Rapid Identification and Validation of Specific Molecular Targets for Detection of Escherichia coli O104:H4 Outbreak Strain by Use of High-Throughput Sequencing Data from Nine Genomes
J. Clin. Microbiol. Ho et al. 49: 3714

Supplemental Material

Files in this Data Supplement:

  • Supplemental Figure 1 - Table S1 (List of E. coli O104:H4 isolates used for ssGeneFinder analysis)
    MS Word document, 34K.
  • Supplemental Figure 2 - Table S2 (Escherichia, Salmonella, and Shigella genomes used in in silico substraction by ssGeneFinder)
    MS Word document, 127K.
  • Supplemental Figure 3 - Table S3 (Putatively specific conserved targets for outbreak strain E. coli O104:H4 generated by ssGeneFinder)
    MS Word document, 43K.
  • Supplemental Figure 4 - Table S4 (E. coli isolates, stool samples, and environmental soil samples used for specificity screening)
    MS Word document, 31K.
  • Supplemental Figure 5 - Supplemental methods
    MS Word document, 31K.