sitename,chromosome,first,last,reference_delfreq,reference_n0,reference_n1,reference_n2,scimm_delfreq,scimm_n0,scimm_n1,scimm_n2,concordant_samples,total_samples,concordance_rate,ppv_scimm,ppv_reference,consistent_site
chr1:25460715-25539592(McCarroll2008_CNP_28),chr1,25460715,25539592,0.217472119,16,85,168,0.029739777,0,16,253,168,269,0.624535316,1,0.158415842,FALSE
chr1:72523701-72540958(McCarroll2008_CNP_59),chr1,72523701,72540958,0.083643123,1,43,225,0.081784387,1,42,226,268,269,0.996282528,1,0.977272727,TRUE
chr1:108530758-108544019(McCarroll2008_CNP_84),chr1,108530758,108544019,0.252808989,23,89,155,0.252788104,23,90,156,265,267,0.992509363,0.991071429,0.991071429,TRUE
chr1:111174088-111194749(McCarroll2008_CNP_91),chr1,111174088,111194749,0.119402985,6,52,210,0.117100372,6,51,212,267,268,0.996268657,1,0.982758621,TRUE
chr1:151023547-151040324(McCarroll2008_CNP_110),chr1,151023547,151040324,0.165427509,10,69,190,0.165427509,10,69,190,269,269,1,1,1,TRUE
chr1:167495598-167513390(McCarroll2008_CNP_122),chr1,167495598,167513390,0.163568773,7,74,188,0.163568773,7,74,188,269,269,1,1,1,TRUE
chr1:173058179-173073463(McCarroll2008_CNP_124),chr1,173058179,173073463,0.163568773,12,64,193,0.163568773,12,64,193,269,269,1,1,1,TRUE
chr1:194992658-195073695(McCarroll2008_CNP_147),chr1,194992658,195073695,0.296992481,34,90,142,0.068773234,0,37,232,144,266,0.541353383,1,0.290322581,FALSE
chr1:246810817-246868836(McCarroll2008_CNP_182),chr1,246810817,246868836,0.199626866,14,79,175,0.198884758,14,79,176,268,268,1,1,1,TRUE
chr1:246928867-246944281(McCarroll2008_CNP_183),chr1,246928867,246944281,0.126865672,12,44,212,0.126394052,12,44,213,268,268,1,1,1,TRUE
chr2:4186739-4206042(McCarroll2008_CNP_186),chr2,4186739,4206042,0.070895522,2,34,232,0.07063197,2,34,233,268,268,1,1,1,TRUE
chr2:34547823-34595561(McCarroll2008_CNP_207),chr2,34547823,34595561,0.13619403,16,41,211,0.137546468,16,42,211,268,268,1,1,1,TRUE
chr2:35826294-35846451(McCarroll2008_CNP_211),chr2,35826294,35846451,0.498134328,68,131,69,0.496282528,68,131,70,268,268,1,1,1,TRUE
chr2:41086947-41104391(McCarroll2008_CNP_216),chr2,41086947,41104391,0.104477612,5,46,217,0.102230483,5,45,219,267,268,0.996268657,1,0.980392157,TRUE
chr2:49384272-49399694(McCarroll2008_CNP_221),chr2,49384272,49399694,0.069029851,2,33,233,0.072490706,2,35,232,267,268,0.996268657,0.972222222,1,TRUE
chr2:52600074-52640046(McCarroll2008_CNP_223),chr2,52600074,52640046,0.350746269,50,88,130,0.349442379,50,88,131,268,268,1,1,1,TRUE
chr2:89631367-89917071(McCarroll2008_CNP_257),chr2,89631367,89917071,0.066287879,3,29,232,0.07063197,3,32,234,261,264,0.988636364,0.939393939,0.96875,FALSE
chr2:123187888-123203711(McCarroll2008_CNP_279),chr2,123187888,123203711,0.164794007,14,60,193,0.165427509,14,61,194,267,267,1,1,1,TRUE
chr2:129349948-129361767(McCarroll2008_CNP_284),chr2,129349948,129361767,0.149253731,10,60,198,0.148698885,10,60,199,268,268,1,1,1,TRUE
chr2:130505353-130544705(McCarroll2008_CNP_287),chr2,130505353,130544705,0.653846154,112,99,36,0.018587361,1,8,260,37,247,0.149797571,0.888888889,0.037914692,FALSE
chr2:180121456-180135382(McCarroll2008_CNP_320),chr2,180121456,180135382,0.078651685,1,40,226,0.078066914,1,40,228,267,267,1,1,1,TRUE
chr2:202999020-203025446(McCarroll2008_CNP_332),chr2,202999020,203025446,0.070895522,1,36,231,0.07063197,1,36,232,268,268,1,1,1,TRUE
chr2:208058423-208072581(McCarroll2008_CNP_337),chr2,208058423,208072581,0.071428571,5,28,233,0.076208178,5,31,233,264,266,0.992481203,0.942857143,1,TRUE
chr3:46771821-46829285(McCarroll2008_CNP_406),chr3,46771821,46829285,0.18401487,24,51,194,0.18401487,24,51,194,269,269,1,1,1,TRUE
chr3:84777483-84789826(McCarroll2008_CNP_437),chr3,84777483,84789826,0.128731343,8,53,207,0.133828996,8,56,205,266,268,0.992537313,0.968253968,1,TRUE
chr3:100422148-100437111(McCarroll2008_CNP_451),chr3,100422148,100437111,0.085501859,6,34,229,0.085501859,6,34,229,269,269,1,1,1,TRUE
chr3:116138282-116156640(McCarroll2008_CNP_458),chr3,116138282,116156640,0.132462687,13,45,210,0.13197026,13,45,211,268,268,1,1,1,TRUE
chr3:163694323-163714653(McCarroll2008_CNP_504),chr3,163694323,163714653,0.059479554,5,22,242,0.059479554,5,22,242,269,269,1,1,1,TRUE
chr3:163990351-164111575(McCarroll2008_CNP_505),chr3,163990351,164111575,0.585501859,104,107,58,0.585501859,104,107,58,269,269,1,1,1,TRUE
chr3:190841372-190852332(McCarroll2008_CNP_530),chr3,190841372,190852332,0.20260223,12,85,172,0.20260223,12,85,172,269,269,1,1,1,TRUE
chr4:9818254-9849366(McCarroll2008_CNP_554),chr4,9818254,9849366,0.580223881,91,129,48,0.579925651,91,130,48,268,268,1,1,1,TRUE
chr4:9996452-10014766(McCarroll2008_CNP_555),chr4,9996452,10014766,0.121268657,8,49,211,0.120817844,8,49,212,268,268,1,1,1,TRUE
chr4:20976137-20990949(McCarroll2008_CNP_565),chr4,20976137,20990949,0.184701493,19,61,188,0.18401487,19,61,189,268,268,1,1,1,TRUE
chr4:34450420-34505578(McCarroll2008_CNP_575),chr4,34450420,34505578,0.166044776,10,69,189,0.167286245,10,70,189,267,268,0.996268657,0.9875,1,TRUE
chr4:63347531-63359257(McCarroll2008_CNP_596),chr4,63347531,63359257,0.216730038,18,78,167,0.223048327,20,80,169,263,263,1,1,1,TRUE
chr4:64375064-64395818(McCarroll2008_CNP_597),chr4,64375064,64395818,0.160447761,11,64,193,0.156133829,11,62,196,266,268,0.992537313,1,0.973333333,TRUE
chr4:69038083-69173574(McCarroll2008_CNP_603),chr4,69038083,69173574,0.464419476,77,94,96,0.144981413,0,78,191,96,267,0.359550562,1,0.450292398,FALSE
chr4:70157233-70278689(McCarroll2008_CNP_605),chr4,70157233,70278689,0.212686567,14,86,168,0.211895911,14,86,169,268,268,1,1,1,TRUE
chr4:87190118-87203968(McCarroll2008_CNP_620),chr4,87190118,87203968,0.065298507,0,35,233,0.065055762,0,35,234,268,268,1,1,1,TRUE
chr4:115389772-115406624(McCarroll2008_CNP_662),chr4,115389772,115406624,0.399253731,38,138,92,0.397769517,38,138,93,268,268,1,1,1,TRUE
chr4:122496918-122509766(McCarroll2008_CNP_668),chr4,122496918,122509766,0.097014925,3,46,219,0.096654275,3,46,220,268,268,1,1,1,TRUE
chr4:138306645-138317864(McCarroll2008_CNP_682),chr4,138306645,138317864,0.177238806,10,75,183,0.176579926,10,75,184,268,268,1,1,1,TRUE
chr4:152090801-152108748(McCarroll2008_CNP_699),chr4,152090801,152108748,0.083955224,4,37,227,0.083643123,4,37,228,268,268,1,1,1,TRUE
chr4:172606459-172619508(McCarroll2008_CNP_724),chr4,172606459,172619508,0.661596958,134,80,49,0.656133829,134,85,50,263,263,1,1,1,TRUE
chr5:12863780-12884650(McCarroll2008_CNP_758),chr5,12863780,12884650,0.211895911,24,66,179,0.211895911,24,66,179,269,269,1,1,1,TRUE
chr5:140199020-140228940(McCarroll2008_CNP_865),chr5,140199020,140228940,0.055970149,3,24,241,0.053903346,3,23,243,267,268,0.996268657,1,0.962962963,TRUE
chr5:150180693-150203797(McCarroll2008_CNP_874),chr5,150180693,150203797,0.310408922,41,85,143,0.308550186,41,84,144,268,269,0.996282528,1,0.992063492,TRUE
chr5:155404350-155420307(McCarroll2008_CNP_877),chr5,155404350,155420307,0.079925651,7,29,233,0.081784387,7,30,232,268,269,0.996282528,0.972972973,1,TRUE
chr5:180306316-180355709(McCarroll2008_CNP_901),chr5,180306316,180355709,0.262081784,27,87,155,0.258364312,27,85,157,267,269,0.992565056,1,0.98245614,TRUE
chr6:31389255-31409430(McCarroll2008_CNP_930),chr6,31389255,31409430,0.587121212,90,130,44,0.118959108,4,56,209,75,264,0.284090909,1,0.272727273,FALSE
chr6:34041721-34055683(McCarroll2008_CNP_937),chr6,34041721,34055683,0.132958801,5,61,201,0.133828996,5,62,202,267,267,1,1,1,TRUE
chr6:67092634-67104913(McCarroll2008_CNP_960),chr6,67092634,67104913,0.182156134,11,76,182,0.013011152,0,7,262,187,269,0.695167286,1,0.08045977,FALSE
chr6:77491588-77514522(McCarroll2008_CNP_975),chr6,77491588,77514522,0.125,9,49,210,0.120817844,9,47,213,266,268,0.992537313,1,0.965517241,TRUE
chr6:78933170-78960234(McCarroll2008_CNP_976),chr6,78933170,78960234,0.050373134,1,25,242,0.05204461,1,26,242,268,268,1,1,1,TRUE
chr6:79020784-79096904(McCarroll2008_CNP_977),chr6,79020784,79096904,0.128252788,5,59,205,0.128252788,5,59,205,269,269,1,1,1,TRUE
chr6:81336677-81351253(McCarroll2008_CNP_980),chr6,81336677,81351253,0.098513011,6,41,222,0.098513011,6,41,222,269,269,1,1,1,TRUE
chr6:93627587-93640351(McCarroll2008_CNP_986),chr6,93627587,93640351,0.06133829,2,29,238,0.063197026,2,30,237,268,269,0.996282528,0.96875,1,TRUE
chr7:245145-258709(McCarroll2008_CNP_1040),chr7,245145,258709,0.110074627,7,45,216,0.1133829,7,47,215,266,268,0.992537313,0.962962963,1,TRUE
chr7:90864671-90883663(McCarroll2008_CNP_1119),chr7,90864671,90883663,0.057835821,2,27,239,0.057620818,2,27,240,268,268,1,1,1,TRUE
chr7:125827718-125838851(McCarroll2008_CNP_1159),chr7,125827718,125838851,0.556179775,79,139,49,0.557620818,80,140,49,267,267,1,1,1,TRUE
