Table S4: Gene list of the category "metal homeostasis" AGI ID Affy ID Annotation - for multiple identifier mappings only the annotation for the first identifier is shown, except in the case of the multi-line output option At1g55670 264545_at PSAG (PHOTOSYSTEM I SUBUNIT G) At1g47400 261684_at unknown protein At3g27060 257809_at "TSO2 (TSO meaning 'ugly' in Chinese); oxidoreductase/ ribonucleoside-diphosphate reductase/ transition metal ion binding " At3g52400 252053_at "ATSYP122__SYP122 (SYNTAXIN OF PLANTS 122); SNAP receptor " At3g14100 257002_at oligouridylate-binding protein, putative At1g23020 264751_at "ATFRO3__FRO3; ferric-chelate reductase " At2g18690 266017_at unknown protein At1g57630 246405_at disease resistance protein (TIR class), putative At3g13610 256647_at oxidoreductase, 2OG-Fe(II) oxygenase family protein At2g04450 263852_at "ATNUDT6 (Arabidopsis thaliana Nudix hydrolase homolog 6); ADP-ribose diphosphatase/ NAD or NADH binding / hydrolase " At2g04050 263402_at MATE efflux family protein At4g16370 245296_at "OPT3__ATOPT3 (OLIGOPEPTIDE TRANSPORTER); oligopeptide transporter " At3g18290 257062_at "EMB2454 (embryo defective 2454); protein binding / zinc ion binding " At3g07800 259224_at thymidine kinase, putative At1g05680 263231_at UDP-glucoronosyl/UDP-glucosyl transferase family protein At5g53450 248270_at "ORG1 (OBP3-responsive gene 1); ATP binding / kinase/ protein kinase " At3g50930 252131_at "BCS1 (CYTOCHROME BC1 SYNTHESIS); ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding " At2g41730 260522_x_at unknown protein At1g50240 262467_at 262474_at "FU (FUSED); protein serine/threonine kinase " At4g04500 255341_at protein kinase family protein At2g04070 263401_at antiporter/ drug transporter/ transporter At4g02390 255500_at "ATPARP1_PARP1__APP (ARABIDOPSIS POLY(ADP-RIBOSE) POLYMERASE); NAD+ ADP-ribosyltransferase/ nucleic acid binding " At1g71330 259937_s_at "ATNAP5; ATPase, coupled to transmembrane movement of substances / transporter " At1g09080 264648_at "BIP3; ATP binding " At4g23810 254231_at "ATWRKY53__WRKY53; DNA binding / protein binding / transcription activator/ transcription factor " At1g74710 262177_at EDS16_ICS1_SID2__isochorismate synthase 1 (ICS1) / isochorismate mutase At5g60800 247594_at heavy-metal-associated domain-containing protein At4g39670 252908_at glycolipid binding / glycolipid transporter At5g64000 247314_at "ATSAL2__SAL2; 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase " At1g20350 255941_at "ATTIM17-1; P-P-bond-hydrolysis-driven protein transmembrane transporter/ protein transporter " At1g72060 256337_at serine-type endopeptidase inhibitor At5g11510 250386_at "AtMYB3R4__MYB3R-4 (myb domain protein 3R-4); DNA binding / transcription coactivator/ transcription factor " At3g44350 252681_at "anac061 (Arabidopsis NAC domain containing protein 61); transcription factor " At3g01830 258947_at calmodulin-related protein, putative At5g39670 249417_at calcium-binding EF hand family protein At1g49910 245814_at WD-40 repeat family protein / mitotic checkpoint protein, putative At1g12030 257421_at unknown protein At2g46400 263783_at "AtWRKY46__WRKY46; transcription factor " At3g06030 258471_at "MAPKKK12__ANP3 (ARABIDOPSIS NPK1-RELATED PROTEIN KINASE 3); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase " At1g66960 255912_at lupeol synthase, putative / 2,3-oxidosqualene-triterpenoid cyclase, putative At2g35190 266489_at "ATNPSN11_NSPN11__NPSN11 (NOVEL PLANT SNARE 11); SNAP receptor/ protein transporter " At1g61450 264763_at unknown protein At4g21070 254443_at "ATBRCA1; ubiquitin-protein ligase " At1g12520 259511_at "ATCCS (COPPER CHAPERONE FOR SOD1); superoxide dismutase/ superoxide dismutase copper chaperone " At4g11080 254964_at high mobility group (HMG1/2) family protein At3g54560 251846_at "HTA11; DNA binding " At1g74670 260221_at gibberellin-responsive protein, putative At1g33940 260118_s_at "FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: EMB3013 (embryo defective 3013); ATP binding / binding / kinase/ protein kinase/ protein serine/threonine kinase (TAIR:AT5G18700.1). " At1g65500 264635_at unknown protein At5g13320 250286_at GDG1_WIN3_WIN3__PBS3 (AVRPPHB SUSCEPTIBLE 3) At4g33400 253357_at dem protein-related / defective embryo and meristems protein-related At5g48720 248668_at XRI1 (X-RAY INDUCED TRANSCRIPT 1) At1g69400 260349_at transducin family protein / WD-40 repeat family protein At5g02100 251037_at "UNE18 (UNFERTILIZED EMBRYO SAC 18); oxysterol binding / sterol binding " At5g02220 251035_at unknown protein At5g58120 247848_at disease resistance protein (TIR-NBS-LRR class), putative At5g07810 250601_at SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein At5g01540 251054_at "LECRKA4.1 (LECTIN RECEPTOR KINASE A4.1); kinase " At2g39870 267339_at unknown protein At5g50200 248551_at "ATNRT3.1_NRT3.1__WR3 (WOUND-RESPONSIVE 3); nitrate transmembrane transporter " At5g57410 247910_at unknown protein At5g22380 249940_at "anac090 (Arabidopsis NAC domain containing protein 90); transcription factor " At5g02430 251049_at WD-40 repeat family protein At1g04980 261167_at "ATPDI10_PDI10__ATPDIL2-2 (PDI-LIKE 2-2); protein disulfide isomerase " At3g61630 251282_at "CRF6 (CYTOKININ RESPONSE FACTOR 6); DNA binding / transcription factor " At4g17240 245411_at unknown protein At2g45490 267529_at "AtAUR3 (ATAURORA3); ATP binding / histone kinase(H3-S10 specific) / protein kinase " At5g62710 247441_at leucine-rich repeat family protein / protein kinase family protein At1g22400 261934_at "ATUGT85A1__UGT85A1; UDP-glycosyltransferase/ cis-zeatin O-beta-D-glucosyltransferase/ glucuronosyltransferase/ trans-zeatin O-beta-D-glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups " At3g48150 252349_at "CDC23__APC8 (ANAPHASE-PROMOTING COMPLEX SUBUNIT 8); binding " At1g54960 256351_at "MAPKKK2__ANP2; MAP kinase kinase kinase/ kinase " At2g26180 267402_at "IQD6 (IQ-domain 6); calmodulin binding " At5g43910 249096_at pfkB-type carbohydrate kinase family protein At1g09000 264623_at "MAPKKK1__ANP1 (ARABIDOPSIS NPK1-RELATED PROTEIN KINASE 1); MAP kinase kinase kinase/ kinase " At5g63950 247310_at "CHR24 (chromatin remodeling 24); ATP binding / DNA binding / helicase/ nucleic acid binding " At5g39550 249457_s_at "ORTH1__VIM3 (VARIANT IN METHYLATION 3); methyl-CpG binding / methyl-CpNpG binding / methyl-CpNpN binding / protein binding / ubiquitin-protein ligase/ zinc ion binding " At4g12470 254818_at protease inhibitor/seed storage/lipid transfer protein (LTP) family protein At1g22890 264774_at unknown protein At1g66090 256526_at disease resistance protein (TIR-NBS class), putative At3g48210 252351_at "FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, D bilateral stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex, subunit Spc25 (InterPro:IPR013255); Has 142 Blast hits to 142 proteins in 51 species: Archae - 0; Bacteria - 2; Metazoa - 61; Fungi - 34; Plants - 34; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). " At1g72250 259851_at kinesin motor protein-related At3g54630 251844_at "FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinetochore protein Ndc80 (InterPro:IPR005550); Has 19800 Blast hits to 12108 proteins in 845 species: Archae - 345; Bacteria - 1709; Metazoa - 11031; Fungi - 1499; Plants - 797; Viruses - 39; Other Eukaryotes - 4380 (source: NCBI BLink). " At3g01410 258952_at RNase H domain-containing protein At1g63990 262335_at "SPO11-2 (SPORULATION 11-2); ATP binding / DNA binding / DNA topoisomerase (ATP-hydrolyzing)/ catalytic " At4g01720 255596_at "AtWRKY47__WRKY47; transcription factor " At5g02370 251046_at kinesin motor protein-related At3g09520 258752_at "ATEXO70H4 (exocyst subunit EXO70 family protein H4); protein binding " At3g01330 257524_at "E2FF_E2L2__DEL3 (DP-E2F-LIKE PROTEIN 3); DNA binding / transcription factor " At1g15660 261761_at CENP-C (CENTROMERE PROTEIN C) At5g05180 250823_at unknown protein At1g69770 260417_at "CMT3 (chromomethylase 3); DNA (cytosine-5-)-methyltransferase " At1g72240 259850_at unknown protein At1g56510 259629_at "WRR4 (WHITE RUST RESISTANCE 4); ATP binding / nucleoside-triphosphatase/ nucleotide binding / transmembrane receptor " At5g49520 248611_at "AtWRKY48__WRKY48; transcription factor " At5g47850 248775_at "CCR4 (ARABIDOPSIS THALIANA CRINKLY4 RELATED 4); kinase " At4g28390 253776_at "ATAAC3__AAC3 (ADP/ATP CARRIER 3); ATP:ADP antiporter/ binding " At4g12480 254805_at "pEARLI 1; lipid binding " At5g17330 250090_at "GAD1__GAD; calmodulin binding / glutamate decarboxylase " At3g54750 251852_at unknown protein At2g32030 265725_at GCN5-related N-acetyltransferase (GNAT) family protein At4g14970 245585_at unknown protein At3g27190 257174_at uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putative At5g48600 248658_at "ATCAP-C_ATSMC4__ATSMC3 (ARABIDOPSIS THALIANA STRUCTURAL MAINTENANCE OF CHROMOSOME 3); ATP binding / transporter " At1g51920 246370_at unknown protein At5g60930 247603_at chromosome-associated kinesin, putative At2g40010 267349_at 60S acidic ribosomal protein P0 (RPP0A) At2g32020 265668_at GCN5-related N-acetyltransferase (GNAT) family protein At2g25000 263536_at "ATWRKY60__WRKY60; transcription factor " At4g05520 255236_at "ATEHD2 (EPS15 HOMOLOGY DOMAIN 2); GTP binding / GTPase/ calcium ion binding " At1g09450 264550_at haspin-related At1g68690 262228_at ATP binding / protein kinase/ protein serine/threonine kinase At3g20490 257086_at unknown protein At2g38620 266401_s_at "CDKB1;2 (cyclin-dependent kinase B1;2); cyclin binding / kinase/ protein serine/threonine kinase " At5g04860 246982_s_at unknown protein At1g14360 261485_at "ATUTR3__UTR3 (UDP-GALACTOSE TRANSPORTER 3); pyrimidine nucleotide sugar transmembrane transporter " At1g35780 261286_at unknown protein At4g22753 254333_at "ATSMO1_ATSMO1-3__SMO1-3 (STEROL 4-ALPHA METHYL OXIDASE 1-3); 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase/ catalytic " At2g23270 245082_at unknown protein At3g26440 256883_at unknown protein At3g61360 251313_at pentatricopeptide (PPR) repeat-containing protein At3g17690 258377_at "CNGC19__ATCNGC19; calmodulin binding / cyclic nucleotide binding / ion channel " At1g53490 260973_at DNA binding At1g02690 260910_at "IMPA-6 (IMPORTIN ALPHA ISOFORM 6); binding / protein transporter " At1g63440 261551_at "HMA5 (HEAVY METAL ATPASE 5); ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism " At2g20110 265592_at tesmin/TSO1-like CXC domain-containing protein At1g72670 259912_at "iqd8 (IQ-domain 8); calmodulin binding " At2g18450 265329_at "SDH1-2; succinate dehydrogenase " At4g34510 253240_at "KCS17 (3-KETOACYL-COA SYNTHASE 17); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups " At1g74770 262217_at 262218_at protein binding / zinc ion binding At3g21850 257944_at "ASK9 (ARABIDOPSIS SKP1-LIKE 9); protein binding / ubiquitin-protein ligase " At3g56980 251677_at "ORG3__BHLH039; DNA binding / transcription factor " At4g19680 254534_at "IRT2; iron ion transmembrane transporter/ zinc ion transmembrane transporter " At3g07720 259228_at kelch repeat-containing protein At5g04150 245692_at "BHLH101; DNA binding / transcription factor " At3g58810 251545_at "ATMTPA2_MTP3__MTPA2 (METAL TOLERANCE PROTEIN A2); efflux transmembrane transporter/ inorganic anion transmembrane transporter/ zinc ion transmembrane transporter " At2g30660 267572_at 3-hydroxyisobutyryl-coenzyme A hydrolase, putative / CoA-thioester hydrolase, putative At3g50740 252183_at "UGT72E1 (UDP-glucosyl transferase 72E1); UDP-glycosyltransferase/ coniferyl-alcohol glucosyltransferase/ transferase, transferring glycosyl groups " At5g52670 248316_at heavy-metal-associated domain-containing protein At1g74770 262217_at 262218_at protein binding / zinc ion binding At4g37430 253101_at "CYP81F1__CYP91A2 (CYTOCHROME P450 MONOOXYGENASE 91A2); electron carrier/ heme binding / iron ion binding / monooxygenase/ oxygen binding " At3g48640 252345_at unknown protein