Diversity, Abundance, and Spatial Distribution of Sediment Ammonia-Oxidizing Betaproteobacteria in Response to Environmental Gradients and Coastal Eutrophication in Jiaozhou Bay, China
Appl. Environ. Microbiol. Dang et al. 76: 4691

Supplemental material

Files in this Data Supplement:

  • Supplemental file 1 - Rarefaction curves for the AmoA OTUs of the eight clone libraries constructed with the sediment samples collected from the Jiaozhou Bay (Fig. S1).
    Zipped TIF Image file, 12K.
  • Supplemental file 2 - Phylogenetic tree of the AmoA clusters affiliated with the Nitrosospira lineage, constructed from an alignment of sequences from Jiaozhou Bay and other previously established clusters (Fig. S2).
    Zipped TIF Image file, 79K.
  • Supplemental file 3 - Plot of the first two principal coordinate axes of the PCoA and the distribution of the AmoA genotype assemblages in response to these axes (Fig. S3).
    Zipped TIF Image file, 12K.
  • Supplemental file 4 - Environment hierarchical clustering dendrogram constructed using Euclidean distance and Ward linkage of the Jiaozhou Bay sedimentological parameters (Fig. S4).
    Zipped TIF Image file, 6K.
  • Supplemental file 5 - Legends to supplemental figures.
    Zipped PDF file, 29K.
  • Supplemental file 6 - Efficiency and sensitivity of individual qPCR standard curve determined via plasmid DNA (Table S1) and world distribution of Nitrosomonas oligotropha lineage AOB in estuarine and coastal environments (Table S2).
    Zipped PDF file, 39K.