SUPPLEMENTARY DATA ITS alignment for Alysseae #NEXUS [File written by program FastGap v1.0.8 -- Time: Tue May 18 10:48:15 2010] BEGIN DATA; DIMENSIONS NTAX=30 NCHAR=794; FORMAT MISSING=? DATATYPE=DNA GAP=- INTERLEAVE; OPTIONS GAPMODE=MISSING; MATRIX [Datafile: C:\Documents and Settings\Federico Selvi\Desktop\Alysseae 2010.05.18 ritoccato.txt] Aut CAAAACAGAACCACCCGCGAACGAACGATCATCAATTC-CGGCAGTGCGGTCTCCTA-GCCGATTACGT-GCCCGCT-GGATCCGTGGCT-CCACGCACTGCTCCCGA-ACGA-TCT-TCGG-------TCG-GACTATGCGCGTTGCTTCCGGAAATCACAAAACCCC-GGCACGAAAAGTGTCAAGGAACATGCAA--CATGAACAGCTCCGCATCCGCGG--CCCCGGAGACGGTGCGTCC-GCGGATGCTCTGCT--GC-GAAATCTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCACCC-AA-ATCC-T-CTAA---GGA---CGGA-GGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCGAAATCCGAGCTA-AGGACGCCCGGAGCGTC-TCGAC-ATGCGGTGGTGAAAACAA-AGC--TCTCGGTATCGTCGG-TCGCTCCA---GTCCGGAAGCTCTAGA---TGACCCAATGTCCTCAACGCGACCCCAGGTCAG Cve CAAAACAGAACCACCCGCGAACGAATGATCATCACTTC-CGGCAGGCCGGTCTCTTA-GCCGATTCCGT-GCCCGCT-GGATCCGTGGCT-CCGCGCACTGCTCCCGA-ACG--TCT-TCGA-------TCG-GACTATGCGCGTTGCTTCCGGAAATCACAAAACCCC-GGCACGAAAAGTGTCAAGGAACATGCAA--CATGAACAGCTCTGCATYYGCGG--CCCCGGAGACGGTGCGTTC-GCGGATGCTCTGCT--GT-GAAATATAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCGGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCCCC-AA-ATCC-T-CTAA---GGA---CGGA-GGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCGAAATCCGAGCTA-AGGACGCCYGGAGCGTC-TCGAC-ATGCGGTGGTGGAATCAA-AGC-CTCTCGGTATCGTCGA-CCGCTCCT---GTCCGGAAGCTCTAGA---TGACCCAAAGTCCTCAACGCGACCCCAGGTCAG Pcs CAAAACAGAACCACCCGTGAACGAATGATCATCACTTC-CGGCAGGCTGGTCTCTTA-GCCGATTCCGT-GCCCGCT-GGATCCGTGGCT-CCGCGCACTGCTCCCGA-ACG--TCT-TCGA-------TCG-GACTATGCGCGTTGCTTCCGGAAATCACAAAACCCC-GGCACGAAAAGTGTCAAGGAACATGCAA--CATGAACAGCTCCGCATCCGCGG--CCCCGGAGACGGTGCGTTC-GCGGATGCTCTGCT--GC-GAAATCTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCTAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCCCC-AA-ATCC-T-CTTA---GGA---CGGA-GGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCGAAATCCGAGCTA-AGGACGACCGGAGCGTC-CCGAC-ATGCGGTGGTG-AATAAA-AAC-CTCTCGGTATCGTCGG-CCGCTCCT---GTCCGGAAGCTCTAGA---TGACCCAAAGTCCTCAACGCGACCCCAGGTCAG Fcl CGAAACAGAACCACCCGCGAACCAACGATCATCACTTCTCGGCAGGCCGGTCTCTTA-GCCGATTCCGT-GCCCGCT-GGATCCGTGGCT-CCGCGCACTGCTCCCGA-ACGTCTCTGACGA-------TCG-GACTATGCGCGTTGCTTCCGGAAATCACAAAACCCC-GGCACGAAAAGTGTCAAGGAACATGCAA--CATGAACAGCTGCGCATCCGCGG--CCCCGGAGACGGTGCGTCG-GCGGATGCTATGCT--GC-GAAATCTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATTGAGTCTTTGAACGCAAGTTGCCCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCCCCCAA-ATCC-T-CTAA---GGA---AGGA-GGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCGAAATCCGAGCTAGAGGACGTCCGGAGCGTC-TCGAC-ATGCGGTGGTGAAAACAA-AGC-CTCTCGGTATCGTCGG-ACGCTCCT---GTCCCGAAGCTCTAGA---TGACCCAAAGTC????????????????????? Dve CAAAACAGAACCACCCGCGAACGAACGATCATCACCTCTCGGTGGGCCGGTCTCTCA-TCCGATTCCGT-GCCCGCC-GGATCCGTGGTTTCCGCGCACTGCTCCCGG-ACG--TCT-TCGA-------TCG-GACTGCGCGCGTTGCTTCCGGAAATCACAAAACCCC-GGCACGAAAAGTGTCAAGGAACATGCAAAACATGAACGGCTNCGCATCCGCGG--CCCCGGAGACGGTGCGTCC-GCGGATGCTCTGCT--GC-GAAATCTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAACCGTCGTCCCCCCCAAA-ATCC-T-CTGA---GGA---CGGAAGGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCGAAATCCGAGCTG-AGGACGCCCGGAGCGTC-TCGAC-GTGCGGTGGTGAAAACAA-AGC-CTCTCGGTATCGTCGG-CCGCTCCT---GTCCCGAAGCTCTAGA---CGACCC??????????????????????????? Ame