The Genome of the Amoeba Symbiont "Candidatus Amoebophilus asiaticus" Reveals Common Mechanisms for Host Cell Interaction among Amoeba-Associated Bacteria
J. Bacteriol. Schmitz-Esser et al. 192: 1045
Supplemental material
Files in this Data Supplement:
- Supplemental file 1 - Table S1, transport proteins identified in the A. asiaticus genome; Tables S2 to S6, A. asiaticus proteins containing leucine-rich repeats, TPR and SEL1 repeats, ankyrin repeats, a U-box domain, and an F-box domain; Table S7, distribution of proteins with eukaryotic domains among selected genomes; Table S8, InterPro database proteins containing more than 30 ankyrin repeats per protein; Table S9, genome sequences of amoeba-associated bacteria; Tables S10 to S12, enrichment of functional domains; Table S13, A. asiaticus candidate genes for horizontal gene transfer
Zipped PDF file, 213K. - Supplemental file 2 - Fig. S1, A. asiaticus genome; Fig. S2, COG classification of proteins; Fig. S3, alignment of proteases; Fig. S4, transcription of Aasi_0770 and Aasi_1805; Fig. S5, alignment of patatin-like proteins; Fig. S6, structure of proteins with similarity to toxin complex-like toxins; Fig. S7, structure of the region surrounding the Lasso peptide synthesis cluster; Fig. S8, structure of the genomic region surrounding the ATP/ADP translocase; Fig. S9, phylogenetic relationships of candidate genes for horizontal gene transfer
Zipped PDF file, 288K. - Supplemental file 3 - Supplemental text
Zipped PDF file, 20K.