGAGGCCATGGAATTGCTAGGA TGAGGAAACAAAGATTAGAGAATTAAAAGATGATGTATAAGCATATAAAAAGTTAGTACT TCGTTCTCCTAGCTACTTGAAGGATTGGAGATGACAATGCCTAGAGAGATATTAGAGAGA GCTAGCTGCTTTACTTGCATAAATTTTAAAACTTTGTAAGAAATCATTTTAACCTTAGTA GTCTGTCACCTTTCTGTTCTTACATGAAAATAGTTACTAAAGACTGCTGTCTGCTGTACC AGGAAACCGCAAGAGCTGTGCCCAGCTACCCGTGAAGAACAGGCTGTGTAAAAACTATAA GGAAATGTGCTTTTGCTTTGTGTTTAGTTTCTGTTTTAAGGAAGCAGGGGTTGGAACTAA TGATCCGGGATTCATAGAATTTATGTAAATTTAAGGATTTCTAAAATTAATATATTAACA ATGATCAAAGCCTTGATGATGTAGCTTTAGTAAATAAAAGACTGGGTTCAGGCTCTCTGG TCGGGAGAAGAAGAAGGCAAAAGAATGAGAAGAAAGAAGGAAAAAGAATGAGGAGAAGAG AGAAARGCAAAAGAAGGAGAAGGGGAAGGCTAAAGAATGAGAGGAGAGAAGGAAAGAATG AGAAGGAAGAAAGGAGARGAAGGAAGAATGATGAGAATCCTCGGGCAAAGAGAGAGCACT TGAACTGACAGCTTGCATCCACTACTGACTCCGAGTCATTATTGAATCAGCGCCACTCCC ATTCCCGCCTTTCTCAGGACCCTCCTCACGCTGAGGCTGGACCTCGGCA >RNLTR23 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------TGTGGGGAGCCGACTTGCCTGAGACCCCAACATTGAGCTA ATTAGGACAGANAAAGAACATATGAAAGTTCACCTAAAGGACAAGCTCAGTGGAAAAAA- -CCCAATGTTCTAGCTAAGCTTACAGAAGTGCCGATACCAATCTGGTGGTCAGCGTTGCT CAGTAACAAGG-CTTGCCAGAAGTGCTGATACAAATCTGGTGGTCCAACAGGTTTGCCAA GTGGAGGCTCCTGACCTTTTGTTGGGAGCTAGCTTCATACAGACCTAGGGCTCGTGACCT TTGCAAAAGAGCCAGCTTCCTACAGACCCCTACAGACCCAGGGCTTGTGACCTTTTGCTG AGAGCCAATTTCCTACAGACCCACGGATTGTGACCTTCTGCTAGGGGCCAACTTCCTACA AGACCTAGGCCAACATCCCGCAGGAGTGAGCCAACTACCCTATTGGCTAGTACATCAAGG TCTCCCGGCCCCCTGAAGACTTCCTCCTCCCCCTGCCTTGCTACTGTATATAACCAGAGC CTGCAAGCATTAAACTTGTCGCCTTGATCAGACTCTTGTCTTGGCGTCCTTCTTCGTGTC TCTTGTCCCCCATTCTCTTCCAGGTACCCTCTGGACCCTCGTTGACTGTCCTGCAGGACG GGACA------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >MLTR25B ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------------TGC CGAGTCCTGCTTGGCCATGTGGAAGGGACGGTGTGACATGGTTTCCTGCCCCTGGAACAG AGCCAGCAGGGCGTGGGCCTCCACTGAGTGTTGACGGTTGCTGTGGGCGTAAGGCTTGTT TGTATATATATATATATATTCGTATTCCTCTTTGCGTGAATGTCTCTATGTACATATTTT CATGTTCCTCCTTCGAGGAATGTCCTCTCTGCCAAGGTTAATGACTCCATGATAATCAG- -AGACAGCACGAGTCCGGGAGGCGAGGGTGTGTCTATATGTCTCAGCAAAATGGTAAATG CTGAGACCTTC-AGGACAGCCCTTAAGGCTGTGGGAAAGAACTCTGAAAACATGAGTTCA AAAATATATAATTTCTCAACTATGCAAAA-TATAAGGATGC--AATATGAATTATATAAG GAGCTTCACG-GACCTAAAAGAAC--AGAGGCAGCTGCACTATGAGCCAGCTTGTCAGAA AGATACAAAGGCAGG-----------------------------CAGA------------ ----------------------TACAAAGGCAGGCAGATTCCTGAGTTCAA--GGTCAGC CTGGGACAGAGCTAGTTTAGGCCCAGGCGTG--GTAGGAATGGTAATCTCAGGGCGGGAT CCCACCCAGCTAGCTTATT--GTCTGTGCTTA-CAAAGGCAGGCAGATCTCTGAATTCAT TTGCAATGTTAAAAAAAAAT-GT--GCTTGC-TGTCTCTTTCTAAGAATCAAGGGGCTGG GGTCATGGGATGCTGATTCATGGGATAATCAAAAGGGAACCTGGGGTAAATGACTGAATT GATATG---TAAA-TAAAAGACTGGGCTTTTGATCTGCGAGAGAATGAGCTATCCAGAGA GTTTTTTAGAATTGCAAGAGAAAGCTG--------------------------------- --------------------TCTCCAGAGAG----------------------------- -------AGCTATCTGGAAAGCTGTCTCGAGCAGAACATAGGCCGTCAGCTTGTAACCCA CGATTTGACTTCGAGTTGCCTTTTTTTCGCCGCTCCCAGACACCCCTTCCTCTCAGAACC CCTCTCCAAGCTGAAAAGGCTGGTCCTTGGCA---------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >ERVB7_2_LTR_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------TG--TAACCTCCCCCCCCCCCCC- CC---AGCCTG-AAATCTGGCTGATCAGGTTTGACTGTTAGCACCAGGAGAGCATCGGGG GTGGAGCCTGCCA--------------------CCCTA----TCGTTCTGCCACTC-CCA C----------------TGCTACTACCTGCCGCCTAGCTG--------TTCCGGAGCTAT CACGTG--------------------------------GTCACCTGA------------- ----------------------A-ACTGGACTCCAAGGATG-ATTTGGCGGGAATGGG-- -CCCCTCCCCCTTC-TTCATAACCCAGTGTCTCGG-------AATAGTAAAATT--GAA- CCTTGATCAGACTAG--TTGTCTTGGTTCCATTCTTT-CTCGCGCCGCCTAGATTCCCTC TTTTCT-TCCAGATT-CCAAGATGCCTC-----CCAGGCTAGAACCCAGACA--TGTGAG CCGCTGGCCGGCC-TCAACA---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR31_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----------------------------TGTAGAGAGAATATCTTGTGT---ATTGT-- -ATGGATGCATCACCTGTCAATTAAAAA--AGCCTATGG------GCCTATGGCTTAGGC AGG--AAATAG-AAGGTGGGACATCCGGGAGGCAGAAAGA-------------------- ---------------------------------------------------------ATT CTGGGATAGA-GC-----------------CAGGCA---------------------GGA GATTCACCCGGGAAAGATGTGAGGAG---ACA-GACACATGGTACCTG----------AG C---------------------ACAGGTAACCA---GCCATGTGGCAGAAT----GTAGA TTAAAATAAATGGGTTATTTTAAGTTATGATCC-----TAGTCAGAGAA-GAGCCTAGCT ATATGTGGCCAAGGTATTT--GTAA--ATATATT-TTGAGTCT--GAGTCTTATTTCTGG GAGCATGGGGCTGGGAGGAAGAACCCA------GACCCTAACTTCTACA----------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR20A ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------TGTTGGGAATT-GGTTCTAATGCT---- -------TTGTCTTANTTC---GGCTC--CCAAAAG---------------------CC- -----------GCGCTTCC-------AGAC-CTGAGGGTCCCTGCCCCC----AGCTG-- -GCTT----C-GATTGGT-AATAAAGAATTGCCGTACAG------CCAATG-GCTGGGCA GGG-AGAC-GG-AGG-CGGGACTTTTAGATT-GCGCGGGCAAGGG-ACCGAGG---GAGA GGGAGAGAGGAGA----ATCGCCATGACTCGGAGG-----------CAGAGGGA-----T CAGATT---------------------TAAGAGCT-GCAGGAGAGAAA---NCATCCAGC AATGTAGGTGGAAAGGG-----------------AAAGCGGCCCTAGG------------ -------------------------------GGGCGCTGCCCAGAAGGTAA----C-AGG GCAGCAAAGATAAAATATAGATTT-AGAA---------------GGTGTTAAGCCAGGAA TACCGG-AGGGGAGTGTGT--GCTA--GCCGCGGGGAGGTTTAGAAGT-GCCCAGCCATT GAGCTAGTCAAGGCATATCAAAA-----------TTAGCTG------------------- -------GTGTGKKTGTGT---------------------------TTCATTCGCGAATC CAGAG-------------AGCTCTTGGGCGGGTGCAGC-GCGCGCGCGACCCGCCGGGAG CCAAAGCGGTTTAACTAA-TTCAC-CGCTACA---------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR9C ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------TG--TNACCTCCT-CCAGCCTAG- GC---AGGCTG-GTTCAGACCNT-------ACGCCACTGAG-GCAGAGCCACCT--GCTG T-GCTGCTTCTCATCCCAG---------CAGT-CTCCT----TTGATGTGACA----CTG C------------------CTGCCACCTGCCN-GAGGCCGAACCGGTTCT-CCGAGATTT TCCGGAGTTAACT-GCA-ANCTGTGAATTTGGCGAGTTNCTGCTAAAAGGC--------- ---------------TGTTCTGACAACTT---GGCATCTTTATGACATCAAGAAA----- ------------CTTGGCGTGGCAGANTTTATTA---------TTA--AACATTT-GAG- CCTTGATCAGANTAG-CTTGTCTTGGCTCCATTTTTCTCTCGACC-GCCTAGTTTCCCTC TCTT---TTCAG-CT-CCAAGATGCCTC-----CCAGGCTCGAACCCNGACN--TGAGAG CCGCAGGCCGGCC-CCAACA---------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >IAPEY2_LTR ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------TGTGGAGAGCCGTGCCGCGAGCAATCGCGTGCGTGCCGTGAGCAATCGCC ATTATAAGATG-GCGCTGGCTTCCACTGCGCCT--------------------------- -------------AACTAGTAAACAAGCCTTA-TGCGC-------AAGTGC-AAGAGTGA -ACTC-----------ACGCCTAGTCA-CT-GCCCATCTCGCGGCGTAGTAATGGGGTGA TGGGCGAGCAACGAATCAGGAGCTGTCACGCCACATCAGGTGC-TGAAACGTCACGCTGC GGGCTATATAAGCAGCGCCATTTTCCCGGTTCGGGGTCTTCCCTC--------------- ---------------------C--TGATAAGTAAGCA------ATA--AAAGCTTT---- GCCGCAGAAGATTCCGGTTGT--CCTGAGTGTGT--TCTTGCCGGCGGGGACAAAAG-CT CGGGAT------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR13A2 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------TGTCAGGGCACTCTGGTGGAGTCAGCTTGTGAGG CAGAAATGCCAAAAAGCTGCTCATGAGAAATGAATTTCTAGGACTCTCCTCCTGGATATT CTGGCGAAA-GCCAACTCTCCAGTTTGGATC-GGTTTGTCAGGC-G-AAAAGCCTGGAAG CTGTTTCACGAGG-ATAAGAGTTCCAGG-GAAATTTTCCTCCCAGAG---TTATGGCAT- -CTCT--------TTCCCTAACCCATTATATTCAAATTTCCA---CCACATTAATCTAGT GTATAGATTCA-CGTGCACTCTATATAGTATTACCTT-ATAG--TAAATGCCTTTTAAGA TTGTAT---TCTAACATAG----CTAAAGC--------------CTTTTTCCAGTGTTCT TAGATTC--------CAGATA----------------------------GCAGCAAGGA- GCTTAACCTATTCAGTAACTAATTAAGCTCTACCATAAAACAA----------------- ---------------------TAAAAACACCTGCCA-TTT-ACTCAGCTGTCTGTA---- ---------------GATAGAGACTAAAAGTCTCACT---GAGATAGAAATCTTTTACT- ACAGGCTACATTCCATGTC-------AAGTATAAGTTGATATACTACCCTG---ATAAGG GGGAAA--CTCTCCAGACA----------------GGATAAGT-TTTA-CTAGACCTA-A GAATTTAGA----------GCTCTGTGATAACACATTA--------CTCTT---AAGGCC TGTCAAGAGTTAACAACCCC-CTGATGCTT---TTAACC--------------------- ------------------------------------------------------------ ---TTAAAGTGTGAAATTCTTGCCT-----------------------GGCATTAGG--- -------CTGATCCTAGGC---AGGGCTTGTT------------ATCCCTAATGTAAACA TTTAATTAG--TCCCTGCAAATTCCT----TTTCTGCTGTAACTG---GTGAATT----T CAGTGTATCTTGTCTT----TTTG-------------TGA-TTTGTATCCTCTGATAATT C-GTT----GTA----ATATAAGTCTGAAGCTCAACCAG-A--ACATTACATTCAGATCC -AACACC-ACTCTCG---TGTGTTTGACTGT--CTGTCATTTT-------CATCCGACTC CTTTGCCCATCTGC-----TTAAGAAATCCCG---TTCTTCGCAGACACAGGGACC---- --CAGAG----GGTCTGTGGCA--------------------------- >RLTR13D2 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------TGCCACACCCACTCCAGTGAAGACCTGTGTGGCAGGCCC-AAAAGCTTGGACG CAG--TCCTGAGGCA-AAAAGTTTCATGGAAACTTAGTCTCCTGGAAG--CCTTGGCAT- --CCC---------TGTAGCATGAATGC--TCCAAACT--TGTCCCTGCGTTAGTCAGGT GAATGGATCTG-TGTGCTTTCTTTTCAGTATTGTTTT-ATTAA-TAGGTGCCTCCAAGAA ATGATTTGAACAAATACCTTAAATTAGGTTGAACTTTT----GCTTCCTGGCCCTTCACC AATGTCC-GA-TGTCCTAGGCAGTCCTGGA-GCTGACCCTGGGCTTGGAATTTCGTAAGA ATGTTACTCATTCAG--ATG-----AAATGCCCCCAGTGTTGACAGT----TAGT----- -AATCAGGCATCTCACAGTTTGCCAGATAGGAGCTAGTAAT-CTCAGGGCTAGTTCA--- -----AAATAGTAAACTTAGAATCCTCATTACAGTCA---GGTATGGCAGACTACATTGC ATATTAGAAGAAAGTTGGTGAGTTCTTCTGACAAATGGAGATTTCCCTACA--GACACTT TAAAA-----GAGCAGCCAAGTTACTCCC----ATATGCAAGAATTTACAATGGCCTAGG AAGAAGGA-GGGTTGTGGTTTAAGGAGGAACTACAGTATTGCATTATTCATGAAAAGGTC AGCAAGAGCAGAACCCCCCC-CTGGTGCAAGCTTTCACAAGGCTCAGAGGAATAGCATA- -------------------------------------------------------AATTG TGACTAGGGTGTGAAATCCT-------------------------CACCTGGCTCCTAGT CAAT-AGCTGACTTTAGATA-GGGCCTGCATCTTATCTCAATT-GTAAACATTGCCTGGT TCCTGCCAGTCTTT--ATGTATGCATTTC-TCTGTTTTGTGT------------------ CA-GATAACTTCA-ATGTACCTTGG------CTGATGTGT-CACCTAACTTCTT-TGTTT T-CTTCTGTAAT----ATATAAGTCTGATGCTCACTTTGAG--AAATTACATTCAGATAC -AGCACTC---TCTCTTGTGTCCGTGTCTGT--TTGTCACCTTT------TCACCGACTC CT-TGCCCACCTG--ATTACCGAAA--CCCTGGATTTCCCTGCGGGTTGAGGGACC---- GACTGAGTCC-AGTCCGTGGCA--------------------------- >MLTR31B_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------TGTTGCAGGATTTTCCCTGTCCAATCAC--------ATTAGGGCAGTG-- -GGAGGCTTGTGATTGGACAG-G-AGAA-GGG-AGGCGGAG----CGAGGAGTTGAGG-- ----AGACAGA-GAG-AGAGGTCTC-AGGAG------GAGA---------GAGA-GAACC AGAATGGAGGCCGACGTG---------------------------------------GT- GTTATCAAA--AGGT------------TAGAATAAT-TGGGTTAA--------------- -----AGCTTT-ATCATTATCATTTG---GCTCTGAAATTATTGTATTG-GCAT-CTTGT A---------------------AATTGTGTTATTATTGATACATAAATCTG----ATTGG CTAATTA--AGCATTAAGA--GTCTTGATTCTACCGGGTAATTAGGTGTTGAGATG-GCT AACCA---GGGGTGCGTGG--GGCGTTGCGTGAAAGCGAGAGGAACTCGGGGTGGGGGGC GTCCGAGAGATGGCCCGGTGGGAGCCATGTG-GCCTCGCAGGGCTGGCGAGTTGGCGGGC -CGAGAGACCTAAGAGYGAGTGAGATCACCTGGCGCAGGG----GCTAGCTCTAGAGAGT TGTTGGCGGCG------GCAGGAGCGCGGGAGCGTGGCCTGGCCCCGCTGAGAG--TTGG CGGGTTCATTTTTT-AATATTTCC-CGCAACA---------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR13D5 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------TGCTACATCCACTCCAGTAGTGACTCGCATGACAGGCCT-AGAAACCTGGACG CAG--TCCTGAGGCG-AAAAGTTTCACGGAAACTTAGTCTCCTGGAA---CTGTGGCAT- --CCC---------ATA-TAACGAA--TGCTCCAAACT--TGTCCTTGC----------- GAATGGATCTG-TGTGCTTTCTTT-CAGTATTGTTTT-ATTA--TAGGTGCCTCCAAGCA ATGA-CTTGCCAAATACCT-AAGCAAAATTGAACTTT-----GCTTCCTGGCC-TTCACC AATGCCC---------TAGGTAGTCCTTGA-GCCGACCCTGGGCTTGGAATTCAGTAAGA ATGTTGCCTATTCAGTGACATTCAGAATTGCCTCTAGTATTGTAAGAGAGATAGTGAAAG AAATCAGGCAT--TACTATCTACTACATA-GAGTTAGAAAT-CTCAGGGCAAGCTTA--- -----GCAAAGTAAGTTTAGAATTCTTATTATAGTTA---TGTATGGCAGACTACATTAC TTATTAGTAGAAA-------------------------AGTCCCCCCCACACTATCACTT -AGAA-----TAAAAGCCAAGTCACTCCC----ATATACAGGAATTTACAATGGTTTAGG AAGTAGATCGGGCTGTGGTTTAAGGAGGAACTAGAGTATTGCATTATTCATGAGAAGGTT AGCTAGAGCGGAAC--TCCC-TAATTAGAACCATGACTTGGGCGTGAAAGCCC------- ---------------------------------------------------------TTG CCCCAGGAGTGTAAAGACCTC-----------------------ACACCTGGCTTCTAAG AATATAGCTGACCTTAGATA-GAGC--TGACTTTGTCTCAGTT-GTT-TTATTGCCCAGT TCCTGCCAGTCTTT--GTGTTTGCATTTCCTCTGTTTTGTGTTAA-GAGTCATTAAGCAT CC-GGTAACCTCATTTGTACCTTG-------CCGATGTGT-CACCTAACTTCCC-TATTT T-CTTCTGTATT-----AAAAAGTTTGATGCTCGATTTGA--CAAATTACATTCAGATAC -AGCACAC---TCCCTTGTGTCCGTGTCTGT--TTGTCACCCCTTTTC--TCGCCAACTC TT-TGCCCACCTGTAACAACCGGAACCCCCTGATTTCTCCCGCGGATTGAGGGGGGG-CC GACTGAGGCC-GGTCCGCGGCA--------------------------- >RLTR28_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------TGTTGTGGATT-TGGTCTAATGCTG--- CTTG-TATTATGTTAATTT--GGGTCC--CCAAAATTG----------CACGAGAATCCA CA----CATCCACATGTAA--------GACACTGAGGGTCCCTGCCCCC----AGTTG-- -GTT-----TTGATTGGTAAATAAAGT--TGCCA-GCAG------CCAATG-GCTGGGCA GAG-AGAC-AG-AGG-CAGGACTTT-AGGATTCC-TAGGCAAGAGGACGGAGG---GAGG AAGGAAGAAGAAGTAGAACCACCATGCC--AGGA------------AAGGAGAAAGAT-C CAGGCC---------------------TGAGAAG-TGCAGGAGAGAGA-GCATAGCCATC ATGTAA--GAGCCAGGG----------------AAGAGCGGCCCCAGGGGCCCCCCCC-- -------------------------------------------AACTGGGT----CCAGG GCAGCCAAGATGGAATATAGATTTTAGTA---------------AGTAATAACTCAGGAA TATCAG--GGGAGGT--GG--ATTA--GCCATGTGGAGGTTTGGGAGTGGCCCAGCCATT GAGCTGTTTAAGGCA--------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR11B ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------TGTTGAGGTTT--GGTCTGKTGCT---A TGTATTGTAATGCTAAATTCTGTATCC--GAAGATC--TAG--G----CCT----ACGA- --------GTGAATTCTCACATNTACAAGCNTT--TGTTGTGCAAACCTTGTTCCTTA-- -ATTTAAAACTATTGGTTAAATAAAAC---TGGCTACAG------CCAATT-ACTGGAGG AATTAGAGG-T-AGG--TGGGTTTTGAGTTACCTGGTTGGGGGT---------------- ---GAGAGAAGGAAGAAA-ANNAGGAGGRGAGAGG-----------AGGAAGCCGCCATC GA---------------------------AGGGGAGAAGGGCCATGAGCACATAGCCAGG AGAAA------------------------------------------------------- ------------------------------CAGCAAGTATCTGGGGT--AC----ACCG- TGGGGAGGTAGCCAGGCCAGCAGTTAGAAG--------------AG---TAGATTAGGGG TT--ACCC-CCCAGTA-AT--TAT----CA-----AAGCCAAATAAAATAA--CC-ATAG T-CTGAGTCTCATTTATTTGTAAGCTA------GT-CGGG----GATAA--GCTTACATT GGTTGTACTACA------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR43A ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------TGCCGGGAG CC---AAGCCC-ACTTATACACCCTCTGTTTCAGGAATGTTCTCAGGAATGTTT------ --CAGGCCCACTTATACAG--------CCTCT-GTTTC----TGGGAAACCTAGCCAGTT ATC--------------TGTTCTTATCAGT---ACACCTGCAA------TTT---GCGGT T--TANGGTTACAGG-----------AACCGA------AAGAACAATGGGA--------- -----------GGGTGGTGACGGTGATGAA--TTGGTCTTGGGCCCTGTGTGGCCTTCCC GCTTG--CTTGTCTTTATA-AGC-CACTGCCCTGA-------AATA--AAGTTTG--AGA GCTTGATCAG--ACA-ATCGACTTGCTCTCCTTC----TTTGCGCCTCCTGTCCC--CCA TTC----TTTCGCCCCCT------------------CCTCAGGTCTCCGCTGAAC--CCC CCGCAGGTCGGG--GCA------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR12B ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------TGTAGGCATAATGTTATTGTGCACTGTGTAAAGATT---ATCCTTGTATT---- ---ATTCAAATGCTGATTTCTCTGCCCCCTCATATCATTGGTTGCGAATCTGGACATGGC ATTGTAATGCTTATTCTAAGAATCTCCTGTCTCAATGTTGTGTAAACATTGCTCCCCA-- -TTTATTCTCTGATTTGTCAATAAAAA---GCTGATCAG------CCAATG-GCTGAGCA GAGGAGAGAAT-AGGGCTGGA-CTTCTG--ATCCCAGCCAGGGG---------------- ---AGGGGGGGAGAGAGAGA--------------G-----------AAGAAGAGAGGATT CGG------------------------CCATGAGGAGAGGGTCGACAG-GAGACACCATG GGAGAACCC------------------------ACACCTGGAGCAGAGAGAGCCAGATCA A---------------------TACTAAAAATGCAAGTATCTCGGGG--AT----TTTGG CTGGGAGGTAGCCAGATTAGTTTAGAGGAT--------------TAGAATAGATTAA--- T---AACTGCTCAGCTTAT--TGTG--CTGTAAAGCAGCTTGATTAAATAAATCTTA-TA GTCTCTGTCTCATTTATTTGGGAGCTA------GC-CAGGATAAAGAAA-AAAACTATCA CTTT---TTAAAAATTGCA----------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR20C_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------TGTTGGGGATT-GGTTCTAATGCT---- -------TTGAATTAATCT---GGCCC--CCAAAATT--------------GGGAATCT- -----------GCGTGTCC-------AAACGCTGAAGGTCCTTGTCCCC----AATTG-- -GTTT----TTGATTGATCAATAAAGAGCCA----ATGG------CCAATG-GCTGGGCA GGT-AGAC-TG-AGG-TGGGACTTTTAGATTTGCATGGGCTAGGA-ACTGGGA---GAGA GGAAGGAAGCAGA---GATCACCATGAT--GGGGA------------AGAAGAA------ -AGAC--------------------------------CAGACCTAAAG---GCCCGCCGA C-ATGTGAGAATCAGGG-----------------AAAGTGGCCACACG------------ -------------------------------GGCCACTTCCCCAATTGTGT----TTGGG GTAGCAGAGATGAAATATAGATTTTAAAA---------------GATGTTAACTCAGGAG TACCAG-AGGGGAGTGTTT--GCTA--GCAGCGGGAAGGATTAGAAAT-GCCCAGCCATT AAGCTAGTCAAGGCATATTAAAA----------TTAAGCTG------------------- -----------------GT--------GTGTGTGTGTGT-GTGTCTTTCATTCGCGAATC CAGAG-------------AGCTCTTGGGGGGGTAGGGCGAGAAGTGTGTGTGA------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR12A ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------TGTAGGCATAATGTTTTTGTACACTGTGTAAAAGTTT--ACCCTTGTGTT---- ---ATTCAAATGCTGATTTCTCTGCCC--TCATATC-TTGTTTC--AATCCAGACATGGC ATTGTAATGCTTATACCAAGAATCTCCTGTCTCAAGTTTGTGTAAACAATTCTTACCA-- -TTTATTCTCTGCCTTGTCAATAAAT----GCTGATCAC------CCAATG-GCTGGGCA GAATAGAGAAT-AGGGCGGGAGCGTCTGCCAGCCAGAGGAAGGA---------------- ---GAGAGGAGAGAGGGAGATTCAGATCAGCCAGG-----------AGGGATGGAGGATT TGGAG----------------------CCATGAGGAAGGGGTCCAGAGAGAGAGATCATG AGGAAAC--------------------------ACACCTGAAGCCCAAAGAGCCAGATCA A---------------------TAATAATA-TGCAAGTATCATGGG---AT----CGGGG CTGGGAGGTAGCCAGATTAGCATAGGAGGT--------------TAAGGTAGATCAT--- TT--AACTGCTCAGCT-AT--TGAG--GTG-----CAGCTT--TTAAATAAATCTTGGTT TTCTCTGTGTGGTTA--TTGGGGACTA------GCATAAGGTAAAGAAATACAGCCACCA GATTAATTCACTGCTTACATTT-----ATATTAAAGATAATTCATTTACA---------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR9A4 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -T---GTGGAG-GTTCTGCCCTGACCTGCATAGCAGGAGTTGCCGCATCAGC-------- --TATTTTTGCTATCACA----------------GCAC----TTGGTGGAATTTCCCCGC CCG--------------AGTTGGGAGTTCT---GCTTTTGGCC------TGATAAGAGAG ACCTGTGCTGAGAAATG-------GAAACCTA--------TGCCATTGGCT--------- -----------GCCGGCATGAGGTGATTTAC-GTCATCAGTCACGTCTAGGGGTTGGGCT TATGGTTTTTGCCTTTATA-AGCCTGCTGCTTTGC-------AATA--AAGTT-G---AG CCTTGATCAGATAC--TTTGTCTTGGCTCCATTC----TTCTCTTCATCCTTGTCCTTTA ATT----CCCAGACTCCCATT---------------CGAGGTACCTATGTTGACTGGTAG TCACGGGTCGACT-ACA------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RMER6C ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------TGTAGAGGAA-T-TTTAATCCAGCAACAT GGCTGCTCTGGCAAGGGATCACA-----TCCAAAGACCTTCTAGGTCTGTGTGATCTGGC TGGA-ATGCAGACACACCTT--------------------------TAATCCC------- -TCTGGCTGGAATACAGACATACCCTTA--GTACACACCTTTAA-TCCCAAACAATGA-- -AGGTAAAGTTAGTTTGTAGA---AGGAAGCAGCCA--TGTTTGA--AA-GTGATGTCTA ATTGAGGGGCA-GACAAAG----TGATGAATCAGA-GAAAGATTTGACAGAATGAGT-CA GAGATAGGATATGCCCAACTCTCACGAGAACAGCACAGGAA--A-GAGAGGCTACTTAAG -AGCAGCAC-----------------AGAGAGAGAGGGAGGTTGGGA------------- --------------------------------GGCAGTTTT-ACCAGGACAGTT------ ---------------------TTACAGAGACAGGT---T-GCAGAGAGAAG-----TAGA GGCAGGTAAAGACAGAATAAGCCAGAGAATGA-GAAGGAGCCAGAAGATTAGAACAGATT GCCAG--AGTTAGTTTG--------AGGCCAAGCAGAG-----CAATTCAGTGAGAAGCT GAGAGAAGCCAGATTGAATCAGTCAGCTTGG-AGAG--------GAGTTTG--------- AGCCAGAA-----CAG--CTGAGTTGAACC----AGCCAGCCAGAGTTCA-GAAAGAACT AG--------------AAAGGGTGAGCTTAT--TCAGC---AG--TAAGCCTCCAAGATG ACAATTACATCTGGCGAA-TAAAAGTTACTTTTACA------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR26C_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------------------------TGGGCAAGTGGGCCGTGCCA CCAGACAG------AAGAACTGGTAAGGTTGA-GTGAGCTCAG-----ACCCTGGGAAT- -CTCAGAGACTTGAGATCATGGCAGGAG-------TGGAGCCGCTCCCTACCCATT--TC TGTACCTGCTC-TGGAACACGTAA-CCACGAC-ACCCCACTGAGAGGA-----------C CATGGGCAGTCAGTCACGTAGGGATG--AAACACCTGG----AGTCCTTCCCCATGCAAA TAGAGCATCA-CTAACATCTCAAACT-----GAGCCAATAGGAAACACCTACCCCTAA-A TCCCACCCCACTCC--------TCAATGTTTATATA--GTCCCTGTCCACATGGAATAAA GCRCACAAG------TTATTTCACCGAGGATCGTCTGAGAGTGGCTGTTTTTACTGAG-- -CTGTAACACTT------GGGGAAGAGTTCTCT--CTCCC-------GAAGCATTCATCG CTGGAC----CTTGGACCCGCC----------------TTGGCTGGCCAGGCTCATGCAC T--GCTGCC-GCTGCCWCCACCTCTGC-----CGCTGGCACTGGCGCTGC---CGCGGTA --------------GCTGA---CGAGAGACCCGGGACCT----CGGCTACCT-------G CCCTGCGCAGGCCGCCC------AAACC---TCCTTGCTTCTCTTCTAAGAGCTGTAACA CTCCCGGCATTCCCGGCCGGACCAGAGCCCCGTGGAACCTATTCGTCCCGGTTCYGCTTT GCCCTCCAGGCAGACAGCAGACGACA---------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR20B2_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------TGTTGTGGATT-TGGTTTAATGCT---- --TG-TATTATGTTAATT---GGGTTC--CCAAAATTG----------CACGAGAATCC- ---------CCGCATGTAA--------GACGCTGAGGGTCCCTGCCCCC----AGTTG-- -GTT-----CTGATTGGTAAATAAAGT--TGCCA-GTGG------CCAATG-GCTGGGCA GGG-AGAC-AG-AGG-CAGGACTTT-AGGATTCG-CAGGCAAGGGGACCAAGA---GAGG AAGAAGGAGGTAG---AATCGCCATGCC--AGGA------------AAGGAATAAGAT-C CAGGCT---------------------TGAGAGC-TGCAGAAGAGAGA-GCATACCAATC ATGTAA--GAGCCAGGG----------------AAGAGCAGCCCCAGGGCCCCCCCCCCC C------------------------------------CCCCCTAATTGGGT----CTAGG GTAGCAAAGATGGAATATAGATTTTAGTA---------------AGTAATAACTCAGGAG TATCGG-AGGGGAG---GT--GTTA--GCAACGTGGAAGTTTGGGAGTGGCCCAGCCATT GAGCTGTTTAAGGCATATTA-AAAT--------ATAAGGC-------------------- --------TGTGTGTGTGT-----------------------GTCTTTCATTCGGGAATC CAGAAC----------ATTGGGGCGGGTAGCAAGGAAC-TCGCGCTGCCGCCACCGGGGA GATTTGAGTAGGATTAATCACCTACTGCAACA---------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RMER20B ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------TGTTGGGAAACCC---TGCTACTTAAGGTCGNAGTCTACCAT--GT CCGGATAGCTCCTCTGAGCTCNGTGCAAAATG-GAGGACTCCC---TTTNCCAGCAGGG- -CTTCCCCTTCTCTGACCTTGTCTGGGG---------AGCCCGACCCCCACAC-----CC TCTACCTGAGG-AAGGTCACGTAGTCCTTGGCAAACCTACAAGTTCAACTTCCTCTTTCC CNATAAGAACCTGCCCAGCAAGTACCTGGGATTCCTGG----AATGCCTCTCCATGCAAA TGAGGCATTC-NCAGTACTTTAAACT----CCAGCCAATGATTTACATTCACCCTGAAAA CTCCTTCCCAC--------TCTCCAAGGTTCATATATAGCCCTTGTTCACCCCGAATAAA GTGTATGCGCACAAGCTGTTTCACTGAAGATCGTCTAAGAG-AGCTGTTTC-ACTGAG-- -TATCGTCTAAAA-----GAGCTGTAACACTAAAATCCTC-------GGAGAAGCCCTCT CCCCACC---CCAGCACTCACT--------------CCCAGCCGGACCGGGATCCTGCAG ---ACCCCACCCGTTC-CAGACTCCGC-----TTCATCCTTCCAGCCCGG---TGTGCAG CGGCGCCTGGACACCCTGAG--GGAGGAAGCGGAACGCG----GAACCACAGCTGGACCC CAACATGCATACCACA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >IAPLTR4_LTR ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------TGTGAGGAGCCG------------CCCTTGCAATCGCC ATTACAAGATG-GCGCTGATATCCGGTGTTCT---------------------------- -------------AACTGGTAAACAAGTAGTC-TGCGC-------ATGTGCTG-GGGTAT TTTTCC----------ATTCCTTGTGC-CCTGCCTGTCCCGTGGCGT-CATCTGGGCTGA TAGTG-AGCAGCCAGTCAGGGTGAAANACGTC---TCCAACCGCTCTT--GTGGTCTATT TAAGGACC-GAGTTTCCTGTGTTCTGGGCCTCCTCCCCCAGAAGCTG------------- ----------ATGATCTTTCTCTCGAG-----ATGCA------TTA--AAGCTAT----- GCTGCAGAAGAACCCGTGTGTGTCCTGTGTGTGTGTCCTCGCTGG--CGAGACTCCN-TA TCACACAGGGACA----------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR42 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------TGATAGTTTCCTGCTGAAAGACTACACTTCCCAGCTTCCCTTGCGGA- -CTACGGAAGTCATTTCCGCCCCTATAAGGGGCCGCATCCCATCTTCCTCTGTAGGCATT TTGGCCATCCG-CACACGTGGGTGACAAAGATGCCCCCTCGCCGTGAATAAACATGGTCC CGCCTAAGGTCAGACCAAGCCTCTCTTTCTTTCCGCCTTCTGTCTCTCTACAGCTGCTCT TAAATAATCTAACA---------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR16 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------TGTTGTGGATT--GCCCTGGTGCTG-TT TGTATTTTGATGTTAATTCTGCTTTCT--CAAGAGG---GGCTG-----CCTCGAATGA- --------GGAGTGAATCACGTACTCAGGTGAY---TTCTTGTGAACCTT-CTCCCCA-- -TTTTTAACTGGTAA---AAATAAAG------GCTAGAG------CCTGTG-ATTGGGCA GTGGAAG--GG-AAAGGTGGGACTGGAGG-TTTTAGAGAGGGAGANAGGAAGAAGGA--- GAGAGAAGAGAAGAGAGAGGGAGAGGGGA---CAG-----------AGGAAGAGGAGGTG GAA----------------------------GGAAGATGGAGCAGAACCACATGGCCTGG AGAAA------------------------------------------------------- ------------------------------CCRCAAGTAGCAAGGGGTCTC----ATAGC TGGGGAATATAGTAGTGTAGTG--GTAGAT--------------CTGCCCAATCTAGG-- -------CANACAGCTTRT--AATC--ATA--------TTAACTGAGTTGTGTTTTCTTT GCATGGGCTTATTTGGGTTGGAGATTA------AC-TGCAACA----------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >MMERVK10D3_LTR ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------TGTGAGGAGCGGGTGTGGCCGCGGCCCCAAGATGGCGCCCGGGACTGCT- -GCCAAGTCTTATGACTGGCACCTGACTTCCTCATATCC-------CTCAAGATA-GCCA CGTACCTTGAG-CT-GCATTGCGCAGATGCACCACGACGTAAGAT---------CGGATG -ATGTGACGAA--TGTAGTCCTGAG----CCAA--TGAACT--GTGCCTACGTGG--ACT GGGGTG----------------------AGGGGGA-----GTGGACTGGAGGGGATAAAG GGGGA--------------------TGGCCGAGAGAGGTCGGGGC------ATTC----- -------------------------------------------------------TTCTT TTTCCTGCACATTTGT---GAA-----------------------GTTCCTGAATAAAC- TGCCTTGAGAAGGACGTCGGTTTCGTCGCTTCTTTTCTGCTGG---TCGG--AGACGGTA GCGACA------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR19C_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------TGTTGAGGCCTGCTCCTTTTA ACATAACTGTA-GCCATTTTGTATTCAGTCT---CCATTTTGCTCATAAGGTGAAATTAA GTTCAGGTTCTCAGACTCTACTTCCCAGAA----GTAATTA---TCCATAGCTGACACTG AAGAATGCTA-CTAATAAGCCAAAAAGTTATGGTTGA-----ATCACTTGTACTCTGTTA TCTCAATGTTCTGAAATTCCCCTGTTCACC-ACCTGTCCACCA-CCCT-TCTTACCTCAC TCAGGACCAATCAGCTTAAAGGTTAGCTGATAATACTTTGTCTAGTTAGCCAAAA-ATGT TGTACCACTTCACTGCTTGCCTTTTAAACTTTTGAA---CCTG--GTTTTTCCTATAAAA AGCCTGC-----CCTGAGGACAGACTGGTGCCA--CAATTAGGTTTT-----TCCTTCTT GTGGTCCTGAAC------GTTCAG--TATTATGGTGTGTGTTCAATAAACTATTCTTGCT TAACTGAG-----ATTGGTGTTTGTATG-----GTTTGTGTGGCAATTCCC-AAACCC-C AACA-------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR17_MM TGTCAGGAGCCATAATGGGACAAGCTAATAACTAGCAGGTGATCATCCTGAAGTGGCCTG CCTCGGATTATTATATAATCTGYGACAGGTGAGCCCTCATTAAGCAAGGCTGTGAGGGAC TCATTTTAGGAAAGATTCCTGCTATTAATATGCTTTTCCTGTTATTATTAAACATATATA ACAATCACTAAGTAGTAGCACACCCCTTTGGAGCAGATCTCTGCAGATCCACGAAGATGT ACTATCTTGTAGTGATGCTATATAGACAAATAGATGACTTAAGTCTTAATGATGATCCTA TAAGAATTCCTAAAATTATATCTGTGATTATTAAGCTCTTTTATAATGGGACTGCTATTA GGTCCTTTTCTGATAGTCAAAGCTGCGATGAGAACTCTGCCAGTCTCCCAAGTGTCACCA GTTAATTGCTCTTAGATGGTAACCAGACTTTCTCCTACTCAGAGCACATTCCAAGAGGTT GTAAAACAATTAACCAAAGGTCATAAAAAGGGAACTAACGATTTATTATAGGTGCTAGGA CAGAAGATAAAATATCGACTGGGTTTATCTATACAAAACTTCACTTATAACTTAGTTATG GTTTTAAACCTTCGGTGAACCTGTGGAGCTGAGACAGGTGATGGATGTTTAGCTAGATAA TTACTCCTAATGGATATGCATGTAAACATTCTCTGTTGTAAACTTCTATTTCAATTTATG ATTTGATTTTCTGTGTGAACTTTTGATGAACTTTTTAACATGTGATCATGTATTCTGAAT GATGTTTAAGGGCTGAGGACAAAGAGAAGAGTCAGAACTGAGGGACTGGGGTGAGAGGAA YGGAGGTGAGA-AGAACTGAGCTGAGGGAACTGAGCTGAGAGAGGAACTGAGCTGAGGAG AAGTTTTTAGACAGAACACTTTTTAGATTAGAAGGAGAATGCAGAGTGGAGTAACTTAGA AATTATAGGTAACATAAAATACTAAGAGAGCAATGTGCAGAATGCAGAGGGAAAGAGGAA AAAAGAAGATGTCGCAGAGAGCAGAAGGAGCAGGCAGGCTTCTCCTTACCATGGGACAGA ACAGGTCCCATGGTAAGGACAAGGCAGGTTTAGTCTTATTAAAAGAAACAAAGCTTTTTT TCTTACAAACATGGGTTTAATTCATTTAGCATTAAAAAGGTAGAAGCCTTTTCTTTCTCT ATGTAATAAAGATTGGAGCGCATTTTTCATCCAGAATGAGTGAGTTCTTTCTGCACCGGT GCTTGGTCTTTTGCTCCATATGCATATGTAAGTATGGATGTGTGTGTAAGTATGTAATTG TGAGAATGTATRCGTGTGTGTGTGTGTGTGTGTAAGTATGTAATTGTGAGAATGTATGCR TGTGTGTGTGTGTGTGTGTGTGTGTAAGTATGTAATTGTGAGAATGCATGCAAGCTGGGC CCAACTGGGTTTGAATGAAAATGAATAAATGAGCATGAATGAAGCTGAATATGAATTTAT GTGAGATTATGCATATTCGCTTATGTAAAAGTTTTTCCTTCTGCGAGTGTTATTCTCTTC TCCTGGTTCAATAGAAGTTTATTGCTCCAAACTTCCCCCTAGCCCGACAAGCAAGAGGCA TCTGGACAATAGGGAAAAGGCTCTAGCAATTAATCCTTTACTTAATCTCCTGCTGTTTTA GGATGAGGTGCTAAGTGCCAGAGACTGCAGTTTCTGGCCTCAGAGGATCACAGAAGGCAG GTCAGCTACAATAGCATAGTAACTTAGACTTAGATAAGTAAACTTTTTATTATACAGCAA CCCTAAATTTCTCGTAAGACAAAGTCTTACCCCAGAAACTCTTAAGACAAAGTCTTACCC TCCGCCTACGCTCTTCCCCCCTCCGCTGCCTCAAGAAGAACCGACAAGAAAGAAGAAACA CCCCACGCCGGGGCTGGCCCCCCGGCACACA------------------ >RLTR26_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------------TGTGGGACGGT GGGCTATGATAGGCAGCCTGGTCCCTGGTTGAGCTAAGGCTTAAAACCCCGGTGACCCT- -GCAGGGGACTCGCCTGCAAGGGACGGTAGGCATTTTGCCATGCTCCTGGGCACCTGGCT CCTGTCACATA-GCTACAGCCCCCCACACCCCCACCCCCGTAGAGAGGTTTGTGGCCATC AGTCACGTAGGAGCAGCACTCCAAGCCCTCCCACATGTAGATAAGGTATCCCCAAGCTCT CAGACCA---------------AGCCAATAGGAAGTACCTGCTGTCAGACCCTGACCCAC CCCAAAACTGTATATAAGGATCCTCCTATCCAGAAGGAATAAAGGTGTGTGAGAATTACT CCATCATCTGAGAGCTTCTGTCATAAGAGCTGTAACACCACCGCTAGGGAAGAGATCTGC TCTCCCCCCCCCCAAGAAAACGCCACCAGAAGCTCCCCTGCACTCCTCACTGGCTAGTTA GCCTCCTTCCGGCTCAGCCTCGCCCGACTCAGTGCAGAGCGACCTAGGTGCAGCATCTTG GAGCAACTGCAACCAAAGAAACAGCAGCAG--TGGAGACTGAGGTGGAGGCAGCTGCAGC AGCAGAGGCAGTGGAGGCAATTCCCCCTCCCTGCTCAAGTTCTCTCCCCTTTCCCTGAAC CCTCGCACCTGGCCTGGCCAGAGATCTCCGTGGAAAGCCTCCAGTACACAGGCCCACA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR44B_LTR ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------TGCGGGAAGCGGGTGCGGCCG CATGGGCCTAGATGGCGCCCTGGCCCATTGCCAGGCCCCGTGAACCCCACNTGTTTACT- -GCCTTGCCCGAGCATGCGCAG-TGAGG-CTGCATGCGT-------GGGCTGCCT-GCCA GGCTGGACTGT-TCCTCGTGATCCGGACCTGTCAGCCTATCGGTGACCGACCTGAGCTCG TGCCTGGAGCGTGTGTGANTTCTGATTGGATGAGGTGGGGT--GGAGCGAGATG--AGGT CAGTCG----------------------GCGCGAGTATAGGAGG---GTTGTTGTTGTAG CCCTTGCCCTAAGTGGAAG----------------AGGTTGT------------------ --------------------------------------------------------AAGT AAAGCTGCAAGAAGGAGNGG-----------------AAGAAGAAGCTGCTGGGGAAGAG AGCTGTAGGAGAAAAAGCC-ACAAGTAAAGAAGCTGCTGCGTGAACCCGCCTTGGTGTCC GTGTCGTTCTTGTCTCCGCCGGAGCGGAGA-----CTGCGGCA----------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR26B_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------------TGTGGGGCAGTGGACCGTGCCA CCAGACAG------AAAACTTGGTAAGGTCGA-GCGGATTCAG---AAACCCCGGTAAT- -TCTCATAACTGAGAACGGTAG-GCGTT-------TAAATCTACTCCCGACCAGGT--TC -----CTGTCC-TGGAACACGTGA-CCACGAC-ACCCCATGGAGAGGA-----------C TGTGA-CAATCAGTCACGTAGGGGC----AACACCCGA----AGCCCCTCCACATGCAGA TGAGGCATCC-CTAACATCTCAGACC-----AAGCCAATAGAAAGCATCTGCTTTTAG-A TCCCAACCCACCCCAACCCACCCCAAAATGTATATA-AGACCCTATCCACAAGGAATAAA GCGCACGAGA----GTTATTTCACCAAAGACCGTCTGAGAGTGTCTGTCTT-ATAGAG-- -CTGTAACACTTC-----GGGGAAGAGAATTCT--CTCCC-------GAAGCTTTCGTWG CTGGAAGCTGCTCGAGCCTACCGCAGTCACTTCCTGCTCTGGTGGCCCCGACCTTGGCTC CTAGCCGCCCGTCACCACCACCCCTGC-----TCCCACCTCGRGCCCTACTAACTTGGTA TAGCATCCTGCCCTGCTGTGCCCACCAACTCCGGAGCAG----CGGCAGCTGTGGAAGAG GCCCG-GCAGCCCGCCT------TGCTCCGGCTCCCCCTCCCCTTCAGAGAGCTGCAACT CTTTGGCCRCTCCGGCCGGGACCAGAGCCCCGCAGATCCC-----CGCAGATAGCGYCCG GTACAC-AGACCGGCA-------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RMER20A ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------TGTGGGAAAACTCGACTGCTAATTAAGGTCGAAGTCCACCATTGAC CAGGATAGCCTTCTGGGGCTCGGTGCAATATG-GGAGACTCCC---TTCATTAGCAGGG- -CTTCTCCTTCTCTGACCTTGTCTGGGGGAATTCATAAGCCCCCCCCACACTCATATGCC TCTACCTGAGG-AATGTCACGTAG-CCTCAATTAGATTATAGGATCAATTTCCTTTCTCC TGATAAGAACCTGTTCAGCCAGCACCTGAGATTCCTGA----AATGCTTCCCCATGCTAA TGAGGCATTC-CAGGTACCCTAAAGCCCAACCAGCCAATGACCTTTGCCCATCCTGGATG TTCCTACCCTCAGT-----CCCCCAAAAACTTTATA-AGCCTTGAATCACCCTAAGTAAA GTTGATCTGC--------CTCCTGATAAGCTGGTCCCGGTGTGGTTCATTC-ACTGTA-- -CGT-ATCTCACA-----GGGCT----TGCCCAAACCCCC-------AAA-----CCCCT CCCTGTT---C--GGAATCA-T--------------CTCTGCTCCCCACTGCCCTTGTGG ---ACTGTATTTGGCCGCATGATCCAC-----GAGAGCAGGGAGACCCAC---A------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR18_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------TGTTGGGGATT-GGTTCTAATGCT---- -------TTGATTTAATCC---AGCTC--CCAAAATC--------------AGGAATCT- -----------GCATGTCC-------AAATGCTGAAGGTCCTTGTCCCC----AGTTG-- -GTTT----TTGATTGATCAATAAAGATTTGCCA-ACGG------CCAATG-GCTGGGCA GGG-AGAC-AG-AGG-CGGGACTTTTAGATTTGCGCGGGCTAGGACACAGGGG---GAAA GGAAGA--GGGAG---AATCACCATGACTCAGAGG-----------GAGACGGA-----T CAGATT---------------------TAAGGAGCTGCAGGAGAGAAA---TCATCCAAA ATGTAGGTGGAAAGGAAAGCGGCCCC---ATGGGAGGGCTGCCCAGAAGGGTCTTGGGCA G---------------------CAAAGATCAGGGGGCTGCCCAGAAGGTA-----C-AGG GCAGCAAAGATAAAATATAGATTT-AGAA---------------GGTGTTAAGTCAGGAA TACCGG-AGGGAAGTGTGT--GCTA--GCCGCGGGGAGGTTTAGAAGT-GCCCAGCCATT GAGCTAGTCAAGGCA--------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR13D6 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------TGCTACGTCCACTCCAGTGAAGTC-TGCTTGATAGGCCT-AAAGGCCTGAAAG CAG--TCACGAGGCA-AAGAGTTTCAAGGAAACTATGCCTCCTGGAA---CCTTGGCAT- -TCCC---------ATAGCC-CATA--TACTCAAACCC--TGTCCCCGCGTTAGTCTGGT GTATGGATCCA-TGTGCTCTCTTT-CAGTATTGTTTT-ATTA--TAAGTGCCTTTAAGGA TTGATTTTTTTTGACATAT--AGCTAAGCC----------------TCCACCAGTGTTCC AATGGTT-------CCTAGAAAATCCTTGAAGCCAACGGTGAGCTTGGAATTCAGTAAGA ATGTTACCTATTCAGTAACATTCAAATTCACTTCTAGT--------AGAGACAGTGAAAA TAATCAGGCAT--TACAA------AGAACAGAGCTAGAAAAGCTCAGGGCTAGTCTG--C ATAGTAATTACTTAGGACAATAGCCGAGTCACACCCA---AACACAGGAATACACAATG- GCCTAGCAAATAGGTGGGT-------TGTCACATGAAAGAG-----------------TT -AG------TGGAAGG--GAATTCCCCTG----GTACAGGTTTCTTCACTA-GGCCCAGA GGA----------------------ATAGCATTAATCA--------------GGTATT-T ACTAAAG--------------------AACCCCTGGTGGTGGGTT-TAACAATA------ -------------------------------------------------------GACTA GCATTGCATCAGAGCATTCAC----------------------------CTGGC------ -------TCCATTTTAAGTG-GTAA---ACGTG------GCCT-G-------------GT CCCCGCCA-TCTTTTGATGTATGCATTCC-TTTTTGTTTT-------------------- -------GTGTCA-CTGTAACTTGG------CGGATGTGTTCGCCTGGCTTTTCTTGTTT