CGAAACAGAACGACCCGTGAACGAACGATCATCACCTC-TGGCGGGCCGATCTCTTT-GTGGATTTCGT-GCCCGCT-GGATCCGTGGTT-TCGCGAACTGTCCTGATTGC--GAGTCTCATCTCCGATCCG-GGCTTTGCGCGTTGCTTCCGGACTTAACAAAACCAC-GGCACGAAAAGTGTCAAGGAACATGCAA---TCGAACGGCTAGGCTTCCGCGG--CCCCGGAGACGGTGCGTCC-GTGGATGCTTAGGC--GTGAAAATCTAAA-GTCTAAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCTCC----ATCC-T-TTCGA--GGA---AAG-TGGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCGAAATCCGAGCCA-AGGGCGCCGGGAGCGTC-CCGAT-ATGCGGTGGTGAAAAC-A-AGC-CTCTTCGTAACGTCGGTCCGCTCCC---GTCCGGAAGCTCCAGA---TGACCCAAAGTCCTCAACGCGACCCCAGGTCAG Aob2 CAAAACAGAACGACCCGAGAACGAACGATCATCACCTC-TGGCGGGCCGGTCTCTTA-GCTGATTCCGT-GCCCGCT-GGATCCGTGGTT-TCGCGAATTGCTCCGATCAC--GACTCGCGTCTTCGATCTG-GGCTCTGCGCGTTGCTTCCGGACTTAACAAAACCCC-GGCACGAAAAGTGTCAAGGAACATGCAA--CTA-AACAGCTACCCATCCGCGG-TCCCCGGAGACGGTGTGTCC-GCGGATGCTTAGCC--GT-TAAATCTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGCGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCTCC----ATCC-T-CTCGA--GGA---TTG-CGGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCAAAATCCGAGCCA-AGGACGCCGGGAGCGTC-TCGAC-ATGCGGTGGTGAAAACAA-AGC-CTCTTCATATCGTCGGTCCGCTCCT---GTCCGGAAGCTCTAGA---TGACCCAGAGTCCTCAACGCGACCCCAGGTCAG Cjo CAAAACAGAACGACCCGAGAACGAACGAACATCACCTC-TGGCTGGCCGGTCTCTTA-GTTGATACCGT-GCCAGTT-GGATCCGTGGTT-TCGCGAACTGCTCCGATTATATGACTAACGTCTTTGATTTG-GACTTTGCGCGTTGCTTCCGGACTTAACAAAACCAC-GGCACGAAAAGTGTCAAGGAACATGCAA--CTACAACAGCTACTCATCCGCGGCTCCCCGGAGACGGTGTTTCT-GCGGATGCTTAGCT--GT-AAAATCTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCTCC----ATCC-T-CTCGA--GGA---CTG-CGGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCAAAATCCGAGCCA-AGGACGTCGGGAGCGTC-TCGAC-ATGCGGTGGTGAAAA-GA-AGC-CTCTTCATATCGTCGGTATGCTCTT---GTCCGGAAGCTCTAGA---TGACCCTGAGTCCTCAATGCGACCCCAGGTCAG Amo1 CAAAACAGAACGACCCGCGAACGAACGATCATCACTCC-CGGCGGGCCGGTATCCTA-ACAGATTCCGTTGCCCGCT-GGTTCCGTGGTT-TCGCGAACTGTCCCAGATTCG-GACTCACGTC-CGGATCCG-GCCTTTGCGCGTTGCTTCCGGACTTAACCAAACCAC-GGCACGAAAAGTGTCAAGGAACATGCAA--CTA-AACGGCTCGGCATTAGCGA--CCCCGGAGACGGGGTGTCCCGTGGATGCTCTGCT--GT-GAAATCTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCTAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCCCACATGATCC-TTCTCGGATGGA---TGGGTGAGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCGAAATCCGAGCAA-AGGACGCGAGGAGCGTC-TCGAC-GTGCGGTGGTGAAGA---------TCGTCATATCGTCG-TATGCTCCT-CTGTCCGGAAGCTCTTTG---AGACCC-GAGTCCTCAACGCGACCCCAGGTCAG Bor CAAAACAGAATGACCCGAGAACGAACGATCATCACCTC-TGGCGGGCCGGTCTCTTA-ACCGTTTCCGT-GCCCGCC-GGATCCGTGGTT-TCGCAAGTAGT--CTGGTC-------------TCCGGACCC-TTCTGCGTGCGTTGCTTCCGGAAATCACAAAACCCC-GGCACGAAAAGTGTCAAGGAACATGCAA---CTAAACGGCTCCGCATCCGCGG--CCCCGGAGACGGTGCGTC--GCGTATGCTTGGCT--GGTAAAAAATAAA-GTCTAAA--CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCCCCCTCCATCCTTGCTTGCGAGGATG-CGGACGGGACGGAAGCTGGTCTCCCGTGTGTTAC-GCACGCGGTTGGCCAAAATCCGAGCTA-AGGACGCGTGGAGCGTC-CCGAC-CTGCGGTGGTGAAAAC-T-TGC-CTCTTTGTACGGTCGG-ACGCTCCT--GT-CCGGAAACTCCAGA---TGACCCGAAGTCCTCAACGCGACCCCAGGTCAG Gma