chr7:133430735-133454694(McCarroll2008_CNP_1162),chr7,133430735,133454694,0.266791045,27,89,152,0.267657993,27,90,152,265,268,0.98880597,0.982905983,0.99137931,FALSE
chr7:141411112-141443377(McCarroll2008_CNP_1174),chr7,141411112,141443377,0.106343284,5,47,216,0.105947955,5,47,217,268,268,1,1,1,TRUE
chr8:13654088-13701077(McCarroll2008_CNP_1260),chr8,13654088,13701077,0.059479554,1,30,238,0.059479554,1,30,238,269,269,1,1,1,TRUE
chr8:25025439-25045250(McCarroll2008_CNP_1284),chr8,25025439,25045250,0.207089552,11,89,168,0.206319703,11,89,169,268,268,1,1,1,TRUE
chr8:39349760-39511122(McCarroll2008_CNP_1293),chr8,39349760,39511122,0.224907063,22,77,170,0.224907063,22,77,170,269,269,1,1,1,TRUE
chr8:51189577-51200974(McCarroll2008_CNP_1303),chr8,51189577,51200974,0.145522388,8,62,198,0.148698885,8,64,197,267,268,0.996268657,0.985915493,1,TRUE
chr8:63375105-63391639(McCarroll2008_CNP_1316),chr8,63375105,63391639,0.053903346,1,27,241,0.048327138,1,24,244,266,269,0.988847584,1,0.892857143,FALSE
chr8:72372865-72384153(McCarroll2008_CNP_1324),chr8,72372865,72384153,0.126394052,5,58,206,0.126394052,5,58,206,269,269,1,1,1,TRUE
chr8:75476738-75495149(McCarroll2008_CNP_1326),chr8,75476738,75495149,0.059479554,4,24,241,0.059479554,4,24,241,267,269,0.992565056,0.964285714,0.964285714,TRUE
chr8:115698663-115715907(McCarroll2008_CNP_1346),chr8,115698663,115715907,0.154275093,6,71,192,0.154275093,6,71,192,269,269,1,1,1,TRUE
chr9:23348115-23368484(McCarroll2008_CNP_1416),chr9,23348115,23368484,0.342105263,38,106,122,0.342007435,39,106,124,266,266,1,1,1,TRUE
chr9:43250666-43740571(McCarroll2008_CNP_1434),chr9,43250666,43740571,0.245247148,22,85,156,0.24535316,22,88,159,263,263,1,1,1,TRUE
chr9:137348926-137361233(McCarroll2008_CNP_1529),chr9,137348926,137361233,0.498084291,74,112,75,0.498141264,75,118,76,261,261,1,1,1,TRUE
chr10:20885118-20898540(McCarroll2008_CNP_1558),chr10,20885118,20898540,0.149253731,9,62,197,0.148698885,9,62,198,268,268,1,1,1,TRUE
chr10:58875511-58885997(McCarroll2008_CNP_1610),chr10,58875511,58885997,0.146067416,10,58,199,0.144981413,10,58,201,267,267,1,1,1,TRUE
chr10:66972929-66989452(McCarroll2008_CNP_1620),chr10,66972929,66989452,0.252788104,29,78,162,0.252788104,29,78,162,269,269,1,1,1,TRUE
chr11:7764616-7803159(McCarroll2008_CNP_1682),chr11,7764616,7803159,0.150557621,9,63,197,0.146840149,9,61,199,267,269,0.992565056,1,0.972222222,TRUE
chr11:42764727-42779615(McCarroll2008_CNP_1719),chr11,42764727,42779615,0.16798419,8,69,176,0.180297398,8,81,180,251,253,0.992094862,0.974683544,1,TRUE
chr11:49662437-49719078(McCarroll2008_CNP_1725),chr11,49662437,49719078,0.05204461,0,28,241,0.05204461,0,28,241,269,269,1,1,1,TRUE
chr11:55125608-55214585(McCarroll2008_CNP_1732),chr11,55125608,55214585,0.250929368,16,103,150,0.250929368,16,103,150,269,269,1,1,1,TRUE
chr12:9519645-9624559(McCarroll2008_CNP_1811),chr12,9519645,9624559,0.501865672,74,121,73,0.13197026,0,71,198,76,268,0.28358209,1,0.364102564,FALSE
chr12:10469634-10492386(McCarroll2008_CNP_1812),chr12,10469634,10492386,0.157894737,8,68,190,0.039033457,0,21,248,201,266,0.755639098,1,0.25,FALSE
chr12:30123768-30140200(McCarroll2008_CNP_1832),chr12,30123768,30140200,0.111940299,7,46,215,0.1133829,7,47,215,268,268,1,1,1,TRUE
chr12:33187673-33203641(McCarroll2008_CNP_1836),chr12,33187673,33203641,0.095149254,4,43,221,0.094795539,4,43,222,268,268,1,1,1,TRUE
chr12:34094623-34112572(McCarroll2008_CNP_1841),chr12,34094623,34112572,0.099250936,7,39,221,0.102230483,8,39,222,266,267,0.996254682,0.978723404,1,TRUE
chr12:69153942-69169294(McCarroll2008_CNP_1861),chr12,69153942,69169294,0.151119403,7,67,194,0.152416357,7,68,194,268,268,1,1,1,TRUE
chr12:82682421-82694372(McCarroll2008_CNP_1872),chr12,82682421,82694372,0.284883721,29,89,140,0.001858736,0,1,268,139,258,0.53875969,0,0,FALSE
chr12:98314424-98327865(McCarroll2008_CNP_1879),chr12,98314424,98327865,0.097014925,5,42,221,0.096654275,5,42,222,268,268,1,1,1,TRUE
chr13:31425622-31441423(McCarroll2008_CNP_1922),chr13,31425622,31441423,0.18401487,12,75,182,0.18401487,12,75,182,269,269,1,1,1,TRUE
chr13:38640763-38654136(McCarroll2008_CNP_1926),chr13,38640763,38654136,0.081132075,2,39,224,0.081784387,2,40,227,265,265,1,1,1,TRUE
chr13:56651271-56681381(McCarroll2008_CNP_1941),chr13,56651271,56681381,0.304832714,45,74,150,0.304832714,45,74,150,269,269,1,1,1,TRUE
chr14:40675246-40732099(McCarroll2008_CNP_2007),chr14,40675246,40732099,0.119402985,7,50,211,0.120817844,7,51,211,268,268,1,1,1,TRUE
chr14:73065876-73095732(McCarroll2008_CNP_2026),chr14,73065876,73095732,0.549242424,100,90,74,0.189591078,0,102,167,75,264,0.284090909,1,0.531578947,FALSE
chr15:54572995-54593269(McCarroll2008_CNP_2099),chr15,54572995,54593269,0.063197026,2,30,237,0.063197026,2,30,237,269,269,1,1,1,TRUE
chr16:19848151-19879863(McCarroll2008_CNP_2150),chr16,19848151,19879863,0.06133829,1,31,237,0.06133829,1,31,237,269,269,1,1,1,TRUE
chr16:54348890-54384945(McCarroll2008_CNP_2184),chr16,54348890,54384945,0.171003717,14,64,191,0.171003717,14,64,191,269,269,1,1,1,TRUE
chr17:14979651-15000227(McCarroll2008_CNP_2238),chr17,14979651,15000227,0.063197026,3,28,238,0.063197026,3,28,238,269,269,1,1,1,TRUE
chr17:36759438-36781021(McCarroll2008_CNP_2259),chr17,36759438,36781021,0.057620818,2,27,240,0.057620818,2,27,240,269,269,1,1,1,TRUE
chr18:36509418-36524387(McCarroll2008_CNP_2326),chr18,36509418,36524387,0.226235741,13,93,157,0.230483271,13,98,158,263,263,1,1,1,TRUE
chr18:56063921-56078194(McCarroll2008_CNP_2341),chr18,56063921,56078194,0.091880342,2,39,193,0.007434944,0,4,265,195,234,0.833333333,1,0.097560976,FALSE
chr18:64892086-64909306(McCarroll2008_CNP_2352),chr18,64892086,64909306,0.065055762,3,29,237,0.065055762,3,29,237,269,269,1,1,1,TRUE
chr19:20383046-20518077(McCarroll2008_CNP_2384),chr19,20383046,20518077,0.092936803,2,46,221,0.091078067,2,45,222,268,269,0.996282528,1,0.979166667,TRUE
chr20:1500219-1513562(McCarroll2008_CNP_2453),chr20,1500219,1513562,0.050185874,1,25,243,0.050185874,1,25,243,269,269,1,1,1,TRUE
chr20:1504580-1546893(McCarroll2008_CNP_2454),chr20,1504580,1546893,0.795539033,169,90,10,0.050185874,1,25,243,17,269,0.063197026,1,0.1003861,FALSE
chr21:22572638-22591527(McCarroll2008_CNP_2512),chr21,22572638,22591527,0.156716418,22,40,206,0.154275093,22,39,208,267,268,0.996268657,1,0.983870968,TRUE
chr22:22608016-22675785(McCarroll2008_CNP_2559),chr22,22608016,22675785,0.539622642,79,128,58,0.024163569,1,11,257,58,265,0.218867925,0.5,0.028985507,FALSE
chr22:22675529-22731814(McCarroll2008_CNP_2560),chr22,22675529,22731814,0.533457249,82,123,64,0.154275093,0,83,186,65,269,0.241635688,1,0.404878049,FALSE
chr22:37688565-37710253(McCarroll2008_CNP_2576),chr22,37688565,37710253,0.154275093,14,55,200,0.154275093,14,55,200,269,269,1,1,1,TRUE
chr4:116387056-116400574(McCarroll2008_CNP_10779),chr4,116387056,116400574,0.053149606,0,27,227,0.055762082,0,30,239,253,254,0.996062992,0.964285714,1,TRUE
chr6:31440851-31453789(McCarroll2008_CNP_11042),chr6,31440851,31453789,0.056962025,1,25,211,0.050185874,1,25,243,237,237,1,1,1,TRUE
chr11:81184919-81199913(McCarroll2008_CNP_11904),chr11,81184919,81199913,0.066801619,0,33,214,0.06133829,0,33,236,247,247,1,1,1,TRUE
chr11:93332704-93346240(McCarroll2008_CNP_11914),chr11,93332704,93346240,0.077868852,3,32,209,0.07063197,3,32,234,244,244,1,1,1,TRUE
chr14:22159681-22174049(McCarroll2008_CNP_12144),chr14,22159681,22174049,0.051020408,1,23,221,0.046468401,1,23,245,245,245,1,1,1,TRUE
chr1:10288128-10305570(McCarroll2008_CNP_10),chr1,10288128,10305570,0.037174721,2,16,251,0.037174721,2,16,251,269,269,1,1,1,TRUE
chr1:94898354-94932987(McCarroll2008_CNP_71),chr1,94898354,94932987,0.013011152,1,5,263,0.013011152,1,5,263,269,269,1,1,1,TRUE
chr1:106105789-106121611(McCarroll2008_CNP_81),chr1,106105789,106121611,0.018587361,0,10,259,0.022304833,0,12,257,267,269,0.992565056,0.833333333,1,TRUE
chr1:156778620-156792041(McCarroll2008_CNP_114),chr1,156778620,156792041,0.016728625,0,9,260,0.016728625,0,9,260,269,269,1,1,1,TRUE
chr1:187588758-187724766(McCarroll2008_CNP_134),chr1,187588758,187724766,0.011152416,0,6,263,0.011152416,0,6,263,269,269,1,1,1,TRUE
chr1:190090692-190138873(McCarroll2008_CNP_141),chr1,190090692,190138873,0.016728625,0,9,260,0.016728625,0,9,260,269,269,1,1,1,TRUE
chr2:6210763-6230305(McCarroll2008_CNP_189),chr2,6210763,6230305,0.031716418,0,17,251,0.031598513,0,17,252,268,268,1,1,1,TRUE
chr2:24455486-24469632(McCarroll2008_CNP_200),chr2,24455486,24469632,0.03358209,0,18,250,0.033457249,0,18,251,268,268,1,1,1,TRUE
chr2:35430499-35463674(McCarroll2008_CNP_209),chr2,35430499,35463674,0.014925373,0,8,260,0.014869888,0,8,261,268,268,1,1,1,TRUE
chr2:36185123-36198058(McCarroll2008_CNP_212),chr2,36185123,36198058,0.044776119,0,24,244,0.044609665,0,24,245,268,268,1,1,1,TRUE
