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Domain name : PF04387.6_PTPLA
Domain size : 168
Domain Description : Protein tyrosine phosphatase-like protein, PTPLA
Domain gathering score : 25.0000
Domain trusted cutoff : 25.6000
Domain architecture : non-TM/SP [1 97], TM [98 177]
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Example 1
gi|125524441|gb|EAY72555.1| hypothetical protein OsI_000402 [Oryza sativa (indica cultivar-group)] 646 (length) 523 646 .] (wrt seq) 1 168 [] (wrt HMM) 
No.of residues in non-TM/SP region : 60 [62%(over non-TM/SP length)]

Scores for sequence family classification:
Model        Description                                Score    E-value  N
--------     -----------                                -----    ------- ---
PTPLA        Protein tyrosine phosphatase-like protei   -19.5    1.9e-05   1
adh_short    short chain dehydrogenase                   -2.7    2.1e-05   1
Epimerase    NAD dependent epimerase/dehydratase fami   -67.3      0.041   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
PTPLA          1/1     523   646 .]     1   168 []   -19.5  1.9e-05
adh_short      1/1      49   205 ..     1   181 []    -2.7  2.1e-05
Epimerase      1/1      51   319 ..     1   286 []   -67.3    0.041

Alignments of top-scoring domains:
PTPLA: domain 1 of 1, from 523 to 646: score -19.5, E = 1.9e-05
                   *->QtlAvlEilHsifGlVkSpvvttffQVsSRlfivwgiihsvpevqak
                                s++         ++ Q   Rl        ++++ +  
  gi|1255244   523    ----------SFL---------PLGQ---RL------EAACSDDK-- 539  

                   psvvvfslllaWsitEIiRYsfYafn.llgqtaPyfLtWLRYtlFivLYP
                    +++ +s++       + RYsf + ++ +g ++P++L WLRY++Fiv  P
  gi|1255244   540 SHWSRPSMV-------VTRYSFHGMKeSFG-FTPSWLFWLRYSTFIVCFP 581  

                   lGvtsElltvyaslpyveesgrfSvelP..........nklNisFdYvlf
                   +G ++E++++y +lp+         e++ ++ + +++++k+++sF Y+++
  gi|1255244   582 VGMVCEVVLIYIALPFM--------EMKaqqyqaseksDKWSFSFNYFYA 623  

                   LiiaLmliYIPGfyqlYsHMiaQRrKvLkkgs<-*
                      + m++        +    aQ   v+ + +   
  gi|1255244   624 NLFF-MAS--------FATATAQVATVSSANK    646  

adh_short: domain 1 of 1, from 49 to 205: score -2.7, E = 2.1e-05
                CS    EEEEECTTSSHHHHHHHHHHHHT.TCEEEEEESSH..HHHHHHHH..
                   *->GTvLiTGGtGGLGlavARwLvaeHGArhLvLvsRrGpdapgaaeLrr
                        ++  GG++G+Gl++ R ++ + GA h++ ++R+   +++a  +  
  gi|1255244    49    EFIIQSGGASGIGLETSRVFAMR-GA-HVIIAARN---TEAASVV-- 88   

                CS ..HHHHHHTT  EEEEEEE.TTTHHHHHHHHHHHHH.HHTSCCCEEEE--
                   iavaeLealG..AeVtvaacDVaDrdalaallaaipkaaegPLtgVVHaA
                     +  + +  ++A+++v   D+++  +++a  ++       PL +++++A
  gi|1255244    89 --RKKIIEENpkAHIDVLKLDLSSLKSVRAFADQFN-SMNLPLNILINNA 135  

                CS --T-BSCGGGHHHHHHHHHHHHHTHHHHHHHHHHHHCHHHHCH  TTEEE
                   GvldDgvlesltperldrVlapKvdgAwhLheltrdlmikldr..geLda
                   Gv    +++   ++ ++  +a++  g ++L+ l++d+m++  +++g+ ++
  gi|1255244   136 GVMF-CPFGLS-EDGVEMQFATNHLGHFLLTNLLLDNMKATAKstGIESR 183  

                CS EEEEEHGGGTS-TTTCHHHHHHHHHHHHHHHHHHHHHG   
                   FVlfSSaAGvlGspGQanYAAANAfLDaLAehRraeGL<-*
                   +V+ SS+A                +L    +    + L   
  gi|1255244   184 IVNLSSVA----------------HLHTYPKGIEFDKL    205  