CAAAACAGAACGACCCGAGAACAAACGATCATCACTTC-TGGCGGGCCGGTCTCTTA-ATTGATTCCGT-GTCTGCT-GGATCCGTGGTT-TCGTGAGTAGA--CTTGTCCAAGATTCGCGTCTCTGGACTT-GCCTGCGCGCGTTGCTTCCGGAAATCACAAAACCCC-GGCACGGAATGTGTCAAGGAACATGCAA---CTAAACGGCCCTGCATCCGTGG--CCCCGGAGACGGTGTGCC--GTGGGTGCTTGGCT--GG-AAAAATTAAA-GTCTAAA--CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCCCCCTCCATCCCTCC----GAGGATG-TGAACGGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCAAAATCCGAGCTA-AGGACGCGTGGAGCGTC-TCGAC-TTGCGGTGGTGAAAAC-T-TGC-CTCGTTATACTGTCGG-ACGCTCCT--GTTCCCGAAACTCTAGA---TGACCCAAAGTCCTCAACGCGACCCCAGGTCAG Bba1 CAAAACAGAACGACCCGCGAACAAACGATCATCACTTC-TGGCGAGCCGGTTTCTTA-GCTGATCCCGT-GTCCGCT-GGATCCGTGGCT-CTGCGCTCTGCTCATGA-ACGAGATTCACGTCTCCGA-TC--AGCTTTGCGCTTTGCTTCCGGAATTCACAAAACCCCCGGCACGAAAAGTGTCAAGGAACATGCAA--CAAAAATAGCTCTGCATCCGCGG--CCCCGGAGACGGTGTGTTT-GCGAATGCTTAGCT--GC-GAAACTTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCCCT----ATCCTT--------TGA-GGATGATCGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCTAAATCTGAGCCA-AGGACGCCGGGAGCGTC-TCGAC-ATGCGGTGGTGAAAAC-A-AGC-CTCCTACTATTGTTGG-TCGCTCCA---GTCCGGAAGCTCTAGA---TGACCCAAAG??????????????????????? Bba2 CAAAACAGAACGACCYGCGAACAAACGATCATCACTTC-TGGCGAGCCGGTTTCTTA-GCTGATCCCGT-GTCCGCT-GGATCCGTGGCT-CTGCGCTCTGCTCATGA-AYGAGATTCACGTCTCCGA-TCT-AGCTCTGCGCTTTGCTTCCGGAATTCACAAAACCCCCGGCACGAAAAGTGTCAAGGAACATGCAA--CAAAAATAGCTCTGCATCCGCGG--CCCCGGAGACGGTGTGTTT-GCGAATGCTTAGCT--GC-GAAACTTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTGGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCCCT----ATCCTT--------TGA-GGATGATCGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCTAAATCTGAGCCA-AGGACGCCGGGAGCGTC-TCGAC-ATGCGGTGGTGAAAAC-A-AGC-CTCCTACTATTGTTGG-TCGCTCCA---GTCCGGAAGCTCTAGA---TGACCCAAAGTCCTCAATGCGACCCCAGGTCAG Bty1 CAAAACAGAACGACCCGCGAACAAACGATCATCACTTC-TGGCGAGCCGGTTTCTTA-GCTGATCCCGT-GTCCGCT-GGATCCGTGGCC-CTGCGCTCTGCTCATGA-ACGAGATTCACGTCTCCGA-TCT-AGCTCTGCGCTTTGCTTCCGGAATTCACAGAACCCCCGGCACGAAAAGTGTCAAGGAACATGCAA--CCAAAATAGCTCTGCATCCGCGG--CCCCGGAGACGGTGTGTTT-GCGAATGCTTAGCT--GC-GAAAGTTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCTCCAAGCCTTCTGGCCGAGGGTACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCC-T----ATCCTT--------TGA-GGATGATCGGACGGAAGCTGGTCTCCCGTGTGTAACCGCACGCGGTTGGCCTAAATCTGAGCCA-AGGACGCCGGGAGCGTC-TCGAC-ATACGGTGGTGAAAAC-A-AGC-CTCCTACTATTGTTGG-TCGCTCCA---GTCCGGAAGCTCTAGA---TGACCCAAAGTCCTCAATGCGACCCCAGGTCAG Lem2 CAAAACAGAATGACCCGCGAACAAACGAACATCACTTC-TGGCGAGCCGGTTTCTTA-GCTGATCCCGT-GTCCGCT-GGATCCGTGGCT-CTGCGCTTTGCTTATGA-ACGAGATTCACGTCTTCGA-TCT-AGCTTTGCGCTTTGCTTCCGGAATTCACAAAACCCC-GGCACGAAAAGTGTCAAGGAACATGCAA--CAAAAATAGCTCTGCATCTGCGG--CCCCGGAGACGGTGTGTTT-GTGAATGCTTAGCT--GC-GAAACTTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCCAT----ATCCTT--------TGA-GGATGATCGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCTAAATCTGAGCCA-AGGATGCCGGTAGCGTC-TTGAC-ATGCGGTGGTGAAAAC-A-AGC-CTCCTACTATTGTTTG-TCGCTCCA---GTCCGGAA???????????????????????????????????????????? Lem1 ????????????????????????????????????????????????????????????????????????????????????????????????????????ATGA-ACGAGATTCACTTCTTCGATCA--AGTTTTGCGCTTTGCTTCCGGAATTCCCAAAACCCC-GCCACGAAAAGTGTCAAGGACCATGCAA---CAAAAATAGTTTGCCTTCGGGG-GCCCCGGGGCCGGGGGGTTT-GGAAATGTTTAGTT--GG-GAAACTTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCCAT----ATCCTTTGA---------GGATGATCGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCTAAATCTGAGCCA-AGGATGCCGGGAGCGTC-TTGAC-ATGCGGTGGTGAAAACA--AGC-CTCCTACTATTGTTTG-TCGCTCCA---GTCCGGAAGCTACATGAGATGACCCGATAG?????????????????????? Pcy CAAAACAGAACGACCCGCGAACGAATGATCATCACTTC-CGGTGGGCCGGTTTCTTA-GCTGATCCCGT-GCCCGCT-GGATCCGTGGCT-TCGCGCATTGCTCC-GA-ACGAGATTCACATCTTTGA-ATG-GGTTTTGCGCGTTGCTTCCGGAAATCACAAAACCCC-GGCACGAAAAGTGTCAAGGAACATGCAA--CAAAAACAGCTTTGCATCCGCGG--CTCCGGAGACGGTGTGTTC-GCGAATGCTTAGCT--GT-GAAATCTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCCCA----ATCCTT--------CGA-GGATGAAGGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCAAAATCCGAGCTA-AGGACGCCCGGAGCGTC-TCGAC-ATGCGGTGGTGAAAAC-A-AGC-CTCGTTGTATCGTCGG-TCGCTCCT---GTCTGGAA???????????????????????????????????????????? Pru CAAAACAAAACGACCCGCGAACGAACGATCATCACTTC-CGGTGGGCCGGTTTCTTA-GCTGATCCCGT-GCCCGCT-GTATCCGTGGCT-CCGCGCATTGCTCCTGA-ACGAGATTCACGTCTTCGA-TTG-GGTTTTGCGCGTTGCTTCCGGAAATCACAAAACCCC-GGCACGAAAAGTGTCAAGGAACATGCAA--CAAAAACAGCTCTGCATCCGCGG--CTCCGGAGACGGTGTGTTC-GCGAATGCTTAGCT--GC-GTAATCTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCCCC----ATCCTT--------CGA-GGATGAAGGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCAAAATCCGAGCTA-AGGACGCCGGGAGCGTC-TCGAC-ATGCGGTGGTGAAAAC-A-AGC-CTCGTTGTATCGTCGG-CCGCTCCT---GTCTGGAA???????????????????????????????????????????? Hlo CAAAACAGAACCACCCGCGAACAAACGATCACCACTTC-CGGCTGCGCGGTCTCTTA-GCCGATTCCGC-GTCGGCC-GGATCCGTGGCT-CCGCGCGCTGCCCCCA--ACGAGACTCGCTTCTCCGAAGAGTGTCTGCGYGCGTTGCTTCCGGACTTCACCAAACCAC-GGCACGAAAAGTGTCAAGGAACATGCAA--CGACAAAGGCCTCGCACACGCGA--CCCCGGAGACGGTGCGTCG-ACGGATGCTTGGCTAAGTTAAAAAAAAAA-GTCTAAAA-CGACTTTCGGCAACGGATATCTCGG-TCTCGCATCGATGAAGAACCTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTCCGGGCCGAGGGCACGTCTGCCTGGGTGTCACAGATCGTCGTCCCCCCCA---ATCCTTC-------GAG-GAATGACGGGACGGAAGCTGGTCTCCCGTGTGTTAC-GCACGCGGTTGGCCGAAATCCGAGCTA-AGGACGCCGGGAGCGTC-NAGAC-ACGCGGTGGTGAAAAC-A-AGC-CT------NNCGTCTGTTGGCTCCC---GTCCGGATGCTCCAGAAGATGACCCTAAGTCCTCAACGCGACCCCAGGTCAG Akl2 CAAAACAGAACGACCCGCGAACCAACGATCACTAC-TCGCGGTGGGCTGGTTTCCTA-GCCGATCCCTT-GCCCGCC-GGATCCGTGGTT-TCGCGTACTGTCCCGG--TCGGGAGCTCTATCTCGGTCT---GGTCGTGCGCGTTGCTTCCGGATATCACAAAACCCC-GGCACGATAAGTGTCAAGGAACATGCAA---CCAAACAGC-CGGCATTCGTCT--CCCCGGAGACGGTGTGTGC-GCGGATGCTGAGCT-----GCGATCTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAATCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTTTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCATC----ATCCTT--------TG-CGGAT--TCGGACGGAAGCTGGTCTCCCGTGTGTTACCGCATGCGGTTGGCCTAAATCTGAGC-AAAGGACGCCGGGAGCGTT-CCGACCATGCGGTGGTGAATTCTCGATC-CATTTCATAACGTCGG--CGCTCCT---GTC-GGAAGCTCTAA----TGACCCAAAGTCCTCATAGCGACCCC-GGTCAG Aau ??????????????????????????????????????????????????????TTA-GTTGATTCCGT-GCCTGCT-GGATCCGTGGTT-TCGCGAACTGTWCCGA--TCATGACTCACGTCTTTGATCCG-GTCTTTGCGCGTTGCTTCCGGACTTAACAAAACCCC-GGCACGAAAAGTGTCAAGGAACATGCAA---CGAAACAGCTACTCGTCCGCGG-TCCCCGGAGACGGTGTGTCC-GCGGATGATTAGCC--GT-AAAATATAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCCCC-----TCCATCCTCTCGAGGATAGATAGAGAGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCAAAATCCGAGCCAAGGAGCCCGGGAGCGTCT--CGAC-ATGCGGTGGTGAAAACAT-AGC-CTCTTCATATCGTCGGGTCGCTCTT---GTCCGGAAGCTCTAGA---TGACCCCGAGTCCTCAACGCGACCCCACCGCAG