chr2:115107891-115122469(McCarroll2008_CNP_276),chr2,115107891,115122469,0.031716418,1,15,252,0.031598513,1,15,253,268,268,1,1,1,TRUE
chr2:183789037-183802391(McCarroll2008_CNP_323),chr2,183789037,183802391,0.020522388,0,11,257,0.020446097,0,11,258,268,268,1,1,1,TRUE
chr2:184960298-184978074(McCarroll2008_CNP_328),chr2,184960298,184978074,0.029850746,0,16,252,0.029739777,0,16,253,268,268,1,1,1,TRUE
chr2:189271201-189292574(McCarroll2008_CNP_329),chr2,189271201,189292574,0.031716418,2,13,253,0.031598513,2,13,254,268,268,1,1,1,TRUE
chr2:212889794-212905057(McCarroll2008_CNP_340),chr2,212889794,212905057,0.024253731,0,13,255,0.024163569,0,13,256,268,268,1,1,1,TRUE
chr3:1653250-1671567(McCarroll2008_CNP_363),chr3,1653250,1671567,0.022304833,0,12,257,0.024163569,0,13,256,268,269,0.996282528,0.923076923,1,TRUE
chr3:4162639-4177015(McCarroll2008_CNP_364),chr3,4162639,4177015,0.022304833,0,12,257,0.024163569,0,13,256,268,269,0.996282528,0.923076923,1,TRUE
chr3:6195911-6220260(McCarroll2008_CNP_368),chr3,6195911,6220260,0.013011152,0,7,262,0.013011152,0,7,262,269,269,1,1,1,TRUE
chr3:6621128-6633332(McCarroll2008_CNP_369),chr3,6621128,6633332,0.044609665,0,24,245,0.044609665,0,24,245,269,269,1,1,1,TRUE
chr3:37952108-37966932(McCarroll2008_CNP_399),chr3,37952108,37966932,0.042750929,1,21,247,0.042750929,1,21,247,269,269,1,1,1,TRUE
chr3:52998416-53021559(McCarroll2008_CNP_413),chr3,52998416,53021559,0.039033457,1,19,249,0.039033457,1,19,249,269,269,1,1,1,TRUE
chr3:65159275-65190492(McCarroll2008_CNP_422),chr3,65159275,65190492,0.044609665,0,24,245,0.042750929,0,23,246,268,269,0.996282528,1,0.958333333,TRUE
chr3:75504797-75632866(McCarroll2008_CNP_429),chr3,75504797,75632866,0.016728625,1,7,261,0.016728625,1,7,261,269,269,1,1,1,TRUE
chr3:89749371-89761830(McCarroll2008_CNP_444),chr3,89749371,89761830,0.020446097,0,11,258,0.020446097,0,11,258,269,269,1,1,1,TRUE
chr3:127189960-127209552(McCarroll2008_CNP_463),chr3,127189960,127209552,0.046468401,3,19,247,0.048327138,3,20,246,268,269,0.996282528,0.956521739,1,TRUE
chr3:150441084-150455807(McCarroll2008_CNP_493),chr3,150441084,150455807,0.046468401,0,25,244,0.046468401,0,25,244,269,269,1,1,1,TRUE
chr3:166746814-166784809(McCarroll2008_CNP_512),chr3,166746814,166784809,0.022304833,0,12,257,0.018587361,0,10,259,267,269,0.992565056,1,0.833333333,TRUE
chr4:11981711-11993353(McCarroll2008_CNP_559),chr4,11981711,11993353,0.013059701,0,7,261,0.013011152,0,7,262,268,268,1,1,1,TRUE
chr4:20160809-20178040(McCarroll2008_CNP_564),chr4,20160809,20178040,0.016791045,1,7,260,0.016728625,1,7,261,268,268,1,1,1,TRUE
chr4:33050531-33067581(McCarroll2008_CNP_574),chr4,33050531,33067581,0.029850746,0,16,252,0.029739777,0,16,253,268,268,1,1,1,TRUE
chr4:43711642-43725503(McCarroll2008_CNP_581),chr4,43711642,43725503,0.027985075,0,15,253,0.027881041,0,15,254,268,268,1,1,1,TRUE
chr4:57233077-57244259(McCarroll2008_CNP_591),chr4,57233077,57244259,0.03358209,3,12,253,0.033457249,3,12,254,268,268,1,1,1,TRUE
chr4:98386437-98409155(McCarroll2008_CNP_638),chr4,98386437,98409155,0.026119403,1,12,255,0.029739777,1,14,254,266,268,0.992537313,0.866666667,1,TRUE
chr4:104421263-104472383(McCarroll2008_CNP_641),chr4,104421263,104472383,0.027985075,1,13,254,0.027881041,1,13,255,268,268,1,1,1,TRUE
chr4:112511868-112530864(McCarroll2008_CNP_657),chr4,112511868,112530864,0.018656716,0,10,258,0.018587361,0,10,259,268,268,1,1,1,TRUE
chr4:140447973-140462810(McCarroll2008_CNP_687),chr4,140447973,140462810,0.016791045,1,7,260,0.016728625,1,7,261,268,268,1,1,1,TRUE
chr4:156808718-156822445(McCarroll2008_CNP_704),chr4,156808718,156822445,0.016791045,0,9,259,0.016728625,0,9,260,268,268,1,1,1,TRUE
chr4:158944012-158955828(McCarroll2008_CNP_709),chr4,158944012,158955828,0.018656716,0,10,258,0.018587361,0,10,259,268,268,1,1,1,TRUE
chr4:161267220-161291569(McCarroll2008_CNP_712),chr4,161267220,161291569,0.016791045,0,9,259,0.016728625,0,9,260,268,268,1,1,1,TRUE
chr4:179122424-179134525(McCarroll2008_CNP_731),chr4,179122424,179134525,0.014925373,0,8,260,0.014869888,0,8,261,268,268,1,1,1,TRUE
chr5:8750523-8805138(McCarroll2008_CNP_753),chr5,8750523,8805138,0.020446097,0,11,258,0.020446097,0,11,258,269,269,1,1,1,TRUE
chr5:17639656-17703273(McCarroll2008_CNP_770),chr5,17639656,17703273,0.026119403,1,12,255,0.037174721,1,18,250,260,268,0.970149254,0.631578947,0.923076923,FALSE
chr5:27556143-27566777(McCarroll2008_CNP_778),chr5,27556143,27566777,0.046992481,3,19,244,0.05204461,3,22,244,266,266,1,1,1,TRUE
chr5:97093292-97124490(McCarroll2008_CNP_829),chr5,97093292,97124490,0.011152416,0,6,263,0.011152416,0,6,263,269,269,1,1,1,TRUE
chr5:101196120-101239788(McCarroll2008_CNP_839),chr5,101196120,101239788,0.014869888,0,8,261,0.014869888,0,8,261,269,269,1,1,1,TRUE
chr5:104459614-104511104(McCarroll2008_CNP_846),chr5,104459614,104511104,0.011152416,0,6,263,0.00929368,0,5,264,268,269,0.996282528,1,0.833333333,TRUE
chr5:115619233-115658127(McCarroll2008_CNP_852),chr5,115619233,115658127,0.013011152,0,7,262,0.013011152,0,7,262,269,269,1,1,1,TRUE
chr5:151490579-151503544(McCarroll2008_CNP_876),chr5,151490579,151503544,0.046468401,0,25,244,0.046468401,0,25,244,269,269,1,1,1,TRUE
chr5:155504796-155527862(McCarroll2008_CNP_878),chr5,155504796,155527862,0.026022305,0,14,255,0.026022305,0,14,255,269,269,1,1,1,TRUE
chr5:165767240-165787533(McCarroll2008_CNP_886),chr5,165767240,165787533,0.024163569,0,13,256,0.024163569,0,13,256,269,269,1,1,1,TRUE
chr6:77068713-77089327(McCarroll2008_CNP_973),chr6,77068713,77089327,0.033457249,0,18,251,0.033457249,0,18,251,269,269,1,1,1,TRUE
chr6:87461524-87472835(McCarroll2008_CNP_984),chr6,87461524,87472835,0.020446097,0,11,258,0.020446097,0,11,258,269,269,1,1,1,TRUE
chr7:4378474-4390353(McCarroll2008_CNP_1042),chr7,4378474,4390353,0.016791045,1,7,260,0.016728625,1,7,261,268,268,1,1,1,TRUE
chr7:11966497-11981296(McCarroll2008_CNP_1051),chr7,11966497,11981296,0.013059701,0,7,261,0.014869888,0,8,261,267,268,0.996268657,0.875,1,TRUE
chr7:13069593-13090544(McCarroll2008_CNP_1053),chr7,13069593,13090544,0.043233083,1,21,244,0.00929368,0,5,264,248,266,0.932330827,1,0.227272727,FALSE
chr7:78638235-78695629(McCarroll2008_CNP_1110),chr7,78638235,78695629,0.018656716,0,10,258,0.018587361,0,10,259,268,268,1,1,1,TRUE
chr7:86067821-86087341(McCarroll2008_CNP_1115),chr7,86067821,86087341,0.018656716,0,10,258,0.020446097,0,11,258,267,268,0.996268657,0.909090909,1,TRUE
chr7:104247877-104264886(McCarroll2008_CNP_1139),chr7,104247877,104264886,0.01119403,0,6,262,0.011152416,0,6,263,268,268,1,1,1,TRUE
chr7:110830811-110849118(McCarroll2008_CNP_1145),chr7,110830811,110849118,0.014925373,0,8,260,0.018587361,0,10,259,266,268,0.992537313,0.8,1,TRUE
chr7:118939214-118954683(McCarroll2008_CNP_1154),chr7,118939214,118954683,0.027985075,0,15,253,0.027881041,0,15,254,268,268,1,1,1,TRUE
chr7:141886589-141907884(McCarroll2008_CNP_1177),chr7,141886589,141907884,0.01509434,0,8,257,0.018587361,0,10,259,265,265,1,1,1,TRUE
chr8:13638472-13649762(McCarroll2008_CNP_1258),chr8,13638472,13649762,0.022304833,1,10,258,0.022304833,1,10,258,269,269,1,1,1,TRUE
chr8:15442431-15460977(McCarroll2008_CNP_1269),chr8,15442431,15460977,0.026022305,0,14,255,0.026022305,0,14,255,269,269,1,1,1,TRUE
chr8:16301635-16324032(McCarroll2008_CNP_1272),chr8,16301635,16324032,0.046468401,0,25,244,0.046468401,0,25,244,269,269,1,1,1,TRUE
chr8:40297954-40313668(McCarroll2008_CNP_1294),chr8,40297954,40313668,0.027881041,0,15,254,0.027881041,0,15,254,269,269,1,1,1,TRUE
chr8:55366599-55378373(McCarroll2008_CNP_1308),chr8,55366599,55378373,0.046468401,2,21,246,0.046468401,2,21,246,269,269,1,1,1,TRUE
chr8:61160356-61175323(McCarroll2008_CNP_1313),chr8,61160356,61175323,0.011152416,1,4,264,0.011152416,1,4,264,269,269,1,1,1,TRUE
chr8:68705013-68717760(McCarroll2008_CNP_1320),chr8,68705013,68717760,0.027881041,0,15,254,0.027881041,0,15,254,269,269,1,1,1,TRUE
chr8:85420438-85436221(McCarroll2008_CNP_1329),chr8,85420438,85436221,0.042750929,2,19,248,0.042750929,2,19,248,269,269,1,1,1,TRUE
chr8:135125437-135140890(McCarroll2008_CNP_1364),chr8,135125437,135140890,0.033457249,1,16,252,0.033457249,1,16,252,269,269,1,1,1,TRUE
chr8:137831926-137930499(McCarroll2008_CNP_1367),chr8,137831926,137930499,0.011152416,0,6,263,0.013011152,0,7,262,268,269,0.996282528,0.857142857,1,TRUE
chr9:503099-521993(McCarroll2008_CNP_1378),chr9,503099,521993,0.020599251,0,11,256,0.020446097,0,11,258,267,267,1,1,1,TRUE
chr9:576969-597903(McCarroll2008_CNP_1380),chr9,576969,597903,0.016853933,1,7,259,0.016728625,1,7,261,267,267,1,1,1,TRUE
chr9:4513770-4524873(McCarroll2008_CNP_1395),chr9,4513770,4524873,0.009363296,0,5,262,0.00929368,0,5,264,267,267,1,1,1,TRUE
chr9:11952036-11970492(McCarroll2008_CNP_1404),chr9,11952036,11970492,0.011278195,0,6,260,0.00929368,0,5,264,265,266,0.996240602,1,0.833333333,TRUE
