Edited EST: CN414413, type: ag Aligns to: chr10:104660591-104660845 (++) All mismatches: ag (258), ag (270), ag (271), ag (292), ag (295), ag (296), ag (301), ag (309), ag (310), ag (337), ag (339), ag (389), ag (392), Editing mismatches: 13, all mismatches: 13, alignment length: 255, cluster length: 135, total number of As: 43 Locations in RNA: 258 270 271 292 295 296 301 309 310 337 339 389 392 Locations in genome: 104660642 104660654 104660655 104660676 104660679 104660680 104660685 104660693 104660694 104660721 104660723 104660773 104660776 Upstream nucleotide (in genome): t c a t c a t a a t t a t Upstream nucleotide summary: a: 5, c: 2, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): c a c c a a c a t t g g g Downstream nucleotide summary: a: 4, c: 4, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 1, ca: 2, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 3, tg: 2, tt: 1, other: 0 >chr10:104660591-104660845 (+) agcactttgggaggccgaggcaggcagatcacctgaggtcaggagtttgataccagcctggccaacatggtgaaatcctgtctctaccaaaaatacaaaaaaaattagctgggcatggtggtgcacacctatagtctcagctactcgggaggctgaggcaggagaattgcttgaacccaggaagtagaggctgcagtgagtaagcatcacgccactgtactccagcctgggcaacagagcaagactctgtctcaa >CN414413:207-461 (+) agcactttgggaggccgaggcaggcagatcacctgaggtcaggagtttgatgccagcctggccggcatggtgaaatcctgtctctgccggaaatgcaaaaaaggttagctgggcatggtggtgcacacctgtggtctcagctactcgggaggctgaggcaggagaattgcttgaacccaggaggtggaggctgcagtgagtaagcatcacgccactgtactccagcctgggcaacagagcaagactctgtctcaa End editing Edited EST: DA415752, type: ag Aligns to: chr10:116867087-116867638 (++) All mismatches: ag (18), ag (21), ag (28), ag (33), ag (70), ag (76), ag (83), ag (143), ag (150), ag (166), ag (182), ag (191), Editing mismatches: 12, all mismatches: 12, alignment length: 552, cluster length: 174, total number of As: 52 Locations in RNA: 18 21 28 33 70 76 83 143 150 166 182 191 Locations in genome: 116867104 116867107 116867114 116867119 116867156 116867162 116867169 116867229 116867236 116867252 116867268 116867277 Upstream nucleotide (in genome): t c c a g t t a c t g t Upstream nucleotide summary: a: 2, c: 3, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): a g a g a g a g g g g g Downstream nucleotide summary: a: 4, c: 0, g: 8, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 1, cc: 0, cg: 2, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 0, tg: 3, tt: 0, other: 0 >chr10:116867087-116867638 (+) aaaagaaaaaaaggggtaacaggccccaaataagtccagaacccaacagaacaaacaatgttaaatctgaaagctagagaataatcttttttgactttatgtttcgccttctgagcatacttggatgaggattgggctcccaagacctcaggcagcccagcccttaggctttgctgggctgagcctacatagcagctctcatgggttggaggctcatgcctgccgctcttatagtctgaggctgcacatgggtgactctatagttctgaggtctcagaggcagccctgctcccatggccctattaggcattgctctagcaagtactttatgatgagtctgctgctgtagcatcctttcagatctacattgaggtagccgcatctccacaacttgtgcagtctgtgcacctgcagaattggcaccacatggatggataccaccaaggtttatttcctatacttttcagagctgcagccagagacacaccctggtttgcttgaacagtgactggggaggctaagggaagctgtgccagaatgcagggagcagat >DA415752:1-552 (+) aaaagaaaaaaaggggtgacgggccccgaataggtccagaacccaacagaacaaacaatgttaaatctggaagctggagaatgatcttttttgactttatgtttcgccttctgagcatacttggatgaggattgggctcccaggacctcgggcagcccagcccttgggctttgctgggctgggcctacatggcagctctcatgggttggaggctcatgcctgccgctcttatagtctgaggctgcacatgggtgactctatagttctgaggtctcagaggcagccctgctcccatggccctattaggcattgctctagcaagtactttatgatgagtctgctgctgtagcatcctttcagatctacattgaggtagccgcatctccacaacttgtgcagtctgtgcacctgcagaattggcaccacatggatggataccaccaaggtttatttcctatacttttcagagctgcagccagagacacaccctggtttgcttgaacagtgactggggaggctaagggaagctgtgccagaatgcagggagcagat End editing Edited EST: DW424692, type: ag Aligns to: chr10:11899448-11899735 (++) All mismatches: ag (1), ag (2), tc (9), ag (100), ag (110), ag (134), ag (153), ag (176), ag (202), ag (205), ag (206), ag (207), ag (208), ag (211), ag (217), ag (253), Editing mismatches: 15, all mismatches: 16, alignment length: 287, cluster length: 254, total number of As: 59 Locations in RNA: 1 2 100 110 134 153 176 202 205 206 207 208 211 217 253 Locations in genome: 11899448 11899449 11899548 11899558 11899582 11899601 11899624 11899650 11899653 11899654 11899655 11899656 11899659 11899665 11899701 Upstream nucleotide (in genome): n a c a g c a c g a a a c a c Upstream nucleotide summary: a: 7, c: 5, g: 2, t: 0, other: 1 Downstream nucleotide (in genome): a c g c a g t g a a a t c c c Downstream nucleotide summary: a: 5, c: 5, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 0, at: 2, ca: 0, cc: 2, cg: 3, ct: 0, ga: 2, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr10:11899448-11899735 (+) aaccattattggccgggtgcagtggctcacgcctgtctgtcatcccagcactttgggaggcccaggtgggtggatcatctgaggtcaggatttggagaccagcctggccaacatggtgaaactccgtctctacgaaaaatacaaaaattagccaggcgtggtgacgcgtgcctgtaatcccagctgctccggaggctgaggcaggaaaatcacttgaacccgggtggcggaggttgcagtgagccgagatcgcaccactgcactccagcctgggcaacagatggagac >DW424692:1-287 (+) ggccatta-cggccgggtgcagtggctcacgcctgtctgtcatcccagcactttgggaggcccaggtgggtggatcatctgaggtcaggatttggagaccggcctggccagcatggtgaaactccgtctctacggaaaatacaaaaattagccgggcgtggtgacgcgtgcctgtagtcccagctgctccggaggctgaggcgggggggtcgcttgagcccgggtggcggaggttgcagtgagccgagatcgcgccactgcactccagcctgggcaacagatggagac End editing Edited EST: DW425339, type: ag Aligns to: chr10:12162928-12163213 (++) All mismatches: ag (36), ag (37), ag (45), ag (58), ag (59), ag (77), ag (82), ag (96), ag (105), ag (106), ag (114), ag (116), ag (127), ag (130), ag (139), ag (142), ag (145), ag (165), ag (198), ag (199), ag (213), ag (237), ag (241), ag (247), ag (249), ag (279), Editing mismatches: 26, all mismatches: 26, alignment length: 286, cluster length: 244, total number of As: 61 Locations in RNA: 36 37 45 58 59 77 82 96 105 106 114 116 127 130 139 142 145 165 198 199 213 237 241 247 249 279 Locations in genome: 12162963 12162964 12162972 12162985 12162986 12163004 12163009 12163023 12163032 12163033 12163041 12163043 12163054 12163057 12163066 12163069 12163072 12163092 12163125 12163126 12163140 12163164 12163168 12163174 12163176 12163206 Upstream nucleotide (in genome): t a c c a g c c c a g a t t a a t c c a a g c c c c Upstream nucleotide summary: a: 8, c: 11, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): a t c a g g g g a c a c c a a a g c a g t g g c c a Downstream nucleotide summary: a: 9, c: 7, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 2, at: 2, ca: 4, cc: 4, cg: 3, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr10:12162928-12163213 (+) ggccattaaggccgggtggggtggcacatgcctgtaatcccagcactttgggaggccaaggctggtggatcacctgaggtcaggagttcgagaccagcctggccaacacggtgaaaccccgcctctactaaaaatacaaaaaatagccgggtgtggtggtgggcacctgtgatcccagcttcctgggaggctgaggcaagagaatcgcttgaatctgggaggcggaggttgcagtgagccaggatcacaccattgctgtccagcctgggtgacagagcaagactgc >DW425339:1-286 (+) ggccattaaggccgggtggggtggcacatgcctgtggtcccagcgctttgggaggccggggctggtggatcacctggggtcgggagttcgagaccggcctggccggcacggtggagccccgcctctgctgaaaatacagaagatggccgggtgtggtggtgggcgcctgtgatcccagcttcctgggaggctgaggcgggagaatcgcttgagtctgggaggcggaggttgcagtgggccgggatcgcgccattgctgtccagcctgggtgacagagcgagactgc End editing Edited EST: DW427745, type: ag Aligns to: chr10:104777458-104777719 (++) All mismatches: ag (20), ag (26), ag (27), ag (43), ag (49), ag (72), ag (80), ag (81), ag (87), ag (105), ag (106), ag (117), ag (120), ag (126), ag (133), ag (141), ag (146), ag (153), ag (159), ag (160), ag (165), ag (169), ag (186), ag (192), ag (195), ag (200), ag (229), ag (250), ga (256), Editing mismatches: 28, all mismatches: 29, alignment length: 262, cluster length: 231, total number of As: 59 Locations in RNA: 20 26 27 43 49 72 80 81 87 105 106 117 120 126 133 141 146 153 159 160 165 169 186 192 195 200 229 250 Locations in genome: 104777461 104777467 104777468 104777484 104777490 104777513 104777521 104777522 104777528 104777546 104777547 104777558 104777561 104777567 104777574 104777582 104777587 104777594 104777600 104777601 104777606 104777610 104777627 104777633 104777636 104777641 104777670 104777691 Upstream nucleotide (in genome): c t a g g c c a a a a t t t t c t c t a c t c a c g c c Upstream nucleotide summary: a: 7, c: 10, g: 3, t: 8, other: 0 Downstream nucleotide (in genome): c a t g g g a g c a c c a c g t g c a t g c g t c g a g Downstream nucleotide summary: a: 6, c: 8, g: 10, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 3, ca: 2, cc: 3, cg: 4, ct: 1, ga: 0, gc: 0, gg: 3, gt: 0, ta: 3, tc: 3, tg: 2, tt: 0, other: 0 >chr10:104777458-104777719 (+) cacacctgtaatcccagcactttgggaggctgaggcaggtggatcacctgaggtcaggaattcaagaccaacctggccaatgtggtgaaaccctgtctctactaaacatacagattagctgggcatggtagtgggcacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgagcctgggaggtggaggttgcagtgaaccaagttagcaccattgctctccagcctgggggacagagcaagaatctgtct >DW427745:17-278 (+) cacgcctgtggtcccagcactttggggggctggggcaggtggatcacctgaggtcgggaattcgggaccagcctggccaatgtggtgaggccctgtctctgctgaacatgcagattggctgggcgtggtggtgggcgcctgtggtcccggctgctcgggaggctgaggcgggagagtcgcttgggcctgggaggtggaggttgcagtgaaccgagttagcaccattgctctccggcctgagggacagagcaagaatctgtct End editing Edited EST: DW434695, type: ag Aligns to: chr10:76420042-76420285 (++) All mismatches: ag (16), ag (47), ag (69), ag (102), ag (103), ag (116), ag (125), ag (126), ag (127), ag (138), ag (197), ag (205), ag (213), ag (220), ag (249), Editing mismatches: 15, all mismatches: 15, alignment length: 243, cluster length: 235, total number of As: 57 Locations in RNA: 16 47 69 102 103 116 125 126 127 138 197 205 213 220 249 Locations in genome: 76420042 76420073 76420095 76420128 76420129 76420142 76420151 76420152 76420153 76420164 76420224 76420232 76420240 76420247 76420276 Upstream nucleotide (in genome): n t t c a c a a a t c c t a t Upstream nucleotide summary: a: 5, c: 4, g: 0, t: 5, other: 1 Downstream nucleotide (in genome): c g c a t g a a t c g t a c c Downstream nucleotide summary: a: 4, c: 5, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 2, ca: 1, cc: 0, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 3, tg: 1, tt: 0, other: 1 >chr10:76420042-76420285 (+) acacctggctagtttttttgtatttttttgtagagatggagtttcgccatgctacccaggctggtctcgaacttattagctgaaacaatctgcccatctcagcctcccaaaatgctggggttacagacacgagccaccgtgtctagcctcctattttaaatatgagaaaattggcctggcacagtggctcatgcctgtaatcccaacactttgggaggccaagttgggaggattacttgagcct >DW434695:16-258 (+) gcacctggctagtttttttgtatttttttgtggagatggagtttcgccatgctgcccaggctggtctcgaacttattagctgaaacggtctgcccatctcggcctcccagggtgctggggttgcagacacgagccaccgtgtctagcctcctattttaaatatgagaaaattggcctg-cacggtggctcgtgcctgtgatcccagcactttgggaggccaagttgggaggattgcttgagcct End editing Edited EST: DW436660, type: ag Aligns to: chr10:88892225-88892459 (++) All mismatches: ag (46), ag (62), ag (66), ag (68), ag (69), ag (74), tc (90), ag (91), ag (104), ag (114), ag (125), ag (128), ag (132), ag (140), ag (147), ag (153), ag (166), ag (172), ag (173), ag (212), ga (226), ag (232), ag (237), ag (243), ag (248), Editing mismatches: 23, all mismatches: 25, alignment length: 235, cluster length: 203, total number of As: 53 Locations in RNA: 46 62 66 68 69 74 91 104 114 125 128 132 140 147 153 166 172 173 212 232 237 243 248 Locations in genome: 88892254 88892270 88892274 88892276 88892277 88892282 88892299 88892312 88892322 88892333 88892336 88892340 88892348 88892355 88892361 88892374 88892380 88892381 88892420 88892440 88892445 88892451 88892456 Upstream nucleotide (in genome): c c t t a c t c c g c c c a c a a a t g t g c Upstream nucleotide summary: a: 5, c: 10, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): g t t a t g g c g c g g t a t t a t c g g g g Downstream nucleotide summary: a: 3, c: 3, g: 10, t: 7, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 3, ca: 0, cc: 1, cg: 6, ct: 3, ga: 0, gc: 1, gg: 2, gt: 0, ta: 1, tc: 1, tg: 2, tt: 1, other: 0 >chr10:88892225-88892459 (+) gttattaatattaaagattatattttgccaggtgcagtggctcacatctataatcccagcactttgggaggcttaggtggatggatcacttgagctcaggagtttgagaccagccagggcaacatggtgaaaccccatctctacaaaaaatgaaaaattaaccaggcttggtggtgcgtgcctgtactcctagctacttgcgagtctgaggtgggaggatagcttgagcccagga >DW436660:17-251 (+) gttattaatattaaagattatattttgccgggtgcagtggctcacgtctgtggtcccggcactttgggaggctcgggtggatggatcgcttgagctcgggagtttgaggccggccggggcaacgtggtgagaccccgtctctacaaaaagtgaaaggttaaccaggcttggtggtgcgtgcctgtactcctagctgcttgcgagtctgaagtggggggatggcttgggcccggga End editing Edited EST: CB143729, type: ag Aligns to: chr10:69657776-69658166 (++) All mismatches: ag (84), ag (85), ag (86), ag (107), ag (109), ag (115), ag (116), ag (117), ag (134), ag (171), ag (172), ag (195), ag (198), ag (207), ag (212), ag (217), ag (220), ag (237), ag (252), ac (398), tc (413), Editing mismatches: 19, all mismatches: 21, alignment length: 391, cluster length: 169, total number of As: 53 Locations in RNA: 84 85 86 107 109 115 116 117 134 171 172 195 198 207 212 217 220 237 252 Locations in genome: 69657809 69657810 69657811 69657832 69657834 69657840 69657841 69657842 69657859 69657896 69657897 69657920 69657923 69657932 69657937 69657942 69657945 69657962 69657977 Upstream nucleotide (in genome): a a a a c g a a a t a a c c g c g g c Upstream nucleotide summary: a: 9, c: 5, g: 4, t: 1, other: 0 Downstream nucleotide (in genome): a a g c t a a c a a t g g c a g g g c Downstream nucleotide summary: a: 7, c: 4, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 4, ac: 2, ag: 2, at: 1, ca: 0, cc: 2, cg: 2, ct: 1, ga: 2, gc: 0, gg: 2, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr10:69657776-69658166 (+) cccagcactttgggaggccacagcgggcggtcaaaagtttgagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaattagatggatgtggtggcgcatgctgtaatcccagctactcaggaggctgaagcaggagaatcacttgaacccaggaggcggaggttgcagtgagctgagatggcaccactgcactccagcctgggcgagagagtgagactctgtctcaaaaaaaaaaaaaaagaaaagaaaaaaaaagaaaagggactatactatgttcgaagagtgtagtttctgtcccatactgaattcactgttctttccctagtgattaaaatacaagaaaaggtagagggagaaacacgaactgaattttat >CB143729:51-441 (+) cccagcactttgggaggccacagcgggcggtcaggggtttgagaccagcctgaccagcgtggtggggccctgtctctactaaagatacaaaaattagatggatgtggtggcgcatgctgtggtcccagctactcaggaggctgaggcgggagaatcgcttggacccggggggcggaggttgcagtgggctgagatggcaccgctgcactccagcctgggcgagagagtgagactctgtctcaaaaaaaaaaaaaaagaaaagaaaaaaaaagaaaagggactatactatgttcgaagagtgtagtttctgtcccatactgaattcactgttctttccctagtgattacaatacaagaaaaggcagagggagaaacacgaactgaattttat End editing Edited EST: BX489910, type: ag Aligns to: chr10:97517268-97517710 (++) All mismatches: ag (233), ag (239), ag (240), ag (280), ag (308), ag (330), ag (333), ag (348), ag (374), ag (384), ag (416), ag (427), ag (440), Editing mismatches: 13, all mismatches: 13, alignment length: 443, cluster length: 208, total number of As: 52 Locations in RNA: 233 239 240 280 308 330 333 348 374 384 416 427 440 Locations in genome: 97517500 97517506 97517507 97517547 97517575 97517597 97517600 97517615 97517641 97517651 97517683 97517694 97517707 Upstream nucleotide (in genome): c t a g c t t t t c a c g Upstream nucleotide summary: a: 2, c: 4, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): c a t g a c a g g c c g g Downstream nucleotide summary: a: 3, c: 4, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 1, ca: 1, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 2, tt: 0, other: 0 >chr10:97517268-97517710 (+) gggaagtgatactggtaaaatcttaagtctgtgaaggaatttgtactttgcactcaagttcacatacattttcctcatttggtgctcatggccattctctatgagaagcaggtattgttattatggtcttttgcaaaaaggagaaactgaggtcagaaggggttagtttggtgacaccagtcacagctagttgtcaaaagtctggactggggggctggatgtggtggctcgcacctgtaatcccagcactttgggaggccgaggtgggcggatcacctgaggtcaggagttcgagaccggcctggccaacatgatgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggtgtgcgcctgtagtcccagccacttggaaggctgaggtaggagaatcacctgaacccgggaggcagaggttgcagtgagct >BX489910:1-443 (+) gggaagtgatactggtaaaatcttaagtctgtgaaggaatttgtactttgcactcaagttcacatacattttcctcatttggtgctcatggccattctctatgagaagcaggtattgttattatggtcttttgcaaaaaggagaaactgaggtcagaaggggttagtttggtgacaccagtcacagctagttgtcaaaagtctggactggggggctggatgtggtggctcgcgcctgtggtcccagcactttgggaggccgaggtgggcggatcacctggggtcaggagttcgagaccggcctggccgacatgatgaaaccctgtctctgctgaaaatacaaaaattggctgggtgtggtggtgtgcgcctgtggtcccagccgcttggaaggctgaggtaggagaatcacctgagcccgggaggcggaggttgcagtgggct End editing Edited EST: AW023411, type: ag Aligns to: chr10:88289376-88289799 (++) All mismatches: ca (92), ag (141), ag (157), ag (158), ag (163), ag (230), ag (249), ag (251), ag (293), ag (303), ag (307), ag (324), ag (339), ag (356), Editing mismatches: 13, all mismatches: 14, alignment length: 424, cluster length: 216, total number of As: 52 Locations in RNA: 141 157 158 163 230 249 251 293 303 307 324 339 356 Locations in genome: 88289509 88289525 88289526 88289531 88289598 88289617 88289619 88289661 88289671 88289675 88289692 88289707 88289724 Upstream nucleotide (in genome): c t a c c t c t t c a t a Upstream nucleotide