Asa1 ?????????????????AGAACGAACTATCATCACCTC-TGGCGGGCCGGTCTCTTA-GCCGATTCCGC-GCCTGCT-GGATCCGTGGTT-TCGCGAGCAGCC----------------CGTCTCCGKACTT-GTCTGCGCGCGTTGCTTCCGGAAATCACAAAACCCC-GGCACGAAAAGTGTCAAGGWACATGCAA---CTAAACGGCCCTGCATCCGCGG--CCCCGGAGACGGTGTGCAT--CGGATGCTCGKCC--GT-AATATCTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCG-TTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGTCCGAGGGCACGTCTGCCTGGKTGTCACAAATCGTCGTCCCCCCC-----TCCATCCTTAGTCGGATGCGAAC-GGGACGGAAGCTGTTCTCCCGTGTGTTACCGCACGCGGTTGGCCAAAATCCGAGC-AAAGGACGTTCGGAGCGTC-CCGAC--TGCGGTGGTGAAAACAAAGCCTCTCGTTATACGGTCGG-CCGCGCST---GTCTCTGAGCTCCAGA---TGACCCTTAGTCC???????????????????? Asa2 ?????????????????AGAACGAACTATCATCACCTC-TGGCGGGCCGGTCTCTTA-GCCGATTCCGC-GCCTGCT-GGATCCGTGGTT-TCGCGAGCAGCC----------------CGTTCCCGGACCT-GTCTGCGCGCGTTGCTTCCGGAGATCACAAAACCCC-GGCACGAAAAGTGTCAAGGAACATGCAA---CTAAACGGCCCTGCATCCGCGG--CCCCGGAGACGGTGTGCAT--CGGATGCTCGGCC--GG-AATATCTAAAAGTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCCCC-----TCCATCCTTAGCCGGATGCGAAC-GGGACGGAAGCTGGTCTCCCGTGTGTTACCGCACGCGGTTGGCCAAAATCCGAGC-AAAGGACGTTCGGAGCGTC-CCGAC-CTGCGGTGGTGAAAACAAAGCCTCTCGTTACACGGTCGG-ACGCTCCT---GTCC???????????????????????????????????????????????? Fae CAAAACAGAACCACCTGAGAACAAAG-ATCATCACTCTAGGCGGG-CCGGTTTCTTA-GCTGATCCCG-TGTCCGCCGTCATCCGTGGTT-ATGCGCATGGTCCCAGCCAATGGCCTGGCCTTGGTGGAAT----CATG-CACATAGCTTCCGGATATCACAAAACCAC-GGCACGAAAAGTGTCAAGGAACATGTAA---CCGAACAGCTA-GCTTCCGCCA--CCCCGGAGACGGTGCGTGC-GTGGGAGCTATGCT-----GCGATCTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCTTTC-----ATCCA-CCA--------AGGATATC-GGACGGAAGATGGTCTCCCGTGTGTAACCGCACGCGGTTGGCCAAAATCCGAGC-AAGGGATGCAAGGAGCGTC-TCGATGTG-CGGTGGTGAATCGA--AGA-CTCGTCATACCGTCGT-ACGCTCTT-GTCCTTAAGC--TCTAGA---TGACCCTTATTTCTCAACGCGACCCCAGGTCAG Lma1 AAGGCCAGAGAGACTCCAAAATCACTCCTCATCCCTCCCAATGGGGACTGTCTTTAAAGCTGATTCCGGTGCCCGTTTGGTTCCGTGGTTTATGCGCACTGCCCCTGCCAACGGTCTTGCCTTGCAGGGAC----CTTGTCGCGTATCTTCCGGATATCACAAAACCCC-GGCACGAAAAGTGTCAAGGAACATGCAA---CCGAACGGCCC-TCATCCGCCG--TCCCGGAGACGGTGTGCGC-GCGGATGCGGTGCT-----GCGATCTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTA-CGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCTC-----ATCC-TCTA--------CGGATATT-GGACGGAAGATGGTCTCCCGTGTGGTACCGCACGCGGTTGGCCAAAATCAGAGATA-GGGATGCTAGGAGCGTCCTTGACATGTCGGTGGAGAATACA--AGC-CTGGTAAGAATCTCAT-GCGCTCGG-TAGCTCGCACCATACAGA---CGACCTGCAG-TCTCCACGGA-CCCCAGAGCGG Lma2 CAAAACAGAACGACCCGAGAACAACTTATCATCACTCCCAGCGGG-CCGGTCTCTTA-GCGGATTCCG-TGCCCGTT-GGTTCCGTGGTT-ATGCGCACTGCCCCTGCCAACGGTCTTGCCTTGCAGGGAC----CTTG-CGCGTATCTTCCGGATATCACAAAACCCC-GGCACGAAAAGTGTCAAGGAACATGCAA---CCGAACGGCCC-TCATCCGCCG--TCCCGGAGACGGTGTGCGC-GCGGATGCGGTGCT-----GCGATCTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCTC-----ATCC-TCTA--------CGGATATC-GGACGGAAGATGGTCTCCCGTGTGGTACCGCACGCGGTTGGCCAAAATCAGAGATA-GGGATGCTAGGAGCGTC-TCGACATG-CGGTGGTGAATACA--AGC-CTCGTCATATAATCGT-GCGCTCCT-TC-CCCGAACC-TCCAGA---TGACCCGAAACTCTCAACGCG-ACCCGGGTCAG Pal