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Domain name : PF01105.16_EMP24_GP25L
Domain size : 167
Domain Description : emp24/gp25L/p24 family/GOLD
Domain gathering score : -16.0000
Domain trusted cutoff : -15.4000
Domain architecture : non-TM/SP [1 314], TM [315 346]
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Example 1
gi|147773092|emb|CAN62859.1| hypothetical protein [Vitis vinifera] 1181 (length) 1018 1173 .. (wrt seq) 1 167 [] (wrt HMM) 
No.of residues in non-TM/SP region : 274 [87%(over non-TM/SP length)]

Scores for sequence family classification:
Model        Description                                Score    E-value  N
--------     -----------                                -----    ------- ---
Cellulose_synt  Cellulose synthase                      246.8    5.2e-71   1
EMP24_GP25L     emp24/gp25L/p24 family/GOLD              56.7      9e-14   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
Cellulose_synt    1/1     295   989 ..     1   898 []   246.8  5.2e-71
EMP24_GP25L       1/1    1018  1173 ..     1   167 []    56.7    9e-14

Alignments of top-scoring domains:
Cellulose_synt: domain 1 of 1, from 295 to 989: score 246.8, E = 5.2e-71
                   *->pLsrkvpIpsskispYRllIvlRLviLclFlkyRitnPvedAlwLWl
                           vp+ ++         +   v+  +     i  P ed  w W 
  gi|1477730   295    TVMLHVPVYEALFVRNDKGQIPSSVMFKV-----IHIPTEDGRWGWI 336  

                   lSviCEiWFAlSWiLDqlPKlfPinReTyLdrLslrferegesnPtGrsd
                        E+WF+l W+  q  +++Pi R+T  drLs+r+e+           
  gi|1477730   337 GLLLAELWFGLYWLXTQASRWNPIYRSTFKDRLSQRYEK----------X 376  

                   LagvDvFVSTvDPlKEPPLvTANTvLSILAvDYPVeKvScYvSDDGaalL
                   L++vD+FV T+DP  EPP+   NTvLS++A DYP eK+ +Y+SDD ++ L
  gi|1477730   377 LPAVDIFVCTADPVIEPPIMVVNTVLSVMAYDYPQEKLGVYLSDDAGSEL 426  

                   tFEaLaetaeFArkWVPFCkKhnIEPRaPesYFsqKiDylKdKvrpdFVk
                   tF aL e++ F + W+P+CkK++IEPR P +YFs+    l d  +    k
  gi|1477730   427 TFYALLEASHFSKHWIPYCKKFKIEPRSPAVYFSL-TSHLHDADQA---K 472  

                   eRRamKReYeEFKVRINaLvakaqkrsdafnareelkalkkarvkvPeeg
                   e   +   YeE K RI+    k  +                    +Pee 
  gi|1477730   473 ELEXIQKLYEEMKDRIET-ATKLGR--------------------IPEEV 501  

                   WvMqDG.TpWPGtWaesaenntrDHpGmiQVfLg..psgaedveGnegee
                    + q G + W          ++ DH  ++Q++ ++  ++a dveG++   
  gi|1477730   502 LMEQKGfSQWDS------FSSRHDHDTILQILIDgxDPNAMDVEGSK--- 542  

                   ralDltdvDirLPrLVYVSREKRPGydHhKKAGAmNALVRvSAvLtNgpF
                              LP LVY  REKRP   H+ KAGAmNAL    A+ t    
  gi|1477730   543 -----------LPTLVYLAREKRPKHPHNFKAGAMNAL---TAICTXTIH 578  

                   iLNLDCDHYinNSkAirEamCFlmDpqlGkkvcYVQFPQRFdGIDpsDRY
                   i              +r+a+CF mD + G+++++VQ+PQ F+ I ++  Y
  gi|1477730   579 I-------------PFRDALCFFMDEEKGQEIAFVQYPQNFENITKNELY 615  