TTCTTCTGTATA-----AAAAAGTCTGGTGTTCGTTTGGAC--AAAT-ACATTCAGATCC -AACACAC---TCTCTTGTGTCTGTGTCTGT--TTGTCACCCCCATTC--TCGCCGACTC CTATGCCCACCTGCA---ACCAGAA--ACCCTGATTCCCACG-GATTTAGGGGGGGC--C AACTGAGCCT-AGTCTGTGGCA--------------------------- >RLTR13D1 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------TGCTACATCCACTCCAGTAGTGACTCGCATTACAGGTTT-AGAAACCTGGAAG CAG--TCCTGAGGCA-AAGAGTTTCAAGGAAACTTAGCCTCCTGGAA---CCTTGGCAT- -TCCC---------ATAGCTA-GAA--TGCCCCAGATT--TGTCCCTGCAATATT---GT GGAGGGTCTTG-CATGCTTTCTTA-CAGTATT-------TTAC-TGGAT------AAGAG TTA---------GAAATCT----------------------------------------- ---------------CAGGGCAAGCTTAG----CAAAAGTATAC---------------- ------------------------------------------------------------ ------------------------------------------------------------ ----------------TTAGAATCTTCATTACAGCCA---GGTATAGCAGACTACATTGC ATATTAGAAGCAAGTTGGTGAATTCTTCTGACAAATGGAGATTCCC---TACAGATAACT TAAAA-----GAACAGCCAAGTTACACTC----ATATGCAAGAATTTACCAAGGCCTAGG AAATAGG--GGGTGGT-------TGTGGTATTGCATTA--------TTCATGAGAAGGTC TGCTAGAGCAGAACC-CCCC-TGGTGGCTAGCTTTCACAAGGCTCAAAGGAGTAGCACA- -------------------------------------------------------AATTG TGACTAGGGTGTGAAATCCTT-----------------------ACCTGTCATT------ -----AGCTGACCCTAGGCA-GGGC---TGTTTTATCTTTACT-GTAAACATTACCTGGT TCCTGTAAGTCCTTT--TGAAGTCATTCC-TCTGTTTTGTGTCAG--------------- ----ATAACTTCA-ATGTACTTTGC------CTGCTGTGA-CATCCTACCCCTT-TGTTT T----CTGTATT----ATATAAGACTGGTGTTCACTTTGTGAAACATTACATTCAGATTC -AGCACAC---TCTCTCGTGTCTGTGTCTGTGTCTGTCACCCCATTC---TCACCGACTC CATTGCCCACCTGTA---ACCGAAA--CCCTGA--TTTCCCACGGATTGAGGGGGGC--C GACTGGGGCCCGGTCCGTGGCA--------------------------- >RLTR23_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------TGTAGGGGGT--GGTTCTGATGCT---- -------TTGA---------------T--CGGGAAT---------------------CT- -----------GCATGT---------AAACACTGAAGGTCCTGGTCCCC----AATTG-- -GTTC----TTGATCGATCAATAAAGA--TGCCA-GTGG------CCAATGAGCTGGGCG AA-------AG-AGG-TGGGACTTCCAGATTTCCACAGGCAGGCTAGGAGACA---CAGG AGGAGGAAAGAGA---ATTTGCCATGCTTTGGAGG-----------GAGAAAGAGCC-AC CAGCCA---------------------TGTGAGATCTCAGGTGGAGTG---GCCATTGGC CACTTCCCCGACTGGGCCTGGGGTAG---CAGGCGGGAGATTAGAAACATAACTAAGCTG A---------------------GGGCAGATTTAGGGATGTTGAGCCAGGAC----TGAAG GTAACTGGGCAACTAAGCTGAGGGCAGAT----------------GTGTTGAGCTAGGAG T---GA-AGGGAAGGGTAT--GCTA--GCCG-AGGAAGGCTTAGAAGT-GCCCAGCCATT GAGCTAGT--AAGGATATTAAAA----------ATAAGCTAATGTGTGTGTGTGTGTGTG TGTGTGTGTGTGTGTGTGT--------GTGTGTGTGTGT-GTGTCTTTCATCCACGGATC CAAGG-------------GAACCTGGGTGGGGGCTGGTAGCGTGGTC---TGCCTGGAGC TTAAAGTGGGGTAGCAAAAACTACACGCTACA---------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RMER19A_LTR ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----TGAAGTGGAA----ACTTCTAGTTTCTTTGGAAAGTTAGTTATGTCAAATGATGT TTTGCTGGG-GCACACAGGTGAAAGG-ATGTCTTGCTAAAGCAAAC-ACGTGAAAGANT- -GTTTTC--CTGAAGCAGACACAGGTGAAAG-----GATG-----TTTG--------GAT ATAGCAGACAC-GTGAAAGGACNCNTGATG-----AAGGAGTATAAATATGACCCCACAG ACAGTGGGAGACGAGCACTGAGCATTGGTTTGGTTTGCTCC--GCCTCGCTATTCTTCGC TAACGACACG-CATGTATTGGTTCGCCTTACATAGCGTTGTTGAGCTCAACTTGTGGTAA CGCCGCCATTGAGAGAAACTCGCCCA-------AGAACTGCTCGTGAGGTTCCTGCGGCA GCT-TGCTGCTTCTGCGGCCTCGCCTCAGGCCGGTTGG--CG-AGCCTGGCGGTTTCTTC AGGATTGAACTACAGCTGCCGGTTTGCCTGGTGTCTGCCTGCTGAAAGGACTGGACTGTA GCTGCTGGTTCGTGCCTG---GTGTCTGCCTGCCTAGAGGACTGGTCTGCAGCTGCTGAG TCGTATTTGGTGTTTGCTACGGGACTGAACTGCTGCCAAAGAAGATCAAGCTCGCCCCCA AAGAACTATTGCTGAACAGGTCCACTTCCCCCATATCCTAATAACTTTTCTCTTCCACTA CCTC-TGCTGGGTGGTGGGCTAGAGGAGAGGTTGAACCCTTA-------TTAAA----AG TAGGTTGCAAAAAAT---TTATGCCTACA------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR20B4_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------TGTAGCGGCTTGTGTTCTCATGCT---- -----AATTATGTTA---------CCC--AAAAACCTG----------TTTGCAGTGTC- ---------CCGCACATAG--------GAC-TAAAGGAAGCCTGTCCCC----AGTTG-- -GTTTTTGACTGGTCAATAAATAAAGT--TACCG-GCGG------CCAATG-GCTGGGCA GGG-AGAC-AG-AGG-CGGGACTTTTAGGATTCC-CTGGGAAG-GGACTAGGGACCGAGG AAGGAGGAAGAGGGGATTCCRCCATGAC--GAGGG-----------CGTAGGAGACGGAC CACGCC---------------------GGAAAGG-TGCAGGAGGGAGA-G-ACAGCCGAC ATGTAG--GTGCAGGGG----------------GAAAGCGGCCCCAGGAGGGCTGCCC-- -------------------------------------------AGCAGGGT----CCAGG GCAGCAAAGATAAAATATAGATTT-AGTA---------------AGTATTAACTCAGGAA TATCGG-AGGGGAGTGTGT--GTTA--GCCACGTGGA-GTTAGGGAGTGGCCCAGCCATT GAGCTGTTTAAGGCAT-TTA-AAAT--------ATAAGGC-------------------- --------TGTGTATGTGT-----------------------GTCTTTCATTCGTGAATC CAGAAC----------ATTGGGGCGGGTAGCGAGAAGC-GCGCA---CACCCGCCGGGAA GTATAGAGC-AGATTAATATATTACCGCTTCA---------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR10B2 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------TGTGGGAAGC------------------CACATGTGCC GTTGCAGGGTG-GCGCTGGCTACCGCTGGCCACCACGCATACATAGGCAGTAAAGTTTTT TTGCCAAGATGAGGTTTTGAGAATTAACCAAAATTAACCA--ATCAGATGAGAGACAAGT TAACCAATCA-GATGAGAGACAAGTTAACCAATCAGATGTGAGGCATGCAAATGAGGTGG TAAGCATA-ACCCATGCATAACCAATCC---------GGGTGTGAGACACGCCTCTCCTA GGCCTATATAAGCAGCACCAGTTCTGGGGCTTGGGGGTCTCTTCG--------------- ---------------------CCTCTGCAATCAAGCT------CTCCCAATAAACG---- TGTGCAGAAGGATCCTGTTGC--A--GCTGTCGT--TCTTGCTGGCGAGTCAGGGCG-CG CGCAAGA----------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR43C ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------TGCCGGGAG CC---ATGGCC-T------CAGCCATGGCCTTGTGGATATTTTC---------------- ---TAGCTTACATAAACA----------------ATCC----TGAGAGAAC-----ATTC GT----------------GGTCATAACAGTAAGAATGTTTGTG------GGTAAAGAGGA CACTGTGACCGTTGGTT----CCAGGAGCTGAAG----ATTGCCACCTGAC--------- -----------CTTCAGAGA-GCCCCYGGG--CTCTTCCCCCCTCCCTTGGAGCCT--CC TCTTG--CTTATGCTTATA---T-TGCCACTCCTG-------AATA--AAGTTTTTCAGA GCTTGATCAGT-ATG-ATTGACTTGCTCTCATTC----TTCGTGTCTCTTGTCCCTCCCA CTC----TCTCACTCCCTTTCTTCTCTCTC---CTGCCCTGGGTCCCCGCTGATTA-TCC CTGCAGGTCGGG--GCA------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR44D_LTR ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------TGCGGGAAGCGGGTGCGGCCGCAGGCCCCGTGAAACCCACTTGTTTACT- -GCCTTGCCCGAGCATGCGCAG-TGAGG-CTGCATGCGT-------GGGCTGCCT-GCCA GGCTGGACTGT-TCCTCGTGATCCGGACCTGTCAGCCTATCTGTGAACGACCTGAGCTCG TGCCTGGAGCGTGTGTGAATTCTGATTGGATGAGGTGGGGT--GGAGCTAGAAGG-AGGT GAGTCG----------------------GCGCGAGTAGT-AGGA--GAGTTTT-TT-TAG CCCTTGCCGTGAGTAGAAGTAG----TAGTAAGAGAAGCTGTTGTAATAGGAGTTGTTTT A------------------------GCCCTTGCCCTAAGTAGAAGCGAGTAGTAGTAGAA GAAGCTGTTTTAGGAGAAGGAGT--AG----------AAGAAGAGGCTGCTGGGGAAAAG AGCTGTAGGGGAAAAAGCC-TGAAGTAAAGAAGCTGCTGCGTGAACCCGNCTTGGTGTCC GTGTCGTTCCTGTCTCCGC-GGGCTCGAAG--GACCTGCAGCA----------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR34B_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------------------------------------TGTAAGG- -----------GGAGGTTC-------TGATACT-AAGGTCTAGTTCCCT----AATTG-- -GTTC----TTGATTTGTCAATAAAGAA-GGCCAGGGGCTGGGAGCCAATT-GCTGGGCG GA--AGGT-AC-AGG-TGGGACTTCCGGGTCCCAGGAGGAAAAGGCAGACGCA---GGGA ARGAGAGAGGGGCTTTTTTGGCCATGCTTTGGAGG-----------AAGAAGACACGCAG CAATCA---------------------TGTAAGGTCTCGGGGCAGCTA---GGGCCTGCG GCCT-CTGCTACGGGCG-------------------GGTGGCCAAGGATG---------- -----------------------------TTTGGCAGGGGCTAGTTGGAAC----A---A GCCACTAA-GTTTAGGGCGGA----AGGA---------------GAGACGGAGATAATAA ----AT-TGGTAAGGGCAC--GCAT--TTCCAGGCAGGAGATATCTGC-GCCCAGCAATT GTGCCATAGAAGGCAAGTTGTAAAGTA------ACAAGCTGAGTGTGTGTGTGTCTTTTA TCCTCGGATTCAAGGGTCTCAG-----GAGTGGGCTGGTAGAGCAGTCGACTCCTGGAGC AAAGGCGGGTAGGAAAGAGAAGCCGGGTTAGGGCTGGCGGCAG---C-CGATCCCGGAGC TAAGCCGGGTGGAACAAAAGGGAGCCGGGAGGGGCCTGGTAGCGCAGTCAGCTCCCGGGC AAAGGCAGTAGTGTGATTTTAAAACTACACGCAACA------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RMER13B ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------TGTGGGACCGTGAAAGGCAGCCTGGTTCCTGGTTGAGCTAAGGCTNGAAA CC---CCG------GNGACCCTGAAGGGACGGTAGGCGTTTCGCCTGACTCCCAGGGAA- -CCAGGCCCCTGTCACTAGCCCGCAGCC---------CTCCATAGATTTGTGGC----CA TCAGTCACGTA-AGGGCAACGCC--CCAAGCC-CCTCCACAGGTAGAG-----------G ACGTGACCNCAGGTCACGTAGGCTC----AAGAC--------AGA---TCTCCATTNTAA TGAGGTACCT-AAA--GGCCTGGAGGGC--TTAGCCAATAAGCTTT--CCTTCCCAGACA CTCCTCCCTGC-------------AAAAGGTATTTA-ATCTCAGGCCCACCCTGAGAAGT G-GGGTACGGTTTTACTCATCCACTTTCCGCCATGACAATAAATGCCTTAAAACCATG-- -GACTGCCTCTTTTCATCGGGATCCGCCGTGGGGAGCCAT------GGAGAAGGCCTTCG CC-TACAGAGCCGCCGTCTAA-TCTCCCGTAGAAGGCCT-CTCTGC----GCTCCCAGCC ACGGCCGCCACCAAGCCAAGCCACCGCCGCCGTCAAGCCAAGGACTCTCCCCGCGGGACC AGCCGGAGCTCCCTCCCTTTCCCCCTCGGCCCCGGGCTAGATCCAGCCCGCGGGCCCCCA CTCCGTTCTCAGCTCTTCCGCGGCATCCCAGCGGCGCCTGGGTGCCCAAGAGCCTGAGAA CCAGACGGCCC-CGGCCTCCTTGCAGGCCCGGGGACCCCCGAGCCAGCTC---CGGCTGT CCCCGCGCCTCAGACTGCGCTTCCCCACCCCCGGAGCGGTGTCCCGNGGCTTCCCTACAG CCCGACACCCGCCCGGCGACGGCGTGGGGTAAGCGCGGTCAAACTTCCCGCGTCCTGCCT CCCCGAGCGGCCGAGCCCTGTGGCGGAGCGGACGCGGGACCCCATAACCCTACA------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RMER12 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------TGNCAGAAGCCATCTAGG AAAGGCTATGGCAAGCAAGTGAGTTTCCTGGAGATGGCCCACCATTTTGCATGGCTGCGA TGGGTGCGCTCTGAGGAGGCAAGGCCCCAAGAGACTTCATCCCAGGATTGCTTCTCGCTG CTGATATGCCTTTCC-----TGCCACTATTACAT-------------------------- ----------------------------AGCCTAATGA------TTCCTGGGCATCAGCC CACCCTATTGGGCAAATTTCCTGCAGATCAACATGAAGATGAACTTTCATGAATTAATGC TGTTTAGATGAATTAATGACTTTATAGAATTCCTGATTTGATTCAAATAATTTTAGGAA- -G----------------AAAGTTTAAGGAGATGGTTTTAGTTGTTTTGCCAGAAAGATG TAATAAAGTTA-GA-ATCAAGAATAGAATGTGCCCNCTCCTCATAGAATAGTAAGTAAAG GCTGCAT--AATAAGGAATACAATGAGCTTTCATA--------------AATTGCACTAA GAAGAGAAA--TAGGCTTGGGACAAATTTGTGATCAAGGAAAAACATTCATTCTAGGTCA GGTCCAAGGATGAAGCCACAGGTGTGCACT-ATGATAAAGCAAGGCCATGTGAAACTGTT GCTTTGAACTTATAATGAGCTTATAGAATGAAACACTGCTTTGAACTTACTA-TCGACAT CCTTCTGTAACTCCCCTT--TTGTGTAACATTTTATCTATGAG--GTAATTTTCTAAAGA ACTTTTTGTCTAAGAAGGTATAAAAAG--GCCAGAGAAA-AGAAATAAAGTGTGGCTGTT GGGGCTTCTGCTCCATCCACCAAATGTATATGTGTGTNTGTCTGTATGTATGTATATACG TGCGTATGTAGGTATATGTGTATGTATGTA--AGTATGCATGNACACTTGTGGAATTGAT GAAACAGGTGGTCGGGCCCGGCCAGAGTGTGAATGTGTTAATGTGCGAATGAGAATGTGA GTGAAAATGTAAATGTATGTATGTGTGTGTATGTTTCTGCTCCATCCACCGTGTGTGTGT GCATCTTGATTCTTCTTCTTTCCTTTCTCTCTGGCTCACAAAGAGTTAACGAGCTCCTGG CCAGCGAGAGGCCCCTGGCTGCTCGCCAGAGAAAAGAGCCCNAGCAATAAATCCTTTTNC TTAATCCCCTGCTGCTATACA-GCAGGAGTTAAT-TGCCAGAAAGCCANCGGCTTTTGGC CNCAGAATAAGCAAGAGAGAGTTAAGATTGCCAGAAGCCATCAGCTTCTGGCCCCAGAAC AGTAAGAGAGAGTTACAAGGCCAGAGGTCATC--AGTCTTTTGGCCTTCATCCAATGCTG TGTCCCACCTCAGCCCGTCCCAGGCCG----GGCAGGCCCCCGGCA-------------- ------------------------------------------------------------ ------------------------------------------------- >ERVB4_1B_LTR_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -TGTCAGAGACCATCCCGTGAGAAAGTGAGCCCTTCACAATCTCCCTAGCAGGCCAAATG GCCTTGTACTG-AGAGCTGGTTGTCACCCCCCTTTCCTCCCTATTCCTTTCCTGGCACCT GAGGCTGTAAAAGCTGAATTATAGTCCCCTCTTCCCTA------TCTCTTCCTGAGTTCC CATGCCATCC-----------------AAGGACATGAGTTACGCCTGAGCCCAGCCTGAC CCCCAAGGCTGTCAAGGAGGATCGATGTTCCAGAGATAAGATCCAGAGTGCCCGCTGCCT GGCGCCTGACTTCGGCCCCCATGTCAGCAGATGCCCACTTCTTTGTTCTTTGTATAATTC TCCCTCGACCCCTCCCATATTCCCCGCGATGTATGCTTTAAAAAGAAGGCACCTCAGCCT AATAAACGAGACCTTGATAGGTTCAATCTACTTGGTCCTCCGACTCTTCTTTCTTTTACT CCCATTTCCTTCCAGGTTTGCGGTCCCCCTCGCACCCACGAATAACTGAATCCCGCGGGA CGGGATA----------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR10A ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------TGTGAGGAGCGGGTGTGGCAGCAGTCCCAAGANGGCGCCAGGGACTGCA- -GCTAAGTCTTATGACTTGCACCTGACTTCCTCATACAC-------CTGAAAATAAGCCA CGACCATCGTG-A--GAGCTGCGCAGGTGCACCATGATGCTGGCGGTTTAAACAAGTCCA TATTTGGTGGA-GACATGCCCCTGCCGCCCTGA--TTGGCT--GAAGCTGCGTGCCTGGT GAGGTG----------------------ACGTGGCCTGCTGTGAGTGGATGGGGGCTGAG AGTATATAAG-AGTGAGAGGCCCGGGGTTCGGGGGAGATAAAGATGAGGGAAAAA----- -------------------------------------------------------GATGA AGAGATGAAGAGAGAGANGAAGAC---------------ATGAAGTTTGCTGAATAAAC- TGCTGTTAGAAGGACTG----GTGGTCGCGTCGTTCTTGCTGG---TCGA--GAGCGGAC GCGACA------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RMER19C ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----TGAAGTGGAA----ATTTCTGGTTTCTTTGGAAACTCAGTTGTGTCACGTGATGT TTTTCTGGAAGCTGTCTTGTGAGAGGGATGTTTTGCTGAAGCAGAC-ACNTGAGAGGAT- -GTTTTG--CTGAAGCAGACACGTGAGAGGGCATGTGATG-----TTTT--------GCT GGAGCAGACGC-TTGAGAGGGCGCGTGATGTTTGGAAAGAGTATAAATGGAACCCCACAG ACAGTGAGAGG------------ATGCTCTTGCATTGCTAC--GCCNTGCAACGCTTCGC TGGT-------------------------------CTTCGCTGGTCTTCACTT------- ------CGTAGAGAGAAACGCGCCAA-------AGAACTTCTCGTGGTATTCCGGCTGAT TCT-TGCCGCTTCCGCTGACTCGT-----GCCAATTCG--CGGAGCCTTGCGGTTTCTGC TGGATCGAGCCGCTGCTAC----------------------------------------- -----TGATTCGTGTTTG---GTGTTTGC-----TATTGGACTGGACTGC---------- -------TGGTATC------------------CTGACAACGAAGANTGGAATCGCCCCCA AAGAACTACTTCTAAACAGGTCCACAACCCCCTTTTCCTATTAACCTTCTTTCTCCCCTA CCTC-TG---GTCGGTGGGCTAGAAGGGAGGTTGAAGCGTTNAAGAACCCTAAATAA-AG TAGGTTTTGAAAAAT---CTAAGCCTACA------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR31B_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----------------------------TGTAGAGAGAATCTCTTGTGT---ACTGT-- -GTGGAAGCATCACCTGTCAATAAAAA----GCTGATGG------CCAATTAGCTGAGGC AGG--ATATAG-AAGGTGGGACATCCGGCAGAGAGAGAGAGA-------GAGAGAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA-GAGAG--AGAGAGAGAGACTAATT CTGGGAAAGA-GT-----------------CAGGCG-------------------CGGGA AGATTTTCCACCCAGACTCTGAGGAA---GTCGGACGTATGAAACTG-----------AG G---------------------AGAGGTAACTAGCCACCATGTGGCAGA-C----ATAGA ATAGAATAAACGGGTTAATATAAGTTACGAGC------TAGTCGGGGAACGAGCCTAAGC TTATG--GCCTAGGCATTT--ATTC--ATAAATAATTAAGTCTCAGAGTCGTTATTC-GG GAACAGGRGCACGGGTG-GAAAA----------GCCCGTGG---TTACA----------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR19B_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------TGTTATGGTCTGACCCCCCCCCCCCAGAATAGCTGTAGCCATTTTGTTCCATGC CTGCCAGCTATTTCATATTGTTGCTG--TAACATGCCTGCCAGTCATTGACACAGAGAAG TGACTTGGCTCAAGGACATGCTGACCACATACCCTGTTTTGTTCTGTATGTTCTGAATG- -TTCTGTATGAGGTTTGCTAATCTTAAGAAATTCCACAAAGCTTTACGTAGGACCCATCA AATCAAAGGTC-AATATGAACTGTTATGTCTAAAATATCTTGAGTCAGAGCTGACCACCA GGCAGCCCTTCCTGCACCTATGTATGAGCTCACTGTGGTT----TTTGTGGCTGACACTG AAGAATGCTA-CTAATAAGCCAAAAAGTTATGATTAT-----AATACTCATGCTCTGTTA TCTCAATGTTCTGAAATTCCCCTGTTCACC-ACCCATCCACCA-CCAC-CCTTACCTTAC TCAGGACCAATCAGCTTAAAGGTTAGCTGATAATACTTTGCCTAGTAAGCCAA------- ----CTGCTCCCCTCCTTGCCCTTTAAACTTTTGAA---CCTG--GTTTTTCCTATAAAA AGCCTAC-----CCTGAGAGCAGACTAGTACCA--CAATTAGGCTTCCGAAGTCCTTTTT GCGGTCCTGGAC------GTCCAG--TATTATGGTGTGCGTTCAATAAACTATTCTTGCT TAACTGAG-----ATCAGTGTTTGTATG-----GTTTGAGTGGCGATTTCCTGAACCC-C AACA-------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR9A ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------TG--TGCCYTCYCCCAGCCTTGA- GC---GGGCTG-AWTCAGACCTTG---TTTWTGCCACAGCCGGCTAGCCCACCT--AGGG T-GGAGTCTTCCGACCTAG--------GTAAA-GTCTA----TTGT-CTGCCACAT-CTG C-AGCTTCCT-SCAAGACGCCACTACCTGCTGAGMGGCTGAGCTTG---TTCTAAGGAGA TCCTGA-------------------------------------CAA-------------- ----------------------GCCACGAGATCCTGGCATA------GTGGGGGATGG-- -GC--TCCCCCCCTTTTAA-GGTTCAGACCCAAAA-------AGTA--AASATTG-GG-- CCTTGATCAGAGAAC-TTTGTCTTGGCTCC--TTA--TTTCTCTCG--CCGCCC-TTCCC -------ATCCAACC-CCAGCTT-TCCT-----TTCAG---GAACCCAGGAASCCAT-GG CCGCTGGC-GGCT-ACA------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RMER13A2 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----------------------------------TGTGTGGGGCAAGTGGACCGTGCCA CCAGACAG------AAGAACTGGTAAGGTTGAAGCAGGCTC-----AAACCCCGGGGAA- -TCTCAGAATTGAGAACGGCAGGCGTGG---------AGCCAGCTCCCTGCCAA----AC TCTACCTGATC-TGGAACATGTAA-CCATGAC-ACCCCACTGAGAGGA-----------C -CATGACAATCGGTCACGTAGCATA----AAAACCTGG----AGT---TCTCCATGCTAA TGAGGTATCT-AGATAGGCCCTGAGTGT--TTAGCCAATGAGCTTC--CCTTCCTGGGCA TTCCTTCCCGC-------------AAAAGGTATTTA-ATCCCTGGTTCACCCTGAGTAA- G-ATGTATGCATTCACAT-CCGCCATCAAATA------AAGCAGTTTGGACAAGCAAG-- -GACCATCTCCTT-CATCAAGGATCTCGGGGTGGGGTGGTTGCAGGGGAGGGGGGCTTCG TCGTAAAGAGCCGC-GCCTAAATCTCCCGGAGAAGGCCTTCTCTCTTCCAGCCCCTCCAT ACTCTCGGCACTCACTCGGA-----------ACCAAACC--GGATTCCGCCCCTGT-CCC GGGCTCAGC-CATCCCCTTCCTGCCTGGTGCGTAGAT--------GCCCTGAGGGAAAAG CCCAGACCATGGACCC-----ACGTTCCCAACGGCGTCTGGGTACACAGGAGACCGGGAA