CAAAACAGAACGACCCGAGAACAATCGATCATTAC-TCTCGGCTGGCCGGTTTCTTA-GTTGATCCCGT-GCCTTCC-GATTCCGTGGTT-TTGCGTATGGTTCTTG--------------------------GATCTTGCGCAAAGCTTCCGGATATCACCAAACCCC-GGCACGAAAAGTGTCAAGGAACATGCAA---TTGAATAGC-CTGCGGTCGCCA--ACCCGGAGACGGTGTTTGT-GCGGACGTTGTGCT-----GTAATCTAAA-GTCTAAAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCTAAGCCTTCTGGCCGAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCACC----ATCC-TCTTA-------AGGATAT-GGGACGGAAGCTGGTCTCCCGTGTTTTACCGAATGCGGTTGGCCAAAATCCGAGC-AAAGGACGCCAGGAGCGTC-TCGAC-ATGCGGTGGTGAATTCA--AGC-CTCTTCATTTTGTCGG-TCGCTCT----GTCTGGAAGCTCTGA----TGACCCA?????????????????????????? Pca AAAAACAGAATGACCTGTGAATTAATGATCACTAC-TCTCGGTAGGCTTGTTTCTTA-GTTGATCATGC--CTTGCC-GATTCCGTGG----CATGTATAGATCCATATCAAGATTTCACTTCTTGGGTG---GATCATGCGCATAGCTTTCGGAAATAACAAAACCCC-GGCACGAAAAGTGTCAAGGAATATACAA---CTAAACAGC-ATGATTTTGTTGCTCACCGGAGACGGTGTKTCT-GCAGAATCTAGGCT-----GGAATATAAA-GTCTATAA-CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCCAAGCCTTTTGGTCAAGGGCACGTCTGCCTGGGTGTCACAAATCGTCGTCCCCC------ATCCTTCAT---------GGATATT-GGACGGAAGTTGKTCTCCCGTGTGTTACCGCACGCGGTTGGCCCAAATATGAGC-AAAGAACGTTGGGAACGTC-TTGAC-ATGCGGTGGTGAAATCA--AGC-CTCATCATTCTGTCAWCCGTCTCTT---GTTCTATTGTTTTTGA---TGACCC-AAGTCCTCTATGCGAACCCAGGTCAG Aab CAAAACAGAATGACCCGTGAACAATTGATCACCAC-TCGCGGTGAGCCAGAGCCTTA-ACCGGTTTTGC-GTTCACC-GACTCCATGGAT-CCGCGCACGGTCCTTTTCAGGGTTCTCTCTGGATTGTAACGTGATCG---GCTCTCCTT--GGATATCACGAAACCCC-GGCATTAAAAGTGCCAAGGAACATTGAA----CGAAATGGTTCGCGTTTGCAA---CCCGGAGACGGTGTGT---GCATACGTGGTGCC-----AGTATCTAAA-GTCTAAA--CGACTCTCGGCAACGGATATCTCAGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTCAAGCCTTCGGGCCGAGGGCACGTCTGCCTGGGTGTCACAAAACGTCGTCCCCCC-----ATCCATCTT---------GGATAA-GGGACGGAAATTGGTCTCCCGTGTGGTACCGCACGCGGTTGGCCTAAATCCGAGCCAAGGGCAGCAA-GACTGTC-CCGAC-TAGCGGTGGTGAA--CAAAAGC-CTCTTGTTATAGTCGGGTTGGTCTTCTTGTCCGTGAGCTTTAACA--TGCCCCAAAGTTTTCGATGCGACCCCAGGTCAG Asg CAAAACAGAATGACCCGTGAACAATTGATCATCAC-TCGCGGTGAGCCAGGGCCTTA-ACCGGTTTTGC-GTTCACC-GGCTCCATGGAT-CCGCGCATGGTCCTTTTCAGGGTTCTCTCTGGATTGTATCGTGATCG---GCTCTCCTT--GGATATCACAAAACCCC-GGCATTAAAAGTGCCAAGGAACATTGAA----CGAAATGGTCCACGTTTGCAA---CCCGGAGACGGTGTGC---GCATACGTGGTACT-----AGTATCTAAA-GTCTAAA--CGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCTCAAGCCTTCGGGCCGAGGGCACGTCTGCCTGGGTGTCACAAAACGTCGTCCCCCC-----ATCCATCTT---------GGATAA-GGGACGGAAGTTGGTCTCCCGTGTGGTACCGCATGCGGTTGGCCTAAATCCGAGCCAAGGGCAGCAAAGACTGTC-CCGAC-TAGCGGTGGTGAA--CAAAAGC-CTCTT??????????????????????????????????????????????????????????????????????????? [GAPMATRIX: absent='A' present='C' unknown='?'] Aut AACACACACACAAAAACAAAACCC??AAACAAACCAAAAAC?AAACACACCACAAAAAACAAACCACAAAAAAC?AC??AACAAACACACAAAAAAAACC?AACAAC??AAAAAAC?AAAA Cve AACACACACACAAAAACAAC??CC??AAACAAACCAAAAAC?AAACACACCACAAAAAACAAACCACAAAAAAC?AC??AACAAACACACAAAAAAAACACAACAAC??AAAAAAC?AAAA Pcs AACACACACACAAAAACAAC??CC??AAACAAACCAAAAAC?AAACACACCACAAAAAACAAACCACAAAAAAC?AC??AACAAACACACAACAAAAACACAACAAC??AAAAAAC?AAAA Fcl AAAACACACACAAAAACAAAAAAC??AAACAAACCAAAAAC?AAACACACCACAAAAAAAAAACCACAAAAAAC?AC??AACAAAAACACAAAAAAAACACAACAAC??AAAAAAC?AA?? Dve AAAACACACAAAAAAACAAC??CC??AAACAAACAAAAAAC?AAACACACCACAAAAAAAAAACCACAAAAAAC?AC??AAAAAACACACAAAAAAAACACAACAAC??AAAAAAC????? Ame