summary: a: 3, c: 5, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): g a t g t c a g c g g g t Downstream nucleotide summary: a: 2, c: 2, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 2, ca: 1, cc: 0, cg: 3, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr10:88289376-88289799 (+) gttattaaagttaatatcacctgtttctttttacctttatttaatgtgggtactagaaaaaattaagttacctttgtggcttgccttatatttatattggcagcactgatatcaaagctcagtagctgggcgcagtggcttatgcctgtaatcccagcactttgggagtccgaggcagggtgggtggcttgagcccatgagttcaagaccagcctgggcaacatggtgagaccctgtctctacaaaaactacaaaaattagccaggtgtgttggcacatgcctgtagtctcagctactcaggaggctgaggtgggaaggtcgcttgagcctaggagattgaggctgcaatgagccgtgattgtgccactgcattctagcccaggtgacagagcaagcccctgtctcaaaaaaaaaaaaaaaaaa >AW023411:8-431 (+) gttattaaagttaatatcacctgtttctttttacctttatttaatgtgggtactagaaaaaattaagttacctttgtggcttgcattatatttatattggcagcactgatatcaaagctcagtagctgggcgcggtggcttatgcctgtggtcccggcactttgggagtccgaggcagggtgggtggcttgagcccatgagttcaagaccagcctgggcaacgtggtgagaccctgtctctgcgaaaactacaaaaattagccaggtgtgttggcacatgcctgtggtctcagctgctcgggaggctgaggtgggagggtcgcttgagcctgggagattgaggctgcagtgagccgtgattgtgccactgcattctagcccaggtgacagagcaagcccctgtctcaaaaaaaaaaaaaaaaaa End editing Edited EST: AW238987, type: ga Aligns to: chr10:17271308-17271891 (++) All mismatches: ga (125), ga (138), ga (152), ga (160), ga (163), ga (168), ga (175), ga (177), ga (186), ga (205), ga (213), ga (221), ga (235), ga (241), ga (243), ga (246), ga (248), ga (263), ga (274), ga (279), ga (285), ga (287), ga (289), ga (292), ga (294), ga (303), ga (305), ga (313), ga (316), ga (318), ga (320), ga (326), ga (327), ga (334), ga (336), ga (340), ga (342), ga (347), ga (354), ga (357), ga (364), ga (366), ga (367), ga (375), ga (378), ga (379), ga (382), ga (385), ga (397), ga (413), ga (426), ga (429), ga (430), ga (435), ga (439), ga (440), ag (441), ga (444), ga (448), ga (452), ag (472), ga (474), ga (475), ga (477), ga (486), ga (506), ga (509), gc (513), gc (521), ag (528), ga (530), ga (531), ga (532), ga (537), gt (538), gt (547), ga (553), ga (554), ga (555), ga (566), ga (569), ga (572), ga (577), Editing mismatches: 76, all mismatches: 83, alignment length: 582, cluster length: 455, total number of Gs: 146 Locations in RNA: 125 138 152 160 163 168 175 177 186 205 213 221 235 241 243 246 248 263 274 279 285 287 289 292 294 303 305 313 316 318 320 326 327 334 336 340 342 347 354 357 364 366 367 375 378 379 382 385 397 413 426 429 430 435 439 440 444 448 452 474 475 477 486 506 509 530 531 532 537 553 554 555 566 569 572 577 Locations in genome: 17271432 17271445 17271459 17271467 17271470 17271475 17271482 17271484 17271493 17271512 17271520 17271528 17271542 17271548 17271550 17271553 17271555 17271570 17271581 17271586 17271592 17271594 17271596 17271599 17271601 17271610 17271612 17271620 17271623 17271625 17271627 17271633 17271634 17271641 17271643 17271647 17271649 17271654 17271661 17271664 17271671 17271673 17271674 17271682 17271685 17271686 17271689 17271692 17271704 17271720 17271733 17271736 17271737 17271742 17271745 17271746 17271751 17271755 17271759 17271781 17271782 17271784 17271793 17271814 17271817 17271838 17271839 17271840 17271845 17271861 17271862 17271863 17271874 17271877 17271880 17271886 Upstream nucleotide (in genome): a c a c c c c c c c c c g c c t c c c c c g c c t c c t c t c c g c t c g c t a g t g c t g c c c c a t g t a g t t c a g t t t t a g g a g g g a a a g Upstream nucleotide summary: a: 11, c: 33, g: 16, t: 16, other: 0 Downstream nucleotide (in genome): g t g g g g c a a t t c g c c c c c c t g c g t t c c c t c c g a t c g g g c g t g a c g c a c a c g g a c g a a a c g t c g c g g g c g g g a g g a g Downstream nucleotide summary: a: 12, c: 25, g: 29, t: 10, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 10, at: 0, ca: 4, cc: 14, cg: 8, ct: 7, ga: 5, gc: 3, gg: 6, gt: 2, ta: 2, tc: 8, tg: 5, tt: 1, other: 0 >chr10:17271308-17271891 (+) cagagacgcagccgcgctcccaccacccacacccaccgcgccctcgttcgcctcttctccgggagccagtccgcgccaccgccgccgcccaggccatcgccaccctccgcagccatgtccaccaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggcccgggcaccgcgagccggccgagctccagccggagctacgtgactacgtccacccgcacctacagcctgggcagcgcgctgcgccccagcaccagccgcagcctctacgcctcgtccccgggcggcgtgtatgccacgcgctcctctgccgtgcgcctgcggagcagcgtgcccggggtgcggctcctgcaggactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgcaccaacgagaaggtggagctg-caggagctgaatgaccgcttcgccaactacatcgacaaggtgcgcttcctggagcagcagaataagatcctgctggccgagctcgagcagctcaagggccaaggcaagtcgcgcctgggggacctctacgaggaggagatgcgggagct >AW238987:1-582 (+) cagagacgcagccgcgctcccaccacccacacccaccgcgccctcgttcgcctcttctccgggagccagtccgcgccaccgccgccgcccaggccatcgccaccctccgcagccatgtccaccaagtccgtgtcctcatcctcctaccgcaagatgttcagcagcccaggcaccacaagccggccaagctccagccggagctacatgactacatccacccacacctacagcctgagcagcacactacaccccagcaccanccacagcctctacacctcatccccagacagcatatatgccacacactcctctaccatacacctgcaaagcagcatacccagagtgcagctcctacaagactcgataaacttctcactaaccaacaccatcaacaccaagttcaagaacacccacaccaacgagaaagtaaagctagcaaag-ctaaataaccacttcgccaactacatcgacgaaatacgcttcctagagca-canaataagatcctactagcccagctcgaccagctcgaaaaccaaatcaagtcgctcctggaaaacctctacgaagaagaaa-gcgagagct End editing Edited EST: AA482718, type: ag Aligns to: chr10:133813521-133813855 (++) All mismatches: ag (37), ag (67), ag (68), ag (98), ag (119), ag (139), ag (158), ag (159), ag (162), ag (163), ag (206), ag (210), ag (249), ag (261), ag (274), ag (281), ag (284), ag (335), Editing mismatches: 18, all mismatches: 18, alignment length: 334, cluster length: 300, total number of As: 78 Locations in RNA: 37 67 68 98 119 139 158 159 162 163 206 210 249 261 274 281 284 335 Locations in genome: 133813549 133813579 133813580 133813610 133813631 133813651 133813671 133813672 133813675 133813676 133813719 133813723 133813762 133813774 133813787 133813794 133813797 133813848 Upstream nucleotide (in genome): a t a c c t t a a a c t g c g g c a Upstream nucleotide summary: a: 6, c: 5, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): t a t g a g a a a t g c a g g t c a Downstream nucleotide summary: a: 7, c: 2, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 0, at: 3, ca: 1, cc: 1, cg: 3, ct: 0, ga: 1, gc: 0, gg: 1, gt: 1, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr10:133813521-133813855 (+) aaaaatctagcaccttttaaagacctgaatagggccgggcgcggtggctcatgcctgtaatcccagcactttgggaggcagaggtgggcagatcatgaggtcaggagttcaagaccagcctgtccaatatagtgaaaccctgtctctactaaaaaatacaaaaattagctgtgcatggtggtgcgcgcctgtagtcccagctactcgggcggctgaggcaggagaataggagaatggcttgaacctgcgaggcagaggttgctgtgagctgagatcacgccactgcactccagcctgggtgacggagtgacactccatctcaaaaaaaaaaaaaa >AA482718:9-342 (+) aaaaatctagcaccttttaaagacctgagtagggccgggcgcggtggctcatgcctgtggtcccagcactttgggaggcagaggtgggcggatcatgaggtcaggagttcgagaccagcctgtccaatatggtgaaacc-tgtctctactggaaggtacaaaaattagctgtgcatggtggtgcgcgcctgtagtcccggctgctcgggcggctgaggcaggagaataggagaatggcttggacctgcgaggcggaggttgctgtgggctgaggtcgcgccactgcactccagcctgggtgacggagtgacactccatctcaaaaaagaaaaaaa End editing Edited EST: AA482743, type: ag Aligns to: chr10:133813521-133813855 (++) All mismatches: ag (66), ag (67), ag (97), ag (118), ag (138), ag (157), ag (158), ag (161), ag (162), ag (205), ag (209), ag (248), ag (260), ag (273), ag (280), ag (283), Editing mismatches: 16, all mismatches: 16, alignment length: 334, cluster length: 219, total number of As: 60 Locations in RNA: 66 67 97 118 138 157 158 161 162 205 209 248 260 273 280 283 Locations in genome: 133813579 133813580 133813610 133813631 133813651 133813671 133813672 133813675 133813676 133813719 133813723 133813762 133813774 133813787 133813794 133813797 Upstream nucleotide (in genome): t a c c t t a a a c t g c g g c Upstream nucleotide summary: a: 4, c: 5, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): a t g a g a a a t g c a g g t c Downstream nucleotide summary: a: 6, c: 2, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 2, ca: 1, cc: 1, cg: 3, ct: 0, ga: 1, gc: 0, gg: 1, gt: 1, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr10:133813521-133813855 (+) aaaaatctagcaccttttaaagacctgaatagggccgggcgcggtggctcatgcctgtaatcccagcactttgggaggcagaggtgggcagatcatgaggtcaggagttcaagaccagcctgtccaatatagtgaaaccctgtctctactaaaaaatacaaaaattagctgtgcatggtggtgcgcgcctgtagtcccagctactcgggcggctgaggcaggagaataggagaatggcttgaacctgcgaggcagaggttgctgtgagctgagatcacgccactgcactccagcctgggtgacggagtgacactccatctcaaaaaaaaaaaaaa >AA482743:8-341 (+) aaaaatctagcaccttttaaagacctgaatagggccgggcgcggtggctcatgcctgtggtcccagcactttgggaggcagaggtgggcggatcatgaggtcaggagttcgagaccagcctgtccaatatggtgaaacc-tgtctctactggaaggtacaaaaattagctgtgcatggtggtgcgcgcctgtagtcccggctgctcgggcggctgaggcaggagaataggagaatggcttggacctgcgaggcggaggttgctgtgggctgaggtcgcgccactgcactccagcctgggtgacggagtgacactccatctcaaaaaaaaaaaaaa End editing Edited EST: AL713106, type: ag Aligns to: chr10:18627540-18628041 (++) All mismatches: ag (197), ag (199), ag (255), ag (259), ag (269), ag (291), ag (295), ag (296), ag (302), ag (340), ag (351), ag (366), ag (367), ag (378), Editing mismatches: 14, all mismatches: 14, alignment length: 503, cluster length: 182, total number of As: 41 Locations in RNA: 197 199 255 259 269 291 295 296 302 340 351 366 367 378 Locations in genome: 18627735 18627737 18627793 18627797 18627807 18627829 18627833 18627834 18627840 18627878 18627889 18627904 18627905 18627916 Upstream nucleotide (in genome): c t c t c t t a t c c a a c Upstream nucleotide summary: a: 3, c: 6, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): t g a g c g a t a g a a t c Downstream nucleotide summary: a: 5, c: 2, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 2, ca: 2, cc: 2, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 3, tt: 0, other: 0 >chr10:18627540-18628041 (+) gttttttctttccttctttcccttccttccttctttctttctctctctttttctttttttctctctccttccttccttccttccttccttcctgacttcctgccttcctgccttctttccttctttcc-ttttttttttttttttttttgaaagagggtcttggctccacccaggctgcagtgcagtggtatgatcatagctcattgcagcctctacctctcaggttcaaatgatcctcccaactcagcctcccaagtagctgggaccacaggcacatgccaccatgcctagctaatttttaaatttttttgcagagacggggtcttcctttgttgcccaggctggtttcaaactcctgggctcaaatgatcctcccacctcggcttcccaaagtgctggaattataggcgtgagctaccatgcccagcctgtttcccgttttttactacagcccctcggtgtagctagggacatttcattcatgcacctccctgtgtactca >AL713106:1-503 (+) gttttttctttccttctttcccttccttccttctttctttctctctctttttctttttttctctctccttccttccttccttccttccttcctgacttcctgccttcctgccttctttccttctttcctttttttttttttttttttttgaaagagggtcttggctccacccaggctgcagtgcagtggtatgatcgtggctcattgcagcctctacctctcaggttcaaatgatcctcccaactcagcctcccgagtggctgggaccgcaggcacatgccaccatgcctggctggtttttgaatttttttgcagagacggggtcttcctttgttgcccgggctggtttcgaactcctgggctcaggtgatcctcccgcctcggcttcccaaagtgctggaattataggcgtgagctaccatgcccagcctgtttcccgttttttactacagcccctcggtgtagctagggacatttcattcatgcacctccctgtgtactca End editing Edited EST: DA058535, type: ag Aligns to: chr11:72563246-72563786 (++) All mismatches: ag (183), ag (243), ag (248), ag (304), ag (305), ag (306), ag (310), ag (314), ag (341), ag (343), ag (344), ag (349), ag (357), ag (360), ag (366), ag (376), ag (385), ag (397), ag (405), ag (413), ag (414), ag (434), Editing mismatches: 22, all mismatches: 22, alignment length: 541, cluster length: 252, total number of As: 74 Locations in RNA: 183 243 248 304 305 306 310 314 341 343 344 349 357 360 366 376 385 397 405 413 414 434 Locations in genome: 72563428 72563488 72563493 72563549 72563550 72563551 72563555 72563559 72563586 72563588 72563589 72563594 72563602 72563605 72563611 72563621 72563630 72563642 72563650 72563658 72563659 72563679 Upstream nucleotide (in genome): a a c t a a t a t t a c c g g a a g c c a c Upstream nucleotide summary: a: 9, c: 6, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): g t g a a a c a t a t g g g g t c a g a g g Downstream nucleotide summary: a: 7, c: 2, g: 9, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 2, at: 3, ca: 1, cc: 0, cg: 5, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 0, tt: 1, other: 0 >chr11:72563246-72563786 (+) tatttaaaaagtcaaaaaataacagatgctggtgacgttatggaaaaaagggacgcttatacactgctggtgggagtataaattagttcagccactgtggaaagcagtgtggcaattcctcaaagagctaaaaacaggactaccattcaacccagcaatcccattactggacacatacccaaaggtacataaatcattctactataaagacacatgggcaggagtggtggctcatgcctgtaatcccagcactttggaaggctaaagtgggtggtgccaaaatggcgaaaccttgtctctactaaaaatacaaaaattagccaggcgtggtggtatgcctataatcccagctattcaggaggctgaggcacgagaattgcttgaacctgggaggtgaaggttgcagtgagtcaagattgtgccagtgcattgcagcctgggcaacagagcaagattgtcttaaaaaaaaaaaagacacatgcacacatgcacgtgtatattcattgcagcactatttatactagcgaagacatgaaatcaa >DA058535:1-541 (+) tatttaaaaagtcaaaaaataacagatgctggtgacgttatggaaaaaagggacgcttatacactgctggtgggagtataaattagttcagccactgtggaaagcagtgtggcaattcctcaaagagctaaaaacaggactaccattcaacccagcaatcccattactggacacatacccaagggtacataaatcattctactataaagacacatgggcaggagtggtggctcatgcctgtagtcccggcactttggaaggctaaagtgggtggtgccaaaatggcgaaaccttgtctctactgggaatgcaagaattagccaggcgtggtggtatgcctgtggtcccggctattcggggggctggggcacgagagttgcttgagcctgggaggtggaggttgcggtgagtcgggattgtgccagtgcattgcggcctgggcaacagagcaagattgtcttaaaaaaaaaaaagacacatgcacacatgcacgtgtatattcattgcagcactatttatactagcgaagacatgaaatcaa End editing Edited EST: DA221841, type: ag Aligns to: chr11:65608125-65608668 (++) All mismatches: ag (1), ag (30), ag (36), ag (40), ag (44), ag (53), ag (54), ag (63), ag (71), ag (84), ag (85), ag (93), ag (96), ag (101), ag (114), ag (138), ag (318), ag (324), ag (337), ag (349), ag (350), ag (358), ag (393), ag (410), ag (422), ag (432), ag (435), ag (450), ag (459), ag (467), ag (473), ag (476), ag (493), ag (516), ag (528), ag (537), Editing mismatches: 36, all mismatches: 36, alignment length: 545, cluster length: 536, total number of As: 144 Locations in RNA: 1 30 36 40 44 53 54 63 71 84 85 93 96 101 114 138 318 324 337 349 350 358 393 410 422 432 435 450 459 467 473 476 493 516 528 537 Locations in genome: 65608125 65608154 65608160 65608164 65608168 65608177 65608178 65608187 65608195 65608208 65608209 65608217 65608220 65608225 65608238 65608262 65608441 65608447 65608460 65608472 65608473 65608481 65608516 65608533 65608545 65608555 65608558 65608573 65608582 65608590 65608596 65608599 65608616 65608639 65608651 65608660 Upstream nucleotide (in genome): n t c t c g a g g c a c g a c c g c c c a g a c t t a c a t t c c a c c Upstream nucleotide summary: a: 8, c: 15, g: 6, t: 6, other: 1 Downstream nucleotide (in genome): t g g c g a g t g a g t g g c a g c g a t t g g g c g c t t g g t c g c Downstream nucleotide summary: a: 4, c: 7, g: 17, t: 8, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 5, at: 2, ca: 3, cc: 4, cg: 6, ct: 2, ga: 1, gc: 0, gg: 3, gt: 2, ta: 0, tc: 2, tg: 3, tt: 1, other: 1 >chr11:65608125-65608668 (+) attagccaggcatggtggcagatgcctgtagtcccagctactcaggaggctgaagtgggaggatcccttgagcctgggagttcaaggctgccatgagccaagatggcactaccacactccatcctggatgacagagcaagaccctgtctc-aaaaaaaaaaaaagaatctacaaacgattaaattaataagtgagttcagcaagatattttaaaaaattattaaaattaacaagtaaatttgtggggaccaaggtaaatatataaaaatctattatggtttttttttctttctttctttcttttttttctgagatggagtttcactcttgtcacccaggctggagtgcaatggtgcgatcttgtttcaccgccacctctgcctccgggttcaagggattttcctgcctcagcctcctgagtagctgggattacaagcgccccccaccacacctggctaatttttgtatttttagcagagacggggttttaccatgttgaccagcctggtcctcgaactcctgagctcaggtgatccacccgcctc >DA221841:1-545 (+) gttagccaggcatggtggcagatgcctgtggtcccggctgctcgggaggctggggtgggagggtcccttgggcctgggagttcggggctgccgtgggccaggatggcactaccgcactccatcctggatgacagagcgagaccctgtctcaaaaaaaaaaaaaagaatctacaaacgattaaattaataagtgagttcagcaagatattttaaaaaattattaaaattaacaagtaaatttgtggggaccaaggtaaatatataaaaatctattatggtttttttttctttctttctttcttttttttctgagatggggtttcgctcttgtcacccgggctggagtgcggtggtgcggtcttgtttcaccgccacctctgcctccgggttcaggggattttcctgcctcggcctcctgagtggctgggattgcaggcgccccccaccacgcctggctagtttttgtgtttttggcggagacggggttttaccgtgttgaccagcctggtcctcgagctcctgagctcgggtgatccgcccgcctc End editing Edited EST: DA333704, type: ag Aligns to: chr11:63752500-63753055 (++) All mismatches: ag (202), ag (234), ag (242), ag (264), ag (267), ag (271), ag (274), ag (298), ag (300), ag (310), ag (341), ag (342), ag (346), ga (515), Editing mismatches: 13, all mismatches: 14, alignment length: 556, cluster length: 145, total number of As: 41 Locations in RNA: 202 234 242 264 267 271 274 298 300 310 341 342 346 Locations in genome: 63752669 63752701 63752709 63752731 63752734 63752738 63752741 63752765 63752767 63752777 63752808 63752809 63752813 Upstream nucleotide (in genome): c a g t a a t t t t g a c Upstream nucleotide summary: a: 4, c: 2, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): c c a c a t g t g c a c g Downstream nucleotide summary: a: 3, c: 5, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 1, ca: 0, cc: 1, cg: 1, ct: 0, ga: 2, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 2, tt: 1, other: 0 >chr11:63752500-63753055 (+) ctgcactccagcctggatggtcagagagaaactctgtctcaaaaaaaaaaaaaatgttaaacgtaatttttagataattcacagggaacttaaagaagttataaagaggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacgaggtcaggagattgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgtggtggcgggcgcctatagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccaggaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaaaaaagaaattataaagattccatgtatcctttactcagtctcccctgcccccactaacatcttgcaaaaatgttgtgaagcatacaccaggatactgacagagtcagggtattgcgcatttccaccttcacaagaatccagactttccct >DA333704:33-588 (+) ctgcactccagcctggatggtcagagagaaactctgtctnaaaaaaaaaaaaaatgttaaacgtaatttttagataattcacagggaacttaaagaagttataaagaggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcgcgaggtcaggagattgagaccatcctggctagcacggtggaaccccgtctctactaaaaatgcagaaagttggccgggcgtggtggcgggcgcctgtggtcccagctgctcgggaggctgaggcaggagaatggcgtgggcccgggaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaaaaaaaaagaaattataaagattccatgtatcctttactcagtctcccctgcccccactaacatcttgcaaaaatgttgtaaagcatacaccaggatactgacagagtcagggtattgcgcatttccaccttcacaagaatccagactttccct End editing Edited EST: DA225940, type: ag Aligns to: chr11:43884537-43884844 (++) All mismatches: ag (92), ag (94), ag (110), ag (111), ag (116), ag (125), ag (127), ag (141), ag (211), ag (246), ag (252), ag (258), ag (270), ag (271), ag (278), ag (289), ag (294), ag (297), Editing mismatches: 18, all mismatches: 18, alignment length: 308, cluster length: 206, total number of As: 58 Locations in RNA: 92 94 110 111 116 125 127 141 211 246 252 258 270 271 278 289 294 297 Locations in genome: 43884628 43884630 43884646 43884647 43884652 43884661 43884663 43884677 43884747 43884782 43884788 43884794 43884806 43884807 43884814 43884825 43884830 43884833 Upstream nucleotide (in genome): c c t a c g g a a t c t t a g g c g Upstream nucleotide summary: a: 4, c: 5, g: 5, t: 4, other: 0 Downstream nucleotide (in genome): c g a t g g g g t t t c a g g g g g Downstream nucleotide summary: a: 2, c: 2, g: 10, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 2, ca: 0, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 5, gt: 0, ta: 2, tc: 1, tg: 0, tt: 1, other: 0 >chr11:43884537-43884844 (+) atttttcacaccttttctgctgttaaaaccattcactataattttaatttaaaatgtttttcattttaaaaagttctatttggggccaggcacagtggctcatgcctgtaatcccagctctttgagaggccaaggtgggaagattccttgaggcgaggtgttcaagaccagcctgggcaacaaagtaagacccccccatctcttcaaaaaatttaaaaattgaccagacatggtggcgctcacctatagtcatagctacttgggaggctaaggcaggaggatcccttgagcccaggaggttgaggctg >DA225940:1-308 (+) atttttcacaccttttctgctgttaaaaccattcactataattttaatttaaaatgtttttcattttaaaaagttctatttggggccaggcgcggtggctcatgcctgtggtcccggctctttggggggccaaggtgggaggattccttgaggcgaggtgttcaagaccagcctgggcaacaaagtaagacccccccatctcttcaaaaagtttaaaaattgaccagacatggtggcgctcacctgtagtcgtagctgcttgggaggctggggcagggggatcccttgggcccggggggttgaggctg End editing Edited EST: DA637668, type: ag Aligns to: chr11:66127554-66127859 (++) All mismatches: ag (39), ag (63), ag (64), ag (74), ag (139), ag (185), ag (192), ag (222), ag (223), ag (224), ag (236), ag (237), ag (263), Editing mismatches: 13, all mismatches: 13, alignment length: 306, cluster length: 225, total number of As: 39 Locations in RNA: 39 63 64 74 139 185 192 222 223 224 236 237 263 Locations in genome: 66127591 66127615 66127616 66127626 66127691 66127737 66127744 66127774 66127775 66127776 66127788 66127789 66127815 Upstream nucleotide (in genome): c c a g t t c c a a c a a Upstream nucleotide summary: a: 5, c: 5, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): c a t c c t g a a c a g g Downstream nucleotide summary: a: 4, c: 4, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 1, ca: 3, cc: 1, cg: 1, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 1, other: 0 >chr11:66127554-66127859 (+) ttttttttttttttttttgagatgatcttgctctgtcacccaggctggagtgcagtggcgcaatctcggctgactgcagcctccaccttccgggttccagtgattctcctgcctcagcctcccaggtagctgggattacaggcgcctgccaccattcccggctgatttctgtatttttttagtatagaccaggtttcaccatgttggccaggctggtctcaaactcctgacctcaagtgatccgcccaccttggcctctcaaggtgctgggattacaggtgtgagccaccatgcctggcctcacgt >DA637668:2-307 (+) ttttttttttttttttttgagatgatcttgctctgtcgcccaggctggagtgcagtggcgcggtctcggctggctgcagcctccaccttccgggttccagtgattctcctgcctcagcctcccaggtagctgggattgcaggcgcctgccaccattcccggctgatttctgtatttttttagtgtanaccgggtttcaccatgttggccaggctggtctcgggctcctgacctcgggtgatccgcccaccttggcctctcagggtgctgggattacaggtgtgagccaccatgcctggcctcacgt End editing Edited EST: DA861088, type: ag Aligns to: chr11:43884524-43885112 (++) All mismatches: ag (101), ag (107), ag (123), ag (129), ag (145), ag (154), ag (164), ag (170), ag (178), ag (179), ag (194), ag (201), ag (222), ag (225), ag (260), ag (262), ag (266), ag (284), ag (285), ag (289), ag (303), ag (308), ag (328), ag (340), ag (343), ag (362), tc (538), Editing mismatches: 26, all mismatches: 27, alignment length: 592, cluster length: 261, total number of As: 69 Locations in RNA: 101 107 123 129 145 154 164 170 178 179 194 201 222 225 260 262 266 284 285 289 303 308 328 340 343 362 Locations in genome: 43884624 43884630 43884646 43884652 43884668 43884677 43884687 43884692 43884700 43884701 43884716 43884723 43884744 43884747 43884782 43884784 43884788 43884806 43884807 43884811 43884825 43884830 43884850 43884862 43884865 43884884 Upstream nucleotide (in genome): c c t c c a g g c a a t a a t t c t a c g c g c c c Upstream nucleotide summary: a: 6, c: 11, g: 4, t: 5, other: 0 Downstream nucleotide (in genome): g g a g a g g g a g c a a t t g t a g g g g g c c a Downstream nucleotide summary: a: 7, c: 3, g: 13, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 3, at: 1, ca: 3, cc: 2, cg: 5, ct: 1, ga: 0, gc: 0, gg: 4, gt: 0, ta: 3, tc: 0, tg: 1, tt: 1, other: 0 >chr11:43884524-43885112 (+) ttgcatttctataatttttcacaccttttctgctgttaaaaccattcactataattttaatttaaaatgtttttcattttaaaaagttctatttggggccaggcacagtggctcatgcctgtaatcccagctctttgagaggccaaggtgggaagattccttgagg-cgaggtgttcaagaccagcctgggcaacaaagtaagacccccccatctcttcaaaaaatttaaaaattgaccagacatggtggcgctcacctatagtcatagctacttgggaggctaaggcaggaggatcccttgagcccaggaggttgaggctgcagtgagctatgatcgcaccactgcactccagcctgggcaacagagcaagaccctgtcttttgggagcccgggggaaagaatctgtttggctctcatttaaacctgcctggtcagtcctaatagttttttattacttgctcatttttaaaattcagtgctaaaagtttacgtaactgtgtactacatt-ggtattttatggtccatatctgataataccaatatcttaaattcttaggagtctaaacccattgtttgtatttct-ggtgg >DA861088:1-592 (+) ttgcatttctataatttttcacaccttttctgctgttaaaaccattcactataattttaatttaaaatgtttttcattttaaaaagttctatttggggccgggcacggtggctcatgcctgtgatcccggctctttgagaggccgaggtgggaggattccttggggccggggtgttcgggaccagcctgggcagcaaagtgagacccccccatctcttcaagaagtttaaaaattgaccagacatggtggcgctcacctgtggtcgtagctacttgggaggctggggcgggaggatcccttgggcccgggaggttgaggctgcagtgggctatgatcgcgccgctgcactccagcctgggcgacagagcaagaccctgtcttttgggagcccgggggaaagaatctgtttggctctcatttaaacctgcctggtcagtcctaatagttttttattacttgctcatttttaaaattcagtgctaaaagtttacgtaactgtgtactacatttggtattttatggtccatatctgataacaccaatatcttaaattcttaggagtctaaacccattgtttgtatttcttggtgg End editing Edited EST: DW419173, type: ag Aligns to: chr11:65206745-65207135 (++) All mismatches: ag (153), ag (162), ag (170), ag (179), ag (189), ag (208), ag (242), ag (247), ag (253), ag (273), ag (275), ag (276), ag (277), ag (308), ag (311), ag (314), ag (322), ag (331), ag (335), ag (350), tc (367), ag (381), ga (392), ag (399), Editing mismatches: 22, all mismatches: 24, alignment length: 391, cluster length: 247, total number of As: 68 Locations in RNA: 153 162 170 179 189 208 242 247 253 273 275 276 277 308 311 314 322 331 335 350 381 399 Locations in genome: 65206881 65206890 65206898 65206907 65206917 65206936 65206970 65206975 65206981 65207001 65207003 65207004 65207005 65207036 65207039 65207042 65207050 65207059 65207063 65207078 65207109 65207127 Upstream nucleotide (in genome): a c t c g t c t a t c a a t t c c g c a g g Upstream nucleotide summary: a: 5, c: 7, g: 4, t: 6, other: 0 Downstream nucleotide (in genome): g c a c c t g g a c a a a a c g g g c c t a Downstream nucleotide summary: a: 7, c: 7, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 0, ca: 1, cc: 3, cg: 3, ct: 0, ga: 1, gc: 1, gg: 1, gt: 1, ta: 2, tc: 2, tg: 1, tt: 1, other: 0 >chr11:65206745-65207135 (+) ggattctagacccttatcagatacatggtttgcaaatattttctcccattctgtgggttgtgttttcactttatcgataatgtccttagacatataataaatttgtattttaaaagtgacttgatttggctgtgcaaggtggctcacgcttgtaatcccagcactttgggagactgaggtgggtggatcatatgaggaggctaggagttcgaggtcagcctggccagcatagcgaaaacttgtctctactaaaaatacaaaaattagtcaggcatggtggtgcacgtctgtaataccagcttctcaggaggctgaggcacgaggatcacttgaacccaggaggaggaggttgcagtgagctgagatcatgccagggcaacagaatgagact >DW419173:17-407 (+) ggattctagacccttatcagatacatggtttgcaaatattttctcccattctgtgggttgtgttttcactttatcgataatgtccttagacatataataaatttgtattttaaaagtgacttgatttggctgtgcagggtggctcgcgcttgtgatcccagcgctttgggaggctgaggtgggtggatcatgtgaggaggctaggagttcgaggtcagcctggccggcatggcgaagacttgtctctactaaaaatgcgggaattagtcaggcatggtggtgcacgtctgtgatgccggcttctcgggaggctggggcgcgaggatcacttgagcccaggaggaggaggtcgcagtgagctgaggtcatgccaggacaacaggatgagact End editing Edited EST: DW431779, type: ag Aligns to: chr11:65208049-65208304 (++) All mismatches: ag (14), ag (82), ag (92), ag (96), ag (116), ag (120), ag (122), ag (133), ag (137), ag (159), ag (165), ag (169), ag (203), ag (217), ag (243), ag (265), Editing mismatches: 16, all mismatches: 16, alignment length: 256, cluster length: 252, total number of As: 72 Locations in RNA: 14 82 92 96 116 120 122 133 137 159 165 169 203 217 243 265 Locations in genome: 65208050 65208118 65208128 65208132 65208152 65208156 65208158 65208169 65208173 65208195 65208201 65208205 65208239 65208253 65208279 65208301 Upstream nucleotide (in genome): c c a t t a t t c t c t c t c c Upstream nucleotide summary: a: 2, c: 7, g: 0, t: 7, other: 0 Downstream nucleotide (in genome): g g c g a t c g g g g c g c c a Downstream nucleotide summary: a: 2, c: 5, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 1, ca: 1, cc: 1, cg: 5, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 3, tg: 3, tt: 0, other: 0 >chr11:65208049-65208304 (+) caggacttgtaaagcaaataagattgggaggccaaggtgggtggatcacgaggtcaggagttcgagaccagcctggccaacatagtgaaaccccgtctttactaaaaatacaaaaaaattagccaggtgtggtggtgggtgcctgtagtcccagctacttgggaggctgaggcaggagaatctcgaacccaggaggcggaggttacagtcagctgagaccgcaccattgcactccagcctgggtgacagagcaaga >DW431779:13-268 (+) cgggacttgtaaagcaaataagattgggaggccaaggtgggtggatcacgaggtcaggagttcgagaccggcctggccagcatggtgaaaccccgtctttactgaaagtgcaaaaaaattggccgggtgtggtggtgggtgcctgtggtcccggctgcttgggaggctgaggcaggagaatctcgaacccgggaggcggaggttgcagtcagctgagaccgcaccattgcgctccagcctgggtgacagagcgaga End editing Edited EST: BF112275, type: ga Aligns to: chr11:65293594-65293801 (++) All mismatches: ga (297), ga (303), ga (339), ga (342), ga (348), ga (355), ga (363), ga (376), ga (384), ga (398), ga (404), ga (405), ga (411), ga (427), ga (433), ga (441), ga (447), ga (449), ga (456), ga (464), ga (465), ga (470), ga (471), ga (474), ga (483), ga (484), Editing mismatches: 26, all mismatches: 26, alignment length: 208, cluster length: 188, total number of Gs: 64 Locations in RNA: 297 303 339 342 348 355 363 376 384 398 404 405 411 427 433 441 447 449 456 464 465 470 471 474 483 484 Locations in genome: 65293613 65293619 65293655 65293658 65293664 65293671 65293679 65293692 65293700 65293714 65293720 65293721 65293727 65293743 65293749 65293757 65293763 65293765 65293772 65293780 65293781 65293786 65293787 65293790 65293799 65293800 Upstream nucleotide (in genome): g c c c c c c g g c a g c c g c t a t c g t g t t g Upstream nucleotide summary: a: 2, c: 11, g: 8, t: 5, other: 0 Downstream nucleotide (in genome): t a c t t a a g a g g g g c g a a c a g a g c a g c Downstream nucleotide summary: a: 9, c: 5, g: 9, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 4, cc: 2, cg: 3, ct: 2, ga: 2, gc: 2, gg: 3, gt: 1, ta: 3, tc: 0, tg: 2, tt: 0, other: 0 >chr11:65293594-65293801 (+) gaaagccctcagcttcctggtcaacgactgcagcctcatccacaacaatgtctgcatggccgccgtgttcgtggaccgagctggcgagtggaagcttgggggcctggactacatgtattcggcccagggcaacggtgggggacctccccgcaaggggatccccgagcttgagcagtatgaccccccggagttggctgacagcagtggc >BF112275:278-485 (+) gaaagccctcagcttcctgatcaacaactgcagcctcatccacaacaatgtctgcatggccaccatgttcatggaccaagctggcaagtggaagcttgagggcctgaactacatgtattcagcccaaagcaacagtgggggacctccccacaaggagatccccaancttaaacagtataaccccccaaanttaactaacagcagtaac End editing Edited EST: AW276962, type: ga Aligns to: chr11:57381827-57382237 (++) All mismatches: ga (114), ga (130), ga (147), ga (152), ga (171), tc (175), ga (178), ga (179), ga (209), ga (214), ga (222), ga (229), ga (230), ga (235), ga (237), ga (242), ga (245), ga (251), ga (257), ga (258), ga (260), gc (262), ga (264), ga (292), ga (300), ga (303), ga (306), ga (310), ga (314), ga (320), ga (321), ga (327), ga (337), ga (343), ga (346), ga (350), ga (364), ga (365), ga (366), ga (373), ga (375), ga (377), ga (381), ga (382), ga (383), ac (385), ga (387), ga (388), gt (389), ga (394), ga (404), ga (416), ga (417), Editing mismatches: 49, all mismatches: 53, alignment length: 411, cluster length: 304, total number of Gs: 81 Locations in RNA: 114 130 147 152 171 178 179 209 214 222 229 230 235 237 242 245 251 257 258 260 264 292 300 303 306 310 314 320 321 327 337 343 346 350 364 365 366 373 375 377 381 382 383 387 388 394 404 416 417 Locations in genome: 57381932 57381948 57381965 57381970 57381989 57381996 57381997 57382027 57382032 57382040 57382047 57382048 57382053 57382055 57382060 57382063 57382069 57382075 57382076 57382078 57382082 57382110 57382118 57382121 57382124 57382128 57382132 57382138 57382139 57382145 57382155 57382161 57382164 57382168 57382182 57382183 57382184 57382191 57382193 57382195 57382199 57382200 57382201 57382205 57382206 57382212 57382222 57382234 57382235 Upstream nucleotide (in genome): c c t t c t g t c t a g t a t a a g g c c t t t t t t t g t t a t c a g g t a g t g g a g t a t g Upstream nucleotide summary: a: 9, c: 7, g: 12, t: 21, other: 0 Downstream nucleotide (in genome): c c a c t g g g a a g g a a c g g g c a c c c c c c g g c c c g t c g g c a g t g g c g g c c g c Downstream nucleotide summary: a: 7, c: 20, g: 19, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 7, at: 0, ca: 2, cc: 4, cg: 0, ct: 1, ga: 0, gc: 5, gg: 6, gt: 1, ta: 4, tc: 10, tg: 6, tt: 1, other: 0 >chr11:57381827-57382237 (+) aacctgtgtgggctgacagaggacccagatcttcaggtttctgcgatgcagcaccagacagtgctggaactgacagagactggggtggaggcggctgcagcctccgccatctctgtggcccgcaccctgctggtctttgaagtgcagcagcccttcctcttcgtgctctgggaccagcagcacaagttccctgtcttcatggggcgagtatatgaccccagggcctgagacctgcaggatcaggttagggcgagcgctacctctccagcctcagctctcagttgcagccctgctgctgcctgcctggacttggcccctgccacctcctgcctcaggtgtccgctatccaccaaaagggctccctgagggtctgggcaagggacctgcttctattagcccttctccatggcc >AW276962:9-419 (+) aacctgtgtgggctgacagaggacccagatcttcaggtttctgcgatgcagcaccagacagtgctggaactgacagagactggggtggaggcggctgcancctccaccatctctgtggcccacaccctgctggtctttaaantacancancccttcctcttcatgccctaagaccagcagcacaagttccctgtcttcatagggcaagtatataaccccaaagcctaaaacctacaagatcaagttanaacaaccactacctctccagcctcanctctcanttacanccctactactacctacctagacttaacccctaccacctcctacctcaagtatccactatccaccaaanaaactccctaaagatctaaaccaaatacctacttctattaacccttctccataacc End editing Edited EST: BF673569, type: ag Aligns to: chr11:19879487-19879779 (++) All mismatches: ag (34), ag (41), ag (55), ag (57), ag (61), ag (68), ag (81), ag (82), ag (96), ag (99), ag (101), ag (113), ag (121), ag (125), ag (157), ga (210), Editing mismatches: 15, all mismatches: 16, alignment length: 292, cluster length: 126, total number of As: 24 Locations in RNA: 34 41 55 57 61 68 81 82 96 99 101 113 121 125 157 Locations in genome: 19879520 19879528 19879542 19879544 19879548 19879555 19879568 19879569 19879584 19879587 19879589 19879601 19879609 19879613 19879645 Upstream nucleotide (in genome): c c t c c c t a t t g c t c c Upstream nucleotide summary: a: 1, c: 8, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g a c g c c a t g g g c g g c Downstream nucleotide summary: a: 2, c: 5, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 1, cc: 4, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 3, tt: 0, other: 0 >chr11:19879487-19879779 (+) ccacctcccgggttcatgccattctcctgcctcagcctcccaagtcgctgggactacaggcacccgccaccatgcccggctaattttttgtatttttagtagagatgggttttcaccgtgttagccaggatggtctcgatctcctgaccttgtgatccacctgccttggcctcccaaagtgctgggattaaaggcgtgagccaccacgcccggccagaacttgttcattttatgactgaaagttgatgccttt-tggctaccatctctccatttcccccatccaccagcccctg >BF673569:1-292 (+) ccacctcccgggttcatgccattctcctgcctcgg-ctcccgagtcgctgggactgcgggcgcccgccgccatgcccggctggttttttgta-ttttggtggggatgggttttcgccgtgttggccgggatggtctcgatctcctgaccttgtgatccgcctgccttggcctcccaaagtgctgggattaaaggcgtgagccaccacgcccagccagaacttgttcattttatgactgaaagttgatgcctttgtggctaccatctctccatttcccccatccaccagcccctg