chr9:28032588-28045691(McCarroll2008_CNP_1418),chr9,28032588,28045691,0.039325843,1,19,247,0.040892193,1,20,248,266,267,0.996254682,0.952380952,1,TRUE
chr9:73441556-73453642(McCarroll2008_CNP_1475),chr9,73441556,73453642,0.024344569,0,13,254,0.024163569,0,13,256,267,267,1,1,1,TRUE
chr9:106398809-106411604(McCarroll2008_CNP_1495),chr9,106398809,106411604,0.037593985,0,20,246,0.037174721,0,20,249,266,266,1,1,1,TRUE
chr9:128010136-128021523(McCarroll2008_CNP_1513),chr9,128010136,128021523,0.037453184,1,18,248,0.037174721,1,18,250,267,267,1,1,1,TRUE
chr10:13091556-13103846(McCarroll2008_CNP_1548),chr10,13091556,13103846,0.018587361,1,8,260,0.018587361,1,8,260,269,269,1,1,1,TRUE
chr10:58181381-58201843(McCarroll2008_CNP_1605),chr10,58181381,58201843,0.044609665,0,24,245,0.044609665,0,24,245,269,269,1,1,1,TRUE
chr10:58567176-58611913(McCarroll2008_CNP_1607),chr10,58567176,58611913,0.020446097,1,9,259,0.020446097,1,9,259,269,269,1,1,1,TRUE
chr11:21144965-21171513(McCarroll2008_CNP_1693),chr11,21144965,21171513,0.014869888,0,8,261,0.014869888,0,8,261,269,269,1,1,1,TRUE
chr11:25560122-25589722(McCarroll2008_CNP_1702),chr11,25560122,25589722,0.014869888,0,8,261,0.011152416,0,6,263,265,269,0.985130112,0.833333333,0.625,FALSE
chr11:25658542-25680557(McCarroll2008_CNP_1704),chr11,25658542,25680557,0.027881041,0,15,254,0.027881041,0,15,254,269,269,1,1,1,TRUE
chr11:55212259-55308668(McCarroll2008_CNP_1733),chr11,55212259,55308668,0.013011152,0,7,262,0.013011152,0,7,262,269,269,1,1,1,TRUE
chr11:79645579-79664825(McCarroll2008_CNP_1754),chr11,79645579,79664825,0.014869888,1,6,262,0.016728625,1,7,261,268,269,0.996282528,0.875,1,TRUE
chr11:104424072-104441443(McCarroll2008_CNP_1777),chr11,104424072,104441443,0.037174721,1,18,250,0.037174721,1,18,250,269,269,1,1,1,TRUE
chr12:2111123-2133667(McCarroll2008_CNP_1799),chr12,2111123,2133667,0.029850746,1,14,253,0.029739777,1,14,254,268,268,1,1,1,TRUE
chr12:12423764-12438138(McCarroll2008_CNP_1815),chr12,12423764,12438138,0.020522388,0,11,257,0.020446097,0,11,258,268,268,1,1,1,TRUE
chr12:27534008-27547629(McCarroll2008_CNP_1827),chr12,27534008,27547629,0.048507463,2,22,244,0.048327138,2,22,245,268,268,1,1,1,TRUE
chr12:39098864-39112744(McCarroll2008_CNP_1846),chr12,39098864,39112744,0.020522388,2,7,259,0.018587361,2,6,261,267,268,0.996268657,1,0.888888889,TRUE
chr12:81761030-81772904(McCarroll2008_CNP_1868),chr12,81761030,81772904,0.007490637,0,4,263,0.007434944,0,4,265,267,267,1,1,1,TRUE
chr12:125561291-125575543(McCarroll2008_CNP_1893),chr12,125561291,125575543,0.016791045,0,9,259,0.016728625,0,9,260,268,268,1,1,1,TRUE
chr12:129709262-129721322(McCarroll2008_CNP_1898),chr12,129709262,129721322,0.018656716,0,10,258,0.018587361,0,10,259,268,268,1,1,1,TRUE
chr12:130377166-130396707(McCarroll2008_CNP_1902),chr12,130377166,130396707,0.018656716,1,8,259,0.027881041,0,15,254,261,268,0.973880597,0.6,1,FALSE
chr13:19358397-19372459(McCarroll2008_CNP_1912),chr13,19358397,19372459,0.022304833,1,10,258,0.022304833,1,10,258,269,269,1,1,1,TRUE
chr13:56762188-56791596(McCarroll2008_CNP_1942),chr13,56762188,56791596,0.016728625,0,9,260,0.016728625,0,9,260,269,269,1,1,1,TRUE
chr13:63117789-63139693(McCarroll2008_CNP_1946),chr13,63117789,63139693,0.029739777,1,14,254,0.033457249,1,16,252,267,269,0.992565056,0.882352941,1,TRUE
chr13:68144981-68171243(McCarroll2008_CNP_1952),chr13,68144981,68171243,0.027881041,0,15,254,0.027881041,0,15,254,269,269,1,1,1,TRUE
chr13:103069861-103081411(McCarroll2008_CNP_1972),chr13,103069861,103081411,0.022304833,0,12,257,0.022304833,0,12,257,269,269,1,1,1,TRUE
chr14:43566678-43605205(McCarroll2008_CNP_2014),chr14,43566678,43605205,0.02238806,1,10,257,0.022304833,1,10,258,268,268,1,1,1,TRUE
chr15:21601534-21615186(McCarroll2008_CNP_2060),chr15,21601534,21615186,0.020446097,0,11,258,0.020446097,0,11,258,269,269,1,1,1,TRUE
chr15:28733294-28773337(McCarroll2008_CNP_2075),chr15,28733294,28773337,0.018587361,0,10,259,0.018587361,0,10,259,269,269,1,1,1,TRUE
chr15:45990539-46006995(McCarroll2008_CNP_2093),chr15,45990539,46006995,0.027881041,0,15,254,0.027881041,0,15,254,269,269,1,1,1,TRUE
chr16:12602660-12619014(McCarroll2008_CNP_2139),chr16,12602660,12619014,0.018587361,0,10,259,0.016728625,0,9,260,268,269,0.996282528,1,0.9,TRUE
chr16:20415282-20445540(McCarroll2008_CNP_2153),chr16,20415282,20445540,0.027881041,0,15,254,0.027881041,0,15,254,269,269,1,1,1,TRUE
chr16:77612649-77625658(McCarroll2008_CNP_2204),chr16,77612649,77625658,0.022304833,1,10,258,0.022304833,1,10,258,269,269,1,1,1,TRUE
chr17:19435328-19484039(McCarroll2008_CNP_2246),chr17,19435328,19484039,0.014869888,0,8,261,0.014869888,0,8,261,269,269,1,1,1,TRUE
chr18:62053414-62067569(McCarroll2008_CNP_2348),chr18,62053414,62067569,0.033457249,1,16,252,0.033457249,1,16,252,269,269,1,1,1,TRUE
chr18:63450071-63471327(McCarroll2008_CNP_2350),chr18,63450071,63471327,0.027881041,0,15,254,0.027881041,0,15,254,269,269,1,1,1,TRUE
chr20:4389568-4403987(McCarroll2008_CNP_2457),chr20,4389568,4403987,0.024163569,1,11,257,0.024163569,1,11,257,269,269,1,1,1,TRUE
chr20:15254370-15270974(McCarroll2008_CNP_2468),chr20,15254370,15270974,0.020446097,1,9,259,0.020446097,1,9,259,269,269,1,1,1,TRUE
chr21:23346419-23360207(McCarroll2008_CNP_2513),chr21,23346419,23360207,0.026217228,0,14,253,0.029739777,1,14,254,267,267,1,1,1,TRUE
chr1:15660011-15688808(McCarroll2008_CNP_10030),chr1,15660011,15688808,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr1:22188098-22214830(McCarroll2008_CNP_10045),chr1,22188098,22214830,0.042635659,0,22,236,0.040892193,0,22,247,258,258,1,1,1,TRUE
chr1:38896191-38913792(McCarroll2008_CNP_10055),chr1,38896191,38913792,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr1:40733766-40747251(McCarroll2008_CNP_10056),chr1,40733766,40747251,0.025,0,13,247,0.026022305,0,14,255,260,260,1,1,1,TRUE
chr1:59811510-59835867(McCarroll2008_CNP_10068),chr1,59811510,59835867,0.003717472,0,2,267,0.063197026,1,32,236,238,269,0.884758364,0.060606061,1,FALSE
chr1:77542460-77557420(McCarroll2008_CNP_10083),chr1,77542460,77557420,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr1:105629380-105646635(McCarroll2008_CNP_10104),chr1,105629380,105646635,0.007782101,0,4,253,0.005576208,0,3,266,256,257,0.996108949,1,0.75,FALSE
chr1:105964819-106021548(McCarroll2008_CNP_10107),chr1,105964819,106021548,0.01119403,0,6,262,0.011152416,0,6,263,268,268,1,1,1,TRUE
chr1:111624849-111642017(McCarroll2008_CNP_10118),chr1,111624849,111642017,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr1:111725660-111739750(McCarroll2008_CNP_10119),chr1,111725660,111739750,0.011406844,0,6,257,0.011152416,0,6,263,263,263,1,1,1,TRUE
chr1:163683498-163695794(McCarroll2008_CNP_10158),chr1,163683498,163695794,0.011152416,1,4,264,0.011152416,1,4,264,269,269,1,1,1,TRUE
chr1:166350739-166363038(McCarroll2008_CNP_10161),chr1,166350739,166363038,0.003717472,0,2,267,0.00929368,0,5,264,266,269,0.988847584,0.4,1,FALSE
chr1:168629270-168658829(McCarroll2008_CNP_10163),chr1,168629270,168658829,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr1:176921933-176945811(McCarroll2008_CNP_10168),chr1,176921933,176945811,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr1:187348623-187364115(McCarroll2008_CNP_10177),chr1,187348623,187364115,0.011538462,0,6,254,0.013011152,0,7,262,259,260,0.996153846,0.857142857,1,TRUE
chr1:188231989-188258049(McCarroll2008_CNP_10181),chr1,188231989,188258049,0.007462687,0,4,264,0.007434944,0,4,265,268,268,1,1,1,TRUE
chr1:191922641-191981999(McCarroll2008_CNP_10186),chr1,191922641,191981999,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr1:193199702-193218877(McCarroll2008_CNP_10187),chr1,193199702,193218877,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr1:208666369-208684147(McCarroll2008_CNP_10203),chr1,208666369,208684147,0.011152416,0,6,263,0.011152416,0,6,263,269,269,1,1,1,TRUE
chr1:211066638-211082059(McCarroll2008_CNP_10204),chr1,211066638,211082059,0.035433071,1,16,237,0.033457249,1,16,252,254,254,1,1,1,TRUE
chr1:219807673-219825232(McCarroll2008_CNP_10210),chr1,219807673,219825232,0.016853933,0,9,258,0.016728625,0,9,260,267,267,1,1,1,TRUE
chr1:243698665-243718527(McCarroll2008_CNP_10227),chr1,243698665,243718527,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr2:14618720-14632544(McCarroll2008_CNP_10247),chr2,14618720,14632544,0.016981132,0,9,256,0.016728625,0,9,260,265,265,1,1,1,TRUE
chr2:18032156-18061737(McCarroll2008_CNP_10252),chr2,18032156,18061737,0.005639098,0,3,263,0.005576208,0,3,266,266,266,1,1,1,TRUE
chr2:40775879-40808106(McCarroll2008_CNP_10277),chr2,40775879,40808106,0.005597015,0,3,265,0.005576208,0,3,266,268,268,1,1,1,TRUE
chr2:42295861-42311117(McCarroll2008_CNP_10279),chr2,42295861,42311117,0.005660377,0,3,262,0.005576208,0,3,266,263,265,0.99245283,0.666666667,0.666666667,FALSE