CCACAGCATCC---GTCCCAGACCCCGCTGTTTCTCACCCRGGAAAACACGGACTGAGGA CCCC-TATCATGGACTGTGTTCTGCC-TCCCCTGAGCGGCTTGCCG-------GYGGCGC TCAGGCACCC------CAGCGGCGAGGCAGACACGCAGCCCGGCA--------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR10E ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------TGTGGGAAGC------------------CACATACGCC ATTACAAGATG-GCGCTGGCTACCGCTGGCCACCGCCCGTA------------------- ------------AGTTCGGGTAAACAACCAATGTGCGC---------ATGTGCATAAGGG TTTCC-----------GCGCCAAGTCA--CAGCCCATCCCGGGGAATGTAAATGAGGTAC TGA----------AAGCACAACCAATC----------AGGTAT-AGACACGCCACTCCTA GGCCTATATAAGCAGCGCCAGTTCTGGGGCTCGGGGGTCTTTTCG--------------- ---------------------CCTTCGCTATCAAGCT------CTCCCAATAAACG---- TGTGCAGAAGAATCCTGTTGT--G--GC-GTCTT--CCTTGCTGGCGAGTC-GGGCG-TC CACA-------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR43B ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------TGCCGGGAG CC---AAGCCC-GCTTACACACCCTCTGTCTCAGGAATGTT-TCAGGAATGT-------- --CAAGCCCACTTACAC-----------------CCTC----TGGGACACCTAGCCAGTT GTC--------------CGTTCTTATCACTTTTACAGCTTCTG------TCTCCAGCCGT C--TGTTCTTATCAGTCTATACCTGCAACTTACGGTTTAGGGCTATAGGGA--------- -----------GGGTGGTGACGGTGGTGAAA-TTGGTCCTGGGTCCTGGGTGACCTTCCC GCCTG--CTTGTCTTTATA-AGC-CGCTGTTTTTA-------ATTA--AAGTTTG--AGA GCTTGATCAG--AAC-ATAGACTTGCTCTCCTTC----TTTGCGCCTCCTGTCCC--CCA TTC----TTTCGCCCCCT------------------CC-CAGGTCTCCNCTGAAC--CCC C-GCAGGCCGGG--GCA------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR20A2_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------TGTTGGGGATT-GGTTCTAATGCT---- -------TTGAATTAATCC---GGCCC--CCAAAATC--------------GGGAATCT- -----------GCGTGTCC-------AAACGCTGAAGGTCCTTGTCCCC----AATTG-- -GTTT----TTGATCAATCAATAAAGA---GCCA-ATGG------CCAATG-GCTGGGCA GAT-AGAC-TG-AGGGCAGGACCTTTAGATTTGCGTGGGCTAGGA-ACTGGGA---GAGA GGAAGGAAGGGAG---AATCGCCATGATTCGGAGG-----------GAGACGGA-----T CAGATT---------------------TA--GAGCTGCAGAAGGAAAA---TCATCCGAA ATGTAGGTGAGAAGGAATGCGGCCCC----CGGAAGGGCTGCCCAGAAGCGTCTTGGGCA G---------------------CAAAGACTAGGGAGCCGCCCAGAAGGAGC----C-AGG GCAACAAAGATAAAATATAGAATT-AGAG---------------GGTGTTAAGCCAGGAG TACAGG-AGGGAAATGTGT--GCTA--GCCATGGGGAGGATTAGAACT-GCCCAGCCTTT GAGCTAGTCAAGGCATATTTAAA----------ATTAACTG------------------- -------GTGTGTGTGTGT--------GTGTGTGTTTCA--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR10 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------TGTGGGGAGCGGGTGTGGCGGCAGTCCCAA--AGGCGCCAGGGACTGCA- -GCTAAGTCATATGACTTGCACCTGACTTCCTCATA-----------------TAAGNCA CAAACATCTTG-A--GTGCTGCGCAGGTGTACCAGGATACAGGTG---------AATCCA -ATTTGGTGGA-GATNTGCCCCTGCTGCCCTGA--TTAGCT--GAAGCTGCGTGCCTGGT GAGGTG----------------------GCGTGGCCTGCTGTGCGTGGATGGGAACTGAG AGTATAAAAGGAGTGAGAGGCCCAGGGTTCGGGGGAGATATAAAAACAAGGGAGA----- -------------------------------------------------------TATAA ACAAG-GGAGATATAGAGAAAGA----------------AGAAACAGGACTGAATAAAC- GTGTGCAGAAGGATCCT----GTNGCAGCGTCGTTCTTCCTGG---CCAGTTGAGCGCGC GCGACA------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >BGLII_Mus ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------TGTTGCGGATA--GCCCTGGGGCTA-AT TGTATTT-GATGTTAATTCTGTTCTCC--TGTGAGG---GGCTG-----C---GAACAA- --------GGAATGAGTCA-GCACTCAGGTGAT---TTCCTGTAAACCTT-CTTCCCA-- -CCTT-AATTTATAA---AA-TAAAG------GCTAGAG------CCGGTG-ATTGGGCA GAGAAAGAGGG-GAAGGTGGAGCTGAAGG--TTTTGGGAGAGAA---------------- -----AGAGAGAGAGGAAGGAGGA--------CGA-----------CAGAGGAGGAGGAA GAA----------------------------GGAAAGTGGAGCAGAAGCACCTGGCCTGG AGAAA------------------------------------------------------- ------------------------------CCGCAAGTTCTAAGGGGTCTC----TTATA TGGGGAAGATGGTAGTGTAGTG--GTAGAT--------------CTGCCCAATCTAGG-- -------CGCACAGCATGT--ATTC--ATA--------TTAATTGAGTTGTGTTTTCATT GCCCGGGCTTATTTGGGTTGGAGATTT------AC-CGCAACA----------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >ERVB4_3_LTR_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------TGTTGGGAGCCAAAACTAAATTCTTTATAATAATCCAAG TGAAAAAGATG-ACTACCAAGTCTTAAGACATAAAGYTGGAMCTCCTCCCCAAGCTGACT AARTCCAGACAAAGGTCACCAACGGACTGTTCCCAGTTGGACCTCCTCCCCAAGCTGACT AAGTCAGATGAAGGTCACCAAGGACTGTTTCGAGAATTACCACAAGATGATCCMAGACCC GACTGACGCAAACAGCAGATGTCATAACCACAAGATGTACTTTTAGATATCATANCTCCC CTTGTAGTCACCAAGGAAAATTACCACTGCCCCCTCCCCCGTGCCCTTCTGCGTAAGGGT TATTTCCCCTTTGATCTTTTTGTATAAAAACTACAAG--TTTTGCTGAATACAATGAGAC CTTGACAAGATTCAGATTTGGCTCTGTGTCGTTTCTGTGCTTGGTCYCCGTTTCTCTCTC ACCCCCATTTGGTTTTCAGGATGAGTCCCCTCGAGACCCACGAATAACTGGACC------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR13B3 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------TGCTACGCTCTCTGGTCGAGTC-AACTGGACAAGCCG-AGAGGCTTAAAAG TCA-CTCATGAGGCAAAAGAGTTTCAAG-GAAGCTCTCCTCCTGGAG---TCTAGCGTT- -CCCT---ACCCATACAGTAATTTTTCATTCCCGCGTT-CCATTCCCGCGTTAGTCTAGT GTATGGATCCA-CGTGCTCTCTTTCATATATTTTCCT-ATCA--TAAGTGCCTTTTAAGA TTGAAT---TCTGACATAG----CTAAAGC--------------CGTCCGCCAGTGTTCC AACAGTC--------CTAGTTCGTCCTTAG-----------------CAAGACCTTGGG- -CTTGGA--ATTCAGTACTGCCCC------------------------------------ ----------------------------------TGGTATTACACTATCTCTTTGA---- ----------------GTAAAAGTTAGGTCACTGCCC---TTCACAGGAATTTACCATC- ACTAAGGAAGAAAGAAGTT-------TCTGACCGTAGGAGAAACCAGAATA---GATATT TAGAAT-T----ATAGCTGAGTTACACCTATCTATATACAGGAATTTACAATGGTTTAGG GAAGTAGATTCCGGCTGTGGTTTTAGAGTATTGCATTA--------TTCATGAGATGGTT AGCTAGAACGGAACTCCCTAGTTAGAACCA----TGACTTGGGTGTGAAAGCCCTTGCC- -------------------------------------------------------CTAGG AGTGAAAAGTTCTCACACCTGGCTTC---------------------TAAGACTATA--- ------GCTGACCTTAGAT---AGGGCTGACTCTGTCTCAGT--TATTTTATTGCCCAGT TCCTGCCAGTC--TTTGCGTTTTCATTTCCTCTGTTCTGTGTAAG---AGTCATTAAGCA TCCGGTTACCTCATTTGTACCTTTG------TGGGTATGT-CACCCAAACTACCTTGTTG T-CTTC--TGCA----TAAAAAGTCTGATGTTCGATTTGAA--AAATTACATTCAGATTC ACACACAAACTCTCCCTGTGTGTGTGTCTGT--CTGTCATT---------CATCCA-CGC -TTTGCCCACCCGCG----TCGAGAGACCCCG---TTCCACGCAGACACAGGGACC---- --CAGAA----GGTCTGCGGCA--------------------------- >IAPEY3_LTR ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------TGTGGAGAGC---------CGTGCCGTGAGCAATCGCC ATTATAAGATG-GCGCTGGCTTCCACTGCGCCT--------------------------- -------------AACTAGTAAACAAGCCTTA-TGCGC-------AAGTGC-AAGAGTGA -ATTC-----------ACGCCCAGTCA-CT-GCCCATCTCGGGGCGTAGTAATGGGGTGA TGGGCGAGCAACTAATCAGGTGCTGTCACGCCACATCAGGTGC-TGAAACGTCACGCTGC GGGCTATATAAGCAGCACCATTTTCCGGGTTCGGGGTCTTCCTT---------------- --------------------------ATGTTGAAGCA------ATA--AAAGCTTT---- GCCGTAGAAGGATCCGGTTGT--CC-GAGTGAAT--TCTTGCCGGCGAG-ATACTAG-CT CGGGCAAGA--------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >RLTR44A_LTR ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------TGCGGGAAGCGGGTGCGGCCG CATGGGCCTAGATGGCGCCCTGGCCCATTGCCAGGCCCCGTGAACCCCACATGTTTACT- -GCCTTGCCCGAGCATGCGCAG-TGAGGACTGCATGCGT-------GGGCTGCCT-GCCA GGCTGGACTGT-TCCTCGTGATCCGGACCTGTCAGCCTATCGGTGACCGACCTGAGCTCG TGCCTGGAGCGTGTGTGANTTCTGATTGGATGAGGTGGGGT--GGAGCGAGATG--AGGT CAGTCG----------------------GCGTGAGTATAGGAGG---GTTGTTGTTGTTG CCCTTGCCCTAAGTGGAGA----------------GAGCTGT------------------ --------------------------------------------------------AAGA AAA----------------------------------------AAGCTGC-----AAGA- ------AGGAGTAAAAG----------AAGAAGCTGTTGCGTGAACCCGACTTGGTGTCC GTGTCGTTCTTGTCTCTGC-GGGTCGGAGA-----CTGCGGCA----------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >MLTR32C_MM ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------------------TGTAGAGAGCACAAGG G-CCTTGTGCTCACAGATAAGCACTAGGGAAACCAGGAATGTTAAACACACAGGGTTGT- -CTCCTCAAAGGAGGAGATAAAATTAAATACC-TGTT---TTCCACCCAGAAGGCTGAGA GT-GGATGTTG-TTA-ATAACCTGGTGACCTTTTTGCTATCT--GTAGAGACAGACCTCA CCCAAATCCCCCAGAAT------------------GAT----TATCCCAGACTCTTCCCT C------------ACTAGACCATT-----------------ACCCATCCTTAGGGGAGAT GTCACATGTACTTTATG---GCCTGC--TGACCTCTATGCTGTC----GGTCAG------ ----AGACC-----ACACTAGATCC------------TTCCCTAGGCCTTTTAGCT---- ----------------ATAGAACCCACCTTCATG------GTCACATGTACTTTGCAAAA -GAGTTTCAATGTAGTCATACCTTAAGCTTTATTGTACACCTGGAATTGGAATGATTATG GAAATTATTGTTGCCTGGAAACTTTTTTCC------AAATTCTACTGTGTTTAAATATGC CTACAATAAACTGCCTGTGCTTAGACTCCCTG-AAGTCT-GATCCA-----GGTT--GAC AAAGTCAATCTGAA-CCAAATTTTCATTCTCACCTC-TTCACACGGTTTGTTTT--CCTC TATGACACCTGCAGGGACCCCCTCA----------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------- >ABcons1.txt TGTTGTAATAGGCGTGATCGGGGTCTCGGGATGTAACGTGTCAGGCTCCTCCCCATGTGTTAGGTACGTGCCACGTGTACCATCCAGTGGGCGTACACGAAGGGTTAAAAGATATATAAGTGCTTGTTAGAACTTAATAAACGCCATTTTGCCGCTCATCATATTGGTGTCACCTCGGTATTTGGCCAAGCCGCAGGCTCCCCTAAGCAACGAACATCACGGTTGCCTGCGAAAGGCAACA >ABcons2.txt TGTTATCTGGTGTGAACCAATCAGAGTGGGACATGACAGCACGGTTATGTAGGTAAAAATGTATATAAGCTGTGTTTAGTAGTGAATAAACGCCATTTTGCTGCTCATCATATTGGTGTGCGTCTGCAGTCATTTGGCCCTGATCAGGCTATTGGTCAGTGAGCGCAGAGGCCTAACACAGGTGGCTAACATCA >RSV_NC_001407 agggggaaatgtagtcttatgcaatactcctgtagtcttgcaacatgcttatgtaacgatgagttagcaa tatgccttacaaggaaagaaaaggcaccgtgcatgccgattggtggtagtaaggtggtacgatcgtgcct tattaggaaggtatcagacgggtctaacatggattggacgaaccactgaattccgcatcgcagagatatt gtatttaagtgcctagctcgatacaataaac gccattttaccattcaccaca ttggtgtgcacctgggttgatggccggaccgtcgattccctaacgattgcgaacacctgaatgaagcaga aggcttcattt >ACV_NC_001402 aatgtagtcttatgcaatactcttgtagtcttgcaacatgcttatgtaacgatgagttag caacatgccttataaggaaagaaaaagcaccgtgcatgccgattggtggaagtaaggtgg tatgatcgtggtatgatcgtggtatgatcgtgccttattaggaaggcaacagacgggtct aacacggattggacgaaccactgaattccgcattgcagagatattgtatttaagtgccta gctcgatacaataaac gccatttgaccattcaccaca ttggtgtgcacctgggttgatgg ccggaccgttgattccctgacgactacgagcacatgcatgaagcagaaggcttcatt >ALV_AY013304_LTR5 TGTAGTCAAATAGAGCCAGAGGCAACTTGAATAGTCTAAAGACCAAATAAGGAAAAAGCA AGACATTCCATATGCTCATTGGTGGCGACTAGATAAGGAAGGAATGACGCAAGGACATAT GGGCGTAGACGAAGCTATGTACGATTATATAAGCTGTTGCCACCATCAAATAAAC GCCAT TTTACCATCCACCACA TTGGTGTGCACCTGGGTAGATGGACAGACCGTTGAGTCCCTAAC GATTGCGAACACCTGAATGAAGCAGAAGGCTTCA >CHRZ_4931177_B_16 tgttgtaataggcgtgatcggggtctcgggatgtaacgtgtcaggctcctccccatgtgt taggtacgtgccacgtgtaccatccagtgggcgtacacgaagggttaaaagatatataag tgcttgttagaacttaataaacgccattttaccgctcatcatattggtgtcacctcggta tttggccaagccgcaggctcccctaagcaacgaacatcacggttgcctgcaaaaggcaac a >HL1PROP_LTR5 TGACAATGACCATGAGCCCCAAATATCCCCCGGGGGCTTAGAGCCTCCCAGTGAAAAACA TTTCCGAGAAACAGAAGTCTGAAAAGGTCAGGGCCCAGACTAAGGCTCTGACGTCTCCCC CCGGAGGGCAGCTCAGCACCGGCTCGGGCTAGGCCCTGACGTGTCCCCCTGAAGACAAAT CATAAGCTCAGACCTCCGGGAAGCCACCAAGAACCACCCATTTCCTCCCCATGTTTGTCA AGCCGTCCTCAGGCGTTGACGACAACCCCTCACCTCAAAAAACTTTTCATGGCACGCATA TGGCTCAATAAACTAGCAGGAGTCTATAAAAGCGTGGAGACAGTTCAGGAGGGGGCTCGC ATCTCTCCTTCACGCGCCCGCCGCCCTACCTGAGGCCGCCATCCACGCCGGTTGAGTCGC GTTCTGCCGCCTCCCGCCTGTGGTGCCTCCTGAACTGCGTCCGCCGTCTAGGTAAGTTTA AAGCTCAGGTCGAGACCGGGCCTTTGTCCGGCGCTCCCTTGGAGCCTACCTAGACTCAGC CGGCTCTCCACGCTTTGCCTGACCCTGCTTGCTCAACTCTACGTCTTTGTTTCGTTTTCT GTTCTGCGCCGTTACAGATCGAAAGTTCCACCCCTTTCCCTTTCATTCACGACTGACTGC CGGCTTGGCCCACGGCCAAGTACCGGCGACTCCGTTGGCTCGGAGCCAGCGACAGCCCAT CCTATAGCACTCTCAGGAGAGAAATTTAGTACACA >BLVCG_LTR3 TGTATGAAAGATCATGCCGACCTAGGAGCCGCCACCGCCCCGTAAACCAGACAGAGACGT CAGCTGCCAGAAAAGCTGGTGACGGCAGCTGGTGGCTAGAATCCCCGTACCTCCCCAACT TCCCCTTTCCCGAAAAATCCACACCCTGAGCTGCTGACCTCA CCTGCTGATAAATTAATA AAATGCCGGCCCTGTCGAGTTAGCGGCACCAGAAGCGTTCTTCTCCTGAGACCCTCGTGC TCAGCTCTCGGTCCTGAGCTCTCTTGCTCCCGAGACCTTCTGGTCGGCTATCCGGCAGCG GTCAGGTAAGGCAAGCACGGTTTGGAGGGTGGTTCTCGGCTGAGACCACCGCGAGCTCTA TCTCCGGTCCTCTGACCGTCTCCACGTGGACTCTCTCCTTTGCCTCCTGACCCCGCGCTC CAAGGGCGTCTGGCTTGCA CCCGCGTTTGTTTCCTGTCTTACTTTCTGTTTCTCGCGGCC CGCGCTCTCTCCTTCGGCGCCCTCTAGCGGCCAGGAGAGACCGGCAAACA >STLV2_NC001815_LTR5 tgacagtgactctgaccctgggccttctaacctcggggccgcccagggcgagtcatcagc ttaaaaggtcacgctgtctcacacaaacaatcccgggaacaggctctgacgtttccccct gcagaccatttgaggaaccaggaactactctccagaaaaataacctcgcccttacccact tccccttgccttgaaaaacaaggctctgacgactacccccctcacccataaaatttgcct actcaataaaaacccaggcctataaaagcgcaaggacggttcaggagggggtcatctctt tccacctgcccgctgtgcctaccttggagatccattccgcccgggcggctcggtcgagac gtctcgttgagctctgtctcccgttccaggcacctcctgaaccgcgcctttcagggtaag tctccccccaggttgagctaggctacgactcccgtagtcgctcccgcagggtcggtcgag gctccctgaccctccggccgcgcacggttaggctctggtttgcaacccaacttccgcgtt cttgtcttattctccgccgaaatcgaaagcacagtgcccctccctgcaccactggcccgg ggccagcatcctgccagggacgcgcgcctgctaaacccgagggtgttttgggcctctccg ggaggggtacccagccacttcgggtccttgttctctccgggagagacaaaca >PTLV3_NC003323 tgtcagtgatgatgagcttcgagacggaccacaaccaccaactggaggacaaatagctga atcatccgtctgagggccgtctcacactaggattgtgcccaaaaagaacaccaaggctct gacgtctctccctaccctggctcccggaaaaaaccgaaaaccacccatttcctcatgttt gcctaaggctctgacgataaccctaaaaatttgactagcaaataaagaaccctgggtcct ataaaaggggtgagcaacctaaaaatgggatctctctttgcaccttgcctacccctccct cggccgtggaccagccctggtcgcctcgcttacctgggtcgccgtttcgtgaccgggcca tctccctgctgtttgacggcaccccgcgtacttcgcttcctcctgctcggtaagatccca ccgggtcgagctaggccatcactccctggccgctcccctggagctctctctcgtagctct tacggttgctctcccccggcacggggcccaggactttctctacttccttgtttcaagtct ctttctttggtgagcgacctaaatcgaaagtagcacttctgctgcctgcagcgaggcttg gcccggggccaacgcctgtgagattacccagctcggagttgggcctcaagaaagtaaggg ctaaagctgctagccctaggggagaaagcaaaca >STLV1_NC000858_LTR5 tgacactgaccatgagccccaaatatcccccgggggcttagagcctcccgctgaaaaaca tttccgcgaaacagaagtctgaaaaggtcagggcccagactaaggctctgacgtctcccc ccggagggcagctcagcaccggctcagactaggccctgacgtatccccctgaaaagcaat catgagctcagacctccgggaagccaccgggaaccacccatttcctccccatgtttgtca agccgtcctcaggcgttgacgacaacccctcacctcaaaaaacttttcatggcacgcata cggctcaataaaataagaggagtctataaaagcgtggagacagttcaggagggggctcgc ttttttctcctacgcgcccgccgccctacctgaggccgccatccacgccggttgagtcgc gttctgccgcctcccgcctgtggtgcctcctgaactgcgtccgccgtctaggtaagttta gagctcaggtcgagaccgggcctttgtccggcgctcccttagagcctacctagactcagc cggctctccacgctttgcctgaccccgcttgttcaactccacgtctttgtttcgctttct gtttcgcgccgttacaaatcgagagttccacccctttccctttcattcacgactgactgc cggcttggcccacggcaagtaccgcggactctactggctcggagccagcagcagcctatt ctataacactctccaggagagaaatttagtacaca >HTLV2_NC001488_LTR5 tgacaatggcgactagcctcccaagccagccacccagggcgagtcatcgacccaaaaggt cagaccgtctcacacaaacaatcccaagtaaaggctctgacgtctccccctttttttagg aactgaaaccacggccctgacgtccctcccccctaggaacaggaacagctctccagaaaa aaatagacctcacccttacccacttcccctagcgctgaaaaacaaggctctgacgattac cccctgcccataaaatttgcctagtcaaaataaaagatgccgagtctataaaagcgcaag gacagttcaggaggtggctcgctccctcaccgaccctctggtcacggagactcaccttgg ggatccatcctctccaagcggcctcggttgagacgccttccgtgggaccgtctcccggcc tcggcacctcctgaactgctcctcccaaggtaagtctcctctcaggtcgagctcggctgc cccttaggtagtcgctccccgagggtctttagagacacccgggtttccgcctgcgctcgg ctagactctgccttaaacttcacttccgcgttcttgtctcgttctttcctcttcgccgtc actgaaaacgaaacctcaacgccgccctcttggcaggcgtcccggggccaacatacgccg tggagcgcagcaagggctagggcttcctgaacctctccgggagaggtctattgctatagg caggcccgccctaggagcattgtcttcccggggaagacaaaca >HTLV3_DQ462191_LTR5 tgtcagtgatgatgagcctcgaggcggaccacaaccaccaactggaggacaaatagctga atcatccgtctgagggccgtctcacactaggattgtgcccaaaaagaacaccaaggctct gacgtctctccctaccctggctcccggaaaaaaccgaaaaccacccatttcctcatgttt gcctaaggctctgacgataaccctaaaaatttgactagcaaataaagaaccctgggtcct ataaaaggggagagcaacctaaaaataggatctctctttgcaccttgcctacccctccct cggccgtggaccagccctggtcgccctcgcttacctgggtcgccgtttcgtgaccgggcc atctccctactgtttggcggcaccccgcgtacttcgcttcctcctgctcggtaagatccc accgggtcgagctaggccatcactccctggccgctcccctggagctctctctcgtggctc ttacggttgctctcccccggcaaggggcccaggactttctctacttccttgtttcaagcc tctttcttcggcgagcgacctaaatcgaaagtagcacttctgctgcctgcagcgaggctt ggcccggggccaacgcctgtgagattacccagctcggagttgggcctctagaaagtaagg gctaaagctgctagccctaggggagaaagcaaaca >STLV3_AY217650_LTR5 tgtcaatgatgatgaaccccaagacgaaccgcagccaccaactaggggacaaatagctga atcatccgtctgagagccgtctcgcaccgggatcatgcccaaaaaagaacaccagggctc tgacgtctctccctactctgactcccggaaaaaaccaaaaccaccgatttcctcatgttt tgcctaaggctctgacgataaccctaaaaaatttgactagcaaataaagaaccctgggtc ctataaaaggggagagcaacctaaaatgggatcactccttgcatctcgccaatccttccc ccggctgctaactgaccctggccgcccctgcttactcgggtcgccacttcgtgaccaggc catcctcccgctatttggtggcgctccgcgcactccggttccttccaatcggtaagatcc cactgggttgagctaggccatcatccccaggccgctcccctgaaactccttcgcgtggct tttaaggttgctctccctcagcaaggggcccaggactttctctacttccttgtttcaagt ctcttctttcggcggtcgatctaaatcgaaagtagcacttctgctgcctgcagcgaggct tggcccggggccagcgcctgtaacactacccagctcggagttgggtcctaaagagtcagg gctatagctgctagccctaaggaaggaagcaaaca >LTR12_ERV1_Primates ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------TGAGAGGTGAAGCCAGCTGGGCTTCCTGGGTCGGG TGGGGACTTGGAGAACTTTTCTGTCTAGCTAGAGGATTGTAAACGCACCAATCAGCGCTC TGTGTCTAGCTAAAGGTTTGTAAACGCACCAATCAGCACTCTGTAA-------------- --AAACGCACCAATCAGCGCTCTGT-GTCTAGCTAA-------AGGWTTGTAAACGCACC AATCAGCACTCTG----------------------------------------------T AAAAA----CGCACCAATCAGCG------------------------------------- -----------------------------------------CTCTGTGTCTAGCTAAAGG TTTGTAAACGCACCAATCAGCACTCTGTAAAAACGCACCAATCAGCAC------------ -------AGCACTCTGTAAAATGGACCAATCAGCGCTCTGTAAAATGGACCAATCAGCAG GACGTGGGCGGGGCCAAATAAGGGAATAAAAGCTGGCCACCC-------GAGCCAGCAGC GGCAAC--CCGCTCGGGTCCCCTTCCACGCTGTGGAAGCTTTGTTCTTTCGCTCTT-CAC AATAAATCTTGCTGC-----TGCTCACTCTTTGGGTCCGCACTACCTTTATGAGCTGTAA CACTCACCGCGAGGGTC----------------------------------------TGC GGCTTCACTCCTGAAGTCAGCGAGACCACGAACCCACCGGGAGGAACAAACAACTCCGGA CG------------------------CGCCACCTTTAAGAGCTGTAACACTCACTGCGAA GGTCTGCGGCTTCACTCCTGAAG--TCAGCGAGACCAC---GAACCCACCGGAAGGAAGA AACTCCGGACA-CATCTGAACATCTGAAGGAACAAACTCCGGACACACCATCTTTAAGAA CTGTAACACTCACCGCGAGGGTCCGCGGCTTCATTCTTGAAGTCAGCGAGACCAAGAACC CACCGGAAGGAACCAATTCCGGACACA--------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR12D_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------TGAGAGGTGACAACGTGCTAGCAGCCCTCGCTCGCTCTCGGCGC CTCCTCGGCCTCGGCGTCCGCTCTGGCCGCGCTCGAGGAGCCCTTCAGCCCGCCGCTGCG CTGTGGGGGCCCCTCTCTGGGGCTGGCCGAGGCCGGAGCCGGCTCCCTCTGCTCGCGGGG AGGTGTGGAGGGAGAGGCGCGGGCGGGAGCCGGGGCTGCGCGCGGCGCTCGCGGGCCGGC GCGGGTTCCGGGTGGGCGCGGGCTCGGCGGGCCCCGCACTTGGCGCAGCCGGCCGGCGCC TGCTGGGCTTGATCGGGGGACGAGCTCCCTCTGGGCTGCCGGAGTGCCCGGGCTAGGTGC CGCAAAGTCCCGCGGCGAGTGCCAGTGAGAGGTGAAGCCGGCTGGGCTTC-TGGGACGGG TGGGGACTTGGAGAACTTTTCTGTCTAGCTAAAGGATTGTAAACGCACCAATCAGCACTC TGTGTCTAGCTAAAGGTTTGTAAACGCACCAATCAGCACTCTGTGTCTAGCTAAAGGTTT GTAAACGCACCAATCAGNGCTCTGT-GTCTAGCTAATCTGGTGGGGACTTGGAGAACTTT TGTGTCTAGCTAA-----------------------------------------AGGATT GTAAA----CGCACCAATCAGCA------------------------------------- -----------------------------------------CTCTGTGTCTAGCTAAAGG TTTGTAAACGCACCAATCAGCACTCTGTCAAAACGGACCAATCAGCTCTCTGTAAAATGG ACCAATCAGCTCTCTGTAAAATGGACCAATCAGCTCTCTGTAAAATGGACCAATCAGCAG GATGTGGGTGGGGCCAGATAAGGGAATAAAAGCAGGCCACCC-------GAGCCAGCAGC GGCAAC--CTGCTCGGGTCCCCTTCCATGCTGTGGAAGCTTTGTTCTTTTGCTCTT-TGC AATAAATCTTGCTGC-----TGCTCACTCTTTGGGTCYGTGCCGCCTTTATGAGCTGTAA CACTCACCGCGAAGGTC----------------------------------------TGC AGCTTCACTCCTGAAGCCAGCGAGACCACGAACCCACCGGGAGGAACGAACAACTCCGGA CGGAAGGAACGAACAACTCCAGACG-CGCCGCCTTTAAGAGCTGTAACACTCACCGCGAA GGTCTGCAGCTTCACTCCTGAAG--TCAGCGAGACCAC---GAACCCACCAGAAGGAAGA AACTCCGGACA-CATCTGAACATCTGAAGGAACAAACTCCGGACACACCATCTTTAAGAA CTGTAACACTCACCGCGAGGGTCCGCGGCTTCATTCTTGAAGTCAGCGAGACCAAGAACC CACC----------AATTCNGGACACA--------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR12B_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------------------------------------------TG AGAGGTGAAGCCAGCTGGACTTCCT-G---GGTCGA----GTGGGGACTTGGAGAACTTT TCTGTCTAGCTAG-----------------------------------------AGGATT GTAAAAAAATGCACCAATCAGCA------------------------------------- -----------------------------------------CTCTGTATCTAGCTAAAGG ATTGTAAATGCACCAATCAGCACTCTGTAAAAA--------------------------- ---------------------TGGACCAATCAGCACTCTGTAAAATGGACCAATCAGCAG GACGTGGGCGGGGACAAATAAGGGAATAAAAGCTGGCCACCC-------CAGCCAGCAGC GGCAAC--CCGCTCGGGTCCCCTTCCACGCTGTGGAAGCTTTGTTCTTTCGCTCTT-CAC AATAAATCTTGCTGC-----TGCTCACTCTTTGGGTCCGYRCCACCTTTAAGAGCTGTAA CACTCACCGCGAAGGTC----------------------------------------TGC GGCTTCATTCTTGAAGTCAGCGAGACCACGAACCCACCGGAAGGAACAAACAACTCCGGA CA------------------------CRCCACCTTTAAGAGCTGTAACACTCACTGCGAA GGTCTGCGGCTTCACTCCTGAAG--TCAGCGAGACCAC---GAACCCACCAGAAGGAAGA AACTCCGGACA-CATCTGAACATCTGAAGGAACAAACTCCGGACACACCATCTTTAAGAA CTGTAACACTCACCGCGAGGGTCYGCGGCTTCATTCTTGAAGTCAGCGAGACCAAGAACC CACCGGAAGGAACCAATTCCGGACA----------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR12F_ERV1_Primates ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------TGAGAGGTGAAGCCAGCTGGACTTCCTGGGTCGAG TGGGGACTTGGAGAACTTTTCTGTCTTACAAGAGGATTGTAAA----------------- -----------------------ATGCACCAATCAGCGCTCTGTAA-------------- --AAACGCACCAATCAGCGCTCTGT-AGCTAGCAAG------AGGATTGTAAAATGCACC AATCAGCGCTC------------------------------------------------T GTAAAA---TGCACCAATCAGCG------------------------------------- -----------------------------------------CTCTGTA------------ -----AAATGCACCAATCAGCAGGATCCTAAAAGTAGCCAATCG---------------- ------------CAGGGAGGATTGAAAAAAGGGCACTCTG----ATAGGACAGA-AACGG AACATGGGAGGGGACAAATAAGGGAATAAAAGCTGGCCACCC-------CAGCCAGCAGC GGCAAC--CCGCTCGGGTCCCCTTCCACGCTGTGGAAGCTTTGTTCTTTCGCTCTT-CAC AATAAATCTTGCTGC-----TGCTCACTCTTTGGGTCCGTGCCATCTTTAAGAGCTGTAA CACTCACCGCGAAGGTC----------------------------------------CGC GGCTTCATTCTTGAAGTCAGCGAGACCACGAACCCACCGGAAGGAAC---CAACTCCGGA CACA-------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR12C_ERV1_Homo TGAGAGGTGACAGCGTGCTGGCAGCCCTCACAGCCCTCGCTCGCTCTCGGCGCCTCCTCT GCCTGGGCKCCCACTCTGGCCGCRCTTGAGGAGCCCTTCAGCCCGCCGCTGCACTGTGGG AGCCCCTTTCTGGGCTGGCCAAGGCCGGAGCCGGCTCCCTCAGCTTGCAGGGAGGTGTGG AGGGAGAGGCGCGGGCGGGAACCGGGGCTGCGCGCGGCGCTTGCGGGCCAGCKCGAGTTC CGGGTGGGCGTGGGCTYGGCGGGCCCCGCACTCGGAGCGGCCGGCCGGCCC-GCCGGCCC CGGGCAGTGAGGGGCTTAGCACCTGGGCCAGCAGCTGCGGAGGGTGTRCTGGGTCCCCCA GCAGTGCCRGCCCACCGGNGCTGTGCTCGATTTCTCGCCGGGCCTTAGCTGCCTCCCCGC GGGGCAGGGCTCGGGACCTGCAGCCCGCCATGCCTGAGCCTCCCCCCCCCCTCCGTGGGC TCCTGTGCGGCCCGAGCCTCCCCGACGAGCGCCGCCCCCTGCTCCACGGCGCCCAGTCCC ATCGACCACCCAAGGGCTGAGGAGTGCGGGCGCACGGCGCGGGACTGGCAGGCAGCTCCA CCTGCGGCCCCGGTGCGGGATCCACTG---GGTGAAGCCAGCTGGGCTCC-TGAGTCTGG TGGGGACTTGGAGAACCTTTATGTCTAGCTAAGGGATTGTAAATACACCAATCAGCACTC TGTATCTAGCTCAAGGTTTGTAAACACACCAATCAGCACCCTGTGTCTAGCTCAGGGTTT GTGAATGCACCAATCGACACTCTGTTATCTAGCTACTCTGGTGGGGACTTGGAGAACCTT TATGTCTAGCTAAGGGATTGTAAATACACCAATCAGCACTCTGTATCTAGCTCAAGGTTT GTAAA----CACACCAATCAGCACYCTGTGTCTAGCTCAGGGTTTGTAAATGCACCAATC GACACTCTGTATCTAGCTAATCTAGTGGGGACGTGGAGAACTTTTGTGTCTAGCTCAGGG ATTGTAAACGCACCAATCAGCACCCTGTCAAAACGGACCAATCAGCTCT----------- -------------CTGTAAAACAGACCAATCGGCTCTCTGTAAAATGGACCAATCAGCAG GATGTGGGTGGGGCCAGATAAGAGAATAAAAGCAGGCTGCCC-------GAGCCAGCAGT GGCAAC--CCGCTCGGGTCCCCTTCCACACTGTGGAAGCTTTGTTCTTTYGCTCTT-TGC AATAAATCTTGCTGC-----TGCTCACTCTTTGGGTCCACACTGCCTTTATGAGCTGTAA CACTCACCGCGAAGGTC----------------------------------------TGC AGCTTCACTCCTGAAGCCAGCGAGACCACGAACCCACCGGGAGGAACGAACAACTCCAGA CG------------------------CGCCGCCTT-AAGAGCTGTAACACTCACCGCGAA GGTCTGCAGCTTCACTCCTGAG---CCAGCGAGACCAC---GAACCCACCAGAAGGAAGA AACTCCGAACA-CATCCGAACATCAGAAGGAACAAACTCCGGACACGCCRCCTTTAAGAA CTGTAACACTCACCGCGAGGGTCCGCGGCTTCATTCTTGAAGTCAGTGAGACCAAGAACC CACC----------AATTCCGGACACA--------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR12E_ERV1_Homo TGAGAGGTGACAACGTGCTAGCAGNCCTCNCAGCCCTCGCTCGCTCTCGGCGCCTCCTCG GCCTBGGCGYCCACTCTGGCCGCGCTTGAGGAGCCCTTCAGCCCACCGCTGCACTGTGGG AGCCCCTCTCTGGGCTGGCCAAGGCCGGAGCCGGCTCCCTCTGCTTGCGGGGAGGTGTGG AGGGAGAGGCGCGGGCGGGAACCGGGGCTGCGCGCGGCGCTTGCGGGCCAGCGCGRGTTC CGGGTGGGCGCGGGCTCGGCGGGCCCCGCACTCGGAGCGGCCGGCCGGCCCTGCTGGCCC CGGGCAATGAGGGGCTTAGCACCCGGGCCAGCGGCTGCGGAGGGTGTACTGGGTCCCCCA GCAGTGCCGGCCCACCGGCGCTGCGCTCGATTTCTCGCCGGGCCTTAGCTGCCTCCCCGC GGGGCAGGGCTCGGGACCTGCAGCCCGCCATGCCTGAGCCTCCCACCCAC-TCCATGGGC TCCTGTGCGGCCCGAGCCTCCCCAACGAGCGCCGCCCCCTGCTCCACGGCGCCCAGTCCC ATCGACCACCCAAGGGCTGAGGAGTGCGGGCGCACGGCGNGGGACTGGCAGGCAGCTCCA CCTGCGGCCCTGGTGCGGGATCCACTA---GGTGAAGCCGGCTGGGCTTC-TGGGTCGGG TGGGGACTTGGAGAACTTTTCTGTCTAGCTAAAGGATTGTAAACACACCAATCAGCACTC TGTGTCTAGCTAAAGGTTTGTAAATGCACCAATCAGCACTCTGTGTCTAGCTAAAGGTTT GTAAATGCACCAATCAGCACTCTGT-ATCTAGCTAATCTGGTGGGGACTTGGAGAACTTT TCTGTCAA----------------------------------------------AGGTTT GTAA-----CGCACCAATCGG--------------------------------------- ------------------------GTGGGGACTTGGAGCACTNCTGTGTCTAGCTAAAGG TTTGTAAATGCACCAATCAGCACTCTGTAAAAACGGACCAATCAGCAC------------ ------------------------------------TCTGTAAAATGGACCAATCAGCAG GATGTGGGTGGGGCCAAATAAGGGAATAAAAGCTGGCCACCC-------GAGCCAGCAGT GGCAAC--CCGCTCGGGTCCCCTTCCACGCTGTGGAAGCTTTGTTCTTTTGCTCTT-CGC AATAAATCTTGCTGC-----TGCTCACTCTTTGGGTCCGCACTACCTTTATGAGCTGTAA CACTCACCGCGAAGGTC----------------------------------------TGC AGCTTCACTCCTGAAGTCAGCGAGACCACGAACCCACCGGGAGGAACAAACAACTCCGGA CG------------------------CGCCACCTTTAAGAGCTGTAACACTCACTGCGAA GGTCTGCAGCTTCACTCCTGAAGT-CCAGCGAGACCAC---GAACCCACCAGAAGGAAGA AACTCCGGACA-CA---------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR2_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------------------TAAGG AAGGAGACCA--CCTCTCC-CATTGTCTC---CTGTTTCATG---AGAA----------- ---------------AGCAA--AAAGTTAAAAAAAGAAGCAGAAGTGAGATCAATGGCCA GATGGTTT-AGTGCCAAG-----AACCAGGCCTGG---------------------TAGT TA-AACATCAACTCCTGACCTAACC-GC-TTGTGCTATCCATAGATTCCAGATATTGTAT GAGGAAGACTTGTGA-----AACTTTCTGTTCTGTTCTGC-TAGCCCCC-ATCACTGATG CATGTAGCTCTCAGTCA----------------------------------------TGT AGCC-CCCACTTG--CACAA-TGTATCATGACCCTTTCACGTGGACCCCTCAGAGTTGTA AG-----------------------------CTCTTAAAAGGGACAGGAATCTTTACTTT GG---GGAGCTCGGATCTTGAGACGCGAGTCTACCAAT---GCTCCCAGCTGATTAAAGC CTCTTCCTTCATAGAACCGGTGTCTAAGAGGTTTTGTCTGTGACTGTTCCTGCTACA--- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR2B_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------------------TGAGG GAAGAGAGAGACCCTCTCA-TATTGTTTTATATTGTTTTATACTCAGTAC---------- --------CTGTTTTAAGAA--AAAAAGAAAAAACAACAAGGAAGTAAAACCAA-AGACA GGCAGCCC-GGCGCCAGGCCCGAAACCAGGCCTGGGCCTGCCTGGCCTAAACCCAGTAGT TA-AAAATCAACTCATGACTTAGAA-AC-CGATGTTATTCATAGATTCCAGACATTGTAT AGAAGAACATTGTGA-----AACTCCCTGCCCTGTTCTGT-TTCTCTCTGACCACCGGTG CATGCAGCCCCT-GTCA----------------------------------------CGT ACCC-CCTGCTTG--CTCAAATCAATCACGACCCTTTCATGTGAAATCTTTAGTGTTGTG AG-----------------------------CCCTTAAAAGGGACAGAAATTGTGCACTC GG---GGAGCTCGGATTTTAAGGCAGTAGCTTGCCGAT---GCTCCCAGCTGAATAAAGC C-CTTCCTTCTACAACTCGGTGTCTGAGAGGTTTTGTCTGCGGCTCGTCCTGCTACA--- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR2C_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----TGCTGCCCTCCTCC-CACCACCTTGCCTAGTTCACAAGACAGGAG---------- --------GAAAGAGAGAAAGCAAAAAGTTAGAAARAAACAAAAGTAAGATAAATAGCCA GACAACCTTGGCACCACC-----ACCYGGCCCTAGGAGT----TAAAAAAAAGTAATAAT AATAACATCAACCCCTGACCTAAACTAC-TTGTGTTATCTGTAAATTCCAGACATTGTAT GAAAAAGCATTGCAA-----AACTTTCTGTTCTGTTA----------------GCTGATG CATGTAGCCCCCAGTCA----------------------------------------CGT TCCC-CAYGCTTG--CTCGA-TTTATCACGACCTTTTCACGTGGACCCCTTAAAGTTGTA AG-----------------------------CCTTTAAAAAGGCCAAGAATTTCTTTTTC AG---GGAGCTCGGCTCTTAAGACGCAAGTCTGCTGAT---GCTCCCRGCCGAATAAA-C CTCTTCCTTCTTTAATCCGGTGTCTGAGGAGTTTTGTCTGYGGCTCGTCCTGCTACA--- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR6B_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------TGTAATGCCCAACCTTGTTTTTACTAACCCTGTTTTTAGACTCTCCCTTTCCT TTAATCACCTAGCCTTGTTTCCACCTGAATTGACTCTCCCTTAGCTAAGAGAGCCAGACA GACTCCATCTTGGCTCTTTCACTGGCAG-----------------------CCCCTTCCT CAAGGACTTAACTTGTG--CAAGCTGACTCCCAGCACATCCAAGAATGCAATTAACTGAT AAGATACTGTGGCGA-----GC-TATATCCGCAGTTCC-CAGGAATTCGTCCGATTGATA ACG---CCCAAAG--------------------------------------------CCC CGCGTCTATCACCTTGTAATAGTCTTA-AAGCCCCTGCACCTGGAACTGTTTACTTTCCT GTAACCATTTATCCTTTTAACTTTT-TTGCCTACTTTACTTCTGTAAAATTGTTTTAACT AGACCCCCCCTCCCCTTTCTAAACCAAAGTATAAAAGA---AAATCTAGCCCCTTCTTCG GGGCCGAGAGA-ACTTTGAGCGTTAGCCGTCTCTTGGCCGCCGG--CTAAATAA-ACGGA CTCTTAATTCGTCTCAAAGTGTGGCGTTT-TCTCTAACTCGCTCGGGTACAACA------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR6A_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----------------------------------------------------------T GTGAT-ACCCTACCTTGTTTTAACNTGAATNGACTCTCCCTTAGCTGAGAAAGCCGGACG GACTCCAT-TTGGCTCCTTCATTTGCAAGACATCAAGGGCTCCTTACCCACCCCCTTCCT CAAGGACTTAACTTGTG--CAAGCTGACTCTCAGCACATCAAAGAGTGCAATTAACTGAT AAGGTACTGTGGCAA-----GC-NATGTCCGCAGTTCC-CAGGAATTCGCCCGGGTGATA GTA---CCCTAAAGCCCCCGCGTTTGTGTCCGGCAGATAGCAC-------CCAGAGCCCC CGCACCTATCACCTTGTGATGAATTTA-AAGCCCCTGCACCTGGAACTGTTTGTTTTCCT GTAACCATTTGTCTTTTTAACTTTT-TTGCCTGTTTTACTTCTGTAAGATTGCTNCAGCT AGGCTCCCCCTCCCCTTTCTAAACCAAAGTATAAAAGA---AAATCTAGCCCCTTCTTCG GGGCCGAGAGA-ATTTCGAGCGTTAGCCGTCTCTCGGTCGCCGG--CTAA-TAA-AGGAC TCCTGAATTCGTCTCAAAGTGTGGCGTTTCTCTATAACTCGCTCGGTTACAACA------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR4_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------------TGAAGCAGGAGATATAAAAAAA AAGAAAGAGAGAAAAACAAGTTTTCTGTACTGGGCTGACTCACTCCAAGGCCCAGCGATA GGCAGGGCTCTGNCAGGGCTTTGATAGCACTATCTGCAGAGCCGGGGCCCAGAAGGAATG GGCTCCAGAGCCTCTCCCTGCCGTCCTAGAG--CAGGGATGAGAAAAACAAGTTCTTCTT ATCAGTTTCCCCCTTTG--AAATTCTTTCCCCATACCATTATTCCTTTGTTCTGCTCTCA TAACTATTTTTGTAA-----C--TATTTCTGCAAGTTTGCAAGGATTTTGTAAGTTCCTG TTT---TCCCATCTG------------------------------------------TGC AGTATGGCGAAGGTCACAAGACATGCCTGAGTTGCAAAACCTGTCACTGTTTGATA---- --AACTGCCTTTGTTCTGCTTCTGT-AAGCTTGCTTGCCCGCCCTACAGGTTTCACGCCA CTAACTGGCCACCCCCTTTCGGATGCATGTATAAAAGT---CAAGCCCTGTCTTTGTTCG GGGCTCAG----CCTTTGGATGTTAATC-CG-CTGGGCCGGTGG--CCACCTAATAAAAT CCTCCTGTCCCACCC-ATTGGTCTCTCCTGTCCCTTGAT--TCCTGCAACA--------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR15_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------TGGAACAGGAATTAAAAGAAATTAA--AGAATGCATAAGCAAAAACTCAATT GTATGTAGGGAAACCCAATTCC-TCCTGA-------GGAAGAGAAAGAGGTGGAGTCCTT TAAAAATTCACTGCCTG--TTTTTCCGTCTGTAGCTAGTGAGCCTTATCTCTCCCTTTCC CAGGCATTGTGAAGA-----CCCTGTTTCTCCAGCTGTGCAGCTGCATGGTCACTAGACA GATAAACTCAAGTTG------------------------------------------TAA AACATGTTTTTCCTTGAAAAGTAAGAA-ATGATGTAATACATGTCTCAACTGAATA---- --A-CTGTCTTTGTTTCTCACTTCT-GTAGTAAGCTTCCCCCTGCACAGATCTCCCCTC- --------TCACCCCAT---GAA---ATGCTTAAAAGG---TAACCTGACTCTTTGTTCA GGGCTCAGT---CCTTTGGATGTTAATC-TGACTGGGCTGGTGCACCTAAATAATAMATA YATCCTCCTCAACCCCATCGGTCTCTCTGATTCCTAAATCATCCCCAAACA--------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER110_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------TGAAAACTGAAACCA--- ------------ACATAATTTCCTGTCCCTGDGT-TAAA---CAATACTGGGACCAGGCA TACTTTTC-------TGTTCCTA-TGTTAAACAATACTGAGACCAAGCAAAAATAACTTA GCTACTT-GCTCCAGGAAATACYT--GCTCCTGGAAGA-TAAGACTGTGAACCAACTAAA ATAGCTTACTTATCAA----GACTAACAGCTTA---CTCATCAAAACTC--GTTTCAAGA CCCTCGCCTCACTGTGCC------CACCAATCCAAAGCTATTA-------TGTC-----A TAAACTCTGCCCAATCCCAACCAGTTCCCCGCCTT---GCAAGACCCACCTTAAAATCA- CCCAGCCCAGGCCCTAAAACCC------------TA-TAAATAATCCTNCCCTAATTTTT CCATTTTGAGACACTACTAAGACTCTGTATCTATGTCA---AGGTGATGTTCTTCCTTAC TGCAGTAAGTCTAATAAAAACTC--AGCTTTGCTTGATCAACAGGTTTTNTTTTCTGGTG GTCTTTTTGGGGAGYCGACAGT-------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER110A_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------TGAGAACTGAAACCATCT ACCACCC-----ACACAGCTTACTGACTGTCTACATTAA---CATGACTTTACTATTCCA CTGTCTTCATCAACATAACTTTACTATTCCAGGAAACTCTTGCCCAGGAAGATAAAAGTT GCAAATA-ACTTTATTGTTCATTTCAGGAACTTCCTAA-AAAACCCATCAACTCTTCAAT AGAAAGCATCAAACGA----CAGTTTATCCCCAAGACTCTTTGAAACCCTTGCCTCAAAA CCCTCACCTTGCTGTGTCTGTGTCCACCAATCCTAAACTATTA-------TATC-----A TGATCCTTACCCAATCCTAATCAAGCCCCTACATT---GAAAGACCTGCCTTAAA----- ------TCAGACTCCAAAATCT------------CAATAAATATCCTGACTTTGCCCTCC CTCCTCTGAGACACTACTAAGACTCTGTA------------AGGTGGTGCTCYCCCTTAC CACAGTAAG--CAATAAA--CTC--AGCTTTGTCTTATCA-------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER52A_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------TGATGGCAGCGGCGGCCCGTCTGGAGTGGCCGCTGCCATGATGCCGGCTGC AGCGGGGGAGGCGCGGCCGGGGCTGCG---------CGCTCCATGGAGCCAGCGGGAGCC GGGAACAGGCGGGAGCCCCGCCC---CCTTCCGAGTTGGGGCGGGAGCTCCCCGGGTGCA GCTGCAGCCGCCCA---AACGCAGACCCAGGCCTCCCTGTGCTCTTGGG--GGCCGGGAG CAG----GCAGGAGCCCCACCCTCCCGGGCACAGCTGCA--GCCGCCCAG-CCGCGGCTS CGGAC-CCAGGCATCYC-TGCGCTCTCGGGGGCCTGGGAAGGCCCC------CCTGCCCC CACAGGCTTGGAA-------GTGC--CTGC-----TCCCACTGCAGCTG---------GC CTCTCCCCGCTCCCGGCG-CCCG----------------CTCCGCAGGCTCAGAAGTGCC TGCTCCCGCTGCCTGGCCTCTCCCTGCTCCYGGCGCCCGCTCCGATTTCGGAGCAAAGTT GYGGCCGAGCCCGGGCGCTGTCGCAACCCGGCCGGGTGTGTGCACGCTCGGGGCAGCGCT GACACGC-CAGCCCCCTGCCGCCTCGGCCCCCTCCGGACTTTGGGCGCCGACGAGCATGG GAGGGAGGCCGAGGGGGGGCTGAGGGCAGCTCGGCGCKGGCCTGCAGGCGCCCCTCGGCA