End editing Edited EST: CN265391, type: ag Aligns to: chr12:122035850-122036168 (++) All mismatches: ag (82), ag (96), ag (106), ag (111), ag (165), ag (170), ag (172), ag (173), ag (200), ag (202), ag (226), ag (232), ag (238), Editing mismatches: 13, all mismatches: 13, alignment length: 320, cluster length: 157, total number of As: 47 Locations in RNA: 82 96 106 111 165 170 172 173 200 202 226 232 238 Locations in genome: 122035918 122035932 122035942 122035947 122036001 122036006 122036008 122036009 122036036 122036038 122036062 122036068 122036074 Upstream nucleotide (in genome): g c g c a a a a t t a g c Upstream nucleotide summary: a: 5, c: 3, g: 3, t: 2, other: 0 Downstream nucleotide (in genome): g g g g t a a t t g g g c Downstream nucleotide summary: a: 2, c: 1, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 2, ca: 0, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 3, gt: 0, ta: 0, tc: 0, tg: 1, tt: 1, other: 0 >chr12:122035850-122036168 (+) gagactccgtctc-aaaaaaaaaaaaagatgggcacagtggctcccgcctgtaatcccagcactttgggaggccgaggtgggcagatcacccgaggtcaggagttcgagaccagcctggccaacatggtgaaaaaccctgtctctactaaaaatacaaaaattagccgggtatggtggcacacgcctatagtcccagctacttgggaggctgaagcaggagaatcacttgaacctgggaggcagagattgcagtaagccaaaatctggccactgcactccagccagggtgacagagccagactccatctcaaaaaaaaaa >CN265391:13-332 (+) gagactccgtctcaaaaaaaaaaaaaagatgggcacagtggctcccgcctgtaatcccagcactttggggggccgaggtgggcggatcacccggggtcgggagttcgagaccagcctggccaacatggtgaaaaaccctgtctctactaaaagtacagaggttagccgggtatggtggcacacgcctgtggtcccagctacttgggaggctgaggcaggggaatcgcttgaacctgggaggcagagattgcagtaagccaaaatctggccactgcactccagccagggtgacagagccagactccatctcaaaaaaaaaa End editing Edited EST: DA067896, type: ag Aligns to: chr12:116998429-116998989 (++) All mismatches: ag (171), ga (212), ag (240), ag (245), ag (262), ag (270), ag (275), ag (280), ag (285), ag (293), ag (294), ag (296), ag (299), ag (324), ag (330), ag (333), ag (334), ag (345), ag (348), ag (361), ag (374), ag (403), ag (404), ag (410), ag (424), ag (427), ag (445), ag (474), ag (475), Editing mismatches: 28, all mismatches: 29, alignment length: 562, cluster length: 304, total number of As: 88 Locations in RNA: 171 240 245 262 270 275 280 285 293 294 296 299 324 330 333 334 345 348 361 374 403 404 410 424 427 445 474 475 Locations in genome: 116998599 116998667 116998672 116998689 116998697 116998702 116998707 116998712 116998720 116998721 116998723 116998726 116998751 116998757 116998760 116998761 116998772 116998775 116998788 116998801 116998830 116998831 116998837 116998851 116998854 116998872 116998901 116998902 Upstream nucleotide (in genome): t a c a c c g c c a g c c t t a a t t t c a c a c g c a Upstream nucleotide summary: a: 8, c: 11, g: 3, t: 6, other: 0 Downstream nucleotide (in genome): g t g g g c g g a g c g t c a a t g g g a g c g g g a c Downstream nucleotide summary: a: 5, c: 5, g: 15, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 4, at: 2, ca: 3, cc: 2, cg: 5, ct: 1, ga: 0, gc: 1, gg: 2, gt: 0, ta: 1, tc: 1, tg: 4, tt: 0, other: 0 >chr12:116998429-116998989 (+) tctaatgtgctgcagcacctgtgaatgtgaccttaatggagaaaggatctttgcaggtgtaaattaattttaggatctcaagattgaatcatcctagactacctgggtggacctcaaatccaatgacaggtatccttataaaaggaaggcagatccagcttgggcaacatagggagaccctgtttctacaaatagtttaaaaaaaaaaaaagg-ctgggcatagtggcttacacctctaatcccagcaccttgggagtccaaggtgggcaggtcacttgaggccaggagttcaagaccagcttgcccaatatggcttaaccccatctctactaaaactacaaaaattagctgggcatggtagtgtatgcctgtagtccccgctacttgggaggctgagacacaagaatcacttgaatccgggaagcagaggttgcagtgagctgagattgtgccactgtactccagcttgggcaacagagcacgactccatctcagaaaaaaagctgtgggggacagtggtgtgtgcctgtggtcccagctacttgtgaggctgagacagga >DA067896:1-562 (+) tctaatgtgctgcagcacctgtgaatgtgaccttaatggagaaaggatctttgcaggtgtaaattaattttaggatctcaagattgaatcatcctagactacctgggtggacctcaaatccaatgacaggtatccttataaaaggaaggcagatccagcttgggcaacatggggagaccctgtttctacaaatagtttaaaaaaaaaaaaaaggctgggcatagtggcttacacctctagtcccggcaccttgggagtccagggtgggcgggtcgcttggggccgggagttcggggccggcttgcccaatatggcttaaccccgtctctgctggaactacaaaagttggctgggcatggtggtgtatgcctgtggtccccgctacttgggaggctgagacacgggaatcgcttgaatccgggaggcggaggttgcagtgagctgggattgtgccactgtactccagcttgggcggcagagcacgactccatctcagaaaaaaagctgtgggggacagtggtgtgtgcctgtggtcccagctacttgtgaggctgagacagga End editing Edited EST: DB160834, type: ag Aligns to: chr12:56344120-56344654 (++) All mismatches: ag (11), ag (15), ag (35), ag (36), ag (51), ag (52), ag (58), ag (76), ag (89), ag (111), ag (124), ag (147), ag (153), ag (156), ag (178), ag (182), ag (202), ag (210), ag (231), ag (232), ag (233), ag (236), ag (245), ag (309), ag (358), ag (368), ag (439), Editing mismatches: 27, all mismatches: 27, alignment length: 535, cluster length: 429, total number of As: 80 Locations in RNA: 11 15 35 36 51 52 58 76 89 111 124 147 153 156 178 182 202 210 231 232 233 236 245 309 358 368 439 Locations in genome: 56344130 56344134 56344154 56344155 56344170 56344171 56344177 56344195 56344208 56344230 56344243 56344266 56344272 56344275 56344297 56344301 56344321 56344329 56344350 56344351 56344352 56344355 56344364 56344428 56344477 56344487 56344558 Upstream nucleotide (in genome): c c c a c a c c c t c t t t t c g g c a a t t t c a t Upstream nucleotide summary: a: 5, c: 11, g: 2, t: 9, other: 0 Downstream nucleotide (in genome): c g a t a g c t g t c t g g g g c t a a g c c t g g t Downstream nucleotide summary: a: 4, c: 6, g: 10, t: 7, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 3, at: 1, ca: 3, cc: 3, cg: 4, ct: 1, ga: 0, gc: 1, gg: 0, gt: 1, ta: 0, tc: 2, tg: 3, tt: 4, other: 0 >chr12:56344120-56344654 (+) ttgctctgtcacccaggctggagtgcagtggcgcaatctcggctcactgcaagctccacctcctgggttcacgccattctcctgcctcagcctcctgagtagctgggactataggtgcccaccaccacgcctggctaattttttgtatttttagtagagacagggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtactgggattacaggtgtgagccactgatacctggccaatttttatatttgttgtagagatgaggttttgccatattgtccaggctggtctcaaactcctggtctcaagggatcacccgcctcagcctcccaaagtgctgggactacaggagtgagccactgtgcctggccttgtttgtttgttttttgagatggggtctcactatgttggccaggctggtctcgaactcctgggtttgagcaatcctcctgccatgtagctgggattatagaggctaccatgtccgtctagttttaaatt >DB160834:1-535 (+) ttgctctgtcgcccgggctggagtgcagtggcgcggtctcggctcactgcgggctccgcctcctgggttcacgccgttctcctgcctcggcctcctgagtagctgggactgtaggtgcccaccgccacgcctggctaattttttgtgtttttggtggagacagggtttcaccatgttggccgggatggtctcgatctcctggcctcgtggtccgcccgcctcggcctcccggggtgctgggattgcaggtgtgagccactgatacctggccaatttttatatttgttgtagagatgaggttttgccatgttgtccaggctggtctcaaactcctggtctcaagggatcacccgcctcggcctcccaaggtgctgggactacaggagtgagccactgtgcctggccttgtttgtttgttttttgagatggggtctcactgtgttggccaggctggtctcgaactcctgggtttgagcaatcctcctgccatgtagctgggattatagaggctaccatgtccgtctagttttaaatt End editing Edited EST: DW414313, type: ag Aligns to: chr12:64462560-64462802 (++) All mismatches: ag (41), ag (87), ag (107), ag (108), ag (115), ag (116), ag (123), ag (127), ag (130), ag (145), ag (155), ag (162), ag (187), ag (207), ag (216), ag (221), ag (245), ag (253), tg (264), ag (272), Editing mismatches: 19, all mismatches: 20, alignment length: 244, cluster length: 232, total number of As: 68 Locations in RNA: 41 87 107 108 115 116 123 127 130 145 155 162 187 207 216 221 245 253 272 Locations in genome: 64462565 64462611 64462631 64462632 64462639 64462640 64462647 64462651 64462654 64462669 64462679 64462686 64462711 64462731 64462740 64462745 64462769 64462777 64462796 Upstream nucleotide (in genome): c c a a a a c c g t t g a c g c c c a Upstream nucleotide summary: a: 6, c: 8, g: 3, t: 2, other: 0 Downstream nucleotide (in genome): g a a t a t g t t g c g c g g t a a a Downstream nucleotide summary: a: 6, c: 2, g: 6, t: 5, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 0, at: 2, ca: 3, cc: 0, cg: 3, ct: 2, ga: 0, gc: 0, gg: 2, gt: 1, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr12:64462560-64462802 (+) cgggcagatctcttgaggtcaggagttcgagatcagcctggccagcatggcaaaacgccgtctctactaaaaatataaaaattagccaggcatgatggcgcatgcctgtagtcccagttactcaggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcagtgagccgagatcatgccactgcactccagcctgggcaacagtgcaagactctgtctcaaaaaaaaa-aaaa >DW414313:36-279 (+) cgggcggatctcttgaggtcaggagttcgagatcagcctggccagcatggcgaaacgccgtctctactaaaggtataaaggttagccgggcgtggtggcgcatgcctgtggtcccagttgctcagggggctgaggcaggagaatcacttgagcccaggaggcggaggttgcggtgagccgggatcgtgccactgcactccagcctgggcgacagtgcgagactctgtcgcaaaaaagaacaaaa End editing Edited EST: DW415404, type: ag Aligns to: chr12:110732000-110732296 (++) All mismatches: ag (48), ag (50), ag (64), ag (72), ag (127), ag (139), ag (142), ag (213), ag (226), ag (232), ag (244), ag (267), ag (272), ag (295), ag (296), ag (303), ag (304), Editing mismatches: 17, all mismatches: 17, alignment length: 297, cluster length: 257, total number of As: 55 Locations in RNA: 48 50 64 72 127 139 142 213 226 232 244 267 272 295 296 303 304 Locations in genome: 110732031 110732033 110732047 110732055 110732110 110732122 110732125 110732196 110732209 110732215 110732227 110732250 110732255 110732278 110732279 110732286 110732287 Upstream nucleotide (in genome): a t c t a t a t t c a a c c a c a Upstream nucleotide summary: a: 7, c: 5, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): t g c g g c g g g g g g g a c a g Downstream nucleotide summary: a: 2, c: 3, g: 11, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 5, at: 1, ca: 2, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 4, tt: 0, other: 0 >chr12:110732000-110732296 (+) caccacgcccagctaattttttgtacttttaatagagacggggtttcaccgtgttagccaggatggtctcgatctcctgaccttgtgatccgcctgcctcggcctcccaaagtgccgggattacaagtgtgagccactgtgcctggccttcttcttatgtttttctcaaaaaaattatatttggtcagggcatggtagctcatgcctgtagtatcagcagtttgggaagctgaggcgggtggatcagttaaggtcaggaggtcgagaccagcctggccaacatggcaagtccccgtc >DW415404:17-313 (+) caccacgcccagctaattttttgtacttttagtggagacggggtttcgccgtgttggccaggatggtctcgatctcctgaccttgtgatccgcctgcctcggcctcccaaggtgccgggattgcaggtgtgagccactgtgcctggccttcttcttatgtttttctcaaaaaaattatatttggtcagggcatggtggctcatgcctgtggtatcggcagtttgggaggctgaggcgggtggatcagttagggtcgggaggtcgagaccagcctggccggcatggcgggtccccgtc End editing Edited EST: DW416042, type: ag Aligns to: chr12:1044602-1044896 (++) All mismatches: ag (16), ag (30), ag (35), ag (41), ag (61), ag (65), ag (66), ag (90), ag (100), ag (185), ag (273), ag (274), ag (275), ag (276), ag (278), ag (286), Editing mismatches: 16, all mismatches: 16, alignment length: 295, cluster length: 271, total number of As: 68 Locations in RNA: 16 30 35 41 61 65 66 90 100 185 273 274 275 276 278 286 Locations in genome: 1044602 1044616 1044621 1044627 1044647 1044651 1044652 1044676 1044686 1044771 1044859 1044860 1044861 1044862 1044864 1044872 Upstream nucleotide (in genome): n c c a a g a t t a a a a a t t Upstream nucleotide summary: a: 8, c: 2, g: 1, t: 4, other: 1 Downstream nucleotide (in genome): g g c c g a t g c c a a a t c g Downstream nucleotide summary: a: 4, c: 5, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 1, at: 2, ca: 0, cc: 1, cg: 1, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 2, tt: 0, other: 1 >chr12:1044602-1044896 (+) agtggtgtggtctcagctcactgcaaccttcacctcctgggttcaagcgaatctgctgcttcagtctcctgagtagctgagattacaggtgtgcgccaccatgcccggctaaattttgcatttttagtagagacagggccgggcgtggtggctcacgcctgtaatcccaacacttcgggaggctgaggagggcagatcacctgaggtcaggaattcgagaccagcctgaccaacatggaaaaaccccgtctctactaaaaatacaaaattagccgggtgtggtggtgcatgcctg >DW416042:16-310 (+) ggtggtgtggtctcggctcgctgcagccttcacctcctgggttcaggcgggtctgctgcttcagtctcctgagtggctgagattgcaggtgtgcgccaccatgcccggctaaattttgcatttttagtagagacagggccgggcgtggtggctcacgcctgtaatcccagcacttcgggaggctgaggagggcagatcacctgaggtcaggaattcgagaccagcctgaccaacatggaaaaaccccgtctctactaggggtgcaaaattggccgggtgtggtggtgcatgcctg End editing Edited EST: DW418185, type: ag Aligns to: chr12:120939341-120939632 (++) All mismatches: ag (14), ag (16), ag (32), ct (74), ag (76), ag (98), ag (99), ag (105), ag (107), ag (115), ag (135), ag (159), ag (190), ag (202), ag (208), ag (224), ag (234), ag (235), ag (261), ag (276), ag (283), ag (304), Editing mismatches: 21, all mismatches: 22, alignment length: 291, cluster length: 292, total number of As: 85 Locations in RNA: 14 16 32 76 98 99 105 107 115 135 159 190 202 208 224 234 235 261 276 283 304 Locations in genome: 120939341 120939343 120939360 120939404 120939426 120939427 120939433 120939435 120939443 120939463 120939487 120939518 120939530 120939536 120939552 120939562 120939563 120939589 120939604 120939611 120939632 Upstream nucleotide (in genome): n g c c t a a c g c c t a t t t a c a g c Upstream nucleotide summary: a: 5, c: 7, g: 3, t: 5, other: 1 Downstream nucleotide (in genome): g g g g a t c c g c g c a g g a t g c g n Downstream nucleotide summary: a: 3, c: 5, g: 10, t: 2, other: 1 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 2, ca: 0, cc: 2, cg: 4, ct: 0, ga: 0, gc: 0, gg: 3, gt: 0, ta: 2, tc: 1, tg: 2, tt: 0, other: 2 >chr12:120939341-120939632 (+) agagcagcctgggcaacacagggagaccctgtctctagtaagaaaaaaaaaattatggcagccaggtatggtggctcacacctgtaatcccaacacattgggaggcttgaggtgggcagatcacctgatgtcaggatatcgagaccagcctggccaacatggtgaaaccttgtttctactacaaatacaaaaattagctgggcatggtggtaggtacctgtaatcccagctacttggaaggctgaggcaggagaattgcttgaacctgggaggcggaggttgcagtgagcca >DW418185:14-304 (+) gggg-agcctgggcaacacggggagaccctgtctctagtaagaaaaaaaaaattatggcagtcgggtatggtggctcacacctgtggtcccagcgcattggggggcttgaggtgggcagatcgcctgatgtcaggatatcgagaccggcctggccaacatggtgaaaccttgtttctgctacaaatacagaaattggctgggcatggtggtgggtacctgtggtcccagctacttggaaggctgaggcgggagaattgcttgagcctggggggcggaggttgcagtgagccg End editing Edited EST: DW421735, type: ag Aligns to: chr12:62876530-62876813 (++) All mismatches: ag (10), ag (15), ag (38), ag (46), ag (78), ag (83), ag (91), ag (102), ag (111), ag (144), ag (145), ag (148), ag (172), ag (174), ag (191), ag (210), ag (220), ag (239), Editing mismatches: 18, all mismatches: 18, alignment length: 285, cluster length: 229, total number of As: 60 Locations in RNA: 10 15 38 46 78 83 91 102 111 144 145 148 172 174 191 210 220 239 Locations in genome: 62876530 62876534 62876557 62876565 62876597 62876602 62876610 62876621 62876630 62876663 62876664 62876667 62876691 62876693 62876710 62876729 62876739 62876758 Upstream nucleotide (in genome): n c a c g c c t t a a t t t a c c t Upstream nucleotide summary: a: 4, c: 6, g: 1, t: 6, other: 1 Downstream nucleotide (in genome): g g t c g g a g g a t g t g g c g a Downstream nucleotide summary: a: 3, c: 2, g: 10, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 2, ca: 1, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 4, tt: 1, other: 1 >chr12:62876530-62876813 (+) agcc-aggtgcagtggctcatgcttgtaatcttagcactttgggaggctgaggtgggaggatcggttgaggccagtagttcaagactagcctaggcaatatagcaaggccctgtctctaccaaaaaaattgaaaaattagctggacatggtggcatgtacctatagtaccagctccttggaagacggtggtggaaggatcacttgagcccagtagtttgaggctgctgtaagccatgattgtggcattgcactccaggctgggcagtacagcaagatcctgtctc >DW421735:10-294 (+) ggccggggtgcagtggctcatgcttgtagtcttagcgctttgggaggctgaggtgggaggatcggttggggccggtagttcgagactagcctgggcaatatggcaaggccctgtctctaccaaaaaaattgaaaggttggctggacatggtggcatgtacctgtggtaccagctccttggaggacggtggtggaaggatcgcttgagcccggtagtttgaggctgctgtgagccatgattgtggcattgcactccaggctgggcagtacagcaagatcctgtctc End editing Edited EST: DW423493, type: ag Aligns to: chr12:132225749-132226023 (++) All mismatches: ag (18), ag (40), ag (41), ag (53), ag (62), tc (140), ag (171), ag (185), ag (187), ag (193), ag (199), ag (215), ag (216), ag (239), ag (242), ag (248), ag (267), Editing mismatches: 16, all mismatches: 17, alignment length: 275, cluster length: 250, total number of As: 64 Locations in RNA: 18 40 41 53 62 171 185 187 193 199 215 216 239 242 248 267 Locations in genome: 132225750 132225772 132225773 132225785 132225794 132225903 132225917 132225919 132225925 132225931 132225947 132225948 132225971 132225974 132225980 132225999 Upstream nucleotide (in genome): g a a t a c c c t c c a c g a t Upstream nucleotide summary: a: 5, c: 6, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): t a g c g g c c g g a g g g g g Downstream nucleotide summary: a: 2, c: 3, g: 10, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 4, at: 0, ca: 1, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 1, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr12:132225749-132226023 (+) gatccacctgcctcggcccctcaaagtgctgggattacaggcgcaagccaccgtgcccagcctagggttttaatttcatacaattttgatgtcataaaatattattttgtttgtttgtattttttcaaccatttaaaaatgtaaaaaccaggccagccatggtggctcacacctgtagtcccagcactttgggaggccaaggtgggtggatctcttgagctcaggaggtcaagaccaggctgggcaacatagtgagactgtctctacaaaaaaaa >DW423493:17-291 (+) ggtccacctgcctcggcccctcagggtgctgggattgcaggcgcaggccaccgtgcccagcctagggttttaatttcatacaattttgatgtcataaaatattattttgtttgtttgtattttctcaaccatttaaaaatgtaaaaaccaggccggccatggtggctcgcgcctgtggtcccggcactttgggaggccggggtgggtggatctcttgagctcggggggtcaggaccaggctgggcaacatggtgagactgtctctacaaaaaaaa