chr2:44675343-44687239(McCarroll2008_CNP_10280),chr2,44675343,44687239,0.015418502,0,7,220,0.014869888,0,8,261,226,227,0.995594714,0.875,1,TRUE
chr2:67609459-67624396(McCarroll2008_CNP_10299),chr2,67609459,67624396,0.01509434,0,8,257,0.016728625,0,9,260,264,265,0.996226415,0.888888889,1,TRUE
chr2:113173870-113200358(McCarroll2008_CNP_10361),chr2,113173870,113200358,0.003731343,0,2,266,0.003717472,0,2,267,268,268,1,1,1,TRUE
chr2:117440778-117457675(McCarroll2008_CNP_10367),chr2,117440778,117457675,0.009469697,0,5,259,0.011152416,0,6,263,263,264,0.996212121,0.833333333,1,TRUE
chr2:131352910-131365298(McCarroll2008_CNP_10382),chr2,131352910,131365298,0.006097561,0,3,243,0.007434944,0,4,265,246,246,1,1,1,TRUE
chr2:150734697-150750976(McCarroll2008_CNP_10398),chr2,150734697,150750976,0.012,0,6,244,0.011152416,0,6,263,248,250,0.992,0.833333333,0.833333333,TRUE
chr2:153373432-153510030(McCarroll2008_CNP_10400),chr2,153373432,153510030,0.003745318,0,2,265,0.005576208,0,3,266,266,267,0.996254682,0.666666667,1,FALSE
chr2:164346734-164358370(McCarroll2008_CNP_10405),chr2,164346734,164358370,0.046692607,0,24,233,0.044609665,0,24,245,257,257,1,1,1,TRUE
chr2:174244122-174259919(McCarroll2008_CNP_10410),chr2,174244122,174259919,0.003731343,0,2,266,0.003717472,0,2,267,268,268,1,1,1,TRUE
chr2:184497759-184515686(McCarroll2008_CNP_10417),chr2,184497759,184515686,0.005681818,0,3,261,0.007434944,0,4,265,264,264,1,1,1,TRUE
chr2:195017965-195039089(McCarroll2008_CNP_10429),chr2,195017965,195039089,0.007575758,0,4,260,0.007434944,0,4,265,264,264,1,1,1,TRUE
chr2:211475395-211491620(McCarroll2008_CNP_10440),chr2,211475395,211491620,0.009541985,0,5,257,0.00929368,0,5,264,262,262,1,1,1,TRUE
chr2:226660007-226674662(McCarroll2008_CNP_10445),chr2,226660007,226674662,0.014925373,0,8,260,0.014869888,0,8,261,268,268,1,1,1,TRUE
chr3:1004997-1019189(McCarroll2008_CNP_10458),chr3,1004997,1019189,0.009398496,0,5,261,0.00929368,0,5,264,266,266,1,1,1,TRUE
chr3:1752522-1767585(McCarroll2008_CNP_10460),chr3,1752522,1767585,0.009363296,0,5,262,0.00929368,0,5,264,267,267,1,1,1,TRUE
chr3:1883098-1905851(McCarroll2008_CNP_10461),chr3,1883098,1905851,0.003717472,0,2,267,0.031598513,2,13,254,254,269,0.944237918,0.133333333,1,FALSE
chr3:28780441-28796112(McCarroll2008_CNP_10496),chr3,28780441,28796112,0.007722008,0,4,255,0.007434944,0,4,265,259,259,1,1,1,TRUE
chr3:30881154-30893645(McCarroll2008_CNP_10500),chr3,30881154,30893645,0.007575758,0,4,260,0.007434944,0,4,265,264,264,1,1,1,TRUE
chr3:39169068-39193061(McCarroll2008_CNP_10506),chr3,39169068,39193061,0.003731343,0,2,266,0.005576208,0,3,266,267,268,0.996268657,0.666666667,1,FALSE
chr3:41750151-41768499(McCarroll2008_CNP_10510),chr3,41750151,41768499,0.009363296,0,5,262,0.00929368,0,5,264,267,267,1,1,1,TRUE
chr3:57928869-57957991(McCarroll2008_CNP_10517),chr3,57928869,57957991,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr3:62682720-62695900(McCarroll2008_CNP_10523),chr3,62682720,62695900,0.019379845,0,10,248,0.018587361,0,10,259,258,258,1,1,1,TRUE
chr3:74225849-74239561(McCarroll2008_CNP_10535),chr3,74225849,74239561,0.018828452,0,9,230,0.020446097,0,11,258,238,239,0.9958159,0.9,1,TRUE
chr3:77905146-77929562(McCarroll2008_CNP_10538),chr3,77905146,77929562,0.007722008,0,4,255,0.007434944,0,4,265,259,259,1,1,1,TRUE
chr3:87969966-87989943(McCarroll2008_CNP_10548),chr3,87969966,87989943,0.008695652,0,4,226,0.007434944,0,4,265,228,230,0.991304348,0.75,0.75,FALSE
chr3:89472282-89507071(McCarroll2008_CNP_10549),chr3,89472282,89507071,0.005597015,0,3,265,0.005576208,0,3,266,268,268,1,1,1,TRUE
chr3:89614146-89634707(McCarroll2008_CNP_10550),chr3,89614146,89634707,0.005836576,0,3,254,0.005576208,0,3,266,257,257,1,1,1,TRUE
chr3:117684415-117703429(McCarroll2008_CNP_10568),chr3,117684415,117703429,0.007782101,0,4,253,0.007434944,0,4,265,257,257,1,1,1,TRUE
chr3:120829088-120841628(McCarroll2008_CNP_10572),chr3,120829088,120841628,0.013565891,0,7,251,0.013011152,0,7,262,258,258,1,1,1,TRUE
chr3:136320315-136332533(McCarroll2008_CNP_10588),chr3,136320315,136332533,0.022727273,1,10,253,0.024163569,1,11,257,263,264,0.996212121,0.916666667,1,TRUE
chr3:138505648-138530910(McCarroll2008_CNP_10589),chr3,138505648,138530910,0.014925373,0,8,260,0.014869888,0,8,261,268,268,1,1,1,TRUE
chr3:145760733-145775405(McCarroll2008_CNP_10592),chr3,145760733,145775405,0.016981132,0,9,256,0.016728625,0,9,260,265,265,1,1,1,TRUE
chr3:153824784-153843892(McCarroll2008_CNP_10599),chr3,153824784,153843892,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr3:161834634-161846803(McCarroll2008_CNP_10607),chr3,161834634,161846803,0.005576208,0,3,266,0.007434944,0,4,265,268,269,0.996282528,0.75,1,FALSE
chr3:163615294-163630399(McCarroll2008_CNP_10610),chr3,163615294,163630399,0.019565217,0,9,221,0.014869888,0,8,261,229,230,0.995652174,1,0.888888889,TRUE
chr3:166518806-166569633(McCarroll2008_CNP_10616),chr3,166518806,166569633,0.007462687,0,4,264,0.007434944,0,4,265,268,268,1,1,1,TRUE
chr3:186579116-186594711(McCarroll2008_CNP_10628),chr3,186579116,186594711,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr4:9876882-9889031(McCarroll2008_CNP_10664),chr4,9876882,9889031,0.009328358,0,5,263,0.005576208,0,3,266,266,268,0.992537313,1,0.6,FALSE
chr4:15364169-15382565(McCarroll2008_CNP_10671),chr4,15364169,15382565,0.009328358,0,5,263,0.00929368,0,5,264,268,268,1,1,1,TRUE
chr4:18692657-18738331(McCarroll2008_CNP_10674),chr4,18692657,18738331,0.005597015,0,3,265,0.005576208,0,3,266,268,268,1,1,1,TRUE
chr4:21652731-21684799(McCarroll2008_CNP_10679),chr4,21652731,21684799,0.003745318,0,2,265,0.003717472,0,2,267,267,267,1,1,1,TRUE
chr4:25106151-25122108(McCarroll2008_CNP_10680),chr4,25106151,25122108,0.005597015,0,3,265,0.007434944,0,4,265,267,268,0.996268657,0.75,1,FALSE
chr4:25318324-25344974(McCarroll2008_CNP_10681),chr4,25318324,25344974,0.005597015,0,3,265,0.005576208,0,3,266,268,268,1,1,1,TRUE
chr4:28246431-28344922(McCarroll2008_CNP_10684),chr4,28246431,28344922,0.003731343,0,2,266,0.003717472,0,2,267,268,268,1,1,1,TRUE
chr4:28548137-28566579(McCarroll2008_CNP_10685),chr4,28548137,28566579,0.007462687,0,4,264,0.007434944,0,4,265,268,268,1,1,1,TRUE
chr4:39375804-39394728(McCarroll2008_CNP_10695),chr4,39375804,39394728,0.005813953,0,3,255,0.005576208,0,3,266,258,258,1,1,1,TRUE
chr4:48669391-48693134(McCarroll2008_CNP_10705),chr4,48669391,48693134,0.003831418,0,2,259,0.003717472,0,2,267,261,261,1,1,1,TRUE
chr4:57946132-57958111(McCarroll2008_CNP_10709),chr4,57946132,57958111,0.023076923,0,12,248,0.024163569,0,13,256,260,260,1,1,1,TRUE
chr4:65497562-65527613(McCarroll2008_CNP_10718),chr4,65497562,65527613,0.011235955,0,6,261,0.011152416,0,6,263,267,267,1,1,1,TRUE
chr4:71257854-71288637(McCarroll2008_CNP_10734),chr4,71257854,71288637,0.007462687,0,4,264,0.007434944,0,4,265,268,268,1,1,1,TRUE
chr4:72159818-72172328(McCarroll2008_CNP_10735),chr4,72159818,72172328,0.005703422,0,3,260,0.005576208,0,3,266,263,263,1,1,1,TRUE
chr4:77996593-78011231(McCarroll2008_CNP_10743),chr4,77996593,78011231,0.014925373,0,8,260,0.014869888,0,8,261,268,268,1,1,1,TRUE
chr4:101288833-101325088(McCarroll2008_CNP_10764),chr4,101288833,101325088,0.003745318,0,2,265,0.003717472,0,2,267,267,267,1,1,1,TRUE
chr4:104956839-104985713(McCarroll2008_CNP_10767),chr4,104956839,104985713,0.005639098,0,3,263,0.005576208,0,3,266,266,266,1,1,1,TRUE
chr4:106924541-106941543(McCarroll2008_CNP_10768),chr4,106924541,106941543,0.011278195,0,6,260,0.011152416,0,6,263,266,266,1,1,1,TRUE
chr4:108280200-108299716(McCarroll2008_CNP_10769),chr4,108280200,108299716,0.017175573,0,9,253,0.016728625,0,9,260,262,262,1,1,1,TRUE
chr4:121738029-121767869(McCarroll2008_CNP_10784),chr4,121738029,121767869,0.003731343,0,2,266,0.003717472,0,2,267,268,268,1,1,1,TRUE
chr4:137573497-137588646(McCarroll2008_CNP_10794),chr4,137573497,137588646,0.007604563,0,4,259,0.007434944,0,4,265,263,263,1,1,1,TRUE
chr4:138396883-138416420(McCarroll2008_CNP_10798),chr4,138396883,138416420,0.011235955,0,6,261,0.011152416,0,6,263,267,267,1,1,1,TRUE
chr4:153005979-153019149(McCarroll2008_CNP_10814),chr4,153005979,153019149,0.041353383,0,22,244,0.040892193,0,22,247,266,266,1,1,1,TRUE
chr4:153204736-153217189(McCarroll2008_CNP_10815),chr4,153204736,153217189,0.040160643,0,20,229,0.040892193,0,22,247,249,249,1,1,1,TRUE
chr4:157183133-157197659(McCarroll2008_CNP_10824),chr4,157183133,157197659,0.011450382,1,4,257,0.011152416,1,4,264,262,262,1,1,1,TRUE
chr4:162408794-162429561(McCarroll2008_CNP_10834),chr4,162408794,162429561,0.003773585,0,2,263,0.003717472,0,2,267,261,265,0.98490566,0,0,FALSE
chr4:164168911-164181879(McCarroll2008_CNP_10836),chr4,164168911,164181879,0.007490637,0,4,263,0.007434944,0,4,265,267,267,1,1,1,TRUE