CGAACAGCCTGG-GTGCC-ATGAACGGCAGCAGGAGGCAGACA-------GGCTCCTGGG CAGAAAGGGGCGGGTCCCCGGTGAAACCCCACCTTCAAGCCAGGGACGGCCTGAAGCC-- TGGGGGCCGGGCTGCCAGTTCCGGGTGGAGTCCGCGGMCCGGAGTGAGAACTTRTGGTGC TTTTTC-TGGGCCCACCCATGGCCGCCCATGGA---CC---AATCAGCACGCACTTCCTC CCCTCTGARGCCCATAAAAACCCCGGACTCAGCCAGACT--------------------- ------------------------------------------------------------ -------YAG--RCAGAYGWYGGGACGACCAGCTGCAGAG-AGGAGCTACCCACTCCGGG GTCT--CCTCTCTGCTGAGAGCTGCASAGWC--GWCGGGATGACCTGCCTGCAGAGAGGA GCTACCCACTCCAGGGTCTCCTCTCTGCTGAGAGCTGAACACTCGTCGGGACGMCCTGSC TGCGGARAGGAGCTACCCACTGCGGGTCTCCTGAGAGCTGTTCTGTCGCTCAATAAAGCT CCTCTTCGCCTTGCTCACCCTCCACTTGTCCGCGTACCTCATTCTTCCTGGACGTGGGAC AAGAACTCGGGACCCACCGAATGGCGGGGCTGAAAGAGCTGTAACACAAACAGGGCTGAA ACACGCCCCCTGCTCACCACGTTGTGGGCGAC--------------------GAGAAGGA GAGAAGAGCTGTGGCCCTTCGGGGAGCCCAGACCTAGGAGCTCCCCGAGCCAGGGCTGTG ACACCCTCTTTGGGGCTCTGCGGTTCCTGGCGTCTCCAAGCTTCTGGGCGCCACC--GCG TTCCCCGGTGCCMRCWGTGGAAGCTGCTTGCGGTACGCCTGGTCCAGCCGCAGCCTTGCA CGGAGCCGGCACCTGTGCCGGCGCCTGGAGCTGCCTGCCCCGCCGCAGC---CRGCGTGC CTGGCTGTGCGCAGTGGCCGGACCCCACGCTCGCTTGCTCACACACCCCTCACCGCTCCG CGCCTGGCTCGCCCTTGGCAGGCATGGGATCCAGGCCRGTAGCGCGAGCYGAGCGCAGCC TGCCAGGCCGAGT-GGGCGGAAT-----GAGCCCAGCGGGCCCAAGCAAAACTCGGGCAA AGGCGCCACCGGCCACAGAGGTTTCCGGCTGGVRAAGCGACACCCCAAGGATCCCGTGAC A >MER52D_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------TGATGTTAATGATGGCAGCGGTGGGCCRTCCRGAGTGGCCGCTGCCATCAC GCCGGCTGCAGCGGGGAGGTGTGAGCAGTGGCGGCAGGAGCGGCTGTGGGAGCAGCAGTG GTGGCGGTGGGACCCCTGTGCCCTGTGTCCCCTGTGCCCTGCATCCCCAAGGCAGCYGAC TGCACCACCCCCACCCTCACACAGCCAGGCAGGACCCGCTCCCAGGCCCAGAGCCTCCGC CACTCCAGACCCTGGCCCCGTGTCACCACTCTCACCCGCCACCACTGCGGGGAGGGC-GC AGGGAGGANGGCAGAGCTGGGNCCCNGGCGCTGCCANGCCCCATGGAGCCGGCGGGAGCC AGGGACAAGTGGGAGCCCCCCCGGAGCCCGCCGCCCTGGGG-GCCACCGCGATGGGGCCA GGCCGAGTCGCCCACTGGAGGGGGAGCAGTGCGGTTGGGCATAGAGGGGCGGGCAGAGAG GGGCCCAGCGAGGACCTGGAGCCCCCACCCCAGGCTGCAAGGAGGCACAG-CCAGGGCTG CATGCTCCACGGAGCTGGTGGGAGCCAGGGAGCAGGCAGGAGCCCCGCCCCTNCNGNNNN GGCAGGGTGGGAGCTCCCAGGTGCAGCTGCAGCTGCCCTGCTGCAGCTGTGGACCCAGGC ATCTCTGCACTCTTGGGGGCCCGGGAAGGCCCCCCCTACCCCTGCAGGCTNGGRGGTGTC TGCTCCCGCTGCCTGGCCTCTCCCTGCTCCCAGCACCTGCTCCRATCTCGGAGCARNGTT GGGGCCAAGCCYGGGCGCTGTCACAGCCTGGCCGGGTGTGCACACACTCGGGGCAGCGCT GACACAC-CAGCCCCCTGCCACCTCGGCCCCCTCCAGACTTTGGGCRCCAACAAGCATGG GAGGGAGGCCAAGGGGGGGCTGAGGGCAGCTCGGTNCTGGCCTGCAGGTGCCCCTTGGCA TGARCAGCCTGG-GYRCC-ATGRACAGTGGCAGGAGGCAGACA-------GGCTCCTGGG YGGAAGGGGGYGGGTCCCCAGTGAAGCCCCACCTTCAAGCCAGGGAGGGCCTGAAGCC-- TGGGGGCTGGGCTGCCAGTCCC-----------RCAGACCAGAGTGGGAACTTGTGGTGC CTTTTCCTGGGCCTGCCCATGGCCGCCCATGGA---CC---AATCGGCATGCACTTCCTC CCCTCTGAGGCCCATAAAAGCCCCAGGCTCAGCCAGACCAGAGACAGAGSTGCACAGAGG AC--------------------------------CTACCCGCAGAGAGATGAGGGCTCTG CTAGAGCTGA--GGAGATGACGGGATGACCAGCTGCAGAGCAGGAGCTACCCACTCCAGG GTCT--CCTCTCTGCTGAGAGCTGAAGACTT--GATGGGATGACCTGCCTGCAGAGAGGA GCTACCC--------------TCTCTGCTAAGAGCTGAACACTCATTGGGACACCCTGGC TACGGAGAGGAGCTGCCCACTGCRGGTCTCCTCTGAGCTGTTCTATTGCTCAATAAAGCT CCTCTTCGTCTTGCTCACCCTCCACTTGTCTGYGTACCTCATTCTTCCTGGACRCAGGAC AAGAACTCGGGACCTGCTAAATGGCGAGGCTAAAAGAGCTGTAACACAAACAGGGCTGAA ACATGCCCCTTGCTTGCCACATTGCGGGTGACAAGAAGAAGAGAAGAGAGGAGAGAAGGA GAGAAGAGCTGTGGCCCTTTGGGGAGCCCAGACCTGGGAGCTCCCTGAGCCAGGGCTGTG ACTCCCTCTTTGGGGCCCTGTGGTTCCTGGCATCTCCAAGCTTCYAGGCACCACTCTGCA TTCCCCGGTGCCAGCTGTGGAAGCTGCTTGTGGTGCGCCTGGTCCAGCTGCAGCCTCGCA GAGAGCCAGCACCCATGCCGGCACCTGGAGCTGCCTGCCCCACTGCAGCAGCCNGCATGY CTGACTGTGTGCAGTGGCCGGACCCCACGCTCACT----CACACACCCCTCACNGCTCCA CACCTGRCTTNNCCTTGGCAGGNNTGG-ATCNAGGNCCTTGGCAGGCATGGGATCCAGGC CRGTAGCNTGAGCCAAGCACAGCCTGCCAGGCYSAGTGGGCCCGAGCAAAACTCAGGCAA AGGHACCACHGGHCACAGAGGTTTCTGGCCAGAAAAGBGACACCCCAAGGATCCCGTAAC A >MER52C_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------TGATGGCAGTGGCTGCTGCCATCACGCTGGCTGC AGC-AGGGAGGCGCGGCTGGGGCTGCA---------CACTCCATGGAGCCGG-------- ---------TGGGAGCCCCGCC----CCTTCTGAGTTGGGACGGGAGCTCCCCGTG--CC ACTGCAGCCGCCTA----AACCGCAGCTGCAGACCCAGGCCTCCTGCTC----CACGGAG CAG----GCAGGAGCCCCGCCCTCCTGGGCGGGGCTACA--GCCACCCAAACTGCGGCTG TGGATCCGAGCCTCCCTGTGCTCTTGGGGGAGCCGGGAGCAGGCAGGA----TCTGCCYT CCCGGGTGCAGC---------TGCAGCTGC-----CSCACCCGCGGCTGCAGACCTGGGC CTCYC---ACTCCAGGRAGCAGG------------------CAGGAGCCAGGGACAAGCG GGAGCC------CCGCCCCTTCCGAGTTGGCAGGGCGGG----AGCTCCCGGGTGCAGCT GCGGCCTACCCT---CCCAGGCGCAGGAC--CTGGGCGTCTCTGCAGCCTG--CACCCTT GGGGGGC-CCAGGAAGGACCCWCCCCATCCCTGCAGGCTCAGGGGTGTCTGCTCCCACTG CCTGGCCTCTCTCTG----CTCCTGGCGCCT--GCTCTGATCTCGGAGCGGGGTTGGGGC CAAGC--CCYGG-G-GCC-ATGAATGGCAGCGGGAGGCAGACA-------GATTCCTGGG CGGAAGGGGGCGGGTCCCCAGTAAGGCCCCACCTTCAGGCCAGGGAGGGCCTGAAGGC-- TGGGGGCCGGGCTGCCAGTCCC-----------GCAGACCAGAGTGGGGACTCGTGGTGC CTCTTC-CGGGCCCACCCATGGCCGCCCATGGA---CC---AATCGGCACACACTTCCTC CCCTCTGAGGTCCATAAAAGCCCTGGGCTCAGCCAGAGCAGGGCAGAGGATGGCCAGAGG ACAAAGRGGGCAGAGAGACAATGGGACWGGATGACCAGCTGCAGAGAGGAGCTACCCTCT CTGCTGATAGCTGGAGAYGATGGRACGACCAGCTGCAGAG-ATGACCAGCTGCAGAGAGG AGCTACCCTCTCTGCTGAGAGCTTCAGAGACCTGCAGAGATGACTTGCCTGCAGAGAGGA GCCACCCTCTCCAGGGCCTCCTCTCTGCTGAGAGCTGAACACTCGATGGGACGACCTGCC TACAGAGAGGAGCTACCCACT--------CCTCTGAGCTGTTCTAACACTAAATAAAGCT CTTCTTCGTCTTCTTCACCCTTCACTTGTCTGCGTACCTCATTCTTCCTGGACGCAGGAC AAGAACTCGGG-----CAAAGGCGCCGCGGCCACAGAGGTTTCCCGCCAGAAAAATCG-- --ACACCCCARAGATCCCGTAACA------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR7Y_ERV1_Primates ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------TGTCAGGCCTCTGAGCCCAGGCCAGGCCATCGCATCCCCTGT GACTTGCACGTATA-CATCCAGATGGCCTGAAGTAACTGAAGATCCACAAAAGAAGTAAA AACA----------GCCTTAACTGATGACATTCCACCATTGTGATTTGTTCCTGCCCCAC CCT-AACTGATCAATGTACTTTGTAATCTCCCCCACC---CTTAAGAAGGTACTTTGTAG TCTCCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCAC----------CCTTGAGAA TGTACTTTGTGAGATCC--ACCCC-TGCCCACCAGAGAACAACCCCC-TTTGACTGTAAT TTTCCATTACCT-TCCCAAATC---------CTATAAAA--CGGCCCCACCCCTATCTCC CTTCGCTGACTCTCTTTTCGGACTCAGCCCGCCT--GC---ACCCAGGTGAAATAAACAG CCATGTTGCTCACACAAAGCCTGTTT-GGTGGTCTCTTCACACGGACGCGCATGAAA--- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR7B_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------TGTCAGGCCTCTGAGCCCAAGCTAAGCCATCATATCCCCTGT GACCTGCACGTATA-CATCCAGATGGCCTGAAGCAACTGAAGATCCACAAAAGAAGTGAA AATA----------GCCTTAACTGATGACATTCCACCATTGTGATTTGTTCCTGCCCCAC CCT-AACTGATCAATGTACTTTGTAATCTCCCCCACC---CTTAAGAAGGTACTTTGTAA TCTCCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCAC----------CCTTGAGAA TGTACTTTGTGAGATCC--ACCCCCTGCCCGC---AAAACA--------TTGCTCCTAAC T--CCACCGCCTATCCCAAAAC---------CTATAAGAACTAATGATAATCCCACCACC CTTTGCTGACTCCTTTTTCGGACTCAGCCCGCCT--GC---ACCCAGGTGAAATAAACAG CCTTGTTGCTCACACAAAGCCTGTTT-GGTGGTCTCTTCACACGGACGCGCGTGACA--- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR7A_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------TGTCAGGCCTCTGAGCCCAAGCTAAGCCATCACATCCCCTGT GACTAGCACATATA-CGCTCAGATGGCCTGAAGTAACTGAAGAATCACAAA-GAAGTGAA AATGCCC-TGCCCCACCTTAACTGATGACATTCCACCACAAAAG---------AAGTGAA AAT-GGCCGGTCCTTGCCTTAAGTGATGACATT--AC---CTTGTAAGAGTCCTTTTC-- -CTGGCTCATCCTAG--------CTCAAAAATCTCCCCTAC-------------TGAG-- --CACCCTGCGACCCCC--ACTCC-TACCCGCCAAAGAACAACCCCCCTTTGACTGTAAT TGTCCTTTACCT-ACCCAAATC---------CTATAAAA--CAGCCCCACCCCTATCTCC CTTTGCTGACTCTCTTTTCGGACTCAGCCCGCCT--GC---ACCCAGGTG--ATTAAAAG CTTTATTGCTCACACAAAGCCTGTTT-GGTGGTCTCTTCACACGGACGCGCATGAAA--- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR7C_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------TGTCAGGCCTCTGAGCCGAAGCTCAGCCATTGTAACCCCTGT GACCTGCACATATA-CGTCCAGATGGCCTGCAGGAGCCAAGAAGTCTGGA--GCAGCCGA AAAACCA-CAAAAGAAGTGAAACAGCCAGTTCCTGCCTTAACTGATTAA-CCAACCTTAC GAC-ATTCCACCATTATGACTTGTTCCTGCCCTACCCTAACTGATCAATCGACCTTGTGA CATTCTTC-TCCTGGACAATGAGTCTCATGAT-CTCCCCAC----------C-------A TGCACCTTGTGACCCCC--TCCCC-TGCTGACAATAGATAA--CCACCTTTAACTGTAAC TTTCCACTGCCT-ACCCAAGTC---------CTATAAAG--CTGCCCCTCTCCTATCTCC CTTCGCTGACTCTCTTTTCGGACTCAGCCCACTT--GC---ACCCAAGTGA-ATAAACGG CCTTGTTGCTCACACAAAGCCTGTTTAGGTGGTCTTCTCATACGGACGCGCGTGACA--- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR71A_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------------------------TGTGAGAAAACATTTTAAAT GGTCCATTTTCAAGGCATGATAAATCTAAGTACTGGCAGCCAGCCTGCGA--ATGTGACA AACTGCA-TGDCTCAT--GCACCTAGAAGGTCACV--ATAAGTGAA--CAGAATGTAGAG GAGGGGTCAGCCCATAAAAGGGAAGAAAGTTTTGTTATTGGGAAATTGAAACTTAAGCAG GGAAGGGGACCAGGGTATAACCTTATAAGGGGGATAATGAA---------ACT--TAGGC GATRTYYAGGAAGATTGTAACCCCATAGTACTCRACCAATGAGGAACTGGGGGARGGACT TGYATGCTAGGAGATAAATTAC---------CTGCTGTAA-CTGCCCCGGGTGTGCCTGC CTAC-CAGACACCTGATCTTG--CAAGACCACCA--TT---AA--AAGTCTCGCTTCCAC TGTTCTTCGTGTCTCTGAGTCCATTCTTTGGGTTTGGATGGGTGAATGTGTGTTTCTCAC A----------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR71B_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----------------TGAAGGAAATAATGTATACAGTGGTCCATTTCCAAGACAAAGT GCCTTGAATCGGCTTAGGTCAGCAAACTACAGAAGAAACAGGATATACTAGGCCCCTGCT TGGATAGCCGATGCCTGCTTGTCGGCCTCCCCCTTCCCCCTTCCTCCCCCCCCCCTTAGT TGCCCTCACCCAAACCA--AAGAAGTTTAGTCTAAGATGAAAGTTTACTA--GCCTGCAA AATAGCT-CGCTTTGTCTGTTCTTATCAGCCTGCCCAGCTACTTAGGTCATAAGTCAAAT ACTTGAAGAGCCCCTGAGCTAACTAGGATTGCAATGCATTGTGGGCTGCAACAAAATGCA GCAAGACAACCCTAAAGAAAACACCTAAAGCCCCTACCCAACA-------ACCAATAGGC GACGTCCGGGAAGATTGTGACCCCATAGTACTCAGCCTATGAGGAACCGGGGGAGGGACC TGCGCACTAGGGGATAAATTGC---------TTGTTGAAA-CTGTGCTGGGTGTGCCTGC CCAT-CAGACACCCGATCTTG--CAAGACCGTCA--TT---AA--AAGTCTCACTTTCGC TGTTCTCCGGGTCTCTGAGTCCATTCTTTGGGTTTGGACGGGTGA--GTTTGTTTCTCAC A----------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >GaLV_M26927 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ AATGAAAGAAGTGTTTTTT---TTTAGCCA----ACTGCAGTAACGCCATTTTGCTAGGC ACAC-------CTAAAG--GATAG---------GAAAAAT-----ACAGCTAAGAACAG- ------------------------GGCCAAA-CAGGATATCTGTGGTCATGCACCTGGGC CCCGGCCC-AGGCCAAGGACAGAGGGTTCCCAGAAATAGA---------------TGAGT C--------AACAGCA-GTTTCCAG--------------------------------CAA GGACAGAGGGTTCCCAGAAATAGATGAGTCAACAGCAGTTT--CCAGGGTGCCCCTCAAC CGTTTCAAGGACTCCCA--------TGACCGGGAATTCACCCCTGGCCTTATTTGAACTA ACCAATTACCTTGCCTCTCGCTTCTG-----TACCCGCGCTT---------TTTGCT--- ---------ATAAAATAAGCTCAGAAACTCCACCCGGAGCGCCAGTCCTTAGAGAGACTG AGCCGCCC---------GGGTACCCGTGTGTCCAATAAAACCTCTTGCTGATTGCATCCG GAGCCGTGGTCTCGTTGTTCCTTGGGAG-GGTTTCTCC---TAACTATTGACCGCC---- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >FLV_LTR3_M18247 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------CCTACCCCAAAA---TTTAGCCAGCT-ACTGCAGTGGTGCCATTTCACAAGGC ATGGAAAATTACTCAAG--TATGTT-----CCCATGAGAT-----ACAAGGAAGTTAGA- ------------------------GGCTAAAACAGGATATCTGTGGTTAAGCACCTGGGC CCCGGCTTGAGGCCAAGAACAGTTAAACCCCGGATATAGC---------------TGAAA C--------AGCAGAA-GTTT------------------------------------CAA GGCC-----------------------GCTACCAGCAGTCT--CCAGG---CTCCCCAGT -------------------------TGACCAGGGTTCGACCTTCCGCCTCATTTAAACTA ACCAATCCCCACGCCTCTCGCTTCTG-----TGCGCGCGCTT---------TCTGCT--- ---------ATAAAACGAGCCATCAGCCCCCAACGGGCGCGCAAGTCTTTGCTGAGACTT GACCGCCCC--------GGGTACCCGTGTA--CGAATAAACCTCTTGCTGATTGCATCTG -ACTCGTGGTCTCGGTGTTCTGTGGGCGCGGGGTCTCA---TCGCCGAGGAAGACCTAGT TCAGGGGTCTTTCA---------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MLV_J01998 ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ AATGAAAGACCCCTTCATAAGGCTTAGCCAGCTAACTGCAGTAACGCCATTTTGCAAGGC ATGGGAAAATACCAGAGCTGATGTT-----CTCAGAAAAACAAGAACAAGGAAGTACAGA GAGGCTGGAAAGTACCGGGACTAGGGCCAAA-CAGGATATCTGTGGTCAAGCACTAGGGC CCCGGCCCAGGGCCAAGAACAGATGGTCCCCAGAAACAGAGAGGCTGGAAAGTACCGGGA CTAGGGCCAAACAGGATATCTGTGGTCAAGCA-----CTAGGGCCCCGGCCCAGGGCCAA GAACAGATGGTCCCCAGAAATAGCTAAAACAACAACAGTTT--CAAGAG-ACCCAGAAAC TGTCTCAAGGTTCCCCAGA------TGACCGGGGATCAACCCCAAGCCTCATTTAAACTA ACCAATCAGCTCGCTTCTCGCTTCTG-----TACCCGCGCTT---------ATTGCTGCC CAGCTC--TATAAAAAGGGTAAGAACCCCACACTCGGCGCGCCAGTCCTCCGATAGACTG AGTCGCCC---------GGGTACCCGTGTATCCAATAAAGCCTTTTGCTG-TTGCAGCGC CAGTCCTCCGATAG--ACTGAGTCGCCCGGGTACCCGT---GTATCCAATAAAGCCTTTT GCTGTTGCATCCGAATCGTGGTCTCGCTGATCCTTGGGAGGGTCTCCTCAGAGTGATTGA CTGCCCAGCCTGGGGGTCTTTCATT----------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER66C_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------TG-----AGGTA-GGAGACTGGCAGGACTTGTTTTCTG GTCACAACCCTGCTGACCAAAACAGGAT----CTGGTCCAGACAGGATAAAGTGAAGA-A ACNRGCAGGAACCAGCAGATGGTGACAAAAGYGATCCCTAGCTGCCCTCATTGCTCATTA GCATAA----------------------------------GACACTCCCACCAGCGCCAT GACAGTTT--ACAAATGCCATGGC-AATGA-CCCNGAAGTT-ACCACCCCTTTCCATGGC AATGACCTGG--------------AAGTTACTGCCCCTTTCCTAGAAAGTTC-TAAATAA CCTGCCCCTCAATTTGCATTGACCCA-CCCCTTAATTTGCAT---------GTAATTGAA AGTGG---GTTTAAGTGAG-TATAAATACAGTTGCCAAGAGCCCATACATTGCNGACTCT GGGTGCACTGCCTATGA-GTTAGCCCTGCT-CTGCAAGGAGCAGTACCGTTCAATAAAAG ATTGCTGTCTAACACCACTGGCTCACCCTTGAATTCTT---TCCTGGGTAAAG-CCAAGA ACCCT--CCTGGGCTAAGCCCCAATTTTGGGGCTTRCCTGTCCTGCATCATCTGNCTACC ATCA-------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER66D_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------TG-----AGGTA-GGAGATCAGCAGGACTCGTTTTCCG AGCAC--------CGGTCACGACCCTG-----CTGATCAAAACAGGATGTAGCAAAGA-A ACCRGCCAAAACCAGCTAGGACTAGGAA-------------------TTATAATACATTT GCATAA----------------------------------GACACTCCCACCAGCGCCAC GACAGTTT--ACAAATGCCACGGC-AACGA-CCCGGAAGTT-ACC------TTATATGGT T----CCGGG--------------AACTCCCCGCCCCTTTTCCAGAAAGTTCGTGAATAA CCCGCCCCTTATTTAGCATATAATTA-AGAGTAGGTATAAAT---------ATAGCTAGC CAGCA---ATCCA--CGAG-TGCTACTCTGG--GCC---ACTCTGCCTATGGGATAGCCC ---TGCTCTGTCTACGG-AGCAGCCAT--T-TTGCTGTACGCTGTTGC-TCTAATAAA-- CTTGCTTTCTTTCACCGTCGGCTCGCTCTTGAATTCTT---TCCTGAGCGAAG-CCAAGA ACCCT--CCCGAGCTGAGCCCCAATTTTGGGGTTCGCCTGCATCA--------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER66B_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------TG-----AGGTA-GGAG----GTGGGACTCGACTCCGG A-------------------GGCGGGGC----TTGAACA--CCAGACCAAATTGAAGA-- -CTAGCTGAAACAGGGCCAGGGCAAAAG-------------------------CAGCTTT CCATAA----------------------------------GACCCACCCACCGGTGCCAW GTGAGTTT--ACCATTGCCATGGC-AACAG-CC-AGAAGTT-ACTGCCCCTTTCCATGGC AATGACCCGATGACCCA------AAAGTTACCACCCCTTTTCTAGAAATTTC-TGCATAA ACCGCCCCTTAATTTGCATGTAGTTA-AAAGTGGGTATAAAT---------ATGACTGCA GAACT---GCCTC--TGAGCTGCTACTCTGGGCGCA------CTGCCTATGGGGCAGCCC ---TGCTCTGCAAGGAGCAGTRCCTCTGCTGCTGCTGTRCACAGCCGC-TTCAATAAAA- GTTGCTGTCTAATACCACCARCTCGCCCTTGAATTCTT---TCCTGGGCGAAG-CCAAGA ACCCT--CCCGGGCTAAGCCCCAATTTGAGGGCTCGCCTGTCCTGCATCA---------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER66A_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------TG-----AGATA-GGAG----GTGGGACTCGACTCCGG A-------------------GGCGGGGC----TTGAACT--CCAGACCAGATTGAAGA-- -CTAGCTGAAACAGGGCCAGGGCAAAAG-------------------------CACCTCT CCATAA----------------------------------GACACACCCACCGGTGCCAW GTGAGTTT--ACCATTGCCATGGT-AACAG-CC-AGAAGTT-ACTGCCCCTTTCCATGGC AATGACCCGG--------------AAGTTACCACCCCTTTTCTAGAAATTTC-TGAATAA CCTGCTCCTTAATTTGCATGTAGTTA-AAAGTGGGTATAAAT---------ATGACTGCA GAACT---GCCTC--TGAGCTGCTACTCTGGGCGCA------CTGCCTATGGGGCAGCCC ---TGCTCTGCAAGGAGCAGTRCCTCTGCTGCTGCTGTRCACAGCCGC-TTCAATAAAA- GTTGCTGTCTAATACCACCARCTCGCCCTTGAATTCTT---TCCTGGGCGAAG-CCAAGA ACCCT--CCCGGGCTAAGCCCCAATTTGAGGGCTCGCCTGTCCTGCATCA---------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER41B_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------TGTCAGAGG CGTTTGAACCAGAGCAACTCCATCTTGAATAGGCGCTGGGTAAAATRAGGCTGARACCTA CTGGGCTGCATTCCCAGACGGTTA-----AGGCATTCTAAGTCACAGGATGAGATAGGAG GTCGGCACAAGATACAGGTCATAAAGACCTTGCTGATAAA-ACAGGTTGCAGTAAAGA-A GCCGGCYAAAACCCACCAAAACCAAGATGGCCACGAGAGTGACCTCTGGTCGTCCTCACT GCTCATTATATGYTAATTATAATGCATTAGCATGCTAAAAGACACTCCCACCAGCACCAT GACAGTTT--ACAAATGCCATGGC-AACGT--CAGGAAGTT-ACCCTATATGGTCTAAAA AGGGGAGGAACCCTCAGTTCCGGGAATTGCCCGCCCCTTTCCTKGAAAAYTCATGAATAA TCCACCCCTTGTTTAGCATATAATCAAGAAATAACCATAAAA---------ATRGGCAAC CAGCA---GCCCT--CGGG--G-----CT----GCT------CTGTCTATGGAGTAGCCA ---TTCTTT-----------TATTCCTTTACTTTCTTAATAAACTTGCTTT--------- --CACTTT---ACTCTRTGGACTCGCCCT-GAATTCTT---TCTTGCACRAGATCCAAGA ACCCT--CTC---TTGGGGTCTGGATC-GGGACCCCTTTCTT--GTAACA---------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER41A_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------TGTCAGAGA