URL

EMBL–EBI Home Page

www.ebi.ac.uk/

EMBL Nucleotide Sequence Database

www.ebi.ac.uk/embl/index.html

EMBL Database Documentation Page

www.ebi.ac.uk/embl/Documentation/

Database User manual

www.ebi.ac.uk/embl/Documentation/User_manual/usrman.html

Database Release Notes

www.ebi.ac.uk/embl/Documentation/Release_notes/current/relnotes.html

The DDBJ/EMBL/GenBank Feature Table Doc.

www.ebi.ac.uk/embl/Documentation/FT_definitions/feature_table.html

Taxonomy Database

www3.ncbi.nlm.nih.gov/Taxonomy/tax.html

Example Database Entry

www.ebi.ac.uk/cgi-bin/emblfetch?x64011

WEBALIGN: Sequence Alignment Submissions

www.ebi.ac.uk/embl/Submission/alignment.html

WebFeat: feature table keys/qualifiers definitions

www3.ebi.ac.uk/Services/WebFeat/

Annotation Examples: EMBL entry examples.

www3.ebi.ac.uk/Services/Standards/web/

DE Line Standards: guidelines for entry definitions

www.ebi.ac.uk/embl/Documentation/de_line_standards.html

Sites maintaining daily updated copies of EMBL

www.ebi.ac.uk/embl/Access/other_sites.html

Submission of Nucleotide Sequence Data

www.ebi.ac.uk/embl/Submission/index.html

Information for Submitters Document

www.ebi.ac.uk/embl/Documentation/information_for_submitters.html

Vectors Scanning: to check for potential vector contamination prior to submission

www2.ebi.ac.uk/blastall/vectors.html

WEBIN: web-based sequence submission system

www.ebi.ac.uk/embl/Submission/index.html

SEQUIN: stand-alone sequence submission tool

www3.ebi.ac.uk/Services/Sequin/

Genome Project Submission Account guidelines

www3.ebi.ac.uk/Services/GenomeSubm/

WEBUP: sequence update form

www3.ebi.ac.uk/Services/webin/update/update.html

Access to servers, query tools and data archives

www.ebi.ac.uk/embl/Access/index.html

Sequence Retrieval Service (SRS)

http://srs.ebi.ac.uk/

Current Database Release

ftp://ftp.ebi.ac.uk/pub/databases/embl/release/

Sequence Tagged Sites (STS) resources

www.ebi.ac.uk/embl/Access/sts.html

Expressed Sequence Tag (EST) resources

www.ebi.ac.uk/embl/Access/est.html

Sequences from the patent literature

ftp://ftp.ebi.ac.uk/pub/databases/embl/patent/

Completed Genomes Web Server

www.ebi.ac.uk/genomes/

Genome FTP server

ftp://ftp.ebi.ac.uk/pub/databases/embl/genomes/

EnsEMBL: automated analysis of genome data

http://ensembl.ebi.ac.uk/

Genome MOT: status of genome projects

www.ebi.ac.uk/Databases/Genome_MOT/genome_mot.html

Access to searching, browsing and analysis tools

www.ebi.ac.uk/Tools/index.html

Fasta3 sequence similarity and homology searching

www.ebi.ac.uk/fasta3/

Wu-Blast2

www.ebi.ac.uk/blast2/

Completed Genomes and Proteomes fasta3 server

www.ebi.ac.uk/fasta33/genomes.html

Parasite Genomes blast server

www.ebi.ac.uk/blast2/parasites.html

ClustalW: Multiple sequence alignments

www.ebi.ac.uk/clustalw/

MPsrch: new Smith and Waterman algorithm

www.ebi.ac.uk/MPsrch/