chr4:171499657-171514731(McCarroll2008_CNP_10845),chr4,171499657,171514731,0.024390244,0,12,234,0.022304833,0,12,257,246,246,1,1,1,TRUE
chr4:178438731-178457258(McCarroll2008_CNP_10849),chr4,178438731,178457258,0.009328358,0,5,263,0.00929368,0,5,264,268,268,1,1,1,TRUE
chr4:178607788-178628504(McCarroll2008_CNP_10850),chr4,178607788,178628504,0.01417004,0,7,240,0.013011152,0,7,262,247,247,1,1,1,TRUE
chr4:178700030-178728600(McCarroll2008_CNP_10851),chr4,178700030,178728600,0.003731343,0,2,266,0.003717472,0,2,267,268,268,1,1,1,TRUE
chr4:178828525-178851707(McCarroll2008_CNP_10852),chr4,178828525,178851707,0.009433962,0,5,260,0.00929368,0,5,264,265,265,1,1,1,TRUE
chr4:185392586-185409417(McCarroll2008_CNP_10858),chr4,185392586,185409417,0.003731343,0,2,266,0.003717472,0,2,267,268,268,1,1,1,TRUE
chr5:7225342-7247924(McCarroll2008_CNP_10883),chr5,7225342,7247924,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr5:19310328-19328214(McCarroll2008_CNP_10908),chr5,19310328,19328214,0.013944223,0,7,244,0.013011152,0,7,262,251,251,1,1,1,TRUE
chr5:20467958-20485059(McCarroll2008_CNP_10910),chr5,20467958,20485059,0.00929368,0,5,264,0.00929368,0,5,264,269,269,1,1,1,TRUE
chr5:26022946-26039694(McCarroll2008_CNP_10912),chr5,26022946,26039694,0.005597015,0,3,265,0.005576208,0,3,266,268,268,1,1,1,TRUE
chr5:40366232-40392303(McCarroll2008_CNP_10919),chr5,40366232,40392303,0.003745318,0,2,265,0.003717472,0,2,267,267,267,1,1,1,TRUE
chr5:41262255-41282150(McCarroll2008_CNP_10920),chr5,41262255,41282150,0.005617978,0,3,264,0.007434944,0,4,265,266,267,0.996254682,0.75,1,FALSE
chr5:41602070-41622270(McCarroll2008_CNP_10921),chr5,41602070,41622270,0.01509434,0,8,257,0.014869888,0,8,261,265,265,1,1,1,TRUE
chr5:41618028-41635861(McCarroll2008_CNP_10922),chr5,41618028,41635861,0.00754717,0,4,261,0.007434944,0,4,265,265,265,1,1,1,TRUE
chr5:98112485-98128869(McCarroll2008_CNP_10947),chr5,98112485,98128869,0.008368201,0,4,235,0.003717472,0,2,267,237,239,0.991631799,1,0.5,FALSE
chr5:106252572-106266016(McCarroll2008_CNP_10955),chr5,106252572,106266016,0.009398496,0,5,261,0.00929368,0,5,264,264,266,0.992481203,0.8,0.8,TRUE
chr5:110932230-110943944(McCarroll2008_CNP_10960),chr5,110932230,110943944,0.013257576,0,7,257,0.013011152,0,7,262,264,264,1,1,1,TRUE
chr5:114729342-114753984(McCarroll2008_CNP_10964),chr5,114729342,114753984,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr5:135324914-135367750(McCarroll2008_CNP_10975),chr5,135324914,135367750,0.003717472,0,2,267,0.003717472,0,2,267,269,269,1,1,1,TRUE
chr5:137831323-137848610(McCarroll2008_CNP_10978),chr5,137831323,137848610,0.013011152,0,7,262,0.013011152,0,7,262,267,269,0.992565056,0.857142857,0.857142857,TRUE
chr5:141993202-142005197(McCarroll2008_CNP_10981),chr5,141993202,142005197,0.005639098,0,3,263,0.005576208,0,3,266,266,266,1,1,1,TRUE
chr5:160468766-160487276(McCarroll2008_CNP_10993),chr5,160468766,160487276,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr5:163101031-163118414(McCarroll2008_CNP_10994),chr5,163101031,163118414,0.005660377,0,3,262,0.005576208,0,3,266,265,265,1,1,1,TRUE
chr6:8867510-8883097(McCarroll2008_CNP_11019),chr6,8867510,8883097,0.005576208,0,3,266,0.007434944,0,4,265,268,269,0.996282528,0.75,1,FALSE
chr6:11177288-11190184(McCarroll2008_CNP_11025),chr6,11177288,11190184,0.005769231,0,3,257,0.011152416,0,6,263,257,260,0.988461538,0.5,1,FALSE
chr6:19919839-19932883(McCarroll2008_CNP_11029),chr6,19919839,19932883,0.003717472,0,2,267,0.003717472,0,2,267,269,269,1,1,1,TRUE
chr6:21604666-21616713(McCarroll2008_CNP_11030),chr6,21604666,21616713,0.005597015,0,3,265,0.005576208,0,3,266,268,268,1,1,1,TRUE
chr6:39171890-39185010(McCarroll2008_CNP_11056),chr6,39171890,39185010,0.005681818,0,3,261,0.003717472,0,2,267,263,264,0.996212121,1,0.666666667,FALSE
chr6:52901021-52915202(McCarroll2008_CNP_11066),chr6,52901021,52915202,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr6:55929114-55956619(McCarroll2008_CNP_11070),chr6,55929114,55956619,0.011406844,0,6,257,0.011152416,0,6,263,263,263,1,1,1,TRUE
chr6:82198843-82233325(McCarroll2008_CNP_11104),chr6,82198843,82233325,0.003717472,0,2,267,0.003717472,0,2,267,269,269,1,1,1,TRUE
chr6:104091781-104105508(McCarroll2008_CNP_11118),chr6,104091781,104105508,0.009398496,0,5,261,0.00929368,0,5,264,266,266,1,1,1,TRUE
chr6:121558601-121570754(McCarroll2008_CNP_11126),chr6,121558601,121570754,0.016260163,0,8,238,0.014869888,0,8,261,246,246,1,1,1,TRUE
chr6:162411281-162428724(McCarroll2008_CNP_11162),chr6,162411281,162428724,0.013011152,0,7,262,0.013011152,0,7,262,267,269,0.992565056,0.857142857,0.857142857,TRUE
chr6:162653558-162665430(McCarroll2008_CNP_11164),chr6,162653558,162665430,0.01119403,0,6,262,0.011152416,0,6,263,268,268,1,1,1,TRUE
chr6:169244708-169265860(McCarroll2008_CNP_11171),chr6,169244708,169265860,0.00929368,0,5,264,0.00929368,0,5,264,269,269,1,1,1,TRUE
chr7:9088698-9201410(McCarroll2008_CNP_11185),chr7,9088698,9201410,0.003731343,0,2,266,0.003717472,0,2,267,268,268,1,1,1,TRUE
chr7:16310368-16373639(McCarroll2008_CNP_11196),chr7,16310368,16373639,0.007462687,0,4,264,0.007434944,0,4,265,268,268,1,1,1,TRUE
chr7:24263696-24284556(McCarroll2008_CNP_11205),chr7,24263696,24284556,0.007518797,0,4,262,0.007434944,0,4,265,266,266,1,1,1,TRUE
chr7:34861102-34884011(McCarroll2008_CNP_11213),chr7,34861102,34884011,0.024096386,0,12,237,0.022304833,0,12,257,249,249,1,1,1,TRUE
chr7:53176505-53191117(McCarroll2008_CNP_11226),chr7,53176505,53191117,0.015209125,0,8,255,0.014869888,0,8,261,263,263,1,1,1,TRUE
chr7:54147898-54163714(McCarroll2008_CNP_11228),chr7,54147898,54163714,0.007462687,0,4,264,0.007434944,0,4,265,268,268,1,1,1,TRUE
chr7:92826876-92840589(McCarroll2008_CNP_11251),chr7,92826876,92840589,0.008298755,0,4,237,0.007434944,0,4,265,241,241,1,1,1,TRUE
chr7:112296356-112310297(McCarroll2008_CNP_11275),chr7,112296356,112310297,0.025291829,0,13,244,0.024163569,0,13,256,257,257,1,1,1,TRUE
chr7:117917977-117953608(McCarroll2008_CNP_11278),chr7,117917977,117953608,0.007518797,0,4,262,0.00929368,0,5,264,266,266,1,1,1,TRUE
chr7:120944223-120978529(McCarroll2008_CNP_11283),chr7,120944223,120978529,0.005703422,0,3,260,0.007434944,0,4,265,262,263,0.996197719,0.75,1,FALSE
chr7:131423987-131435799(McCarroll2008_CNP_11290),chr7,131423987,131435799,0.005617978,0,3,264,0.007434944,0,4,265,266,267,0.996254682,0.75,1,FALSE
chr7:139834330-139850481(McCarroll2008_CNP_11299),chr7,139834330,139850481,0.01532567,0,8,253,0.020446097,0,11,258,261,261,1,1,1,TRUE
chr7:141964866-142010164(McCarroll2008_CNP_11309),chr7,141964866,142010164,0.005597015,0,3,265,0.005576208,0,3,266,268,268,1,1,1,TRUE
chr7:154510932-154525474(McCarroll2008_CNP_11333),chr7,154510932,154525474,0.009328358,0,5,263,0.00929368,0,5,264,268,268,1,1,1,TRUE
chr7:155986370-156008709(McCarroll2008_CNP_11336),chr7,155986370,156008709,0.007462687,0,4,264,0.00929368,0,5,264,267,268,0.996268657,0.8,1,TRUE
chr7:158805402-158817015(McCarroll2008_CNP_11339),chr7,158805402,158817015,0.007874016,0,4,250,0.007434944,0,4,265,254,254,1,1,1,TRUE
chr8:6045901-6061171(McCarroll2008_CNP_11371),chr8,6045901,6061171,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr8:6160713-6192827(McCarroll2008_CNP_11373),chr8,6160713,6192827,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr8:9088876-9104936(McCarroll2008_CNP_11395),chr8,9088876,9104936,0.011152416,0,6,263,0.011152416,0,6,263,269,269,1,1,1,TRUE
chr8:13715460-13745957(McCarroll2008_CNP_11419),chr8,13715460,13745957,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr8:14548275-14564579(McCarroll2008_CNP_11421),chr8,14548275,14564579,0.007462687,0,4,264,0.007434944,0,4,265,268,268,1,1,1,TRUE
chr8:14827796-14845174(McCarroll2008_CNP_11424),chr8,14827796,14845174,0.007490637,0,4,263,0.00929368,0,5,264,266,267,0.996254682,0.8,1,TRUE
chr8:18890819-18908101(McCarroll2008_CNP_11435),chr8,18890819,18908101,0.007434944,0,4,265,0.00929368,0,5,264,268,269,0.996282528,0.8,1,TRUE
chr8:54117300-54159739(McCarroll2008_CNP_11463),chr8,54117300,54159739,0.00929368,0,5,264,0.00929368,0,5,264,269,269,1,1,1,TRUE
chr8:58515879-58534512(McCarroll2008_CNP_11469),chr8,58515879,58534512,0.017045455,0,9,255,0.016728625,0,9,260,264,264,1,1,1,TRUE
chr8:65404538-65425057(McCarroll2008_CNP_11474),chr8,65404538,65425057,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr8:102052367-102066693(McCarroll2008_CNP_11497),chr8,102052367,102066693,0.009615385,0,5,255,0.011152416,0,6,263,259,260,0.996153846,0.833333333,1,TRUE
chr8:107922695-107936446(McCarroll2008_CNP_11501),chr8,107922695,107936446,0.01744186,0,9,249,0.018587361,0,10,259,257,258,0.996124031,0.9,1,TRUE
chr8:115217742-115284466(McCarroll2008_CNP_11506),chr8,115217742,115284466,0.003745318,0,2,265,0.003717472,0,2,267,267,267,1,1,1,TRUE