End editing Edited EST: DW427214, type: ag Aligns to: chr12:109259501-109259772 (++) All mismatches: gc (12), ag (14), ag (15), ag (31), ag (32), ag (101), ag (128), ag (129), ag (131), ag (136), ag (144), ag (164), ag (166), ag (167), ag (172), ag (176), ag (180), ag (193), ag (208), ag (212), Editing mismatches: 19, all mismatches: 20, alignment length: 271, cluster length: 200, total number of As: 55 Locations in RNA: 14 15 31 32 101 128 129 131 136 144 164 166 167 172 176 180 193 208 212 Locations in genome: 109259506 109259508 109259524 109259525 109259594 109259621 109259622 109259624 109259629 109259637 109259657 109259659 109259660 109259665 109259669 109259673 109259686 109259701 109259705 Upstream nucleotide (in genome): c t t a a a a t a c t t a c t c c a c Upstream nucleotide summary: a: 7, c: 6, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): t g a t g a t c a g t a t g c g g c g Downstream nucleotide summary: a: 4, c: 3, g: 7, t: 5, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 3, ca: 0, cc: 0, cg: 5, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 2, tg: 1, tt: 1, other: 0 >chr12:109259501-109259772 (+) cgggcatagtggctcacgcctgtaatcccagcactttgggaggccaaggtgggcagataacctgaggtcaggagttcaagaccagcctgtccaagacggtgaaaccctgtctctactgaaaatacaaaaattagccaggtgtggtggtgggtgcctataatctcagctactcaggaggctgaggcaggagaatcgcttgaacccaggaagcagaggttacagtgagtcgaggtcccgccacttcactccagcctggacaacaaagcaagact >DW427214:9-279 (+) cggccg-ggtggctcacgcctgtggtcccagcactttgggaggccaaggtgggcagataacctgaggtcaggagttcaagaccagcctgtccaggacggtgaaaccctgtctctactgaaggtgcaaagattagccgggtgtggtggtgggtgcctgtggtctcggctgctcgggaggctgaggcgggagaatcgcttgagcccgggaagcagaggttacagtgagtcgaggtcccgccacttcactccagcctggacaacaaagcaagact End editing Edited EST: DW429119, type: ag Aligns to: chr12:120899502-120899766 (++) All mismatches: ag (10), ag (11), ac (13), ag (15), ag (16), ag (36), ag (44), ag (52), ag (68), ag (69), ag (76), tc (95), ag (106), ag (133), ag (139), ag (152), ag (182), ag (214), ag (218), ag (219), ag (225), ag (229), ag (237), ag (238), ag (245), ag (261), ag (265), Editing mismatches: 25, all mismatches: 27, alignment length: 264, cluster length: 257, total number of As: 95 Locations in RNA: 10 11 15 16 36 44 52 68 69 76 106 133 139 152 182 214 218 219 225 229 237 238 245 261 265 Locations in genome: 120899502 120899503 120899507 120899508 120899529 120899537 120899545 120899561 120899562 120899569 120899599 120899626 120899632 120899645 120899675 120899707 120899711 120899712 120899718 120899722 120899730 120899731 120899738 120899754 120899758 Upstream nucleotide (in genome): n a g a t g t a a a a a a t t a a a a a t a t a t Upstream nucleotide summary: a: 15, c: 0, g: 2, t: 7, other: 1 Downstream nucleotide (in genome): a c a t a t g a g c a c t a g a a a a a a g a t g Downstream nucleotide summary: a: 13, c: 3, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 7, ac: 3, ag: 2, at: 3, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 1, ta: 4, tc: 0, tg: 3, tt: 0, other: 1 >chr12:120899502-120899766 (+) aacagaatgggccgactcagtcacagtaactgttgatctccatagtagagcaacccacaaagacagaactgatttttttcccataatcaggggtgaaaaatatacaacttgtttctgaaccaaaaccacaatttctgcagtttaaaatgtttcactgctaatatggccctggtagaaattatgtagttttttttcttctttaaaaaaaaaaaattaaaaaaatttcctaagacactaaatcctcaatctggaatgtagattctga >DW429119:10-273 (+) ggccggg-gggccgactcagtcacagtgactgttggtctccatggtagagcaacccacagggacagagctgatttttttcccataaccaggggtgaagaatatacaacttgtttctgaaccaaagccacagtttctgcagtttgaaatgtttcactgctaatatggccctggtggaaattatgtagttttttttcttctttaaaagaaaggaattagaaagatttcctgggacactgaatcctcaatctggagtgtggattctga End editing Edited EST: BQ717524, type: ag Aligns to: chr12:72096237-72096967 (++) All mismatches: ag (1), ag (43), ag (49), ag (60), ag (81), ag (82), ag (94), ag (95), ag (112), ag (122), ag (131), ag (134), ag (174), ag (233), ag (332), ag (340), ag (380), ag (436), ag (469), ca (473), ag (491), ag (514), ag (528), ag (538), ag (540), ag (546), ag (548), ag (559), ag (562), ag (568), ag (578), ag (601), ag (607), ag (615), ag (628), ag (634), ga (658), gt (662), ag (688), Editing mismatches: 36, all mismatches: 39, alignment length: 733, cluster length: 686, total number of As: 180 Locations in RNA: 1 43 49 60 81 82 94 95 112 122 131 134 174 233 332 340 380 436 469 491 514 528 538 540 546 548 559 562 568 578 601 607 615 628 634 688 Locations in genome: 72096237 72096279 72096285 72096296 72096317 72096318 72096330 72096331 72096348 72096358 72096367 72096370 72096410 72096469 72096568 72096576 72096616 72096672 72096705 72096727 72096750 72096764 72096774 72096776 72096782 72096784 72096795 72096798 72096804 72096814 72096836 72096842 72096850 72096863 72096869 72096922 Upstream nucleotide (in genome): n t c c g a c a c a t a t t a c c t a g c c a c g a t t t t t c c c a t Upstream nucleotide summary: a: 9, c: 12, g: 3, t: 11, other: 1 Downstream nucleotide (in genome): g g g c a c a g g g c g a c g g a t t g g g c t a c c a c g t g g g t c Downstream nucleotide summary: a: 6, c: 9, g: 16, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 3, ag: 4, at: 2, ca: 2, cc: 1, cg: 8, ct: 1, ga: 2, gc: 0, gg: 1, gt: 0, ta: 2, tc: 5, tg: 2, tt: 2, other: 1 >chr12:72096237-72096967 (+) aggcgtgcaccatcacgcccggctaatttttgtattttcagtagagacagggtttcgccacgttggctaggctggtctcgaactcctgacctcaagtgatctgcccatctcagcctcccaaagatctattacaagatgtgagccactgtgcccagccaccagggcatgtttttaaaaaagtactgatgtctgggtttcacactgcaaaattctgatttatctgatctaaggtacagcctggatattgagactttttaaagctctgactgtacattgaatcatcatgtaaggagtttttaaaacattgttgccagggcccctttctagaccaagttagtcagaatgttggacaatgaggcccatgcatgggtatttttacaaagctctctgggagattctaatgcttaaccaaattgagaagcactgaataagaatatcctgggccgggcgcactggctcatgcctgtaatcccagcattttggaaggccgaggcgggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaacaccgtctctactaaaaatacaaaaaattaggtgtgg-tggtgcgtgcctgtattcccagccactcaggaggctgaggcaggagaatcgctggaacctg-ggatgtggaggttgcagtgagccaagattgcaccactgtactccagcctgggcaacagagggagactccatctagactccatctc >BQ717524:1-733 (+) gggcgtgcaccatcacgcccggctaatttttgtattttcagtggagacggggtttcgccgcgttggctaggctggtctcgggctcctgacctcgggtgatctgcccatctcggcctcccaaggatctattgcaggatgtgagccactgtgcccagccaccagggcatgtttttgaaaaagtactgatgtctgggtttcacactgcaaaattctgatttatctgatctaaggtgcagcctggatattgagactttttaaagctctgactgtacattgaatcatcatgtaaggagtttttaaaacattgttgccagggcccctttctagaccaggttagtcggaatgttggacaatgaggcccatgcatgggtatttttacgaagctctctgggagattctaatgcttaaccaaattgagaagcactgaataagaatgtcctgggccgggcgcactggctcatgcctgtagtccaagcattttggaaggccggggcgggtggatcacttgaggtcgggagttcgagaccggcctggccagcgtggtggagcaccgtctctgctgaaaatgcaaaaaattgngtgtgggtggtgcgtgcctgtgttcccggccactcgggaggctgaggcgggagagtcgctggaacctgnggatgtggaagtttcagtgagccaagattgcaccactgtgctccagcctgggcaacagagggagactccatctagactccatctc End editing Edited EST: CD673161, type: ag Aligns to: chr12:102135867-102136369 (++) All mismatches: ga (11), ag (47), ag (48), ag (51), ag (63), ga (73), ag (79), ag (86), ag (88), ag (131), ag (146), ag (154), ag (155), ag (177), ag (178), ag (184), ag (188), ag (190), ag (193), ag (204), ag (215), ag (218), ag (234), ag (245), ag (255), ag (268), ag (273), ag (275), ag (276), ag (341), ac (431), Editing mismatches: 28, all mismatches: 31, alignment length: 503, cluster length: 295, total number of As: 98 Locations in RNA: 47 48 51 63 79 86 88 131 146 154 155 177 178 184 188 190 193 204 215 218 234 245 255 268 273 275 276 341 Locations in genome: 102135913 102135914 102135917 102135929 102135945 102135952 102135954 102135997 102136012 102136020 102136021 102136043 102136044 102136050 102136054 102136056 102136059 102136070 102136081 102136084 102136100 102136111 102136121 102136134 102136139 102136141 102136142 102136207 Upstream nucleotide (in genome): t a a a a c c a a a a c a g c t a t t t t t t t a a a c Upstream nucleotide summary: a: 13, c: 5, g: 1, t: 9, other: 0 Downstream nucleotide (in genome): a g c g a c g g g a a a t a t a g t t t c c a a a a t g Downstream nucleotide summary: a: 11, c: 4, g: 7, t: 6, other: 0 Dinucleotide summary: aa: 5, ac: 1, ag: 5, at: 2, ca: 1, cc: 1, cg: 2, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 4, tc: 2, tg: 0, tt: 3, other: 0 >chr12:102135867-102136369 (+) aaaactcatagaaatgtctccatagataaactactcagtaggtaataagaacagcatctttaagggtatggaggcataaaagtgcacagcacatttgggaaaatgcaacgtggctgacacaatgaggccaagaatgaggctggcaagagaggaaaatcaggattccaactggcaccaattgtgaatcataaaagccaccatttatggcgcatttattatgtggcaggtactgtactaatgctttacatttttttaaatcctttcagtaatgaaaaatttacaaggttcactgtactctctatcaacagatttgatttttccaattgctttcaagtatggcagcttgccttcaccttgagtacctaatccaggaacttggtcttccacctgcaccatctctaatctgtgaagctggaaggtgatgttttgtaagcccagcatccctcccctccttccttgggtaaaaatctccatccctctggctacagaggtgggcacagagc >CD673161:1-503 (+) aaaactcataaaaatgtctccatagataaactactcagtaggtaatgggagcagcatctttaggggtatggaagcatagaagtgcgcggcacatttgggaaaatgcaacgtggctgacacaatgaggccaggaatgaggctggcaggagaggaggatcaggattccaactggcaccggttgtggatcgtgaaggccaccatttgtggcgcatttgttgtgtggcaggtactgtgctaatgctttgcatttttttgaatcctttcagtgatgagaggtttacaaggttcactgtactctctatcaacagatttgatttttccaattgctttcaagtatggcggcttgccttcaccttgagtacctaatccaggaacttggtcttccacctgcaccatctctaatctgtgaagctggaaggtgatgttttgtcagcccagcatccctcccctccttccttgggtaaaaatctccatccctctggctacagaggtgggcacagagc End editing Edited EST: AW275384, type: ga Aligns to: chr12:58159789-58159983 (++) All mismatches: ga (56), ga (77), ga (82), ga (97), ga (113), ga (137), ga (158), gt (163), ga (171), ga (176), ga (185), ga (186), ga (188), ga (193), ga (199), Editing mismatches: 14, all mismatches: 15, alignment length: 195, cluster length: 144, total number of Gs: 50 Locations in RNA: 56 77 82 97 113 137 158 171 176 185 186 188 193 199 Locations in genome: 58159840 58159861 58159866 58159881 58159897 58159921 58159942 58159955 58159960 58159969 58159970 58159972 58159977 58159983 Upstream nucleotide (in genome): a c c c c c t c c c g c t t Upstream nucleotide summary: a: 1, c: 9, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g g g c a g g g a g c c c n Downstream nucleotide summary: a: 2, c: 4, g: 7, t: 0, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 2, cc: 2, cg: 5, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 1 >chr12:58159789-58159983 (+) cgcagtgagcagtccgcaagcccgctggcggcagcggcggtgctccgtccagggcgagaagctgcagcgctcgggccggggtccctcctgtcgcagcagctcctcgacgagtgcaggggcagccacgtacacggtgcgcactgtcccaaagctggctagccacaccggcccgaagtgcgcggcgccctgcacctg >AW275384:5-199 (+) cgcagtgagcagtccgcaagcccgctggcggcagcggcggtgctccgtccaaggcgagaagctgcancgctcaggccagggtccctcctgtcacancagctcctcgacaagtgcangggcanccacntacacagtgcgcactgtcccaaagctagctatccacaccagcccaaagtgcgcaacaccctacaccta End editing Edited EST: AW277224, type: ga Aligns to: chr12:7053630-7053818 (++) All mismatches: ga (43), ga (46), ga (47), ca (48), ga (61), ga (64), ga (73), ga (76), ga (83), ga (100), ga (102), ga (106), ga (110), ga (112), ga (117), ga (118), ga (119), ga (125), ga (129), ga (139), ga (140), ga (141), ga (148), ga (151), ga (158), ga (160), ga (163), ga (169), ga (175), ga (178), ga (187), ga (190), ga (207), ga (216), ga (222), ga (223), ga (224), ga (227), Editing mismatches: 37, all mismatches: 38, alignment length: 188, cluster length: 186, total number of Gs: 65 Locations in RNA: 43 46 47 61 64 73 76 83 100 102 106 110 112 117 118 119 125 129 139 140 141 148 151 158 160 163 169 175 178 187 190 207 216 222 223 224 227 Locations in genome: 7053630 7053633 7053635 7053649 7053652 7053661 7053664 7053671 7053688 7053690 7053694 7053698 7053700 7053705 7053706 7053707 7053713 7053717 7053727 7053728 7053729 7053736 7053739 7053746 7053748 7053751 7053757 7053763 7053766 7053775 7053778 7053795 7053804 7053810 7053811 7053812 7053815 Upstream nucleotide (in genome): n c c c a a c c t c t c a c g g c t t g g t t c t t t c a a a g t g g g a Upstream nucleotide summary: a: 7, c: 11, g: 8, t: 10, other: 1 Downstream nucleotide (in genome): g c c g g g t c c c g a g g g a c c g g t c c t c c g c a g g c c g g a g Downstream nucleotide summary: a: 4, c: 14, g: 16, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 6, at: 0, ca: 1, cc: 6, cg: 2, ct: 2, ga: 2, gc: 1, gg: 4, gt: 1, ta: 0, tc: 7, tg: 3, tt: 0, other: 1 >chr12:7053630-7053818 (+) ggcgcgcagtggtcctcgcggaggtgatccaggcgttctccgccccggagaatgcagtgcgcatggacgaggctcgggataacgcctgcaacgacatgggtaagatgctgcaattcgtgctgcccgtggccacgcagatccagcaggaggttatcaaagcctatggcttcagctgcgacggggaaggtg >AW277224:43-230 (+) agca-aaagtggtcctcgcagaagtgatccaagcattctccaccccggagaatgcagtacacatagacaaagctcaaaataacacctacaacgacataaataagatactacaattcatactacccgtagccacacaaatccagcaagaagttatcaaagcctatgacttcagctacgacgaaaaaagtg End editing Edited EST: AW662136, type: ga Aligns to: chr12:58142024-58142401 (++) All mismatches: ga (68), ga (109), ga (124), ga (127), ga (136), ga (143), ga (151), ga (169), ga (176), ga (179), ga (180), ga (182), ga (185), ga (203), ga (211), ga (221), ga (232), ga (240), ga (242), ga (247), ga (248), ga (268), ga (269), ga (283), ga (293), ga (294), ga (311), ga (319), ga (323), ga (326), ga (336), ga (340), ga (354), ga (356), ga (358), ga (359), ga (360), ga (367), Editing mismatches: 38, all mismatches: 38, alignment length: 378, cluster length: 300, total number of Gs: 86 Locations in RNA: 68 109 124 127 136 143 151 169 176 179 180 182 185 203 211 221 232 240 242 247 248 268 269 283 293 294 311 319 323 326 336 340 354 356 358 359 360 367 Locations in genome: 58142091 58142132 58142147 58142150 58142159 58142166 58142174 58142192 58142199 58142202 58142203 58142205 58142208 58142226 58142234 58142244 58142255 58142263 58142265 58142270 58142271 58142291 58142292 58142306 58142315 58142316 58142334 58142342 58142346 58142349 58142358 58142362 58142377 58142379 58142381 58142382 58142383 58142390 Upstream nucleotide (in genome): a a a a a t a t a t g a a a a t t a g t g t g t c g t a t t c a t t t g g a Upstream nucleotide summary: a: 15, c: 2, g: 7, t: 14, other: 0 Downstream nucleotide (in genome): a g g a g t g t a g a g g a g c t g a g c g c c g a t a c c a g t t g g t t Downstream nucleotide summary: a: 9, c: 6, g: 15, t: 8, other: 0 Dinucleotide summary: aa: 5, ac: 0, ag: 9, at: 1, ca: 1, cc: 0, cg: 1, ct: 0, ga: 3, gc: 2, gg: 1, gt: 1, ta: 0, tc: 4, tg: 4, tt: 6, other: 0 >chr12:58142024-58142401 (+) ttatttctttgttttgtttttcctgtataaaaaaggaccccaaatataaaggtagggaaagggacaagagggaacataccccttagtgtagagaaatgggaaggagaaggagaagcctcaaaaggagaggtgggaggggaatgtcattaaggcagcaaagtaatctctgtagaaagatggaggaggaccctccatagcctcagagataaaggcaaagattgccctctcagtgtccagaagggaaatggcagcttttcttccttccatggcagccactccattgctcactc-cggattaccttcatccttatgtagataagagtgctgcagagct-cgaaaggcagagattcgcttgtgtgggttaaaagtcagcatttcc >AW662136:1-378 (+) ttatttctttgttttgtttttcctgtataaaaaaggaccccaaatataaaggtagggaaagggacaaaagggaacataccccttantgtananaaatgggaaggagaaagagaancctcaaaaagaaangtgggaagggaatatcattaaagcancaaantaatctctatanaaaaataaaagaagaccctccatancctcaaanataaaagcaaagattaccctctcagtatccagaaagaaaataacagcttttcttccttccataacagccactccattactcactcncaa-ttaccttcatccttatatagataaaagtactacagagcttcaaaaa-cagagattcgcttatataaattaaaaatcagcatttcc End editing Edited EST: AW827582, type: ga Aligns to: chr12:116384097-116384516 (++) All mismatches: ga (231), ga (235), ga (237), ga (254), ga (258), ga (266), ga (267), ga (290), ga (304), ga (305), ga (330), ga (332), ga (349), ga (365), ga (380), ga (381), ga (392), ga (394), ga (399), ga (427), ga (432), Editing mismatches: 21, all mismatches: 21, alignment length: 420, cluster length: 202, total number of Gs: 38 Locations in RNA: 231 235 237 254 258 266 267 290 304 305 330 332 349 365 380 381 392 394 399 427 432 Locations in genome: 116384288 116384292 116384294 116384311 116384315 116384323 116384324 116384347 116384361 116384362 116384387 116384389 116384406 116384422 116384437 116384438 116384449 116384451 116384456 116384484 116384489 Upstream nucleotide (in genome): a a a t c t g t t g t t t t t g t t t a t Upstream nucleotide summary: a: 4, c: 1, g: 3, t: 13, other: 0 Downstream nucleotide (in genome): g a g c g g a t g t t t a c g a t c a a t Downstream nucleotide summary: a: 6, c: 3, g: 6, t: 6, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 2, gc: 0, gg: 0, gt: 1, ta: 2, tc: 3, tg: 3, tt: 5, other: 0 >chr12:116384097-116384516 (+) gcacctgctacacaggggtgaactcgaagacattatgccaagtgaaataagctggtcacaaaaggacaaatactgcgtgattccattcataggaggtgcctagaggagtcaagatcacagagacagaaagaatagtggtgtcagcgactggggagttagcgtttgatgggcacagggtttgttttgcaagaggaagaggttctggagattgtttgcacggcactgtggagctgctcaaccctactgagttgtacacttaaaagtggttaagatggtacatttcacattatgtgtatttttaccacaattgaattattttttaaatgcacccattttaaatggataattccctgtgctttgacaaatataacaccaccaactaaaacagagatgttcctctcactctactaagttccctca >AW827582:40-459 (+) gcacctgctacacaggggtgaactcgaagacattatgccaagtgaaataagctggtcacaaaaggacaaatactgcgtgattccattcataggaggtgcctagaggagtcaagatcacagagacagaaagaatagtggtgtcagcgactggggagttagcgtttgatgggcacagggtttgttttgcaagaagaaaaagttctggagattgtttacacagcactgtaaagctgctcaaccctactgagttatacacttaaaagtaattaagatggtacatttcacattatatatatttttaccacaattaaattattttttaaatacacccattttaaataaataattccctatactttaacaaatataacaccaccaactaaaacaaagatattcctctcactctactaanttccctca End editing Edited EST: BE045395, type: ga Aligns to: chr12:103352137-103352724 (++) All mismatches: ga (112), ga (165), ga (169), ga (179), ga (188), ga (191), ga (205), ga (225), ga (237), ga (241), ga (244), ga (249), ga (251), ga (254), ga (259), ga (263), ga (265), ga (269), ga (275), ga (277), ga (311), ga (319), ga (328), ga (331), ga (333), ga (342), ga (348), ga (368), ga (372), ga (375), ga (379), ga (381), ga (389), ga (391), ga (393), ga (412), ga (421), ga (423), ga (430), ga (433), ga (441), ga (445), ga (448), ga (456), ga (484), ga (489), ga (498), ga (502), ga (507), ga (510), ga (526), ga (529), ga (530), ga (532), ga (534), ga (549), ga (554), ga (559), ga (561), ga (564), ga (567), ga (570), gc (577), Editing mismatches: 62, all mismatches: 63, alignment length: 588, cluster length: 459, total number of Gs: 140 Locations in RNA: 112 165 169 179 188 191 205 225 237 241 244 249 251 254 259 263 265 269 275 277 311 319 328 331 333 342 348 368 372 375 379 381 389 391 393 412 421 423 430 433 441 445 448 456 484 489 498 502 507 510 526 529 530 532 534 549 554 559 561 564 567 570 Locations in genome: 103352248 103352301 103352305 103352315 103352324 103352327 103352341 103352361 103352373 103352377 103352380 103352385 103352387 103352390 103352395 103352399 103352401 103352405 103352411 103352413 103352447 103352455 103352464 103352467 103352469 103352478 103352484 103352504 103352508 103352511 103352515 103352517 103352525 103352527 103352529 103352548 103352557 103352559 103352566 103352569 103352577 103352581 103352584 103352592 103352620 103352625 103352634 103352638 103352643 103352646 103352661 103352664 103352665 103352668 103352670 103352685 103352690 103352695 103352697 103352700 103352703 103352706 Upstream nucleotide (in genome): a c c c c c c c c c c c c c c c c c c c c c c c c a t c c c c a c c c c c c c c a a c c c t t c c c c c g c a c a c a a a a Upstream nucleotide summary: a: 11, c: 47, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g c a c c g g c g c t c c c a c a c c t g t g c g a a c g g a t c c c a c g c c g g t c a a g g c g t g a a g c c a g c g c Downstream nucleotide summary: a: 12, c: 25, g: 19, t: 6, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 6, at: 1, ca: 8, cc: 22, cg: 12, ct: 5, ga: 1, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chr12:103352137-103352724 (+) gcggccgcagccgccgcagcggcagcgcagagcgcgcagcagcagcagcagcagcagcagcagcagcagcaggcgccgcagctgagaccggcggccgacggccagccctcagggggcggtcacaagtcagcgcccaagcaagtcaagcgacagcgctcgtcttcgcccgaactgatgcgctgcaaacgccggctcaacttcagcggctttggctacagcctgccgcagcagcagccggccgccgtggcgcgccgcaacgagcgcgagcgcaaccgcgtcaagttggtcaacctgggctttgccacccttcgggagcacgtccccaacggcgcggccaacaagaagatgagtaaggtggagacactgcgctcggcggtcgagtacatccgcgcgctgcagcagctgctggacgagcatgacgcggtgagcgccgccttccaggcaggcgtcctgtcgcccaccatctcccccaactactccaacgacttgaactccatggccggctcgccggtctcatcctact-cgtcggacgagggctcttacgacccgctcagccccgaggagcaggagcttctcgacttcaccaac >BE045395:1-588 (+) gcggccgcagccgccgcagcggcagcgcagagcgcgcagcagcagcagcagcagcagcagcagcagcagcaggcgccgcagctgagaccggcggccgacggccagccctcaaggggcggtcacaagtcancgcccaagcaagtcaagcgacagcgctcgtcttcacccaaactgatgcactgcaaacaccagctcaacttcancagctttggctacagcctgccacancancagccagccaccatggcacaccacaacaagcacaagcacaaccacatcaagttggtcaacctgngctttgccacccttcaggagcacatccccaacagcacagccaacaaaaagataagtaaggtggagacactgcactcagcagtcaaatacatccacacactgcagcagctgctggacaagcatgacacagtgagcaccaccttccaagcaagcatcctgtcacccaccatctcccccaactactccaacaacttaaactccatagccagctcaccagtctcatcctactncatcaa-caaaggctcttacnacccactcaaccccaaagaacaagaacttctccacttcaccaac End editing Edited EST: AA484785, type: ag Aligns to: chr12:1616089-1616498 (++) All mismatches: ag (149), ag (157), ag (166), ag (188), ag (192), ag (211), ag (215), ag (219), ag (220), ag (222), ag (229), ag (234), ag (241), ag (286), ca (288), ag (292), ag (293), ag (319), ag (346), Editing mismatches: 18, all mismatches: 19, alignment length: 408, cluster length: 200, total number of As: 55 Locations in RNA: 149 157 166 188 192 211 215 219 220 222 229 234 241 286 292 293 319 346 Locations in genome: 1616230 1616238 1616247 1616269 1616273 1616292 1616296 1616300 1616301 1616303 1616311 1616316 1616323 1616368 1616374 1616375 1616401 1616429 Upstream nucleotide (in genome): c c a a c c a c a g c a c t t a c c Upstream nucleotide summary: a: 6, c: 9, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g c t g g g t a g c g c a c a t g g Downstream nucleotide summary: a: 3, c: 4, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 3, ca: 2, cc: 1, cg: 6, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr12:1616089-1616498 (+) gtttccacaacatcgtgaatgagtttagtgccacagcattaaatgtattcatggtgtacttgtgtacttatgaatggctaagatgataaatattatgtacattttaccacaataaaaaagtaatgaattctggccaggtacagtggctcacccctgtaatcccagcactttgggaggctaaggcaggctgatcacttgaggtcaggaattcaagaccagcccagccaacatggcaaaaccccatctctactaaaaatatagccaggcgtggtggcgcatacctgtaatctctgctatttgggagactgaggcaggagaatcgcatgaacccgggaggtgcaggttgcagtgagccaagattgtaccactgcactccaacctgggttacagcatctcaaaaaaaaaaaaaa >AA484785:8-415 (+) gtttccacaacatcgtgaatgagtttagtgccacagcattaaatgtattcatggtgtacttgtgtacttatgaatggctaagatgataaatattatgtacattttaccacaataaaaaagtaatgaattctggccaggtacggtggctcgcccctgtagtcccagcactttgggaggctagggcgggctgatcacttgaggtcgggagttcggggccagcc-ggccagcatggcgaaaccccatctctactaaaaatatagccaggcgtggtggcgcatgcatgtggtctctgctatttgggagactgaggcgggagaatcgcatgaacccgggag-tgcgggttgcagtgagccaagattgtaccactgcactccaacctgggttacagcatctcaaaaaaaaaaaaaa End editing Edited EST: DA079267, type: ag Aligns to: chr13:103489151-103489719 (++) All mismatches: ag (238), ag (245), ag (282), ag (307), ag (326), ag (331), ag (335), ag (339), ag (357), ag (363), ag (367), ag (393), ag (423), ag (453), ag (454), ag (461), Editing mismatches: 16, all mismatches: 16, alignment length: 569, cluster length: 224, total number of As: 56 Locations in RNA: 238 245 282 307 326 331 335 339 357 363 367 393 423 453 454 461 Locations in genome: 103489388 103489395 103489432 103489457 103489476 103489481 103489485 103489489 103489507 103489513 103489517 103489543 103489573 103489603 103489604 103489611 Upstream nucleotide (in genome): c t c c a t c c t c t c g t a a Upstream nucleotide summary: a: 3, c: 7, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g g g t a g g t g g c a g a g g Downstream nucleotide summary: a: 3, c: 1, g: 10, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 0, ca: 1, cc: 0, cg: 4, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 3, tt: 0, other: 0 >chr13:103489151-103489719 (+) cttttaccgatgccacactctcaattgttgtttatactaaatcctgaaattagatagcacgaattctctgaatttttctttttcttaaagattgttttggctcttctaggaccttggcttttccataaaaattttagaatttgtccttttaattagagtttgtaaagattttgatgaggatagaatctatagaattcataattttggctgggcgcggtggctcatgcttgtaatcccagcgcttaggtgggaggatcacttcagctcaggagttcgagaccagccttggcactatggcgaaaccccatctctactaaaacgacaaaaattagccaggcatggtggcatgtgcgtgtagtttcagctactcgggaggctgaggggggaggatcaactgagcctgggaggtcgaggctgcagtgagctgagattgcaccactgcactcctccctaagtgataaggtgagaccctgtctcataaagaaagaaagaattcatagtttagttttggaagaattgacatcataacaacatggactatatctttacttaattagagctttaatttc >DA079267:1-569 (+) cttttaccgatgccacactctcaattgttgtttatactaaatcctgaaattagatagcacgaattctctgaatttttctttttcttaaagattgttttggctcttctaggaccttggcttttccataaaaattttagaatttgtccttttaattagagtttgtaaagattttgatgaggatagaatctatagaattcataattttggctgggcgcggtggctcatgcttgtaatcccggcgcttgggtgggaggatcacttcagctcaggagttcgagaccggccttggcactatggcgaaaccccgtctctactaaaacgacaagaattggccgggcgtggtggcatgtgcgtgtggtttcggctgctcgggaggctgaggggggaggatcgactgagcctgggaggtcgaggctgcagtgggctgagattgcaccactgcactcctccctgggtgatagggtgagaccctgtctcataaagaaagaaagaattcatagtttagttttggaagaattgacatcataacaacatggactatatctttacttaattagagctttaatttc End editing Edited EST: DA095397, type: ag Aligns to: chr13:73519149-73519711 (++) All mismatches: ag (60), ag (62), ag (90), ag (105), ag (118), ag (119), ag (122), ag (123), ag (124), ag (135), ag (226), ag (253), ag (292), ag (296), ag (323), ag (324), ag (390), ag (401), ag (409), ga (478), Editing mismatches: 19, all mismatches: 20, alignment length: 564, cluster length: 350, total number of As: 79 Locations in RNA: 60 62 90 105 118 119 122 123 124 135 226 253 292 296 323 324 390 401 409 Locations in genome: 73519208 73519210 73519238 73519253 73519266 73519267 73519270 73519271 73519272 73519283 73519374 73519401 73519440 73519444 73519471 73519472 73519538 73519549 73519557 Upstream nucleotide (in genome): c g t t t a t a a t t t c t t a t g t Upstream nucleotide summary: a: 4, c: 2, g: 2, t: 11, other: 0 Downstream nucleotide (in genome): g g t g a g a a a t t t c g a a c g g Downstream nucleotide summary: a: 6, c: 2, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 1, at: 0, ca: 0, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 3, tc: 1, tg: 3, tt: 4, other: 0 >chr13:73519149-73519711 (+) tcatacccaatagtttttcaacccttggccccctctccctctccccattgctagttcccagagtctgttgttcccatctttatgtccatatgtatgcaatgtttagttcccacttataagtaaaaatatggagtatttggctttctgtttgtgcattaaatcacttagggtagtggcctccagctgcatctgtgttgctgcaaggacacaatttcattcttttttattgctgcatagtatcccatggtgtatatgtatgataatttctttatccaatccattgttatgggcacgtaggttgattccatgtcttcattattgtaaatggtgctgtgatgggcatgtgagtgcatgtgtttggtagatgatttatgttcctttgggtttatacccagtaatgagattgctaggttgaatgatagctgtgtttcaagttctttgagaaatctccaaactgctttccacaatggctgaactgacttacattcctaccaacaatatacaagcattccctttt-ctcctcagcctcaccagttttgactttttaataaaagctattctga >DA095397:1-564 (+) tcatacccaatagtttttcaacccttggccccctctccctctccccattgctagttcccggggtctgttgttcccatctttatgtccatgtgtatgcaatgtttggttcccacttatgggtgggaatatggagtgtttggctttctgtttgtgcattaaatcacttagggtagtggcctccagctgcatctgtgttgctgcaaggacacaatttcattcttttttgttgctgcatagtatcccatggtgtatgtgtatgataatttctttatccaatccattgttatgggcgcgtgggttgattccatgtcttcattattgtggatggtgctgtgatgggcatgtgagtgcatgtgtttggtagatgatttatgttcctttgggtttatgcccagtaatgggattgctgggttgaatgatagctgtgtttcaagttctttgagaaatctccaaactgctttccacaatggctgaactaacttacattcctaccaacaatatacaagcattccctttttctcctcagcctcaccagttttgactttttaataaaagctattctga End editing Edited EST: DA163847, type: ag Aligns to: chr14:61456605-61457181 (++) All mismatches: ag (169), ag (171), ag (177), ag (197), ag (226), ag (246), ag (247), ag (276), ag (332), ag (333), ag (334), ag (336), ag (367), ag (368), ag (407), ag (408), ag (423), Editing mismatches: 17, all mismatches: 17, alignment length: 579, cluster length: 255, total number of As: 54 Locations in RNA: 169 171 177 197 226 246 247 276 332 333 334 336 367 368 407 408 423 Locations in genome: 61456771 61456773 61456779 61456799 61456828 61456848 61456849 61456878 61456934 61456935 61456936 61456938 61456969 61456970 61457009 61457010 61457025 Upstream nucleotide (in genome): c g c a a c a t g a a c c a c a c Upstream nucleotide summary: a: 7, c: 7, g: 2, t: 1, other: 0 Downstream nucleotide (in genome): g g c t c a g g a a c g a a a a g Downstream nucleotide summary: a: 7, c: 3, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 1, at: 1, ca: 3, cc: 1, cg: 3, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr14:61456605-61457181 (+) ctctgaaagacaagtcacgctttcctagttcttcctgtttcatcaaacactccttttctcttctgttgaattctcttaatctccccatcctctaaacattggtgtacccctgggactattcctctgatctcttttcttttcccttcttttc--ttttttttttgagacagagtctcactctgtcacccaggctggaatgcaatggtgtgattttggctcactgtaacctccgtcctgcagggttcaagcgattctcctgcctcagccgtctgagtaggtgggattatagatgtgtgccaccacacccagataagttttgtatttttagtagaaacagggttttgccatgttggccaggctggtctcaaacttctggcttcaagtgatccacccaccttgtcctcccaaagtgctgggattacaggtgtgagtgatctcttttcttttacactcattatcgggctcatggtgattctgaaatttatatccctggcctggaactctcccctgaatttcagtctcatctccagctgcctccgtgacatctccacttggatgtctaacagctcagatttgtaa >DA163847:1-579 (+) ctctgaaagacaagtcacgctttcctagttcttcctgtttcatcaaacactccttttctcttctgttgaattctcttaatctccccatcctctaaacattggtgtacccctgggactattcctctgatctcttttcttttcccttcttttcttttttttttttgagacggggtctcgctctgtcacccaggctggagtgcaatggtgtgattttggctcactgtagcctccgtcctgcagggttcgggcgattctcctgcctcagccgtctgagtgggtgggattatagatgtgtgccaccacacccagataagttttgtatttttagtaggggcggggttttgccatgttggccaggctggtctcggacttctggcttcaagtgatccacccaccttgtcctcccggagtgctgggattacgggtgtgagtgatctcttttcttttacactcattatcgggctcatggtgattctgaaatttatatccctggcctggaactctcccctgaatttcagtctcatctccagctgcctccgtgacatctccacttggatgtctaacagctcagatttgtaa End editing Edited EST: DB298601, type: ag Aligns to: chr14:105382502-105382772 (++) All mismatches: ag (302), ag (323), ag (325), ag (333), ag (336), ag (339), ag (341), ag (346), ag (349), ag (350), ag (359), ag (368), ag (371), gt (374), ag (375), ag (385), ag (394), ag (420), ag (428), ag (459), at (493), Editing mismatches: 19, all mismatches: 21, alignment length: 271, cluster length: 158, total number of As: 38 Locations in RNA: 302 323 325 333 336 339 341 346 349 350 359 368 371 375 385 394 420 428 459 Locations in genome: 105382506 105382527 105382529 105382537 105382540 105382543 105382545 105382550 105382553 105382554 105382563 105382572 105382575 105382579 105382589 105382598 105382624 105382632 105382663 Upstream nucleotide (in genome): a t c c c c c a t a t t a g t c a t t Upstream nucleotide summary: a: 5, c: 6, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): a c g c c c c c a t t g a g t g g c c Downstream nucleotide summary: a: 3, c: 8, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 1, ca: 0, cc: 4, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 3, tg: 1, tt: 2, other: 0 >chr14:105382502-105382772 (+) ctcaaactcccacataggtgggactacaggtgtgcaccaccacacccaactaattttttgtattttttgtagaaatgaggttttgctatgtttcccaggctgctctcaaactcttgagctcaagcgatctacccaccttggcctcccaaagtgctgggattacaggcgtaagccattgttcccagcctaaggaaaatttttaatgttaaatttgaattggaactatcaataggaactcatgatttaacctgggtttctaaatgccatttcc >DB298601:298-568 (+) ctcagactcccacataggtgggactgcgggtgtgcgccgccgcgcccagctggttttttgtgttttttgtggagattgggttttgctgtgtttcccgggctgctctcaaactcttgagctcaggcgatctgcccaccttggcctcccaaagtgctgggattgcaggcgtaagccattgttcccagcctaaggaaattttttaatgttaaatttgaattggaactatcaataggaactcatgatttaacctgggtttctaaatgccatttcc End editing Edited EST: DW423110, type: ag Aligns to: chr14:56143944-56144214 (++) All mismatches: ag (15), ag (32), ag (45), ag (55), ag (63), ag (64), ag (69), ag (79), ag (81), ag (88), ag (89), ag (101), ag (104), ag (107), ag (113), ag (119), ag (145), ag (155), ag (159), ag (175), ag (178), ag (186), ag (198), ag (211), ga (285), Editing mismatches: 24, all mismatches: 25, alignment length: 271, cluster length: 197, total number of As: 52 Locations in RNA: 15 32 45 55 63 64 69 79 81 88 89 101 104 107 113 119 145 155 159 175 178 186 198 211 Locations in genome: 56143944 56143961 56143974 56143984 56143992 56143993 56143998 56144008 56144010 56144017 56144018 56144030 56144033 56144036 56144042 56144048 56144074 56144084 56144088 56144104 56144107 56144115 56144127 56144140 Upstream nucleotide (in genome): n a c c c a c a c a a t t a a t c t c a a g c g Upstream nucleotide summary: a: 9, c: 8, g: 2, t: 4, other: 1 Downstream nucleotide (in genome): g g c g a g g c t a c c a a a g g c g g t a g g Downstream nucleotide summary: a: 6, c: 5, g: 11, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 3, at: 1, ca: 1, cc: 1, cg: 5, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 1 >chr14:56143944-56144214 (+) agtactttgggaggccaaggtgggcggatcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaacccccgtctctactaaaaatacaaaaattagccgggtgtggtggtgcgcacctgcagtctcagctactcaggaggctgaggcagaagaattgcttgaatccgggaggcagaggttgcagtgagccgagattacgctactgcactctagcctgggtgacagagaaagactgtcta-aaaaaaaaaaaaaaaaaaaaag >DW423110:15-285 (+) ggtactttgggaggccagggtgggcggatcgcctgaggtcgggagttcgggaccggcctggccagcgtggtgaggcccccgtctctgctgaagatacagaaattggccgggtgtggtggtgcgcacctgcggtctcagctgctcgggaggctgaggcagaggagttgcttggatccgggaggcggaggttgcagtgggccgagattacgctactgcactctagcctgggtgacagagaaagactgt-tacaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: BG054622, type: ga Aligns to: chr14:23233589-23233863 (++) All mismatches: ga (107), ga (136), ga (158), ga (171), ga (183), ga (217), ga (218), ga (221), ga (222), ga (225), ga (227), ga (237), ga (245), ga (249), Editing mismatches: 14, all mismatches: 14, alignment length: 275, cluster length: 143, total number of Gs: 39 Locations in RNA: 107 136 158 171 183 217 218 221 222 225 227 237 245 249 Locations in genome: 23233695 23233724 23233746 23233759 23233771 23233805 23233806 23233809 23233810 