AACACACACACAAAAAAACA?AAAAAAAACAAAC?CAAAAC?AAACACAACAAAAAAAA?CA??CACAAAAAAACAC??ACAAAACACACAAAAAACACACAAAAAC??AAAAAAC?AAAA Aob2 AACACACACACAAAAAAACA?AAAAAAAACAAACCAACAAACAAACACACCACAAAAAA?CA??CACAAAAAAACAC??ACAAAACACACAAAAAAAACACAAAAAC??AAAAAAC?AAAA Cjo AACACACACACAAAAAAAAAAAAAAAAAACAAACCAAAAAAAAAACACACCACAAAAAA?CA??CACAAAAAAACAC??ACAAAACACACAAAACAAACACAAAAAC??AAAAAAC?AAAA Amo1 AACACAAACACAAAAAAAAACAAACAAAACAAACCAACAAC?AAAAACACCACAAAAAAAAAAACAAAAAAAAAAAC??AAAAAACACACAAAA?C?????ACAAAACAAAAAAAC?CAAA Bor AACACACACACCAAAAAC?????AAAAAACAAAC?CAAAAC?AAC?ACAACC?AAAAAAAAAAAAAAAAAAAAAAAAACAAAACACACACAAAAAACACACAACAAA?CACAAAAC?AAAA Gma AACACACACACCAAAAAAAAAAAAAAAAACAAAC?CAAAAC?AAC?ACACCC?AAAAAAAAAAAAAAAACAAAAAAAACAAAAAACACACAAAAAACACACAACAAA?CAAAAAAC?AAAA Bba1 AACACACACACAAAAACAAAAAAAACACA?AAAACAAAAAC?AAACACACCACAAAAAA?CA??AA?C??AAA??AACAAAAAAACACACAAAAAACACACAACAAC??AAAAAAC?A??? Bba2 AACACACACACAAAAACAAAAAAAACAAACAAAACAAAAAC?AAACACACCACAAAAAA?CA??AA?C??AAA??AACAAAAAAACACACAAAAAACACACAACAAC??AAAAAAC?AAAA Bty1 AACACACACACAAAAACAAAAAAAACAAACAAAACAAAAAC?AAACACACCACAAACAA?CA??AA?C??AAA??AACAAAAAAACACACAAAAAACACACAACAAC??AAAAAAC?AAAA Lem2 AACACACACACAAAAACAAAAAAAACAAACAAACCAAAAAC?AAACACACCACAAAAAA?CA??AA?C??AAA??AACAAAAAAACACACAAAAAACACACAACAAC??AAA????????? Lem1 ????????????AAAACAAAAAAAAAACA?AAAC?CAAAAACAAACACACCACAAAAAA?CA??AAAAAAC?????A?AAAAAAACACACAAAAAAAC?ACAACAAC??AAAAAAAAAA?? Pcy AACACACACACAACAACAAAAAAAACAAACAAACCAAAAAC?AAACACACCACAAAAAA?CA??AA?C??AAA??AACAAAAAAACACACAAAAAACACACAACAAC??AAA????????? Pru AACACACACACAAAAACAAAAAAAACAAACAAACCAAAAAC?AAACACACCACAAAAAA?CA??AA?C??AAA??AACAAAAAAACACACAAAAAACACACAACAAC??AAA????????? Hlo AACACACACACAAACA?AAAAAAAAAAAAAAAACCAAAAAC?AAACAAAACACACAAAAAAAC?AAAAC?AAA??AACAAAAACACACACAAAAAACACACCAAAAC??AAAAAAAAAAAA Akl2 ACAACACACACAAACA?AAAAAAAAAC?A?AAAC?CAACAC?AAACA?C?CACAAAAAA?CA??AA?C??AAA??CAAAC?AAACAACAAAAAAAAAAAACAA?CAC??AACAAC??AAAC Aau ????CACACACAAACA?AAAAAAAAAAAACAAAC?CAAAAACAAACACACCACAAAAAA??C??AAAAAAAAAAAAAAAAAAAAAAA?CCAAAAAAAACACAAAAAC??AAAAAAC?AAAA Asa1 AACACACACACAC??A?A?????AAAAAACAAAC?CAAAAC?AAA?CCACCACCAAAAA??C??AAAAAAAAAAAAAAAAACAACAACA?CAAAAAAAAAAAACAAC??AAAAAAC?AA?? Asa2 AACACACACACAC??A?A?????AAAAAACAAAC?CAAAAC?AAA?CCACAACAAAAAA??C??AAAAAAAAAAAAAAAAACAACAACACAAAAAAAAAAAAACAAC??AAA????????? Fae CAACCCAAAACAAAAAAAAAAAAAAAA?C?ACAC?CAAACC?AAACA?C?CACAAAAAC??A??ACAAAAAC????AAAAAACACAACAAACAAAAAC?ACAACAAACAAAAC?AC?AAAA Lma1 AAAAAAAAAAAAAAAAAAAAAAAAAAA?C?AAAC?CAAACC?AAACA?C?CACAACAAC??A??CAAAAAAC????AAAAAACAACAAAAAAAAAAAC?ACAACAAACAAAAAAAC?ACCA Lma2 AAACCCAACACAAAAAAAAAAAAAAAA?C?ACAC?CAAACC?AAACA?C?CACAAAAAC??A??CAAAAAAC????AAAAAACAACACAAACAAAAAC?ACAACAAACACAAACAC?AACA Pal ACAACACACACAAA?C????????????A?AAAC?CAACAC?AAACA?C?CACAAAAAA?CA??CAAAAAAAC???AAAAACAACAACACAAAAAAAC?ACAACAC???AAAAAC??A??? Pca ACAACA?CCC?AAAAAAAAAAAAAAAC?A?AAAC?CAACAAAAAACA?C?CACAAA?C???A??AAAAAAC?????A?AAAACACAACACAAAAAAAC?ACAAAAAC??AAAAAAC?CAAA Aab ACAACACACACAAAAAAAAAAAAAAAAAAAC?CC??CAAA??CC??A?C?CC?AAAAAC??A??AAAAAAC?????A?AAACAAAACCACAAACAAAAAACAAAAAAAAAAAAAAACAAAA Asg ACAACACACACAAAAAAAAAAAAAAAAAAAC?CC??CAAA??CC??A?C?CC?AAAAAC??A??AAAAAAC?????A?AAACAAAAACACAAACAAAAAACA??????????????????? [GAPLIST: * = gap uninformative] [ no. base