Epimerase: domain 1 of 1, from 51 to 319: score -67.3, E = 0.041
                CS    EEEETTTSHHHHHHHHHHHHCTTEEEEEEEECTT-TGGGTCCCCTCC
                   *->iLVTGgtGfiGsaLvrrLleeGyevivlDvlgrrrrseslntvridh
                      i+  Gg+  iG  + r+++ +G +     v++ +r+ e++ +vr + 
  gi|1255244    51    IIQSGGASGIGLETSRVFAMRGAH-----VIIAARNTEAASVVRKKI 92   

                CS G--.--  - - -..STEEEEE--TT-HHHHHHHHHHH     T-SEEEE
                   lyqidp..H.e.sktprvefvegDltdpdalerllaev.....qPDaVih
                   +++ +p+ H +  k        +Dl+   +++++ ++ ++ +      i+
  gi|1255244    93 IEE-NPkaHiDvLK--------LDLSSLKSVRAFADQFnsmnlPLNILIN 133  

                CS --S---.HHHHH HSHHHHHHHH     THHHHHHHHHHHHHTH...T  
                   lAAqsgGvdasf.edpaefiraN.....vlgtlnLLeaarkagvegae..
                    A+  + ++  ++ed +e+  a ++ +++l+t  LL+ +++     + + 
  gi|1255244   134 NAGVMF-CPFGLsEDGVEMQFATnhlghFLLTNLLLDNMKATAK--STgi 180  

                CS T-EEEEEEE.GGG  GTSBSSSSCB-TTS--..--SSH....HHHHHHHH
                   rkrfvfaSSasev..YGkvqagppitEttpltegPlsPtNegYaaaKlag
                     r v++SS++++++Y+k+ + + + ++  +   +  +    Y+ +Kla 
  gi|1255244   181 ESRIVNLSSVAHLhtYPKGIEFDKLNDEKTY--DDKMA----YGQSKLAN 224  

                CS HHHHHHHHHH..HT-EEEEEEESEEESTT.S-TTSTTSHHHHHHHHHHTT
                   erlvlayaraGvygldavilRlfNvyGPgdrgdpfvthvipalirrileg
                   +  ++   r     l++++  l    G         ++ ++ +++ + e 
  gi|1255244   225 ILHAKELSRR----LKGTVAVLVAGWGLV--AGLSGGGQWSLVVMAAAEP 268  

                CS SSS. .... ..       ... .EEEET.SSSTST-EEEEEEHHHHHHH
                   kpdg.adal.ev.......qae.eilllGDYTpdGtarRDflyVdDvarA
                   k +  a a+++++   +++ + ++++ lG               + +   
  gi|1255244   269 KLRWaANAArQLgvwlppgKIRsPPPDLG---------------REHRAS 303  

                CS HHHHHHHCTTTTEEEEES   
                   illalehpeaggevyNiG<-*
                   +  ++ +    g+ + +G   
  gi|1255244   304 VDILVPRRF--GRRVHCG    319  

Revised version of example 1 
gi|218187534|gb|EEC69961.1|hypothetical protein OsI_00420 [Oryza sativa Indica Group] 198 (length)

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PTPLA    Protein tyrosine phosphatase-like protein, P    26.2    6.1e-09   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PTPLA      1/1      63   194 ..     1   168 []    26.2  6.1e-09

Alignments of top-scoring domains:
PTPLA: domain 1 of 1, from 63 to 194: score 26.2, E = 6.1e-09
                   *->QtlAvlEilHsifGlVkSpvvttffQVsSRlfivwgiihsvpevqak
                                s++         ++ Q   Rl        ++++ +  
  gi|2181875    63    ----------SFL---------PLGQ---RL------EAACSDDK-- 79   

                   psvvvfslllaWsitEIiRYsfYafn.llgqtaPyfLtWLRYtlFivLYP
                    +++ +s++       + RYsf + ++ +g ++P++L WLRY++Fiv  P
  gi|2181875    80 SHWSRPSMV-------VTRYSFHGMKeSFG-FTPSWLFWLRYSTFIVCFP 121  

                   lGvtsElltvyaslpyveesgrfSvelP..........nklNisFdYvlf
                   +G ++E++++y +lp+         e++ ++ + +++++k+++sF Y+++
  gi|2181875   122 VGMVCEVVLIYIALPFM--------EMKaqqyqaseksDKWSFSFNYFYA 163  

                   LiiaLmliYIPGfyqlYsHMiaQRrKvLkkgs<-*
                      + m++  +  ++l++++ia R+K L+k++   
  gi|2181875   164 NLFF-MASFATVYPVLFRYLIALRKKALAKAK    194  