CGTGTGAACCAGAGCAACTCCATCTTGAATAGGAGCTGGGTAAAATRAGGCTGARACCTA CTGGGCTGCATTCCCAGACGGTTA-----AGGCATTCTAAGTCACAGGATGAGATAGGAG GTCGGCACAAGATACAGGTCATAAAGACCTTGCTGATAAA-ACAGGTTGCAGTAAAGA-A GCCGGCYAAAACCCACCAAAACCAAGATGGCCACGAGAGTGACCTCTGGTCGTCCTCACT GCT--------------------------------------ACACTCCCACCAGCACCAT GACAGTTT--ACAAATGCCATGGC-AACGT--CAGGAAGTT-ACCCTATATGGTCTAAAA AGGGGAGG-------------------------------------------CATGAATAA TCCACCCCTTGTTTAGCATATCATCAAGAAATAACCATAAAA---------ATRGGCAAC CAGCA---GCCCT--CGGG--G-----CT----GCT------CTGTCTATGGAGTAGCCA ---TTCTTT-----------TATTCCTTTACTTTCTTAATAAACTTGCTTT--------- --CACTTT---ACTCTRTGGACTCGCCCT-GAATTCTT---TCTTGCACRAGATCCAAGA ACCCT--CTC---TTGGGGTCTGGATC-GGGACCCCTTTCTT--GTAACA---------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER41C_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------TGTCAGAGG CGTTCGAACCAGAGCGACTCCATCTTGAATGAGGGCTAGG-AAAATGAGGCTGAGMCTTG CTGGGCTGCATTCCCAGRAAGTCA------GGCATTCCTAACCTCTAGATG---TTTACG GTTA----AGGGAACAGATTAATAA-----TGTTTACTAA-ACAGACCCAGACTTGGG-A GT--GTCCAGATATCCCGATATCTKGAGAAC----AGAGGCATTCCTAAT--TTCKCTTT AAA-------------------------------------GATAATAATATTG--ATTCT TGCAAAAK--ATAGTAATTAAGCA-AAGAT--KRRCAATCC-TTTGTCACAAGCCCTTGT AGCAGAGCACATCTC-----------------------CCCCGTAATGTTCTTTGGCTTT GTTATCCTATATATAAACAAGCATT--GTACCTAGGGTGGAC---------GCSTTCCTC CTSTT---GCTTT--CGGG--AACGCCCT----GCT------CTGTCTATGGAGTAGCCG ---TTCTTT-----------CACTMCTTTACTTTCTTAATAAACTTGCTTT--------- --YACTTT---ACACTGTGGAATCACCCT-GAATTCTT---TCTTGCATGAGATCCAAGA ACCCT--CTC---TTGGCGGTTGGATC-AGGACCCCTTTCTT--GTAACA---------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER41D_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------TGTTAGGGA AGCAGGAGCCTAGGAGAGCCAGAGTGACACCATTTTAAAATCAACTCCATCTTAAAACTA GCAAGGCACATTCCTTGCCAGTCA-----CGAC--CCATGGTCCTAAGATG---TTTACA GTTG----AGGAAGCAGCTTGAWAA-----TACCTACAAGGACACACTCCTACAACAACA GAAAGTCCAGATGTCCCAATACCCATAACAATATATGCTTTCAAGATAATTATAGTCATG CTTTGATGT--------------------------------ACTTACGCACTAA-AATGT CAAAGATA--GTTTTCTTTAAATC-AATATAMTAATAAATT-TTGTCATGCTGTCAGCCC ACCCGCACG-------------------------------------TAGGCACAGCTTAG TTTAGTCTTTACATAGACAAGACTC------CTATATAAGAA---------AAGTTTAAG ACAGA---GATGG--CGCG--TTC-CTCC----GCC------TNCTTTCCGGGGACGCCC ---TACTCTG----------TAATGGAGTAGTTT-TTAATAAACTTGCTCTT-------- CTCACTGT---ACTCCGCA-ACTCGCCTT-GAATTCCT---TCCTGTGCGAGATCCAAGA ACCCT--CTC---TTAGGGTCTGGATC-GGGACCCCTTTTTCTGGTAACA---------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER41E_ERV1_Primates ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------TGAGACAGGAATAATACAGGGTGGTCGCAGGAGAAT--AGAAAATT CCAGGCAGCAGTTTCACATGACTA-----GCAAAAGGAAACTGTTGAAAT-AGCTGCATA AGCTAGG---------GGCTGATAAGAC----CCTGAAAAACCAGGGTGTGGGCCAAG-- -CTGGCTAAGACCGACTGGACCCAACATGGCGCTGGATTTGACCTAGGTTTCACCTAGGA CCTCATTATATGCT----------CATTAACATACTAAATCACACACCCACCAGCGCCAT GACAGTTCCGGGAACACCCATATTTGGTGTAAAAATGGGTG-GCACCACAGTTCCGAGAA ATCTCCAC-------------------------CTTTTTCC-AGGAATCTTCATGAATAT TCCACCCCTTGGTTAAAGAAACCC------------ATAAAG---------GTAGAAGCC CCAAA---CCCCAT-TGGG-CGCGACTC--------------CTCTCTTGAGTACGCCCG CACTCCCCTTTCTTGAG-TGTGTACTTTTCGCTTTGCAATAAA--TCTCCG--------- --TACTTTCACTATTTTCTGACTCATCCTTGAATTCCT---TCTCGCGACGGTGTCAAGA GCCTGGACACCGGCTGGGGTCGAGG------TCCCACCGGCGTTTGGGGACCTCCCCCAG CCCACCGGTATCA----------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER41G_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----------------------------------------TGAGATAGGAATAGCACTG GGTGGTCGCAGGAGGATGGAAAAACCCAAACAACAGCTAAAACAAGAACTAGGCAAAGAA ACCACAGGATAACAGAAAACCCAAAATAAGGGAGAGAAAATGGCCAAAACCCTGGTCAGG GTGACATGTCCATGACTCTTCCAGGCAAACCCAAATAAGGGAGAAAGGGGGTGGTAATCA GGGGNGGGGTCCCTGAAATCCCCTCCTTTTCCAGAATACCTAATGATTATTCCACCCCCT AATTAAAGAAACACCCATAAAATAGGAATGCTGGGTGGTCACAGGAGAAGCAGGAAAATA TCAAGCAGCAATTTCACATARCAG-----CAAGAAAGGAGCTGTTAAAATTAGCTACAAG GACAAGGATGAGCCTGGGCTGATAAGAC----CCTAACAAAC-AGGATGGGGGCTAAG-- -CTGGCTGAAACTGGCTRGGTCCAACATGGCACTGGATTTGACCCATGCCCTACCCCAGA CCTAATTATATGCT----------CATTACCAYACTAAATCACACACCCACCAGTGCCAT GACAGATCTGAGCATGCCCATATTTAGTATAAAAATGGGTG-GCACCTCAATTCTAAGAA ATCCCCAC-------------------------CTTTTTCCTAGAAAACCTAATGATTAT TCCACCCCCTAATTAGAAGAGCCC------------ATAAAA---------TTAGAAACC C-AAA---CTCCAT-TGTG-CACGACTCA-------------TTCTCCCGAGCACGCCCG CACTTCTCT--CTTAAG-TGTGTACTTTT-GCTTTGCAATAAAAGCTTCTT--------- --GCCTTTCGCTTCATTCTGACTCATCCCTGAATTCTT---TCTTGCGATGGTGTCAAGA ACCTGGACACTGGCTGGGGCTGGGGCTGGGGTCTCACTGGCATCTGGAGACCCACCTNAG CCCTCCAGCAACA----------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER50_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ TGTTAGAG-TAGGTAGCTAGGCAGRCATGAGCAGGGCAGGAGAGGGCNCCCCCCACACAC ACCACGAATGTCGGGTGACCATCAGGTGATGGTCAGGCGGTTGTTAAACTGTCTCTCTAA AA-TAATAATTGGTCACAGCCAGCGCCAGG--GAAARGCAGTCTCCTAATAGATAGAAAA C---ACCTGAARCTGGTGATCAGCAGCTTCCCGATAAGATCTCAGGAGTTGGGCGAGTGA GCTCAAGCATGCGCACTAAGA------GGCAA--AA-TGRCGGAGTTTAACCGGCATATG ------------ACCTTCCTCTAGGAACACTCCAATGGTAA-GGGAARAATGCCTCAART GAGCATGTGCACAACTCCAGTAAACACACTGTGCATGCGGCCCYTCCCAAGTGCTGGCAG GCCACTGCGCACGCGG----------ACAGCCCACCCCAAGG---------AAAAATCAA GGGAGGAGRAACGCAAACCCCGGAAGCATGCCGAT--GTATAAAACCCC-AAGTCAAAGG TCAAACCGCGCACTTGG-TCTCTCAAGTCGCCCGCTTGGCCCTCTTCCAAGTGTACTTC- GCTTCCTTTCGTTCCTGCTCTAAAACTTTTT--AATAA---ACTTYCACTCCTGCTCTAA AACTTGCCTCGGTCTCTTTTTCTGCCTTATGCCCCTCAGTCGAATTCTTTCTTCTGAGGA GGCAAGA-ATTGAGGTTGCTGCAGACCTG----TACGGATTCGCCGCTGGTAACT-CAG- ---------ATACCTTCCACCGGTAACA-------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER50B_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ TGTTA----CAGGTAGTTAGGCA----TGAGCGGGGCAGGAGAGGGCTCTCCCCCCACCC ACTAGAAATGTCRGGTGA-----------TGGTTCGGCAATTATCRCATTGCCTCTCTAA AARTGATAAATTG--GCAGCCAGYGCCAGG--GAGAGGCCATTTCCTGATGGTCC----A C---ACCTGTTAACATYAA--AATGTTAATTGAATGCAGACCCCAGGGAGAAGCAACT-- TCCTGGGCATGCACATTAAGA------GACAA--AAATGGCGAAGT-----------ATG ------------ATCTTCCGG-GTACACTCTCCACCRGAAAAGGGAAGAAAGCCTCAGAT GGGCATGCGTATAACTCCC-TAAACACACTGCGCGTGCT-CAATTCCCAAGGGTAAGGAG GGCACTGCGCATGCAG----------GAAGCCCACCCTAAGG---------GAAGAATCA TGGGAAAGAGGCG---AGCCTATAAAAGTCCTA----GGATCAAGGTTA-AACAGGGCAC TTTTTCTTCTCTCTTTG-ACCTTCAGGT-GCCCACTTGGGTCTCTTCCAAGCGMACTT-- ---TCCTTTCTTTCCTGTTCTAAAGCCTTTTTAAATAA---ACTTCCACTCCTGCTCTGA AACTTGCCTCAGTCTCTTTTTCTGCTTTATGCCCCTCAGTCRAATTCTTTCTTCTGAGGA GGCAAGR-ACTGAAGTTGCTGCAGACCCG----TAYGGATATGCCGCYGGTAACT-CAGG GTAACTCGGATCTCTTCCACCGGTAACA-------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER50C_ERV1_Primates ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------TGTTAGAGTAGGTAGTTAGACGT GAGCAGGGCAGGAGAGAGGGCCCCCAGGAATGTCGGGCATTTGTCAAGCCATGGTCAGGC GATTATAAATCTGTCCCTCTGAAATAATGAGCAGGACAAGGGAGGG-ACCCCAGAGCTGT CNGGCTCTCATCGGGTGA-----------NGGACAGGCGGGCATAAAACTGTCCCTCTGA GA-TAATAAGTGGCCACGACTGGCGCCGGGAGNGANAGGAGTCTTNCAACAGATAGAAAA C---ACCTGGAGCCAGCAA-------------GCCACAATCCCTGATAAGG--------- TTTCAAGCATGCGCAGTAAAG------GGGCA--AGATGGCGGAATTTGACCGGTATATG ------------ACCTTCCTCTGGGGGCGCTCGACCAGTAA-GGGAGAATCGCCCCAAGT GAGCATGCGCACGACTTCAGTAAACACACTGCGCATGCGGCCCCTCCCAAGTGCTGGCAG GCCACTGCGCATGCGGCAATTAAGCGACAGCCCGCCC-AAGG---------GAGGAACAA AGGGAGGAGACAGAGAGCCCGGGAAAAGATACGGG--GTATAAAAACCCTAAGCCAAGGA NCGAGCGGGGCACTTGA-TTTCTCAAGTCGCCCGCTTGGCCCTCTTCCAAGTGTACTCT- GCTTTCTCTAATAA--ACTCTCACTTTGCTTAAAATAA---ATTTTCCCTCCTGCTTTAA ACCTTGCCT-------------------GTGTCTCTCGNTTGAATTCTTTCCTCCGAGAA GACAAGGGACCGAGATTGCTGCGGANTCGCCACTCCGGAGTTTCTCCGGATAGCTGCAG- -----------ACTCACCGCCGGTAACA-------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR9_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------TGATACAGG AGTTAAGAAGAAATCACTT-AGGCAGATAGTAAGGGTATGG-GAGTCCTCGGTAAGGC-T TTTCTTTTTAATGAAAAGCAGCCC-----CA-AATCATTTTCTAACAAAGAGCAGCCTGT AAAGTCGAGCTGCAGACATAGACAAGCAAGCTGGGAGCTTGCACGGGTGAATGCCGGCAG G--AACTAGGGACTAGACATGTTCA------AGATGGCGGCT-CCATCTTCCCTTCTCTG CCAGCCACGTGTACAGTAAGG---AGCAGACA--AGATGGCGCCGGCCAAGTGGAAAGCC -----------CATTTGCATAATAAGA--TTAGGGTGGGGCGACCAGC--CTTCCCCGCG CGCTATGTAAACGTCATACCTG-----ATCGAACCAATCTG-TGAGCCCTACGTAAATCA GACACCGCCTCCTCAAGCCGGACTATAAAATCCGGCGC-ATC---------CGCCACCAG CCGG-----TCCTTTCCGCTCGGAAGACCCCTC-------TCTCTATAG-AGAG-AGCTG TTTCTCTTTCTCTTCTC--------TTCTGCCTATTAAAC-CTCCGCTCCTAA-A----- ------CTCCTCGTGTGTGTCCGTGTC--CTAAATTTT---CCTGGCGCGNG-ACGACGA ACCCCGGGGTA-TATACCCCAGACAACGTAGCCGCTTCA--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR9B_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------TGTTGTAGG AGTTATTAAGAAATTATTTTAGGCAGATAG-AGAGGAAAAG-GGGTCCTTGGGAAG---T TTTCGTTTCTTTTNAAAGCAGCTC-----CAGAAACATTTCTTGTCTAGCAGAAA----- AGCCCCGGCTCTTAGAGCCAGGCCGGCAANCTTTGA---TATGCAAATGCAGGCCATTAG A--AACT-GGGTCCACCCAACATGG------CGATTCCCACCGTCGTCTTCTTGCCCTTG CCCCACATGTGCCTGGCAACAT--GGCCGCCCCCACATATCCCCACGTGTGTAGAACATC ATGGCGCCCTGCATTTGCATATTAAAAGGCTAGGGTGGGAGGGCCAGT--TTTTTC-GCG GGCTACGTGAATGACATGCCTG-----GTCAAACCAATCCCCTGAGCCCTATGCAAATCA GACACCGCCTCCTCCAGCCTCCTCATATAACTGGCTGNTWTC---------CGCCGCACN CGGGGTTTCCTCTCTCGGCTTTGGAGCCCCCCTCCCTCTGTCTCTGTAC-AGGGGAGCTT CTTCCTTCTTTCTTCTC-CCTTCTTTCTTGCCTATTAAACTCTCCGCTCCTTA-AAAC-- ------CACTCCACGTGTGTCCGTGTCGTTTTATCTAA---ATCGGCGCGAGGACCAAGG ACCCTGGTGT----TCCTCCASTCATCGGAGCCGTATCA--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR19C_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------------TGTTATAGG AGATAGAAAGAAATTATTT-AGGTAGACAGTTAGGGTGAAGCGAGTCCCCGGCAGAAAAC TTTCCTTCTAACAAAAAGCAGCTCAAAAATAGCTCCCTTTCTAACCTCATGCAGTTCAAA GAAATCACTTCTCTTCTAACAAAGAGCAGCCTGAAAGATCAGGCNGTAAAACACAGATAA G-CAACTCNGGCACAGRRRRRR-TG------GGG----AGTCTCCTGGGTAATCACCAAA CTTCACACTTATACGATGGGC---CCCAGTAA--AAACAGTGGGCCTTAATAAGCACATT -----------CCTTTCCCTTTAGGCGCACTAAGATAGGGAAGCTAGAAGCGGACTGGGG GGGG-----------ATGCCTGCA---GCTGCAAGAAGATGTCTGGGAACAGGCA---CG GAAACTCTCCCTCCCAGATAAGCAAGACAAAGCAGCGCGGAG---------CAGCAGACT AAGA-----GTCCGCCTGCGTGGTCAAGGAATGGG----GTGGGAGCTG-ATAGAAAACT CTGCTCTATACAGATGG-CACACCTG-GTCCCAACTGAATCTTTGGGCCCTAGGAGGA-- ------TAAGACACCCCCTCCTCACTAGCCCCCTCCTC---ACTAGCCCATT-TATAAAA ACCCTGACATT-TTTACTGCAGCNCGGCAACCCGCTCGGGACCCCTCTCTGTGACAGAGA GCTGTTCTTTCCTTTTGCCTATTAAACTCCTGCTCCAANCTCACTCTGTGTGTGTGTGTC CGCGACCTCGATCTCCTTGGCCGTGAGACCAAGAACCTTGGTATTTACCCCAGACAACGA GGCTGCTTCA-------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR19B_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------TGACAGAGCAGGAGCACCATCATCTCGGACAAACAC TGCCATTTTAA---------GTTC-----CAGCTCCTTTTCCAGCCTYATGCATTTCAAG GAAATCACTTTYCTTCTAACTACAAGCAGCCAGAAAGAGCAGACAGTAAAATACAGATAA GACAGCTCGGGCACAGAGGGAGGTG------GKRGGAAAGTCTCTTGGGTAACTGCCAAA CTTYACCCTCATACAATGGGC---CCCAGTAA--AA-YAGKGGGCCTTAATAAGCACATT -----------CCTTTYCCTTCGGGTWCACTAAGATARGGAAGCTAAAAGCAGACTCAGG GAGGCGGCGGGGGGTATGCCTGCA---GCTGCAKRAAGATRTATGGGARCAGACA---YA CAA-YTSTCCCTCCCAGATAAGCACAACAAAGAGACACAGA-----------AGCAGTCC AAGC-----CTC--------TRATAAACTCTCTCA----CCCTGAATCC-TTAAAAACTC TTAGTCTGTA-AGAGAG-TGTGCCTCTGACCTAACTCGGCCAGAAGCCCCTCTCAGGT-- ------T----CGTTTTCTCTAAAATAAACCTGTCTTT---GTTGACTG--K-WGAGCCG CTTTTCGTGTT-TCTTTCCTCTTTCTTTAATTCTTACA---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER57E1_ERV1_Eutheria ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ TGTTAA-AATAATTAATTGGG-------AGGCCATTAGGCTGAGGTGGCTCCAGCACCCT GGGT------TCCTACGTAAGCA-AACC-GAAACCCAACTCAG----------TGTAAAT GGT-----------AAAACGAAAC----------TTAAGCTT--AACCAATCAGAAACCG CCAACTAACCTCTAACTA------------GGGACTTTCCAC---------TGGAATGAT CCAAATAAGGCTA---CTGCTCCAACTTTAACCAATCAAATATTTTCTTTGCCTTGCTTC C---------------------GCGNTCACCCTATAAAAGTCTTCCCCTCATGCCCCT-- ----TCAGTGGAG-CCCTGA--ACCACTTGTAGTCT-----GGNGCTGCCCGATTCATGA ATCGCT-GTCTGCTCAAATAAACTCTTTAAAATTTTAATG-TGCCTAAGTTTATCTTTTA ACA--------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER57E2_ERV1_Eutheria ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ TGTTAA-AATAATTAAATGGG-------AGGCCATTAGACTGAGGTGGCTCTAACGCCCT GGGT------TCCTACGTAAGCA-AACC-GAAACCTAACTCAAATGCATTTCTTNTAAGT NACTACCTTAGGAGGAAACGAAAC----------TTAAGCTC--AGCCAATCACAAGCNG CCAACTGGGCATTAGTTAT----ATTATCANGAACTTCCCAC---------CGGGATAGT CCAAATAAGGCAA---CTGCTCAAACTTTAACCAATCAAATAATTTNTTTGCTCTGCTTC C---------------------GCATTCACCCTATAAAAGCCTTCCCTTCANGCCCCT-- ----CCGGTGGAG-CCCCGA--ACCACTTCCGGTTT-----GGNGCTGCCCGATTCATGA ATCGCT-GTCTGCTCAAATAAACTCTTTAAAATTTTAATG-TGCCTAAGTTTATCTTTTA ACA--------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER57E3_ERV1_Eutheria ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --TGAGACCCTGCTTGCGACACATGTGAAAAACGCAGGGGAAAATCAGTCCCCTGTGGAG TGTGAA-AATAATTAAATAGC-------AGGCAATTAGACTGAGGTGGCTCTAGTGCCCT GGGT------TCCTACTTAAAAA-AA-----AATCTAACTCGAATGCATTTTTTGTAAAT TACTACATTAGGGGAAAACAAAAT----------TCAGGCTT--AACCAACCATAAACCG CCAATTAACCTCTGATTAC----ATAACCAGGAAATTTCCAC---------CTGGATAGT ACAAATAAAGAAA---CTACGT-AACTGTACCTAACCAATTATTGAATTTGGTTTGCTTC C---------------------TCACGCACCTTATAAAAGCCTTTCCTTCAAGCCCCT-- ----CCCATGGAC-CACAAACTACAAACCATAGCTG-----GGTGCTCTACGATTCATGA ATCGCT-GT----TCGATTAAATTCTTTAATATTTTTACGGTGACTCCCATAAATTTTTA ACAGGAGAAAGGAGGGACTGGGGACCCCACGGACCA------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER57F_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------TGTTAAAGTAAATTAAAATGGAGACCGGG CCTGAAGAATCCCTGAGCAGACA----AAGCCAGTTAGGCCTCGTAAGTGACCTTAACCT TGCT------TGATTTGCAAACATAAGC-GAAACTTAACTTGAGC-TATTTCTTGTAAAT GCCTATATTAAAGAAAAACGGAAC----------TTAAGCTC--AACCAATCAGAAGCAG CCAACAAACTTATAATTAT----ATAACTAGGGACTTTCCAA---------CGGGATAGA CCAAATAAGGCAA---CTGTAT-AACTGTAACCAATCAAATATTTTCTTTGCTTTACTTC C---------------------GCGTTCGTCCTATAAAAGCCTCCCCCTCGCGTTCCC-- ----TCGGTGGAG-CTCCCGA-ACCGCTTCTGGTTT-----GGAGCTGCCCGATTCATGA ATCGCT-GTTTGCTCAAATAAACTCTTTAAAATTTTATTG-TGCCTCAGTTTACTTTTTA ACA--------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER57B1_ERV1_Eutheria ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------TGTTAAATCAAGT--------TTA GCCTAAAGCTGCCTCCTTACAT---------------------ATTTTAAGTT-CGGCCT AAAG------GTTTCTCTGTACATCGT--GAACTATAACCTAAATGGAGGTGTAAACAGA CTGTAGCCTACTCTTGTGCCAATCA---------CCGAGTTT-TGGCCAATCAAAGGTGG CCAACTGTTCAAACC-----------------------------------------GTGT TCAAATAAGGCAA---ACGCCG-AGCTGTAACCAATCCGGCTGTTTCTGTACCTCACTTC CGTTTTCTGTACGTCACTTTCCTTTTTCTGTCCATAAATCTTCTTCCACCACGTGGCT-- ----GCGCTGGAGTCTCT--GAGCCTACTCTGGCTCGG---GAGGCTGCCCGATTCGCGA ATCGTT-CTTTGCTCAATTAAACTCTNTTAAATTTAATTC-GGCTAAGGTTTTTCTTTTA ACA--------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER57B2_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------TGTTAAATTAAGT--------TTA GCCTAAAGCTGCCTCCTTACAT---------------------ATTTTAAGTT-CGGCCT AAAG------GTTTCTCCGTACATAGT--GAACCGTAACCTAACTGGATGTGTAAACAGA CCGTAACCTACTCTTGTACCAATCA---------CCGAGTTT-CGGCCAATCACAGGCGG CCAACTGTTCAAACC-----------------------------------------GTGT TCAAATAAGGCAA---ACGCCG-AGCTGTAACCAATCCGGCTGTTTCTGTACCTCACTTC CGTTTTCTGTACGTCGCTTTCCTTTTTCTGTCCATAAATCTTCTCCGACCACGCGGCA-- ----GCCCCGGAGTCTCTCTGAACCTATTCTGGTTCCG---GGGGCTGCCCGATTCGCGA ATCGTT-CTTTGCTCAATTAAACTCTGTTAAATTTAATTT-GTCTAAAGTTTTTCTTTTA ACA--------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER57C2_ERV1_Eutheria ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------TGTTAAATTAAATTAAAT--------TTG GCCTAAAGCTGCCTCCGTACTTT----GA------ATCCCTACATAGCGAACTGCAACCT AANT------TAGTATGTAAACAAACT--GCAACCTAACTTAAGAGTATATTCTTGTAAC AAATAGCTGAGTCTCA-GCCAATCACAG---CAGCCGAGCTT-CAGCCAATCACAGGCTG CCAACTGATCAGACCATGTCCATATAAGGCAAATGCCTCATC---------ACACCATGC CCAAATAAGGCAA---ATGCTG-AGCTGTAACCAATCAAGCTGTTTCTGTACGTCACTTC C---------------------TTTTTCTGTCTATAAATACTGCCTGCCCACGTTGC--- ----TGGGTGGAG-CTCTCTGAACCTCTCCTGGTTCTG---AGTGCTGCCCGATTCATGA ATCGTT-CTTTGCTCAAATAAACTCTGCTAAATTTAATTT-GTCTAAAGTTTTTCTTTTA ACA--------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER57C1_ERV1_Eutheria ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------TGTTAAATTAAAT--------TTG GCCTAAAGCTGCCTCCGTAC-----------------------ATAGCAAACTGTAACCT AACT------TAATATGTAAACAAACT--GCAACCTAACTTGAGAGTATATTCTTGTAAC