Table S11. Coordinates (hg17) and primers used to amplify regions containing predicted enhancers in HeLa (H1-H9) and K562 (K1-K9) cells for cloning and reporter assays, as well as random regions selected as controls (R1-R10).

Enhancer ID		Chromosomal Location (Hg17)	Left Primer	Right Primer	Active (P < 1%)
					
Random	R1	chr10:66880252-66881251	CTGCCCAGGAAACACAAAAT	TGGCATGAGTCTCAACAAGG	No
	R2	chr11:41402448-41403447	TGACATGGTTTGTGGCTTGT	TAGACGGAGGTCTTGCCAAC	No
	R3	chr12:125703599-125704598	CCCAGTGTCTGTGGTCATTG	TGACCAAATGCACTTTCTGC	No
	R4	chr21:19996324-19997323	TCAATTTCCAGTTGGCTTCC	TTGCGTGCTTTGGTGTCTAT	No
	R5	chr3:165054540-165055539	TGAAGCAACCAGTGAAACCA	CCTGCTTAGGCTTTTGTTGC	No
	R6	chr4:59799610-59800609	GGGGAAACTTGGTCCTAAGC	CAGCACAACCAGCAAGTGTT	No
	R7	chr14:83695494-83696493	CAAAGCGAGGCAAAAACAAT	TTTGCCAGAATTACCTGAGTTG	No
	R8	chr2:125537487-125538486	TCCACGATAGCTGGTGACTG	TTGAGTGTGGAAGCTCATGG	No
	R9	chr3:83292230-83293229	GCTTTCAAGCATGTTTCACG	TCTTCCTGCTTTTCCTCTGC	No
	R10	chr5:18441221-18442220	TGGAAGGCTTTTGGCTCTTA	CAAGAGGCCCAAGAGAAGAA	No
					
					
HeLa-Specific	H1	chr1:222249552-222251133	TACACCTGGTCACCAAGCAA	CCAGTGGTGCTGGAGGTAAT	Yes
	H2	chr17:76107151-76108600	TGTTGGGTGGGTCCCTATTA	AGCCTCCTCAGCCTCACTCT	Yes
	H3	chr3:12460699-12462100	CAAATACGGTGACTGTCCTTCA	GATGGAGGTGGGCAGTGAT	Yes
	H4	chr21:39314751-39316050	GCTTCCCTCTTCCCTTCAAC	GTTGCCAAGCATGTGAATGA	Yes
	H5	chr16:4914351-4915550	ATGTCACGGGGCCAGTAAT	TTAAGAGCCCCAGTAACACTAAGG	No
	H6	chr22:26195364-26196450	GCTTCCTTCAGCTCCCTTG	AGGGCACAGAGAGGCAGAT	No
	H7	chr18:19553351-19554300	GCTCCAAGGTTAAATGTAATAGGG	AAATGTTGCAGAGAGACTCAAGTG	Yes
	H8	chr20:55780621-55781450	GCAGGGTCTTGCAGAACAG	CCTTTAAGTTTCTTGCACTGGA	Yes
	H9	chr10:128075851-128077369	CAGTGTGTGCAACCACGTT	GTGACAGAAAACAAATGCTCCT	Yes
					
					
K562-Specific	K1	chr16:20665043-20666000	CAGTCAACATGTGCTTAAAAACAGC	TCTCAAAGGAGTGGGAAGGAA	No
	K2	chr8:38110846-38111845	TAGTGGCCTGTTGGGAAATC	TTAAAGTAAGCTGGCCTTCCA	Yes
	K3	chr16:23739868-23740868	ACTGTAGGGTGGTTTTTAATGTAGC	TCAAGCAAATGAAGGGGAAA	Yes
	K4	chr16:132622-133650	CCAGTAACCCTGGCACTCAT	GGTGTCCACTGGTGGTTTCT	No
	K5	chr12:7166351-7167590	GGGGCCTACAAGTTCCTGAG	GGGGCTACTGGCAGAGTCTT	No
	K6	chr20:57022250-57023500	TGCTGCTTTCACCCTCTAAG	AGCAGTGCCTGCATTTAGGT	No
	K7	chr4:145284959-145286250	TGTGTTTGGCTCATCTCACAG	GCTTCCTGAAGGGAAGCTG	No
	K8	chr5:126333651-126335000	TGTCCACTTAGGAAAGTGTCTTGA	GCAAGCATTCTACTTCTCTCCAA	No
	K9	chr8:91274651-91276001	TCTGAGTACCAAAGGCTTGAAA	AATCCACAGGCAAAGTCACTG	No