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Domain name : PF07127.3_Nodulin_late
Domain size : 67
Domain Description : Late nodulin protein
Domain gathering score : 25.0000
Domain trusted cutoff : 25.0000
Domain architecture : TM/SP [1 28], non-TM/SP [29 69]
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Example 1
gi|87241553|gb|ABD33411.1| Terpenoid cylases/protein prenyltransferase alpha-alpha toroid; Terpenoid synthase; Late nodulin [Medicago truncatula] 175 (length) 1 41 [. (wrt seq) 1 67 [] (wrt HMM) 
No.of residues in non-TM/SP region : 14 [34%(over non-TM/SP length)]

Scores for sequence family classification:
Model        Description                                Score    E-value  N
--------     -----------                                -----    ------- ---
Terpene_synth_C Terpene synthase family, metal bindin     6.1      2e-07   1
Nodulin_late    Late nodulin protein                     35.4    2.3e-07   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
Terpene_synth_C   1/1      61   175 .]     1   288 []     6.1    2e-07
Nodulin_late      1/1       1    41 [.     1    67 []    35.4  2.3e-07

Alignments of top-scoring domains:
Terpene_synth_C: domain 1 of 1, from 61 to 175: score 6.1, E = 2e-07
                CS    HHSCH.CCHHHHHHHHHHHHHHHHHHHHHHHSCHSHHHH.CHHHHHH
                   *->lLeLArKLdFNflQalhqqELkeltrWwkeldlaskLpfyaRdRlvE
                      lL LA  LdFN+lQ+lhq+E   ++ Wwkeld  skLp+  Rd    
  gi|8724155    61    LLILA-QLDFNMLQSLHQEEFGNFSNWWKELDVRSKLPY-TRD---- 101  

                CS HHHHHHHHHHTTTSTHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHH
                   cYFwalavyfEPqaySdaRialaKtaalltiiDDtyDaygtleErlLelf
                        + vy+ Pq yS aR+ ++K+++++t+i Dty+a+g ++E  Lelf
  gi|8724155   102 -----MIVYYKPQ-YSMARKVMTKLFVIITVINDTYHAFGRIDE--LELF 143  

                CS HHHHHHT....-CHHCGTS STCSCHHHHHHHHHHHHHHHCCHHHHHHHH
                   tdaveRWlslrDilnsaid.LPdymkivfkalldtfeeieeelskeqGrs
                   t a+eRW    Di  s+ d+LPdymk +                   + +
  gi|8724155   144 TKAIERW----DI--SCSDnLPDYMKYL-------------------CDN 168  

                CS ....--HHHHHHHHHHHHHHHHHCTCCSCHC---SHHHHHHHHHHCCHHH
                   lshGyivpylkeawkdlvkayleEAkWakeghvPsfeEYlengrvsigap
                                                                     
  gi|8724155     - -------------------------------------------------- -    

                CS HHHHHHHTTS..HHHCTHHHHHHCHHHCHHHHHHHHHHHHHHHHHHHHHH
                   lllllsflgmgGgdiateeafewlksrpkalvqlsslilRLlNDiasyek
                                          l+     +++                 
  gi|8724155   169 -----------------------LRA----MMKH---------------- 175  

                CS HHTCS-SSCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH   
                   EmarGevassiecYMkeypgvteEeAlehvqkmiedawkeln<-*
                                                                
  gi|8724155     - ------------------------------------------    -    

Nodulin_late: domain 1 of 1, from 1 to 41: score 35.4, E = 2.3e-07
                   *->MAkiLKCVFVYaiILFlSLFLvamnvdarekLlpYieCetDeDCPtk
                      MAk+LK  FVY+i+LFlSLFLva+n+d++            + C + 
  gi|8724155     1    MAKTLK--FVYVIVLFLSLFLVAKNIDGA------------KHCLRQ 33   

                   ihpelekfsliyKCInkfCk<-*
                    ++            +++ +   
  gi|8724155    34 TLH------------KNIPR    41   