AAGTAGCCGAGTCTCG-GCCAATCATAG---CAGCTGAGCTTTCAGCCAATCACAGGCTG CAAACTGCTCAGAC------------------------------------------ATGT CCAAATAAGGCAA---ACGCCG-AGCTGTAACCAATCAGGCTATTTCTGTATGTCACTTC C---------------------TTTTTCTGTCTATAAATACTGCCTGCCCACATTGC--- ----TGGGTGGAG-CTCTCTGAACCTTTACTGGTTCAG---GGTGCTGCCCGATTCATGA ATCGTTTCTTTGCTCAAATAAACTCTGCTAAATTTAATTT-GTCTAAAGTTTTTCTTTTA ACA--------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER57D_ERV1_Eutheria ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------TGTTAAATTAAATAAGCAGGAGGCCATTA GCCTGAGGCTGTCTCCGTACTTT----GA------GTTCCTACATAACAAACTGCAACCT AACT------TAGTATGTAAACAAACC--GAAACCTAACTTAGGAGTATATT-TTGTAAC AAATAGCCGGGTTTCA-GCCAATCACAAG-ACAGCTGAGCTT-CAGCCAATCACAGGCAG CCAACTGATCACACC-----------------------------------------ATGC CCAAATAAGGCAG---ACGCCT-AGCTGTAGCCAATCAGGTGATTTCTCTACTTTGCTTC C---------------------GTGTTCGGCCTATAAAAGCTCACTGCTCACACTGC--- ----TGGGCGGAG-CTCTCTGAACCTCTTCTGGTTCTG---AGTGCTGCCTGATTCATGA ATCGTT-CTTTGCTCAAATAAACTCTGTTAAATTTAATTT-GTCTAAAGTTTTTCTTTTA ACA--------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER57A1_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------TGTTAAAGCGAACTAAAT--------ACG GCCTGAGAAGGACTCCGTACTTC----TATATTTGAGTCCTTGTGGACGAACCGTAACCT AGCT------TAATAGGCAGACAAGATTGAAAACCTAACTTAGGAGTATGCGCCTGTAAC AA-TAGCTGAGTCTTG-GCCAATCCCAG---CGGCCATACTT-CAACCACTCATAGACTG CCGAGCGTTCAAACT-----------------------------------------GTGT TCAAATAAGGCAA---ACGCCG-ACCCGTAACCAATCCAGCCGTTTCTGTACCTCACTTC CGATTTCTGTACGTCACTTCCCTTTTTTTGTCTATAAATTTGTTCTGACCACGAGGCA-- ----TCCCTGGAGTCTCTCTGAATCTGCTGTGATTCTG---GGGGCTGCCCGATTCGCGA ATCGTT-CATTGCTCAATTAAACTCCTTTAAATTTAATTC-GGCTGAAGTTTTTCTTTTA ACA--------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR10B_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----------------TGTTAAATACAGTAAGA-----------AATTCTTCTTCAAAA GTTTAGCCTGCTTAAGTTT--------------CCTTGTCCTTTGTTTCC---------- ------TGCTTTCAAGGCCAGACTTCCT-TACTCTCTG-------TGTTTCCCCTACCCT GGTAAACAACCTTCCTGCCAGTCC------TTACCCATACAGCCCACATT---CCACATC TG-CTACCCACTCTGTGATTTACCTCTCCCGTCG-CAATAGCCTCTCCC------ACCA- AAACTGATCTT------------------CCCGCCTTCCCACC-------AGTGCAAC-C ACATTCCTGCACTTTGCA-AGTTAGCCAACCGGG-T-----TCGGATTGTGCAGTCCAAC TCCAGC-CAATGGAGTCAGGACACAGTAGCAGGGACAAGC---TGCGTTAGACATAAAAA CCTC-TGCTTTCCTTTGTTTAG-GGTGCTCTCGTG-GC---AACCAGACTTACCAGG-AG CTCTATTCTGC--AAAAGTA-----AATTTGCCTTGCTGAGAG----------------- -----------------------------ACCCTTTGTCCTTTGGCTCAGTGTTGGTTCT TCTTTGCAGCACCGA---GCATTTGTTTCCAACA-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR10B1_ERV1_Primates ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----------------TGTCAGATACAGTAAG--------------TTCCTCTTCAAAG GTTTAACTTGCTCAA-CTT--------------CCTTGTTCTTTGTTCTTAAGACCAACT TCCTTGTACTCTCTTGCCCCTAGCTACC-TGCTCTGTAAACAACTTCTCCCGCCAGTCCC AATCTGTAACTCACAT-CTCTTCC------TTACTTGGAAAGAGTCCTCT---TTACTCC TGGCTACCCATTCTGTAAACAACCCTCCTTCCCG-CCTTTGCCGCGCCCTGACATGCCC- AGACATGCCTTGTACTGTAACGGACAGCCTCTCCCTTCCCACC-------TAGNTAGC-C ATATTCA---ATTTTAAA-CAGTAGCCAATCGGG-TC-AGCTTAGATTGTGCGGTCCGAC TCCAGC-CAATGGGGANAGGACACAGAAGCAGGGACTAAC---TGCGTTAGGGATAAAAA CCCC-TTCCCTCCTTCGTTCGG-TGTGCTCTCGCA-GC---AGCCAGAAATGCGAGC-AG CACCCTTCTGC--AGAAGTA-----AATTTGCCTTGCTGAGAA----------------- -----------------------------ATCTTTTGTT-------TGAGTGCTNGTTCT TCTTTGCGGCWCCGA---GCTCTTGTTTCCAACA-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR10G_ERV1_Eutheria ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----------------TGTAAGATACAATGAATTT----CTCTGAGTTTCTCTTCAAAG ATTTAGCCTGCTAA--CTT--------------CCTTGTCCTTTGTTCTCAAACTCAACT TTCTTGTTCCTCCTTGCCCCTAGTTACTGTAAAACAGCCTACCCCCTTCCCATCAGCTCT AATCAATAACTCACATCTGTTCCC------TTGGTTA---------------------CC TG--CACCCATTGTTCCCCCGAAACTGCACGTCT-CACATGCTTCACC-------ACTG- TACCTCACRTC----------------CCCCTTCCCTTCCATA-------TTTAGAAA-A ATATT---------TGCA-AG-TAGCCAATCGGG-TC-AGCTCAGATTGTGCAGTCCGAC CCCAGC-CCATGGGGGAGTGACACAGAGGTAGGGACTA-----CGCGTCAGAGATAAAAA CCCCCTGCTCTCCTTTGTTCCG-TGTGCTCTTGCG-AT---CTTGATTGACGCGAGT-GG CACCCTTCTGC--AGAAGTA-----AATT-GCCTTGCTGAGAA----------------- -----------------------------AACTTTTGCC-------TGAGTGCTGGTTTC ACTTTGCGGCACCAA---GCATTTATTCCTAGAGCATTTTTATATCCAACA--------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR10F_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----------------TGTTAAATA---TGAATT-------CTAAATTTCTCTTCAAAG AATTAATATGTCAGTATGTTCAA--------TTCTTTGCCTTCTACTTTTAAACTTAACT TC--CTCGTAAAGCAACC----------TTTTCCGATT-------------ACCTGCTCC ACCCTG--------ACTCATTCC---------GATTACCTGCTCCACCCTGACTCATTCC GA-TTACCTACC----ACCTGCTCCACCCTGACT-CATTCATTCT--------CCACCC- TGCATAACCAT------------------TTTTTTTTCCCGCC-------AAACCA-CTC ACCCCGTCACTCTCTTTA-AATTAGTCAATCGGAATT-AGTTTAGCCTGTGCGGTCTAAC CCTAGC-CAATAGGGGAATGACACAGCAGTAGGGACCACG---TGCATCAGGAATAAGAA CCCCTTTCCCTCCCTTGTCCAGGTGTGCGCTCACC-AT---TGCTCCATCTGTGAGGGTG CACCCTTCTAT--AGAAGTA-----CC-TTGCCTTGCTGAGAA----------------- ---------------------TTAAAAAGAAAATT----TTATATTCGAGTGCTATTTCT --TTTGCGGCACCGA---AACTTTATATATAACA-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR10A_ERV1_Eutheria ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----------------TGTTAAGTACGGTGAGTT-------CTGAGATCCTCTCCAAAG AACCAGTATGTCAGTATGTTCAGCTCNCCTGTTCTTTGTTCTCCATTTTAAAGTTTAACT TCAGTATGTTCAGCTCNCCTGTTCTTTGTTCTCCATTTTAAAGTTTAACTCAACAGTTCT AATCAGTAGTTAACGCCTGTTCCC------CTGGTCACCTGCTCCATCCTGACTCATCCC GGGTCACCTGCTTTG-ACCTGAGTCACCCTTAGT-CACCTGCTCTGTAA----CCATCC- TTCCCGCCAAA------------------CTACTCACCCCGCC-------ACTCTGGCTC ATACCCCTGCTCTCTTTA-AAATAGCCAATCGGAATT-AGCTTAGACTGTGCGGTCCAAC CCTAGC-CAATAGGGGAACGACACAGCAGTAGGGGCTACC---TGCATCAGGAATAAGAA CCCCTTCCCCTCCCTTGTCCAGGTGTGCTCTCGCC-AT---TGCTCCATCTGCGAGA-CG CACCCTTCTAT--AGAAGTA-----AAATTGCCTTGCTGAGAAAATTAAATTTATGTTTG AGTGCTATTTCTTTTGCGGCACCGAAACGAAAATTAAATTTATGTTTGAGTGCTATTTCT --TTTGCGGCACCGA---AACTTTATTTATAACA-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR10E_ERV1_Eutheria ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------------TGTAGAAAGTAAAA---GGTTTCCTCTTCAAA G-TTTCCCTTCTTGTTAAAGAATAAATCATAAGTGTTAGAAATAATAGTTTCTTTTAAAG ACTAACTTCCTTCAAGCCTCCTT----GCTTTGTGCTAATAACTCTTTGTTAAGCCCTAT CCTATGTAGCTGTTAGACATAAGGGAATAAGTACATTCTATGTCCTTGTACTTTAACCAA GATATTTGTGCTGGACGTGCTCA--------CAGGCATGTCCCAGCTCGCAGCCTATGCC CC--TTCCTTATTTGGRAATATTATTACTTTTCT-AAGTCCTTTCGTAA------GCAA- CTTCCTCTTTTC--------------CTTTGTTCTCCATTGC----------CTTTACCT ATTTAGAAAAGTTTTAAATTATTAGCCARTCGGGTTTTAGTTTAGATTGTGAGGTCTGGC TCCAGC-CAATGGAGACAGGACACAGTAGCAGGGACAAAC---TGCGTAAGGGATAAAAA TTGC-TTCCCTCCTTTGTTCAGGTGTGCTCTTGCC-AT---TGTTCCATCTGCGAGG-AG CACCCTTTCTGCAGAAAGTA-----AAATTGCCTTGCTGAGAA----------------- ------------------------AATTAAATTTTTGTC-------TGARTGCTAATTTT TCTTTGCAGCACCGAGGAACAAGCATTCTGTTTCTAAATAAACATTTTACWTATAACA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR10C_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------------TGTAAAAAGTAAAGTAGAGGTTCCTCTTCAAA GACTTTCCTCCCCATCTAATTAGGAAT------------AAATAGTAACTTCTCTTAAAA GCAAAATTTATTCAAA-----------GACCTGTGCTAACA-TTCTTAAATATCTGCTAG CCATAATAA-----AGAAATCAATGTACTT-TATATTCTTAGCTCCCACAATTTAGCCTA AATATTTGCCCTGG-CATGCTTATACTAGTCCAAGCAAGCATTAGGTCATAGCCTGTTCC TC--TTCCTTATTTGAAGGTGTTTTTACCTTTCT-CAG-CATTCCACAA------GTTA- CTTCCTCCTT-C--------------CTTTGTTCTCCTCTGC----------CTTTGCCT CTTTTAAAAAGTTCTAAGTTGCTAGCCAATCAGGACA-AATACAGAATGTGAGGTCCTGT TCCAGC-CAATAGAAACTGGACACAGCAGTAGGGTGGA-----CGCGTCAGGTTATAAAT GACC-CTGTCTCCTTTGTTCAG-TGTACTCTCATG-GC---AAAACTGCTGGTGAGT--G TACCCTTTCTGCAGAAAGTATA--AAWATGGCCTTGCTGAGAA----------------- ------------------------AATTAAATTTATGTT-------CAAGTGCTA---TT TCTTTACAGCACC-----ACAAGCATTTCAAACA-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR10D_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------------------------------------------TGTGGGATATGATGAGG TT----TCTCTTCAAA---------------TAACCTGATCAATCTTTTAT-TCTTTAAT TCATAGTACCCCCCTCCCTYCTTTTTTCYTTTTTCTCCTTTTTTCCT---TTTTGCCTTT GTTAGATGCCCAGG-CACGC-CACAGTA--CCAGGCGTTATCAATACCAGCTCACATTCC T---TTCCTTATTTGGAAAAAAGACTAACTTTCT-AGCTCATTACAGAC------ACCC- CTTCCCCTTTCCT-------------CTCCGCTTTCTTTTACG-------TGCCCACCTT ATCTAAAAAAAAATCAAATGTTTAGCCAACCGGGATT-AGTTTAGATTGTATGACCCAAC CCCAGC-CAATGGGGAAAGGGTACAAGGGCAGGACT-------TGCATCARAAATAAAGG CTCT-CGTGCCCCTTTGTTCAGGTGTGCTCTCATG-GC----GACTGGCCAAGGAGA-AG CACCCCTCTGCGCAGAAGTA-----AAATTGCTTTGCTAAGA------------------ -----------------------------ATCCTTTGTT-------CGAGTGTTCAA-TT TCCTTAGGATTTTG----AGCGTTATTCCTAACA-------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >PABL_B_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------TGTGGCAGGCCAGGTCTCACTAACAGCTGAACAGGCAGGCCTCCATGACA ACTGTTTCAGCACTGACTG-----------AGTGGTTAAGTTAAATATTAAAAGCTGANA GAGCCAGTGCCCTTATACAAAGGCTGGAATGTAACAAAAGCCCACCAAGAGTTTTGCCTA GGCCTTTCCTGGGCCTTGAAGCATGA----CAAGATAACGAAGGAATTCTTAACAGGACC CG-TTTAGGATTAAACAAGTTTTATTGGGGGTCTGAAGAAACTCCCCAGACCTCCACAAA CAAGTTTTATTGGGGGTCTAAAGGAACTCCCCAAACCTCCATG-------ATTTAGCAGG AGACAAGATAAGGGTAATCACCCCGGCACCTGGACCC--ATTTAGATTAAGTAAATTTAC TGAGGCTCCAGAGGAAGGTCTTACAGGACTCAGACCTTAGTTATAGATTAGAAG---TTA ATCACTTATGTCTTTAGATGAA-TGCACACTTACACGT---AGACATATAGCTTAGAAGG TATATAAGCTCTGGAAAACTTTGTAATTTTGAGTTGGTCTGGTGATATTTTCCCGGCCTT CTCCCTGTAACCGGTTACAGAAATAAA--CTCTCTTCTTTCCCAGTTCATCTGCATCTCG TTATTGGGCCACGAG--AATAAGCAGCCCGACCCTCGGTTTGGTCCGGGAACA------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >PABL_A_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------TGTGGCAGGCCAGGTCTCACTAACA----------CAGGCCTCCATAACA ACTGTTTCAGCACTGACTG-----------AGTGGTTAAGTTAAATATTAAAAGCTGANA GAGCCAGTGCCCTTATACAAAGGCTGGAATGTAACAAAAGCCCACCAAGAGTTTTGCCTA GGCCTTTCCTGGGCCTTGAAGCATGA----CAAAATAACGAAGGAATTCTTAACAGGACC CG-TTTAGGATTAAACAAGTTTTACTGGGGGTCTGAAGAAACTCCCCAGGCCTCCACAAA CAAGTTT-ATTGGGGGTCTGAAGGAACTCCCCAAACCTCCGTG-------ATTTAGCAGG AGACAAGATAAGGGTAATCACCCCAGCACCTGGACCC--ATTTAGATTAAGTAAATTTAC TGAGGCTCCAGAGGAAGGTCTT-CAGGACTCAGACCTTAGTTATAGATTAGAAGAAGTTA ATCACTTATGTCTTTAGATGAA-TGCACACTTACACGT---AGACATATAGCTTAGAAGG TATATAAGCTCTGGAAAACTTTGTAATTTTGAGTTGGTCTGGTGATAATTTCCAGGCCTT CTCCCTGTAACCGGTTACAGAAATAAAAACTCTCTTCCTCCCCAGTTCATCTGCATCTCG TTATTGGGCCACGAG--AAATAGCAGCCCGACCCTCAGTTTGGTCCGGGAACA------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR17_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -TGAGAGACAGGACTAGCTGGATTTCCTAGGCCGACTAAGAATCCCTAAGCCTAGCTGGG AAGGTGACCGCTTCCACCTTTAAACACGGGGCTTGCAACTTAGCTCACACCCGACCAATC AGGTAGTAAAGAGAGCTCACTAAAATGCTAATTAGGCAAAAACAGGAGGTAAAGAAATAG CCAATCATCTATCGCCTGAGAGCACAGCGGGAGGGACAATGATCGGGATATAAACCCAGG CATTCGAGCCGGCAACGGCTACCCTCTTTGGGTCCCCTCCCTTTGTATGGGAGCTCTGTT TTCACTCTATTAAATCTTGCAACTGCACTCTTCTGGTCCGTGTTTGTTACGGCTCGAGCT GAGCTTTCGCTCACCGTCCACCACTGCTGTTTGCCGCCGTCGCAGACCCGCCGCTGACTT CCATCCCTCCGGATCCGGCAGGGTGTCCGCTGTGCTCCTGATCC------AGCGAGGCGC CCATTGCCGCTCCCGATCGGGCTAAAGGCTTGCCATTGTTCCTGCACGGCTAAGTGCCTG GGTTCGTCCTAATCGAGCTGAACACTAGTCACTGGGTTCCACGGTTCTCTTCCGTGACCC ACGGCTTCTAATAGAGCTATAACACTCACCGCATGGCC---CAAGATTCCATTCCTTGGA ATCCGTGAGGCCAAGAACCCCAGGTCAGAGAACACGAGGCTTGCCACCATCTTGGAAGTG GCCCGCCGCCATTTTGGAAGCGGCCCGCCACCATCTTGGGAGCTCTGGGAGCAAGGAACC CCCGGTAACA-------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR30_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -----------------------------TGAGAGGAGGTKCCAGCTGGGCTTCCTGGGT CGAGTAGGGGCTCAGAAAGCTGTGAAACTCACTCATTTCCTGCATCAGGACTTACTTCGG TCCTGGATGAATAATATTGAAGATATATGCTTAAAATATTCCTAACAYCAGGATTTGTGC ATGTGTTTTCTTCCCCAAGAAAGCTATAAACAGCAAAAATTTTGCTGTAAGCTTCCCTGT GTCCTTCTCTCCCTCTCTCCCTTCCCCCTCCCCTAAAACTAAAGTAAAAGGAATGTTAAA AGCCCATTATTTTCTGTGACCAGCAGACCTTATCTATGCTCCCAATTCCAATTCCTTGTA AACACACTTTGTAAARTCCTGTRAGATCCTGTCTCCTTTGCCAT------GCCGCTGCAA GGTYATAAAGTAGATAAAACYTAAGTTRCAATTCCGGTTTTCCTCAAGATCTAAGACATG TCMCAAAATAATTTACTGYCTTTGTTTCTTGCTCTGGTAACATCTTCCCGCCGCACGTAT TTCCCGCCTTAAAGAGTTTAAAAGGCGATCAAACAAATCTAACACTGGCTACCCGCTCGG GACCCCTTCCACGCTGTGGAAGCTTTGTACTGTCACTCTGCTCAATAAAGCCTACAGCTT TTTTTCTCTCTTGGTCCGATCCGTGTCTCTCWCTCGCCGCGGGCWGCCGCCACACCAAAT CTTTGGCGTGGCTAAGGCAAGAACCTTTGGCGTTACA----------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR46_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ --------------------------------TGTTAGTCCAAACTGCACCATTTTGTAA GCTCCCTGCTATTTTGCAGACCTTGGTCAAAGTGAAACATTCCATGGGGGTTCRGGCCGT GAGAAA------CATCCTGCCTAACCACCTGACNACAAGGCGGACAAAGGCCCACTGAAG AAACATCCCTATCATA-------TCNTGCTGGGCAAAGATCCAAGGAACACCACGATCAC ATYCTNCTGGAANAAGGGCCAGAACTGCCTCATCATAGGAACAT------CTTATCAATA TCCTGCCGGGCAGCAAGCCATACTGCCCAGACCCCTCCCACCCAGACCTATAAATTGCCC CAGCCTGTAAGCAGTGGTGGGCTC--TGGCATTAAGCTGGTCCCCCACYTYYRCAGGTTT TNTGCTGGATATAAAACCTGCATTTGCTGTAGAGCTGC-----CCTCTCTCTCTCTCTGT GTCTTTCTTTAACCCTCACCTTCCCTTCAAAACCTAACA--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR19A_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------TGACAGAGCAGGAGCATCGCCATCTTGGAC AAGCACTGCCATTTTAAAGTTCCCCTTGATCAAAAACCGCCTAAATCCAACCCAAAGGGC ATCAGCC--TAATGGCTAAKGTCAGCATGACCATAAACCACAAATGACATCTCCGACCAG AAACATTCCAACCCTAAGATAAACCCCTCCCYRACCAGAGACATGCCAGCCCCGAGATAA CCTCCCCTCCGGCCAGAGAGATGTCAGCCCCAASATAACCTCCCCTTCAACCAGAGACAT TCCAACCCCACAATAAACTTCTCCCCCACACAGAAACATTCCAAGCCTGTGATAAAGCTC TCTCACCCTAAAACCCTTAAATACTCTTAGTCTGTAAGAGAGAGTGCTCCTGACTGAAAT CGGCCAGAAGCCCCTCTCAGGTTTATTCTCCAAAATAA---ACCTGTCTTTGACTGTTGA GCCGCTTTTCRTGTTTCTTTCCTCTTTCTTTAACTCTTACA------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR21B_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------TGTTAGGGTCRCCCY RAYCAGACYRYTCCCTTCCCCTCCCACAGGMCTTACAATAYRGTCCYTTGYRCTCTCCGC ACAGCTACCCCAGGGCAAAARACAAAYCCCCCTTCACTGAYCCYTCCAGTAACTGTSCRG ACAGTTACAGGATGCGGTYAACATRTCTGTTCACCTCGCATAACAAAGCTGGCAAAAAAA CATCTCCAGGATGCRGACAAGWCACYTGCACCCYYGACTCACTCAGCTCCCCSACCCYRA CCCAGTTCT-CCTGCACCCCCAACTCAGCTCCCGCACCCCGACCTRGTTCTGGCCCTATA AAARCCTGCTATWGTCTGTAAGYRGGKCTGCCTCCTYYAACTGTGGTRGAGCAGCCAAGC AGCTCAATAAAGCTTGCTTGCCTGACTTTGGGTCTCYTCATCCTTTCTCTCGGCTGACCT TACA-------------------------------------------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >LTR21A_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ----------------------TGTTAGGGACAAACTGCCCCCAAGAAAGCTTCTTGGTG CTGCCCACCCCTCCCCGCAAACCTCTCCGCGCTGCCCACCCTTCCCCCAAGCCTYTTTAC ATTTCTAAGCCCTTATCTAGGCACCACGGTGAAGCCAGCCTGATAGAAGACTTYACYTAT CAGRCCTTGCTGCAATAAAGCAAACCCCAATTACAAACCATCCGGACCGCACAGGGGGAG GTCGTGGGAARCATAAACAAACTTTACCTACACCCTCCNGTAC-----------CGTAAA CGTCACAAGGTGATATGTGGCARAATTAACCAGCAAACAACCCCGGGATGCRGCCATACC AAAGRACTCCCTCAAACTCCCTKCCCCAATRTAAACCCCTCATTCTGTAAGCTTGGGGCT GCTTYCCTTGACTGTKAWGGGGGCAGCCGRCAGGTTAATAAARGCTTGCCTGAACTTGGG GCTCTCTCTCTYTGGTCCTTTCTCTCGGCTRACCTTACATTCTCACTCTCTAAGTTCA-- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER48_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ---------------------------------------------TGWAAGATTCTCCCC RGGGCCTGAAAGCTTRAGGGGATGARTAACCCCTCCCTTCCTCAGGCCCAGTCCCAAGGC GCAAGGTCACTTGTGCCAGCAGTGTGCGCCAGCAAGATAGCAGAAGCAGGAAGAGAGCCG GCCGGAAGACACGTACCCCCGAAGATCGAGAAAGAGGCCATCC-----------GGGTAC AACGTAGCAGTTACGTCAGACTGGGACACTTCCTGTTTACAGGAGACTATAAAACCYYTG CCCCGTCCTCACTTGGGGCTGA----CGCCATTTTAGGCCTCAGCCCGCCTGCACTCAGG CAGCACCCAGGCGCTCATTAAAACAGCGTGTTGCTCCACACCTCCTCGTGTTGTTGTGGA CGCGCTCTCGGGGTTSGAACCGAYACAAGARCCTTACA---------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ - >MER84_ERV1_Homo ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -------TGAGGAGAGCAAAGACCACCTGGTGACCATCAAACAGGCCATCCGGAGGCAAA ACTCCTTATCTGGGGAATTTAGA-AGTAATTAGACTTCCCTATTATCTAAAGCAGGCATC TGGTTCCAGGCCTCTTTCCCNNAAAAACTTATAAGTAACTAGAATTTCTATACGTCTCCG GAATGCATGCATGCTGA---AACTCACTGTGCAACCCTTGCTGACATCAAGGCACCAAAA TGTCTACAAATGTAATCATTTACCATGACCTACGTGGCTAATATGGTCCAAATTACCCTT AAGCTCCCGCTTTAAGGTCCATAAATGCTCCTAAGGAAAAATCCACCGCGGCGCGCTCAG TCCTCTCTTGCTGAGGCGCCCCGCTGCACTCTKCTGCAGCGTTCTTTCTGTCTAATAAAA CTTTCCTTTTTCAAACCTATACTGTTGTCGGTAAATTCTTTTTACCAACCCACGAGTCGA CCACTTCCCGATGCCGGGGCTCTGACACCTCGCCTGGCA--------------------- ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ ------------------------------------------------------------ -