pos. #occ first occurrence] [ 1: 27 - 27 1* Fae ] [ 2: 36 - 36 5 Akl2 ] [ 3: 39 - 39 18 Aut ] [ 4: 46 - 46 2 Fae ] [ 5: 58 - 58 28* Aut ] [ 6: 69 - 69 2 Fae ] [ 7: 70 - 70 24 Aut ] [ 8: 70 - 71 1* Pca ] [ 9: 78 - 78 27 Aut ] [ 10: 89 - 92 1* Pca ] [ 11: 91 - 91 26 Aut ] [ 12: 103 - 104 2 Bor ] [ 13: 104 - 119 2 Asa1 ] [ 14: 106 - 106 1* Pcy ] [ 15: 108 - 109 3 Hlo ] [ 16: 108 - 133 1* Pal ] [ 17: 109 - 109 12 Aut ] [ 18: 111 - 123 1* Bor ] [ 19: 112 - 113 2 Ame ] [ 20: 113 - 114 3 Cve ] [ 21: 113 - 113 1* Amo1 ] [ 22: 114 - 114 1* Aut ] [ 23: 118 - 118 4 Aut ] [ 24: 123 - 129 5 Aut ] [ 25: 124 - 124 1* Amo1 ] [ 26: 129 - 129 6 Bba1 ] [ 27: 131 - 133 2 Akl2 ] [ 28: 132 - 133 2 Bba1 ] [ 29: 132 - 135 3 Fae ] [ 30: 133 - 133 19 Aut ] [ 31: 139 - 141 2 Aab ] [ 32: 140 - 140 2 Fae ] [ 33: 151 - 152 2 Aab ] [ 34: 170 - 170 27 Aut ] [ 35: 199 - 200 14* Aut ] [ 36: 199 - 201 13 Ame ] [ 37: 199 - 202 2 Aab ] [ 38: 204 - 204 2 Aob2 ] [ 39: 211 - 211 3 Akl2 ] [ 40: 213 - 213 3 Fae ] [ 41: 224 - 225 23 Aut ] [ 42: 224 - 224 3 Aob2 ] [ 43: 224 - 226 2 Aab ] [ 44: 243 - 245 2 Aab ] [ 45: 244 - 245 2 Bor ] [ 46: 245 - 245 23* Aut ] [ 47: 245 - 246 2 Asa1 ] [ 48: 260 - 261 21* Aut ] [ 49: 260 - 264 8 Akl2 ] [ 50: 264 - 264 19 Aut ] [ 51: 275 - 275 29* Aut ] [ 52: 283 - 284 4 Bor ] [ 53: 284 - 284 25* Aut ] [ 54: 309 - 309 1* Asa1 ] [ 55: 310 - 310 1* Hlo ] [ 56: 333 - 333 1* Lma1 ] [ 57: 458 - 458 1* Bty1 ] [ 58: 458 - 463 1* Pca ] [ 59: 459 - 463 5 Fae ] [ 60: 460 - 460 3 Aut ] [ 61: 460 - 463 12 Ame ] [ 62: 460 - 464 3 Aau ] [ 63: 461 - 463 1* Hlo ] [ 64: 463 - 463 5 Aut ] [ 65: 468 - 468 12 Aut ] [ 66: 469 - 469 1* Fae ] [ 67: 470 - 470 8 Aut ] [ 68: 470 - 477 7 Bba1 ] [ 69: 471 - 477 1* Hlo ] [ 70: 472 - 475 1* Gma ] [ 71: 473 - 481 4 Lem1 ] [ 72: 473 - 480 3 Fae ] [ 73: 474 - 480 1* Pal ] [ 74: 475 - 477 5 Aut ] [ 75: 476 - 477 3 Ame ] [ 76: 480 - 480 1* Akl2 ] [ 77: 481 - 483 9 Aut ] [ 78: 481 - 481 7 Bba1 ] [ 79: 483 - 483 2 Bor ] [ 80: 486 - 487 1* Akl2 ] [ 81: 487 - 487 3 Ame ] [ 82: 488 - 488 9 Aut ] [ 83: 489 - 489 4 Fae ] [ 84: 518 - 518 2 Bor ] [ 85: 544 - 544 6 Akl2 ] [ 86: 546 - 546 20 Aut ] [ 87: 556 - 556 1* Aab ] [ 88: 564 - 564 28* Aut ] [ 89: 564 - 565 1* Aau ] [ 90: 570 - 570 25 Aut ] [ 91: 570 - 571 1* Asa1 ] [ 92: 573 - 573 2 Fae ] [ 93: 582 - 582 1* Pcs ] [ 94: 584 - 585 2 Aab ] [ 95: 586 - 586 1* Cjo ] [ 96: 586 - 594 1* Amo1 ] [ 97: 587 - 587 10 Ame ] [ 98: 588 - 589 6 Lem1 ] [ 99: 589 - 589 18 Aut ] [ 100: 593 - 594 1* Aut ] [ 101: 593 - 593 26 Cve ] [ 102: 596 - 601 1* Hlo ] [ 103: 609 - 609 1* Amo1 ] [ 104: 610 - 610 20 Aut ] [ 105: 610 - 611 1* Akl2 ] [ 106: 618 - 621 1* Pal ] [ 107: 619 - 621 21 Aut ] [ 108: 619 - 619 4* Amo1 ] [ 109: 619 - 620 2 Bor ] [ 110: 622 - 622 1* Lma2 ] [ 111: 623 - 623 1* Bor ] [ 112: 625 - 625 1* Akl2 ] [ 113: 630 - 631 1* Fae ] [ 114: 631 - 631 1* Lma2 ] [ 115: 637 - 640 2 Akl2 ] [ 116: 638 - 640 20 Aut ] [ 117: 639 - 640 1* Aab ] [ 118: 647 - 647 2 Amo1 ] [ 119: 651 - 651 1* Lma1 ] [ 120: 662 - 662 2 Lma1 ] [ 121: 667 - 667 1* Akl2 ] ; END; BEGIN SETS; charset region1_nuc = 1-673; charset region1_gaps = 674-794; charset gaps = region1_gaps ; END;