chr8:117694864-117707442(McCarroll2008_CNP_11510),chr8,117694864,117707442,0.00929368,0,5,264,0.011152416,0,6,263,268,269,0.996282528,0.833333333,1,TRUE
chr8:142921302-142936358(McCarroll2008_CNP_11530),chr8,142921302,142936358,0.005617978,0,3,264,0.003717472,0,2,267,266,267,0.996254682,1,0.666666667,FALSE
chr9:5296567-5332707(McCarroll2008_CNP_11545),chr9,5296567,5332707,0.007518797,0,4,262,0.007434944,0,4,265,266,266,1,1,1,TRUE
chr9:5370779-5393011(McCarroll2008_CNP_11546),chr9,5370779,5393011,0.003759398,0,2,264,0.003717472,0,2,267,266,266,1,1,1,TRUE
chr9:10526175-10578273(McCarroll2008_CNP_11556),chr9,10526175,10578273,0.003745318,0,2,265,0.007434944,0,4,265,265,267,0.992509363,0.5,1,FALSE
chr9:11926913-11947799(McCarroll2008_CNP_11562),chr9,11926913,11947799,0.011235955,0,6,261,0.00929368,0,5,264,266,267,0.996254682,1,0.833333333,TRUE
chr9:20786650-20799674(McCarroll2008_CNP_11571),chr9,20786650,20799674,0.009469697,0,5,259,0.00929368,0,5,264,264,264,1,1,1,TRUE
chr9:24482680-24503238(McCarroll2008_CNP_11577),chr9,24482680,24503238,0.016981132,0,9,256,0.016728625,0,9,260,263,265,0.99245283,0.888888889,0.888888889,TRUE
chr9:26552699-26567239(McCarroll2008_CNP_11579),chr9,26552699,26567239,0.003745318,0,2,265,0.003717472,0,2,267,267,267,1,1,1,TRUE
chr9:72687075-72702041(McCarroll2008_CNP_11625),chr9,72687075,72702041,0.005639098,0,3,263,0.005576208,0,3,266,266,266,1,1,1,TRUE
chr9:75252832-75273983(McCarroll2008_CNP_11629),chr9,75252832,75273983,0.005660377,0,3,262,0.007434944,0,4,265,264,265,0.996226415,0.75,1,FALSE
chr9:80623360-80663853(McCarroll2008_CNP_11633),chr9,80623360,80663853,0.00754717,0,4,261,0.007434944,0,4,265,265,265,1,1,1,TRUE
chr9:113059716-113076390(McCarroll2008_CNP_11653),chr9,113059716,113076390,0.005660377,0,3,262,0.007434944,0,4,265,265,265,1,1,1,TRUE
chr9:135113363-135127692(McCarroll2008_CNP_11661),chr9,135113363,135127692,0.009615385,0,5,255,0.00929368,0,5,264,260,260,1,1,1,TRUE
chr10:118551-138255(McCarroll2008_CNP_11664),chr10,118551,138255,0.005639098,0,3,263,0.007434944,0,4,265,265,266,0.996240602,0.75,1,FALSE
chr10:6692781-6709159(McCarroll2008_CNP_11673),chr10,6692781,6709159,0.007462687,0,4,264,0.007434944,0,4,265,268,268,1,1,1,TRUE
chr10:28599766-28614676(McCarroll2008_CNP_11698),chr10,28599766,28614676,0.007462687,0,4,264,0.007434944,0,4,265,266,268,0.992537313,0.75,0.75,FALSE
chr10:54784051-54817107(McCarroll2008_CNP_11726),chr10,54784051,54817107,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr10:56844158-56857828(McCarroll2008_CNP_11734),chr10,56844158,56857828,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr10:58511320-58524894(McCarroll2008_CNP_11737),chr10,58511320,58524894,0.022900763,0,12,250,0.022304833,0,12,257,262,262,1,1,1,TRUE
chr10:66100900-66114037(McCarroll2008_CNP_11746),chr10,66100900,66114037,0.007490637,0,4,263,0.007434944,0,4,265,267,267,1,1,1,TRUE
chr10:67939731-67953321(McCarroll2008_CNP_11755),chr10,67939731,67953321,0.005660377,0,3,262,0.007434944,0,4,265,264,265,0.996226415,0.75,1,FALSE
chr10:70277650-70297123(McCarroll2008_CNP_11757),chr10,70277650,70297123,0.00929368,0,5,264,0.00929368,0,5,264,269,269,1,1,1,TRUE
chr10:82866310-82884763(McCarroll2008_CNP_11770),chr10,82866310,82884763,0.007462687,0,4,264,0.007434944,0,4,265,268,268,1,1,1,TRUE
chr10:90927947-90943070(McCarroll2008_CNP_11780),chr10,90927947,90943070,0.022556391,0,12,254,0.022304833,0,12,257,266,266,1,1,1,TRUE
chr10:94148462-94165827(McCarroll2008_CNP_11784),chr10,94148462,94165827,0.011904762,0,6,246,0.011152416,0,6,263,252,252,1,1,1,TRUE
chr10:102340103-102357103(McCarroll2008_CNP_11788),chr10,102340103,102357103,0.007518797,0,4,262,0.007434944,0,4,265,266,266,1,1,1,TRUE
chr10:122755653-122771583(McCarroll2008_CNP_11795),chr10,122755653,122771583,0.023404255,0,11,224,0.048327138,2,22,245,233,235,0.991489362,0.916666667,1,TRUE
chr10:133492123-133513705(McCarroll2008_CNP_11807),chr10,133492123,133513705,0.013011152,0,7,262,0.014869888,0,8,261,266,269,0.988847584,0.75,0.857142857,FALSE
chr11:4461713-4523969(McCarroll2008_CNP_11816),chr11,4461713,4523969,0.003717472,0,2,267,0.003717472,0,2,267,269,269,1,1,1,TRUE
chr11:25085419-25255126(McCarroll2008_CNP_11850),chr11,25085419,25255126,0.005576208,0,3,266,0.007434944,0,4,265,268,269,0.996282528,0.75,1,FALSE
chr11:25379338-25395482(McCarroll2008_CNP_11851),chr11,25379338,25395482,0.007604563,0,4,259,0.007434944,0,4,265,263,263,1,1,1,TRUE
chr11:38409524-38424763(McCarroll2008_CNP_11862),chr11,38409524,38424763,0.00929368,0,5,264,0.00929368,0,5,264,269,269,1,1,1,TRUE
chr11:49259380-49322267(McCarroll2008_CNP_11869),chr11,49259380,49322267,0.005597015,0,3,265,0.005576208,0,3,266,268,268,1,1,1,TRUE
chr11:80545138-80561840(McCarroll2008_CNP_11899),chr11,80545138,80561840,0.003717472,0,2,267,0.003717472,0,2,267,269,269,1,1,1,TRUE
chr11:104550015-104577108(McCarroll2008_CNP_11920),chr11,104550015,104577108,0.007490637,0,4,263,0.00929368,0,5,264,266,267,0.996254682,0.8,1,TRUE
chr11:106838163-106857442(McCarroll2008_CNP_11925),chr11,106838163,106857442,0.005576208,0,3,266,0.007434944,0,4,265,268,269,0.996282528,0.75,1,FALSE
chr12:9748345-9771191(McCarroll2008_CNP_11953),chr12,9748345,9771191,0.003731343,0,2,266,0.003717472,0,2,267,268,268,1,1,1,TRUE
chr12:15454186-15469906(McCarroll2008_CNP_11960),chr12,15454186,15469906,0.022641509,0,12,253,0.022304833,0,12,257,265,265,1,1,1,TRUE
chr12:17476711-17496817(McCarroll2008_CNP_11961),chr12,17476711,17496817,0.007604563,0,4,259,0.007434944,0,4,265,263,263,1,1,1,TRUE
chr12:31786817-31806173(McCarroll2008_CNP_11977),chr12,31786817,31806173,0.003745318,0,2,265,0.046468401,1,23,245,245,267,0.917602996,0.083333333,1,FALSE
chr12:38584773-38606293(McCarroll2008_CNP_11992),chr12,38584773,38606293,0.005617978,0,3,264,0.005576208,0,3,266,267,267,1,1,1,TRUE
chr12:60483837-60502087(McCarroll2008_CNP_12001),chr12,60483837,60502087,0.019379845,1,8,249,0.018587361,1,8,260,258,258,1,1,1,TRUE
chr12:62682505-62696702(McCarroll2008_CNP_12003),chr12,62682505,62696702,0.003802281,0,2,261,0.003717472,0,2,267,263,263,1,1,1,TRUE
chr12:79344306-79357242(McCarroll2008_CNP_12014),chr12,79344306,79357242,0.009765625,1,3,252,0.011152416,1,4,264,256,256,1,1,1,TRUE
chr12:85932514-85955402(McCarroll2008_CNP_12018),chr12,85932514,85955402,0.005660377,0,3,262,0.007434944,0,4,265,264,265,0.996226415,0.75,1,FALSE
chr12:118468270-118480144(McCarroll2008_CNP_12035),chr12,118468270,118480144,0.003759398,0,2,264,0.003717472,0,2,267,266,266,1,1,1,TRUE
chr12:120015329-120027886(McCarroll2008_CNP_12037),chr12,120015329,120027886,0.003831418,0,2,259,0.003717472,0,2,267,261,261,1,1,1,TRUE
chr12:126153640-126175328(McCarroll2008_CNP_12043),chr12,126153640,126175328,0.005639098,0,3,263,0.005576208,0,3,266,266,266,1,1,1,TRUE
chr12:127791462-127803498(McCarroll2008_CNP_12046),chr12,127791462,127803498,0.013257576,0,7,257,0.014869888,0,8,261,264,264,1,1,1,TRUE
chr12:128619510-128631094(McCarroll2008_CNP_12049),chr12,128619510,128631094,0.009803922,0,5,250,0.003717472,0,2,267,248,255,0.97254902,0,0,FALSE
chr13:22438593-22456522(McCarroll2008_CNP_12062),chr13,22438593,22456522,0.005576208,0,3,266,0.003717472,0,2,267,268,269,0.996282528,1,0.666666667,FALSE
chr13:42098086-42128720(McCarroll2008_CNP_12076),chr13,42098086,42128720,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr13:57483282-57500029(McCarroll2008_CNP_12085),chr13,57483282,57500029,0.022900763,0,12,250,0.022304833,0,12,257,262,262,1,1,1,TRUE
chr13:62211545-62532158(McCarroll2008_CNP_12088),chr13,62211545,62532158,0.003717472,0,2,267,0.003717472,0,2,267,269,269,1,1,1,TRUE
chr13:69635329-69675896(McCarroll2008_CNP_12104),chr13,69635329,69675896,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr13:70309510-70333585(McCarroll2008_CNP_12106),chr13,70309510,70333585,0.003717472,0,2,267,0.003717472,0,2,267,269,269,1,1,1,TRUE
chr13:75504750-75515848(McCarroll2008_CNP_12108),chr13,75504750,75515848,0.007692308,0,4,256,0.007434944,0,4,265,260,260,1,1,1,TRUE
chr13:78096102-78110643(McCarroll2008_CNP_12110),chr13,78096102,78110643,0.009803922,0,5,250,0.011152416,0,6,263,255,255,1,1,1,TRUE
chr13:82816536-82830906(McCarroll2008_CNP_12113),chr13,82816536,82830906,0.007843137,0,4,251,0.007434944,0,4,265,255,255,1,1,1,TRUE
chr13:84441480-84458972(McCarroll2008_CNP_12116),chr13,84441480,84458972,0.003717472,0,2,267,0.003717472,0,2,267,269,269,1,1,1,TRUE
chr14:25827761-25854239(McCarroll2008_CNP_12152),chr14,25827761,25854239,0.003731343,0,2,266,0.003717472,0,2,267,268,268,1,1,1,TRUE
chr14:27733124-27745489(McCarroll2008_CNP_12153),chr14,27733124,27745489,0.020080321,0,10,239,0.018587361,0,10,259,249,249,1,1,1,TRUE
chr14:35736780-35749784(McCarroll2008_CNP_12155),chr14,35736780,35749784,0.013307985,0,7,256,0.014869888,0,8,261,263,263,1,1,1,TRUE