                   ANrNtVFFDiNmrgLDGiqGPvYVGTGcvFrRqALYGydPPkkekrkket
                   +    V   +   gLDG  GP+Y+GTGc  rR  L G             
  gi|1477730   616 SSSLRVISEVEFHGLDGYGGPMYIGTGCFHRRDTLCG------------- 652  

                   idcwpkwiicscCfgrrkkkkskkkkkkakeakkdakkkeseaeifnled
                                   rk +k+ +++                        
  gi|1477730   653 ----------------RKFSKDYRNEW----------------------- 663  

                   ideglegytdeeeksslmsqksleKrFGqSsvfvaStlveefqGrpladh
                                           Kr        +S++ ee         
  gi|1477730   664 ------------------------KR--------ESIKTEE--------- 672  

                   ksvkngrPpGaggvprsalpaalvkEAI.hVISCgYEdKTeWGkeiGWIY
                                       a  ++E+ ++  SC YE  T+WG+e G  Y
  gi|1477730   673 -------------------SAHELQESLkNLASCRYEGDTQWGNEMGLKY 703  

                   GSVTEDilTGFkMHcrGWrSiYCvpkrdAFkGsAPINLsDRLhQVLRWAl
                   G   ED++TG    c GW+S+Y  p   AF G AP  L   L Q  RW  
  gi|1477730   704 GCPVEDVITGLSIQCLGWKSVYLNPAXKAFLGVAPTTLEQTLVQHKRWSE 753  

                   GSVEIffSrhcplwygygGgrLKfLeRlAYiNtivYPfTSipLiaYCtLP
                   G   I++S+ +p wyg  G r+     l Y     +P  S+  + YC++P
  gi|1477730   754 GDLQILLSKYSPAWYG-LG-RISPGLILGYCTYCLWPLNSLATLSYCIVP 801  

                   AicLltgkFIvptlsnlasiyllllflsiivtavLElrWSGvsieewWRN
                    + Ll g    p++s    + +  + l+    ++ E  WSG ++  wW  
  gi|1477730   802 SLYLLHGIPLFPQVSSPWFLPFAYVILAKYSGSLAEFLWSGGTLLGWWND 851  

                   EQFWvIGGvSAHLfAVfQGlLKVlaGidtnFTvTSKasdddeddeF.aeL
                      W+   + + LfA +  +L++l   +t+F +T+K +d+d  + +++e+
  gi|1477730   852 QRIWLFKRTTSYLFAFMDTILRLLGFSETSFILTAKVADEDVSQRYeGEM 901  

                   YifKWTtLlIPPt.tllivNlvgivaGvsrainsgypsWgpLfGklFFaf
                     f  ++ +   + tl ++Nl  +v Gv + +   ++    +  ++  a+
  gi|1477730   902 MEFGGSSPMFTILaTLAMLNLFCVV-GVVKKVGLDMEVYKTMALQILLAV 950  

                   WVivHLYPFlKGLmGRq..nrtPTIVvvWSvLLAsifSLLWvrInPfvsk
                     ++  +P   GL  R++++++P                   +  P   +
  gi|1477730   951 VLLLINWPLYQGLFLRKdnGKMP------------------CKARP--RE 980  

                   tdgpslele<-*
                    ++++++++   
  gi|1477730   981 SNKTDISSS    989  

EMP24_GP25L: domain 1 of 1, from 1018 to 1173: score 56.7, E = 9e-14
                   *->altfelppgekeCFyEelkkkgtkvtgsYqVi...............
                      +++f ++  e  CF  +++++g++++ s+ Vi+ + + + ++++ + 
  gi|1477730  1018    GIRFVIDREE--CFSHNVEYEGDTIHASFVVIkvdaswhynkdgvdl 1062 

                   ........didvtvkdPfdngkrvlykkerkseGdftFtalesGeYkfCF
                       + + +++ +vk+P+  g+ + +++++ ++ +f+F a+e+G + fCF
  gi|1477730  1063 vwyfqydyTLSNKVKGPS--GNQIQDYRDK-TSEKFEFMAHEKGLHXFCF 1109 

                   sNefsktfssktVsfdid.....kekldpalessirkLeeqlnsikreQk
                   +N+++   ++ t++fd+ +++    +++                      
  gi|1477730  1110 TNKSP---YHETIDFDVYtghfaYYDQHA--------------------- 1135 

                   ylrekREarhrntsEsTNsRVvwWSiiqllvlvgvsvfQvyyLKrFFe<-
                       k      ++++ + +R v+ ++ ++++l+g+s++Qvy L+r+Fe  
  gi|1477730  1136 ----K------DVNDAMSRRAVYKAFYESAALIGASILQVYLLRRLFE   1173 

                   *
                    
  gi|1477730     -   -    