chr14:40536848-40560277(McCarroll2008_CNP_12158),chr14,40536848,40560277,0.003745318,0,2,265,0.003717472,0,2,267,267,267,1,1,1,TRUE
chr14:40880215-40932856(McCarroll2008_CNP_12161),chr14,40880215,40932856,0.003731343,0,2,266,0.003717472,0,2,267,268,268,1,1,1,TRUE
chr14:41931937-42035401(McCarroll2008_CNP_12162),chr14,41931937,42035401,0.003731343,0,2,266,0.007434944,0,4,265,266,268,0.992537313,0.5,1,FALSE
chr14:44890806-45090468(McCarroll2008_CNP_12167),chr14,44890806,45090468,0.005597015,0,3,265,0.005576208,0,3,266,268,268,1,1,1,TRUE
chr14:60896611-60914127(McCarroll2008_CNP_12175),chr14,60896611,60914127,0.009615385,0,5,255,0.00929368,0,5,264,260,260,1,1,1,TRUE
chr14:61720259-61739091(McCarroll2008_CNP_12177),chr14,61720259,61739091,0.005703422,0,3,260,0.005576208,0,3,266,263,263,1,1,1,TRUE
chr14:85351069-85386922(McCarroll2008_CNP_12198),chr14,85351069,85386922,0.005597015,0,3,265,0.005576208,0,3,266,268,268,1,1,1,TRUE
chr14:85525379-85563194(McCarroll2008_CNP_12199),chr14,85525379,85563194,0.003731343,0,2,266,0.003717472,0,2,267,268,268,1,1,1,TRUE
chr14:87463124-87497318(McCarroll2008_CNP_12200),chr14,87463124,87497318,0.003731343,0,2,266,0.003717472,0,2,267,268,268,1,1,1,TRUE
chr14:92904950-92929155(McCarroll2008_CNP_12205),chr14,92904950,92929155,0.003875969,0,2,256,0.003717472,0,2,267,258,258,1,1,1,TRUE
chr15:18410652-18459752(McCarroll2008_CNP_12257),chr15,18410652,18459752,0.011152416,0,6,263,0.011152416,0,6,263,269,269,1,1,1,TRUE
chr15:20654585-20680140(McCarroll2008_CNP_12278),chr15,20654585,20680140,0.039823009,0,18,208,0.035315985,0,19,250,226,226,1,1,1,TRUE
chr15:21804024-21831358(McCarroll2008_CNP_12281),chr15,21804024,21831358,0.005597015,0,3,265,0.005576208,0,3,266,268,268,1,1,1,TRUE
chr15:21932718-21990625(McCarroll2008_CNP_12282),chr15,21932718,21990625,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr15:22615644-22640939(McCarroll2008_CNP_12293),chr15,22615644,22640939,0.007434944,1,2,266,0.007434944,1,2,266,269,269,1,1,1,TRUE
chr15:22967700-22986332(McCarroll2008_CNP_12294),chr15,22967700,22986332,0.009328358,0,5,263,0.011152416,0,6,263,267,268,0.996268657,0.833333333,1,TRUE
chr15:31688757-31701262(McCarroll2008_CNP_12309),chr15,31688757,31701262,0.009328358,0,5,263,0.00929368,0,5,264,268,268,1,1,1,TRUE
chr15:40203707-40226098(McCarroll2008_CNP_12317),chr15,40203707,40226098,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr15:47434816-47476374(McCarroll2008_CNP_12331),chr15,47434816,47476374,0.003773585,0,2,263,0.007434944,0,4,265,263,265,0.99245283,0.5,1,FALSE
chr15:50048027-50065576(McCarroll2008_CNP_12332),chr15,50048027,50065576,0.006,0,3,247,0.005576208,0,3,266,250,250,1,1,1,TRUE
chr15:60243389-60259287(McCarroll2008_CNP_12340),chr15,60243389,60259287,0.007518797,0,4,262,0.005576208,0,3,266,259,266,0.973684211,0,0,FALSE
chr15:77330797-77345887(McCarroll2008_CNP_12346),chr15,77330797,77345887,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr15:84137284-84156045(McCarroll2008_CNP_12349),chr15,84137284,84156045,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr15:85702205-85716226(McCarroll2008_CNP_12352),chr15,85702205,85716226,0.009328358,0,5,263,0.00929368,0,5,264,268,268,1,1,1,TRUE
chr15:95613796-95638187(McCarroll2008_CNP_12363),chr15,95613796,95638187,0.026923077,0,14,246,0.026022305,0,14,255,260,260,1,1,1,TRUE
chr16:15974352-15990377(McCarroll2008_CNP_12389),chr16,15974352,15990377,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr16:58635103-58659487(McCarroll2008_CNP_12448),chr16,58635103,58659487,0.009505703,0,5,258,0.011152416,0,6,263,262,263,0.996197719,0.833333333,1,TRUE
chr16:62631133-62676716(McCarroll2008_CNP_12450),chr16,62631133,62676716,0.005597015,0,3,265,0.005576208,0,3,266,268,268,1,1,1,TRUE
chr16:77314838-77332934(McCarroll2008_CNP_12469),chr16,77314838,77332934,0.007462687,0,4,264,0.00929368,0,5,264,267,268,0.996268657,0.8,1,TRUE
chr16:79455358-79476170(McCarroll2008_CNP_12473),chr16,79455358,79476170,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr17:6042214-6078498(McCarroll2008_CNP_12487),chr17,6042214,6078498,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr17:15612726-15640510(McCarroll2008_CNP_12494),chr17,15612726,15640510,0.009328358,0,5,263,0.014869888,0,8,261,265,268,0.98880597,0.625,1,FALSE
chr17:22763399-22786620(McCarroll2008_CNP_12504),chr17,22763399,22786620,0.022900763,0,12,250,0.024163569,0,13,256,261,262,0.996183206,0.923076923,1,TRUE
chr17:51510913-51532586(McCarroll2008_CNP_12531),chr17,51510913,51532586,0.014925373,0,8,260,0.016728625,0,9,260,268,268,1,1,1,TRUE
chr17:69252574-69264206(McCarroll2008_CNP_12535),chr17,69252574,69264206,0.003717472,0,2,267,0.003717472,0,2,267,269,269,1,1,1,TRUE
chr18:278522-299262(McCarroll2008_CNP_12546),chr18,278522,299262,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr18:18303209-18324975(McCarroll2008_CNP_12557),chr18,18303209,18324975,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr18:39130060-39162329(McCarroll2008_CNP_12574),chr18,39130060,39162329,0.003731343,0,2,266,0.005576208,0,3,266,267,268,0.996268657,0.666666667,1,FALSE
chr18:40014717-40035582(McCarroll2008_CNP_12575),chr18,40014717,40035582,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr18:54076846-54091942(McCarroll2008_CNP_12587),chr18,54076846,54091942,0.00929368,0,5,264,0.00929368,0,5,264,269,269,1,1,1,TRUE
chr18:61783030-61796107(McCarroll2008_CNP_12599),chr18,61783030,61796107,0.015209125,0,8,255,0.016728625,0,9,260,262,263,0.996197719,0.888888889,1,TRUE
chr18:65353832-65373255(McCarroll2008_CNP_12610),chr18,65353832,65373255,0.026217228,1,12,254,0.026022305,1,12,256,267,267,1,1,1,TRUE
chr19:14771641-14788883(McCarroll2008_CNP_12622),chr19,14771641,14788883,0.007874016,0,4,250,0.00929368,0,5,264,254,254,1,1,1,TRUE
chr19:22320358-22363984(McCarroll2008_CNP_12635),chr19,22320358,22363984,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr19:46138504-46210185(McCarroll2008_CNP_12657),chr19,46138504,46210185,0.007434944,0,4,265,0.007434944,0,4,265,269,269,1,1,1,TRUE
chr19:46663500-46704711(McCarroll2008_CNP_12658),chr19,46663500,46704711,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr19:49583238-49635631(McCarroll2008_CNP_12669),chr19,49583238,49635631,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr19:53876228-53902953(McCarroll2008_CNP_12674),chr19,53876228,53902953,0.005597015,0,3,265,0.011152416,0,6,263,265,268,0.98880597,0.5,1,FALSE
chr19:61400760-61419571(McCarroll2008_CNP_12697),chr19,61400760,61419571,0.020754717,0,11,254,0.024163569,0,13,256,263,265,0.99245283,0.846153846,1,TRUE
chr19:61546396-61561644(McCarroll2008_CNP_12698),chr19,61546396,61561644,0.003731343,0,2,266,0.072490706,3,33,233,230,268,0.858208955,0,0,FALSE
chr19:61891070-61908319(McCarroll2008_CNP_12699),chr19,61891070,61908319,0.015936255,0,8,243,0.018587361,0,10,259,251,251,1,1,1,TRUE
chr19:62160323-62176290(McCarroll2008_CNP_12700),chr19,62160323,62176290,0.007518797,0,4,262,0.007434944,0,4,265,266,266,1,1,1,TRUE
chr20:14371080-14395471(McCarroll2008_CNP_12719),chr20,14371080,14395471,0.009541985,0,5,257,0.024163569,0,13,256,254,262,0.969465649,0.384615385,1,FALSE
chr20:16511058-16539634(McCarroll2008_CNP_12724),chr20,16511058,16539634,0.005576208,0,3,266,0.005576208,0,3,266,269,269,1,1,1,TRUE
chr20:52076215-52097058(McCarroll2008_CNP_12740),chr20,52076215,52097058,0.01119403,0,6,262,0.011152416,0,6,263,268,268,1,1,1,TRUE
chr20:58542104-58561092(McCarroll2008_CNP_12742),chr20,58542104,58561092,0.009328358,0,5,263,0.013011152,0,7,262,266,268,0.992537313,0.714285714,1,FALSE
chr21:20717523-20762493(McCarroll2008_CNP_12758),chr21,20717523,20762493,0.007462687,0,4,264,0.007434944,0,4,265,268,268,1,1,1,TRUE
chr21:23093732-23137654(McCarroll2008_CNP_12762),chr21,23093732,23137654,0.007490637,0,4,263,0.007434944,0,4,265,267,267,1,1,1,TRUE
chr22:17001129-17014149(McCarroll2008_CNP_12788),chr22,17001129,17014149,0.018656716,0,10,258,0.018587361,0,10,259,268,268,1,1,1,TRUE
chrX:16382145-16387877(McCarroll2008_CNP_2604),chrX,16382145,16387877,0.277153558,2,144,121,,2,146,121,266,267,0.996254682,,,TRUE
chrX:76053855-76057477(McCarroll2008_CNP_2648),chrX,76053855,76057477,0.270522388,1,143,124,,1,142,126,264,268,0.985074627,,,TRUE
chrX:81283429-81298800(McCarroll2008_CNP_2654),chrX,81283429,81298800,0.277153558,2,144,121,,2,145,122,266,267,0.996254682,,,TRUE
chrX:109825336-109826953(McCarroll2008_CNP_2675),chrX,109825336,109826953,0.277153558,3,142,122,,3,146,120,265,267,0.992509363,,,TRUE
chrX:146651390-146655904(McCarroll2008_CNP_2704),chrX,146651390,146655904,0.276119403,2,144,122,,2,146,121,267,268,0.996268657,,,TRUE
chrX:148452463-148462404(McCarroll2008_CNP_2706),chrX,148452463,148462404,0.285447761,5,143,120,,5,144,120,266,268,0.992537313,,,TRUE