23233813 23233815 23233825 23233833 23233837 Upstream nucleotide (in genome): a c t g a t g t g t g a a t Upstream nucleotide summary: a: 4, c: 1, g: 4, t: 5, other: 0 Downstream nucleotide (in genome): a t a a g g t g t g c g t a Downstream nucleotide summary: a: 4, c: 1, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 1, ca: 0, cc: 0, cg: 0, ct: 1, ga: 1, gc: 1, gg: 0, gt: 2, ta: 2, tc: 0, tg: 3, tt: 0, other: 0 >chr14:23233589-23233863 (+) aaaactacaataattttatttatttgcttgtaattttgcaatgtgggctcaaatagcctttctttgctccacacgcagtcacctgaggtggctccagtgggctggagaatccactttttaaatggccttcttcacgtggctggcaaaagttggtgttgactgctggctgggagttcaactgaggctgttggcccaaacctcagttcttcttcacatggttggttgggcttttcacaggcagtaagtctgagaagtcaaacttctaacacagcagc >BG054622:1-275 (+) aaaactacaataattttatttatttgcttgtaattttgcaatgtgggctcaaatagcctttctttgctccacacgcagtcacctgaggtggctccagtgggctggaaaatccactttttaaatggccttcttcacatggctggcaaaagttggtgttaactgctggctggaagttcaactgaagctgttggcccaaacctcagttcttcttcacataattaattagacttttcacaagcantaaatctaagaagtcaaacttctaacacagcagc End editing Edited EST: AW769321, type: ga Aligns to: chr14:106235439-106235728 (++) All mismatches: ga (90), ga (92), ga (100), ga (102), ga (130), ga (133), ga (158), cg (167), ga (173), ga (176), ga (203), ga (210), ga (212), ga (215), ga (218), ga (229), ga (236), ga (242), ga (248), ga (249), ga (251), ga (257), gt (263), ga (265), ga (272), ga (278), Editing mismatches: 24, all mismatches: 26, alignment length: 290, cluster length: 189, total number of Gs: 66 Locations in RNA: 90 92 100 102 130 133 158 173 176 203 210 212 215 218 229 236 242 248 249 251 257 265 272 278 Locations in genome: 106235527 106235529 106235537 106235539 106235567 106235570 106235595 106235610 106235613 106235640 106235647 106235649 106235652 106235655 106235666 106235673 106235679 106235685 106235686 106235688 106235694 106235702 106235709 106235715 Upstream nucleotide (in genome): c c c a c c a t a c t a a t t t t c g t t a a c Upstream nucleotide summary: a: 7, c: 8, g: 1, t: 8, other: 0 Downstream nucleotide (in genome): c c a a t c a a c g a a a t c c t g t a c g g t Downstream nucleotide summary: a: 8, c: 7, g: 4, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 2, at: 0, ca: 1, cc: 3, cg: 2, ct: 2, ga: 0, gc: 0, gg: 0, gt: 1, ta: 3, tc: 3, tg: 0, tt: 2, other: 0 >chr14:106235439-106235728 (+) tcgcaggggcccagggcagcgctgggtgctttatttccatgctgggtgcccgggaagtatgtacacggggtacgtgccaagcatcctcgcgcgaccccgagagcccggggagcgggggcttgccggccgtcgcactcatttacccggagacagggagaggctcttctgcgtgaagcggttgtgcagagcctcatgcatcacggagcatgagaagatgttcccctgctgccacctgctcttgtccacggtgagcttgctgtagaggaagaaggagccgtcggagtccagca >AW769321:2-291 (+) tcgcaggggcccagggcagcgctgggtgctttatttccatgctgggtgcccgggaagtatgtacacggggtacgtgccaagcatcctcacacgaccccaaaagcccggggagcgggggcttgccggccatcacactcatttacccggagacagggaaaggctcttgtgcgtaaaacggttgtgcagagcctcatgcatcacagagcataaaaaaatattcccctgctaccacctactcttatccacaataagcttactgtataagaagaaagagccatcggantccagca End editing Edited EST: AW770915, type: ga Aligns to: chr14:61112754-61113169 (++) All mismatches: ga (192), gt (198), ga (202), ga (217), ga (230), ga (252), ga (261), ga (269), ga (297), ga (308), ga (323), ga (326), ga (330), ga (332), ga (345), ga (358), ga (364), ga (373), ga (382), ga (386), ga (396), ga (401), ga (410), Editing mismatches: 22, all mismatches: 23, alignment length: 417, cluster length: 218, total number of Gs: 75 Locations in RNA: 192 202 217 230 252 261 269 297 308 323 326 330 332 345 358 364 373 382 386 396 401 410 Locations in genome: 61112945 61112954 61112969 61112982 61113004 61113013 61113021 61113049 61113060 61113075 61113078 61113082 61113084 61113097 61113110 61113116 61113125 61113134 61113138 61113148 61113153 61113162 Upstream nucleotide (in genome): a a a a a a a a t t a c t a c a t g t t t a Upstream nucleotide summary: a: 12, c: 2, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): t t g g g t a t a c g t a g g a a c g c c g Downstream nucleotide summary: a: 5, c: 4, g: 8, t: 5, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 6, at: 4, ca: 0, cc: 0, cg: 1, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 3, tc: 3, tg: 1, tt: 0, other: 0 >chr14:61112754-61113169 (+) cctgatctctgcattgggaaggaaaatgcaaaagtggaaagagttggagagaagaggagattaagcttgagatcgctgttggttttgatttttaaaaagatatttgtgaaagtccaccattcctttatgcgcaaacaactccagaaacaagctgcaaaaatgttcctgatttctatttacaagtgtccctagtcgctg-cagtggttgctgctccaggaatcccttcgaggccccagtccctccccacttaggaccccaagtccaccagactggaggtgagggggccgagcagagagtcttggagctgatgctggtgggtctgcaggccgtgactgggctgcgaggctgttaagcccgggagagaatagtttgagctcctggcgtggcccatattgccctgcagcagaaggaccgag >AW770915:1-417 (+) cctgatctctgcattgggaaggaaaatgcaaaagtggaaagagttggagagaagaggagattaagcttgagatcgctgttggttttgatttttaaaaagatatttgtgaaagtccaccattcctttatgcgcaaacaactccanaaacaagctgcaaaaatgttcctgatttctatttacaantgtccctaatcgctttcaatggttgctgctccaagaatcccttcgaagccccantccctccccacttaagaccccaaatccaccaaactggaggtganggggccnancananaatcttgganctaatgctggtgggtctacaagccataactgggctgcgaagctgttaagcccaggagaaaatagtttaagctcctgacgtagcccatattaccctacagcagaaagaccgag End editing Edited EST: BE046152, type: ga Aligns to: chr14:99439159-99439638 (++) All mismatches: ga (26), ga (77), ga (84), ga (106), ga (133), ga (138), ga (155), ga (157), ga (169), ga (177), ga (192), ga (198), ga (201), ga (210), ga (216), ga (226), ga (228), ga (229), ga (231), ga (235), ga (237), ga (250), ga (251), ga (277), ga (289), ga (306), ga (307), ga (313), ga (323), ga (324), ga (327), ga (330), ag (343), ga (344), ga (345), ga (357), ga (360), ga (361), ga (366), ga (372), ga (381), ga (390), ga (395), ga (404), ga (417), ga (426), tg (427), ga (429), ga (438), ga (441), tg (442), ga (443), ga (446), ga (475), Editing mismatches: 51, all mismatches: 54, alignment length: 479, cluster length: 451, total number of Gs: 106 Locations in RNA: 26 77 84 106 133 138 155 157 169 177 192 198 201 210 216 226 228 229 231 235 237 250 251 277 289 306 307 313 323 324 327 330 344 345 357 360 361 366 372 381 390 395 404 417 426 429 438 441 443 446 475 Locations in genome: 99439184 99439235 99439242 99439264 99439291 99439296 99439313 99439315 99439327 99439335 99439350 99439356 99439359 99439368 99439374 99439384 99439386 99439387 99439389 99439393 99439395 99439408 99439409 99439435 99439447 99439464 99439465 99439471 99439481 99439482 99439486 99439489 99439503 99439504 99439516 99439519 99439520 99439525 99439531 99439540 99439549 99439554 99439563 99439576 99439585 99439588 99439597 99439600 99439602 99439605 99439634 Upstream nucleotide (in genome): a t c t g c g a t a a c c t a t c g a t a t g t t t g a a g t t a g t a g t t t t a t a t t t g t t a Upstream nucleotide summary: a: 14, c: 5, g: 9, t: 23, other: 0 Downstream nucleotide (in genome): a c g a a g a g a g a c c c c c g a g a c g t a g g a c g g a c g t g g c t a c a g g a t a c t a g a Downstream nucleotide summary: a: 17, c: 12, g: 17, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 3, ag: 7, at: 0, ca: 0, cc: 2, cg: 3, ct: 0, ga: 4, gc: 1, gg: 1, gt: 3, ta: 9, tc: 6, tg: 6, tt: 2, other: 0 >chr14:99439159-99439638 (+) ttcagtggaaaataacttttattgagaccccaccaactgcaaaatctgttcctggcattaagctccttcttcctttgcaattcggtctttcttcagtggtcccatgaatgctttcttctcctccatggtctggaagcggccatggccaaacttggaggtggtgtcaatgaacttaaggtcaatcttctccagagcccgccgcttcgtctgcaccagcaaggacttgcggagggtgagcacccgcttcttggttcccaccacacagcctttcagcatgacaaagtcattggtcacttcaccatagtggacaaagccacccagagggttgatgctcttgtcagataggtcatagtcagtggaggcattgttcttgatcagcttgccatccttgataaggtagccctggccaatcttatagatcttcttgttgatctcagtgcggtgatggtagcctt-tctgcccagcgcgtgccacagagaa >BE046152:1-479 (+) ttcagtggaaaataacttttattgaaaccccaccaactgcaaaatctgttcctggcattaanctccttcttcctttacaattcagtctttcttcagtggtcccataaatgctttcttctcctccatggtctgaaancagccatggccaaacttgaaagtggtgtcaataaacttaaagtcaatcttctccaaagcccaccacttcgtctacaccaacaaggacttacaaaaggtaaacacccgcttcttaattcccaccacacagcctttcagcataacaaantcattagtcacttcaccatagtaaacaaaaccacccagaaa-ttaatactcttgtcagatgaatcatagtcantagaaacattattcttaatcagcttaccntccttaataaagtagccctagccaatcttataaatcttcttagtaatctcagtacgagaatagtagccttgtct-cccagcgcgtgccacaaagaa End editing Edited EST: DA105809, type: ag Aligns to: chr15:68482051-68482545 (++) All mismatches: ag (98), ag (113), ag (123), ag (125), ag (132), ag (149), ag (155), ag (161), ag (168), ag (173), ag (174), ag (204), ag (207), ag (210), ag (211), ag (233), ag (239), ag (249), ag (253), ag (254), ag (266), ag (279), ag (283), ag (284), ag (286), ag (290), ag (292), ag (312), ag (325), ag (334), ag (337), ag (349), ag (350), ag (359), ag (372), ag (375), ag (388), ag (397), ag (398), ag (400), ag (404), ag (412), ag (427), ag (437), ag (447), ag (460), ag (471), ag (485), ag (486), ag (496), Editing mismatches: 50, all mismatches: 50, alignment length: 496, cluster length: 398, total number of As: 117 Locations in RNA: 98 113 123 125 132 149 155 161 168 173 174 204 207 210 211 233 239 249 253 254 266 279 283 284 286 290 292 312 325 334 337 349 350 359 372 375 388 397 398 400 404 412 427 437 447 460 471 485 486 496 Locations in genome: 68482148 68482163 68482173 68482175 68482182 68482199 68482205 68482211 68482217 68482222 68482223 68482253 68482256 68482259 68482260 68482282 68482288 68482298 68482302 68482303 68482315 68482328 68482332 68482333 68482335 68482339 68482341 68482361 68482374 68482383 68482386 68482398 68482399 68482408 68482421 68482424 68482437 68482446 68482447 68482449 68482453 68482461 68482476 68482486 68482496 68482509 68482520 68482534 68482535 68482545 Upstream nucleotide (in genome): t a t t c t a t t t a a t t a g t t a a a t t a a a t t t c a t a t t a g g a a t t t t c t a t a a Upstream nucleotide summary: a: 19, c: 3, g: 3, t: 25, other: 0 Downstream nucleotide (in genome): a t t g a g t a c a t t c a a t c g a c t g a a t t g t g g t a c t c a t a a c t c g a g t g a t n Downstream nucleotide summary: a: 15, c: 8, g: 10, t: 16, other: 1 Dinucleotide summary: aa: 5, ac: 3, ag: 1, at: 9, ca: 1, cc: 0, cg: 2, ct: 0, ga: 1, gc: 0, gg: 0, gt: 2, ta: 8, tc: 5, tg: 7, tt: 5, other: 1 >chr15:68482051-68482545 (+) atgtgtattccacacacaaatggctgagttatagtcataaaacaatttgcaataaaaaaaaaaccaaaacagattgtcagttaaccaggaaacagttaatgttttttaatgaatctggcattatagtgagcaaatgtcgtattaatttaggctaatttctaatac-taccataatttgtgtctaaatttctgttggggtagaaattactaaaattgtggggagttttttctgatttttacattgctttaggaaacatttttactaattcagctgtcttaggtaaaatgaatagttttcttcctgtttttttatgtgtcattgttagtggtctcagaattctgatcagtaactttgtgtatgatgctgaattacaaaccgtttgaatgatccagttgaaaacgtatccctctactttcttcagttgtagaaaaggttaatttccctcagtgtcccacattataccaacctaagagaagaacaggtaatagggagaaa >DA105809:1-496 (+) atgtgtattccacacacaaatggctgagttatagtcataaaacaatttgcaataaaaaaaaaaccaaaacagattgtcagttaaccaggaaacagttgatgttttttaatgagtctggcattgtggtgagcgaatgtcgtattaatttgggctagtttctgatacntgccatggtttgtgtctaaatttctgttggggtagaagttgctggaattgtggggagttttttctggtttttgcattgctttgggaggcatttttactagttcagctgtcttgggtggagtgagtggttttcttcctgtttttttgtgtgtcattgttggtggtctcggagttctgatcagtggctttgtgtgtgatgctgaattgcagaccgtttgaatggtccagttgggagcgtgtccctctgctttcttcagttgtggaaaaggttgatttccctcggtgtcccacattgtaccaacctaggagaagaacaggtggtagggagaag End editing Edited EST: DA335143, type: ag Aligns to: chr15:25358328-25358904 (++) All mismatches: ag (508), ag (521), ag (531), ag (539), ag (540), ag (545), ag (546), ag (555), ag (562), ag (563), ag (564), ag (565), ag (570), Editing mismatches: 13, all mismatches: 13, alignment length: 577, cluster length: 63, total number of As: 20 Locations in RNA: 508 521 531 539 540 545 546 555 562 563 564 565 570 Locations in genome: 25358835 25358848 25358858 25358866 25358867 25358872 25358873 25358882 25358889 25358890 25358891 25358892 25358897 Upstream nucleotide (in genome): t c c c a c a a c a a a c Upstream nucleotide summary: a: 6, c: 6, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): g c g a g a c c a a a c t Downstream nucleotide summary: a: 5, c: 4, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 1, at: 0, ca: 3, cc: 1, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr15:25358328-25358904 (+) caaaactacatacactgaaatttaacatgattgaggggatcaataggcaattcaacaataaaagcttttgttcataccctcttcttaatcagtgataagtcaattagatagagcatcattgaggttacaacatacttcagcaatgttgtcaaccaatttgacctgagatagatagatagacagttagacagacagacagacagacagagaaaacttcacccaacaacagaaatacaaattattttcaagcatacctggaacattctccaggatagagtatatgttaggctataaaactgtactcaataaatttaagattgaaaccatgtagagtatgttgtgtgaccatagaggaattagaaatcaacacagaaataaatttggaggtcacaagatatttggaaattaacacactttacagagcccattggtcaaaaatatatatattaaactagaaaggccgggggtggttgcttacacctgtaattccagcactttgggaggcgtaggtgggcacatcacttgaggccaggagttcaagaccaacctgggcaacatggcaaaaccccatctctac >DA335143:1-577 (+) caaaactacatacactgaaatttaacatgattgaggggatcaataggcaattcaacaataaaagcttttgttcataccctcttcttaatcagtgataagtcaattagatagagcatcattgaggttacaacatacttcagcaatgttgtcaaccaatttgacctgagatagatagatagacagttagacagacagacagacagacagagaaaacttcacccaacaacagaaatacaaattattttcaagcatacctggaacattctccaggatagagtatatgttaggctataaaactgtactcaataaatttaagattgaaaccatgtagagtatgttgtgtgaccatagaggaattagaaatcaacacagaaataaatttggaggtcacaagatatttggaaattaacacactttacagagcccattggtcaaaaatatatatattaaactagaaaggccgggggtggttgcttacacctgtaattccagcactttgggaggcgtgggtgggcacatcgcttgaggccgggagttcgggaccggcctgggcagcatggcggggccccgtctctac End editing Edited EST: DW418484, type: ag Aligns to: chr15:42783989-42784396 (++) All mismatches: ag (29), ag (48), ag (163), ag (238), ag (263), ag (279), ag (281), ag (312), ag (321), ag (340), ag (351), ag (358), ag (360), ag (372), ag (373), ag (374), ag (377), ag (385), ag (400), ag (412), ct (413), Editing mismatches: 20, all mismatches: 21, alignment length: 408, cluster length: 384, total number of As: 81 Locations in RNA: 29 48 163 238 263 279 281 312 321 340 351 358 360 372 373 374 377 385 400 412 Locations in genome: 42784000 42784019 42784134 42784209 42784234 42784250 42784252 42784283 42784292 42784311 42784322 42784329 42784331 42784343 42784344 42784345 42784348 42784356 42784371 42784383 Upstream nucleotide (in genome): c g g a c c g t t t c c a c a a g c a t Upstream nucleotide summary: a: 5, c: 7, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): a t g g a g c t g t g a c a a t t c g c Downstream nucleotide summary: a: 5, c: 4, g: 6, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 1, ca: 4, cc: 1, cg: 2, ct: 0, ga: 0, gc: 1, gg: 1, gt: 2, ta: 0, tc: 1, tg: 1, tt: 2, other: 0 >chr15:42783989-42784396 (+) aggctggtctcaaactcctcggctcaagtgatctgcctgccttggccttccaaagttctgggattgcaggtgtcagccaccgcgcccagcctacatttattatttatttatttagttagttagttagttagttattttgagatggagtcttgctctgtcgttcaggctgtagtgcagaaccgctctcttggttcactgcaacctccaccttccgggttcaagcgataatcctgcctcagcctcccaagtagctggaattacagacgtgcactaccacgcccaactaatttttgtatttttagtagagatggggtttcgccatattggccaggcaggtctcaaactcctgacttcaaatgatccgcccacctcggcttccctaagtgctggtattacaggtgtgagcca >DW418484:18-425 (+) aggctggtctcgaactcctcggctcaagtggtctgcctgccttggccttccaaagttctgggattgcaggtgtcagccaccgcgcccagcctacatttattatttatttatttagttagttagttagttagttattttgagatggggtcttgctctgtcgttcaggctgtagtgcagaaccgctctcttggttcactgcaacctccaccttccgggttcaggcgataatcctgcctcagcctcccgagtagctggaattacgggcgtgcactaccacgcccaactaatttttgtgtttttagtggagatggggtttcgccatgttggccaggcgggtctcgagctcctgacttcgggtggtccgcccgcctcggcttccctaggtgctggtattgtaggtgtgagcca End editing Edited EST: DW424039, type: ag Aligns to: chr15:50661981-50662257 (++) All mismatches: ag (14), ag (15), ag (16), ag (60), ag (61), ag (66), ag (69), ag (82), ag (83), ag (87), ag (96), ag (101), ag (106), ag (114), ag (115), ag (129), ag (130), ag (132), ag (137), ag (140), ag (151), ag (162), ag (170), ag (196), ag (197), ag (210), ag (211), ag (226), ag (231), ag (239), ag (274), Editing mismatches: 31, all mismatches: 31, alignment length: 277, cluster length: 261, total number of As: 83 Locations in RNA: 14 15 16 60 61 66 69 82 83 87 96 101 106 114 115 129 130 132 137 140 151 162 170 196 197 210 211 226 231 239 274 Locations in genome: 50661981 50661982 50661983 50662027 50662028 50662033 50662036 50662049 50662050 50662054 50662063 50662068 50662073 50662081 50662082 50662096 50662097 50662099 50662104 50662107 50662118 50662129 50662137 50662163 50662164 50662177 50662178 50662193 50662198 50662206 50662241 Upstream nucleotide (in genome): n a a t a c c c a c c g c c a c a c c a t c t t a c a a a g c Upstream nucleotide summary: a: 11, c: 13, g: 2, t: 4, other: 1 Downstream nucleotide (in genome): a a a a g g c a g g c g g a g a c t a g c a g a t a g g t a c Downstream nucleotide summary: a: 12, c: 5, g: 11, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 6, at: 2, ca: 6, cc: 3, cg: 3, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 1 >chr15:50661981-50662257 (+) aaaagaaaaaagaaatcagaggctgggcatagtggctcatgcctataagcccagcactttgggaggccaaggcaggtggatcacttgaggccaggagttcaagaccagcctgggcaacatggcaaaagcctatctctactagagatacaaaagattagctggacgtgatggtgtgtgcctgtaatcccagctactcaagaggctgaggcacaagagaattgcttgaacacaggaggtggaggttgcagtgagccaagatcacgccactgcactccaa >DW424039:14-290 (+) gggagaaaaaagaaatcagaggctgggcatagtggctcatgcctatgggcccggcgctttgggaggccggggcgggtggatcgcttggggccgggagttcgggaccagcctgggcggcgtggcgaaggcctatctctgctagagatacgaaagattggctggacgtgatggtgtgtgcctgtggtcccagctactcgggaggctgaggcacaggagagttgcttggacacaggaggtggaggttgcagtgagccaagatcgcgccactgcactccaa End editing Edited EST: DW426616, type: ag Aligns to: chr15:42086190-42086451 (++) All mismatches: ag (14), ag (15), ag (38), ag (46), ag (47), ag (49), ag (52), ag (62), ag (90), ag (94), ag (97), ag (99), ag (103), ag (107), ag (129), ag (130), ag (139), ag (156), gc (160), ag (162), ag (171), ag (182), ag (195), Editing mismatches: 22, all mismatches: 23, alignment length: 262, cluster length: 182, total number of As: 52 Locations in RNA: 14 15 38 46 47 49 52 62 90 94 97 99 103 107 129 130 139 156 162 171 182 195 Locations in genome: 42086194 42086195 42086218 42086226 42086227 42086229 42086232 42086242 42086270 42086274 42086277 42086279 42086283 42086287 42086309 42086310 42086319 42086336 42086342 42086351 42086362 42086375 Upstream nucleotide (in genome): c a c t a g c a a t a a t c t a t c a a c g Upstream nucleotide summary: a: 9, c: 6, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): a g g a g c g c a c a a g g a t c g t c g g Downstream nucleotide summary: a: 6, c: 5, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 2, at: 2, ca: 1, cc: 0, cg: 5, ct: 0, ga: 0, gc: 1, gg: 1, gt: 0, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr15:42086190-42086451 (+) ggccaaggtgggtggattgcttgaggtcaggagtttaagaccagcctgggcaacatggtgaaacctcatctccccactaaaaatacaaaaattagccagacacgatggtgggtgcctgtaatcctagctactcgggaggctgaggcagcagaatcgcttgaaccctggaggcagagattgcagtgagctgagatcaccccactgcactccagcctgggtgacagagcaagacttgtctcaaaacagcaacaacaacaaacca >DW426616:10-271 (+) ggccggggtgggtggattgcttgaggtcgggagtttggggccggcctgggcagcatggtgaaacctcatctccccactaagaatgcagagattggccggacacgatggtgggtgcctgtggtcctagctgctcgggaggctgaggcggcacagtcgcttgagccctggaggcggagattgcagtgggctgagatcaccccactgcactccagcctgggtgacagagcaagacttgtctcaaaacagcaacaacaacaaacca End editing Edited EST: DW427706, type: ag Aligns to: chr15:91115112-91115373 (++) All mismatches: ag (27), ag (35), ag (37), ag (43), ag (44), ag (52), ag (70), ag (89), ag (98), ag (113), ag (128), ag (134), ag (141), ag (143), ag (146), ag (149), ag (152), ag (178), ag (179), ag (184), ag (188), ag (201), ag (205), ag (208), ag (219), ag (224), ag (225), ag (244), ag (248), ag (249), Editing mismatches: 30, all mismatches: 30, alignment length: 262, cluster length: 223, total number of As: 58 Locations in RNA: 27 35 37 43 44 52 70 89 98 113 128 134 141 143 146 149 152 178 179 184 188 201 205 208 219 224 225 244 248 249 Locations in genome: 91115122 91115130 91115132 91115138 91115139 91115147 91115165 91115184 91115193 91115208 91115223 91115229 91115236 91115238 91115241 91115244 91115247 91115273 91115274 91115279 91115283 91115296 91115300 91115303 91115314 91115319 91115320 91115339 91115343 91115344 Upstream nucleotide (in genome): c c c t a c c c a a c t a t a a t t a c t g c g g c a g c a Upstream nucleotide summary: a: 9, c: 11, g: 4, t: 6, other: 0 Downstream nucleotide (in genome): g c c a t c g g g c t c t c a t g a t g c g g g g a g g a g Downstream nucleotide summary: a: 5, c: 7, g: 13, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 3, at: 4, ca: 2, cc: 3, cg: 5, ct: 1, ga: 0, gc: 0, gg: 4, gt: 0, ta: 2, tc: 3, tg: 1, tt: 0, other: 0 >chr15:91115112-91115373 (+) gactgggtgcagtggctcacacctgtaatcccagcactttgggaggccgaggcaggtggattacctgaggtcaggagttcaagaccagcctggccaacatggtgaaatcccatctctactgaaaatacaaaaattagctgggcatggtggtgtgtgcctgtaatcccagctacttgggaggctgaggcaggagaattgcctgagcccaagaggcggaggttgcagtgagccaagattgcgccatcgtactccagcgtggctg >DW427706:17-278 (+) gactgggtgcggtggctcgcgcctgtggtcccagcgctttgggaggccgaggcgggtggattacctgaggtcgggagttcaggaccagcctggccagcatggtgaaatcccgtctctgctgaaagtgcagaagttggctgggcatggtggtgtgtgcctgtggtcccggctgcttgggaggctggggcgggggaattgcctgggcccgggaggcggaggttgcagtgggccgggattgcgccatcgtactccagcgtggctg End editing Edited EST: DW432077, type: ag Aligns to: chr15:50661981-50662234 (++) All mismatches: ag (14), ag (15), ag (16), ag (60), ag (61), ag (66), ag (69), ag (82), ag (83), ag (87), ag (96), ag (101), ag (106), ag (114), ag (115), ag (129), ag (130), ag (132), ag (137), ag (140), ag (151), ag (162), ag (170), ag (196), ag (197), ag (210), ag (211), ag (226), ag (231), ag (239), Editing mismatches: 30, all mismatches: 30, alignment length: 254, cluster length: 226, total number of As: 72 Locations in RNA: 14 15 16 60 61 66 69 82 83 87 96 101 106 114 115 129 130 132 137 140 151 162 170 196 197 210 211 226 231 239 Locations in genome: 50661981 50661982 50661983 50662027 50662028 50662033 50662036 50662049 50662050 50662054 50662063 50662068 50662073 50662081 50662082 50662096 50662097 50662099 50662104 50662107 50662118 50662129 50662137 50662163 50662164 50662177 50662178 50662193 50662198 50662206 Upstream nucleotide (in genome): n a a t a c c c a c c g c c a c a c c a t c t t a c a a a g Upstream nucleotide summary: a: 11, c: 12, g: 2, t: 4, other: 1 Downstream nucleotide (in genome): a a a a g g c a g g c g g a g a c t a g c a g a t a g g t a Downstream nucleotide summary: a: 12, c: 4, g: 11, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 6, at: 2, ca: 6, cc: 2, cg: 3, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 1 >chr15:50661981-50662234 (+) aaaagaaaaaagaaatcagaggctgggcatagtggctcatgcctataagcccagcactttgggaggccaaggcaggtggatcacttgaggccaggagttcaagaccagcctgggcaacatggcaaaagcctatctctactagagatacaaaagattagctggacgtgatggtgtgtgcctgtaatcccagctactcaagaggctgaggcacaagagaattgcttgaacacaggaggtggaggttgcagtgagcc >DW432077:14-267 (+) gggagaaaaaagaaatcagaggctgggcatagtggctcatgcctatgggcccggcgctttgggaggccggggcgggtggatcgcttggggccgggagttcgggaccagcctgggcggcgtggcgaaggcctatctctgctagagatacgaaagattggctggacgtgatggtgtgtgcctgtggtcccagctactcgggaggctgaggcacaggagagttgcttggacacaggaggtggaggttgcagtgagcc End editing Edited EST: DW433684, type: ag Aligns to: chr15:94937041-94937294 (++) All mismatches: ag (14), ag (36), ag (39), ag (50), ag (70), ag (84), ag (85), ag (87), ag (90), ag (94), ag (95), ag (99), ag (125), ag (126), ag (135), ag (152), ag (158), ag (161), ag (166), ag (167), ag (171), ag (247), ac (248), ag (249), Editing mismatches: 23, all mismatches: 24, alignment length: 252, cluster length: 237, total number of As: 64 Locations in RNA: 14 36 39 50 70 84 85 87 90 94 95 99 125 126 135 152 158 161 166 167 171 247 249 Locations in genome: 94937046 94937069 94937072 94937083 94937103 94937117 94937118 94937120 94937123 94937127 94937128 94937132 94937158 94937159 94937168 94937185 94937191 94937194 94937199 94937200 94937204 94937280 94937282 Upstream nucleotide (in genome): a c g c a t a a t a a t t a t c a c g a c a a Upstream nucleotide summary: a: 11, c: 5, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): g g g g c a a a c a a g a t c g t c a c g a a Downstream nucleotide summary: a: 9, c: 5, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 6, ac: 2, ag: 1, at: 2, ca: 0, cc: 1, cg: 4, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr15:94937041-94937294 (+) ggccaaggtgggtggatcacctgaggtcaggagtttgaggccagcctgggcaacatggtgaaaccttgtctctactaaaaatacaaaaattagctgggcgtggtggcgtgcttctgtaatcccagctactcaggaggctgaggcaggacaatcacttgaactcaggaggcggaggttgtggtgagccaagactgcaccatggcactccagcctgggcaatagagcagaactccatctcaaaaaaaaaaaaaaaa >DW433684:10-261 (+) ggcc-ggg-gggtggatcacctgaggtcgggggtttgaggccggcctgggcaacatggtgaagccttgtctctactggagatgcaaggattggctgggcgtggtggcgtgcttctgtggtcccagctgctcaggaggctgaggcgggacagtcgcttgggctcgggaggcggaggttgtggtgagccaagactgcaccatggcactccagcctgggcaatagagcagaactccatctcagcgaaaaaaaaaaaa End editing Edited EST: DW436870, type: ag Aligns to: chr15:50659435-50659676 (++) All mismatches: ag (10), ag (15), ag (16), ag (21), ag (25), ag (40), ag (43), ag (48), ag (49), ag (54), ag (64), ag (74), ag (89), ag (97), ag (98), ag (103), ag (111), ag (119), ag (130), ag (143), ag (156), ag (170), ag (171), ag (234), ga (239), tg (246), Editing mismatches: 24, all mismatches: 26, alignment length: 242, cluster length: 224, total number of As: 67 Locations in RNA: 10 15 16 21 25 40 43 48 49 54 64 74 89 97 98 103 111 119 130 143 156 170 171 234 Locations in genome: 50659435 50659439 50659440 50659445 50659449 50659464 50659467 50659472 50659473 50659478 50659488 50659498 50659513 50659521 50659522 50659527 50659535 50659543 50659554 50659567 50659580 50659594 50659595 50659658 Upstream nucleotide (in genome): n c a c c c g c a c a a a a a t c c a c c g a g Upstream nucleotide summary: a: 9, c: 10, g: 3, t: 1, other: 1 Downstream nucleotide (in genome): g a a g g g g a g g c c a a a g t g t g g a c g Downstream nucleotide summary: a: 7, c: 3, g: 12, t: 2, other: 0 Dinucleotide summary: aa: 4, ac: 3, ag: 1, at: 1, ca: 2, cc: 0, cg: 7, ct: 1, ga: 1, gc: 0, gg: 2, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 1 >chr15:50659435-50659676 (+) agcc-aaaggcaggcagatcacctgaggtcaggagttcaagaccagccttgccaacatggtgaaaccctgtctctactaaaaatacaaaaattagcagagcatggtggcaggcgcctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacccgggaggcggagtttgcagtgagccaagatagtgccatcgcactccagcctggacaacagagcgagactccatctaaaa >DW436870:10-251 (+) ggccgggaggcgggcggatcacctgaggtcgggggttcgggaccggccttgccagcatggtgaagccctgtctctactagaaatacaggaattggcagagcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcgggagaattgcttgggcccgggaggcggagtttgcagtgagccaagatagtgccatcgcactccagcctggacaacagggcgaaactccagc-aaaa End editing Edited EST: BM709298, type: ag Aligns to: chr15:50708360-50708804 (++) All mismatches: ag (236), ag (251), ag (255), ag (276), ag (291), ag (309), ag (321), ag (335), ag (338), ag (339), ag (345), ag (348), ag (354), ag (400), Editing mismatches: 14, all mismatches: 14, alignment length: 444, cluster length: 164, total number of As: 35 Locations in RNA: 236 251 255 276 291 309 321 335 338 339 345 348 354 400 Locations in genome: 50708597 50708612 50708616 50708637 50708652 50708670 50708682 50708696 50708699 50708700 50708706 50708709 50708715 50708760 Upstream nucleotide (in genome): a c c a c a c a t a g t c t Upstream nucleotide summary: a: 5, c: 5, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): a c g t g g c g a c c c t g Downstream nucleotide summary: a: 2, c: 5, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 1, ca: 0, cc: 2, cg: 2, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr15:50708360-50708804 (+) gcttcagccaatcatagagccaactaccagccaatgacaaacagccagccagctgttagttatataactagggactttcactggatcatacctaagcaaggcaaatgcctagctgtagccaatgaagtaacttctttacttttgcctccatgttcagcctataagcatgctgctgctcatgctgttaaagtggagctctctgaagttattcttttttttttttttttttttgagacaaagtcttgtgctgtcacccaggctggagggcagtggcacaatcacacctcactgcagacttgacccgggtccaagccatcctcccacctcagcctcccaagtaactgggactacaggcatgcaccaccatgctgggctattttttttttttt-aactttttggtagagacaaggtctcaccatgttgcctaggctcgttttgaattcct >BM709298:1-444 (+) gcttcagccaatcatagagccaactaccagccaatgacaaacagccagccagctgttagttatataactagggactttcactggatcatacctaagcaaggcaaatgcctagctgtagccaatgaagtaacttctttacttttgcctccatgttcagcctataagcatgctgctgctcatgctgttaaagtggagctctctgaagttattc--ttttttttttttttttttgagacagagtcttgtgctgtcgcccgggctggagggcagtggcacagtcacacctcactgcggacttgacccgggtccaggccatcctcccgcctcagcctcccaggtggctggggctgcaggcgtgcaccaccatgctgggctattttttttttttttaactttttggtggagacaaggtctcaccatgttgcctaggctcgttttgaattcct End editing Edited EST: AI003929, type: ag Aligns to: chr15:83673390-83673807 (++) All mismatches: ag (6), ag (7), ag (8), ag (9), ag (13), ag (15), ag (16), ag (20), ag (22), ag (26), ag (27), ag (30), ag (32), ag (33), ag (40), ag (87), ag (116), ag (122), ag (127), ag (129), ag (130), ag (134), ag (139), ag (142), ag (145), ag (148), ag (152), ag (157), ag (158), ag (160), ag (172), ag (178), ag (179), ag (180), ag (185), ag (190), ag (195), ag (196), ag (202), ag (204), ag (205), ag (213), ag (223), ag (343), ga (344), ag (346), Editing mismatches: 45, all mismatches: 46, alignment length: 418, cluster length: 342, total number of As: 126 Locations in RNA: 6 7 8 9 13 15 16 20 22 26 27 30 32 33 40 87 116 122 127 129 130 134 139 142 145 148 152 157 158 160 172 178 179 180 185 190 195 196 202 204 205 213 223 343 346 Locations in genome: 83673395 83673396 83673397 83673398 83673402 83673404 83673405 83673409 83673411 83673415 83673416 83673419 83673421 83673422 83673429 83673476 83673506 83673512 83673517 83673519 83673520 83673524 83673529 83673532 83673535 83673538 83673542 83673547 83673548 83673550 83673562 83673568 83673569 83673570 83673575 83673580 83673585 83673586 83673592 83673594 83673595 83673603 83673613 83673733 83673736 Upstream nucleotide (in genome): c a a a t t a c c t a t c a g g a c a a a t t g t a c t a c c t a a g g c a c g a a g t g Upstream nucleotide summary: a: 17, c: 10, g: 8, t: 10, other: 0 Downstream nucleotide (in genome): a a a a t a t c t a t c a g t t t t a a t a a c c a g a c g c a a c t a a t g a t c g g a Downstream nucleotide summary: a: 19, c: 8, g: 6, t: 12, other: 0 Dinucleotide summary: aa: 7, ac: 3, ag: 1, at: 6, ca: 3, cc: 2, cg: 3, ct: 2, ga: 3, gc: 1, gg: 1, gt: 3, ta: 6, tc: 2, tg: 1, tt: 1, other: 0 >chr15:83673390-83673807 (+) ttctcaaaaattataattcacatttaattacaagtcatgatttttctttactttttcaacaaaatggtaaatatagtctttaaaagatgtaaaaaaaaaattttttttacatttaaataagcatttaaaaatctaaggtaagactacaaagcagcataacaggttttctgtcacttgtaaactggattagaaggcaatccccagaattccagaaccgttgtggagatatgatttttaatttacaatctagaaaaactgcattcaacaagtagtccaaggatttgggttctagttgccagcttgcatggtacaatcttgagtaagtctctcaacttctggatataggaaa-tcaaaggccccccaacagaatgaaaggtgttaaatcaggtcatcttgaatattcttcccagctctgtta >AI003929:1-418 (+) ttctcggggattgtggttcgcgtttggttgcgggtcatggtttttctttactttttcaacaaaatggtaaatatagtctttaaaaggtgt-aaaaaaaaattttttttacatttaagtaagcgtttagaggtctgaggtgaggctgcagagcggcatggcgggttttctgtcgcttgtgggctgggttaggaggcggtccccggggttccagagccgttgtggggatatgatttttaatttacaatctagaaaaactgcattcaacaagtagtccaaggatttgggttctagttgccagcttgcatggtacaatcttgagtaagtctctcaacttctggatatgaggaaatcaaaggccccccaacagaatgaaaggtgttaaatcaggtcatcttgaatattcttcccagctctgtta End editing Edited EST: W92482, type: ag Aligns to: chr16:75784823-75785254 (++) All mismatches: ag (44), ag (46), ag (47), ag (71), ag (77), ag (105), ag (108), ag (116), ag (117), ag (118), ag (120), ag (130), ag (156), ag (171), ag (174), ag (191), ag (200), ag (211), ag (236), ga (310), ag (357), Editing mismatches: 20, all mismatches: 21, alignment length: 435, cluster length: 313, total number of As: 74 Locations in RNA: 44 46 47 71 77 105 108 116 117 118 120 130 156 171 174 191 200 211 236 357 Locations in genome: 75784866 75784868 75784869 75784893 75784899 75784927 75784930 75784938 75784939 75784940 75784942 75784952 75784978 75784993 75784996 75785013 75785022 75785033 75785058 75785178 Upstream nucleotide (in genome): t c a a c c c c a a t t t t t a c c c t Upstream nucleotide summary: a: 5, c: 8, g: 0, t: 7, other: 0 Downstream nucleotide (in genome): c a t c c t g a a t g c a g g t g a c t Downstream nucleotide summary: a: 5, c: 5, g: 5, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 3, ca: 3, cc: 2, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 3, tt: 1, other: 0 >chr16:75784823-75785254 (+) gttttttgagattaagtcttacttttgtcgctcaggctggagtacaatggcatgatctcggctcactgcaacctccacctcgtgggttcaagcgattctcctgcatcagcctcccaaataggtgggattacaggtgcccgccaccatgcctggctaatttttgtatttttagtagagacggggtttcacaatgttggccaggctggtctcaaactcctgacgttgtgatctgcccaccttggcctcccaaagtgctggtattacagatgtgagccactgaaatgtcttttatatgtattatataaattag-tgcatgattaaatatattccagttgttgggaaatagggccccttta-tt-ggaaaaagaagatacagatatgaaagagggaagagagcaccagtcccagggtattgactggaattagggttatt >W92482:1-435 (+) gttttttgagattaagtcttacttttgtcgctcaggctggagtgcggtggcatgatctcggctcactgcagcctccgcctcgtgggttcaagcgattctcctgcgtcggcctcccgggtgggtgggattgcaggtgcccgccaccatgcctggctgatttttgtatttttggtggagacggggtttcacagtgttggccgggctggtctcgaactcctgacgttgtgatctgcccgccttggcctcccaaagtgctggtattacagatgtgagccactgaaatgtcttttatatgtattatataaattaagtgcatgattaaatatattccagttgttgggaaatagggcccctttgattnggaaaaagaagatacagatatgaaagagggaagagagcaccagtcccagggtattgactggaattagggttatt End editing Edited EST: DA948105, type: ag Aligns to: chr16:75085726-75086248 (++) All mismatches: tc (14), ag (323), ag (339), ag (359), ag (363), ag (366), ag (417), ag (423), ag (424), ag (425), ag (454), ag (485), ag (495), ag (500), ag (507), Editing mismatches: 14, all mismatches: 15, alignment length: 524, cluster length: 185, total number of As: 50 Locations in RNA: 323 339 359 363 366 417 423 424 425 454 485 495 500 507 Locations in genome: 75086047 75086063 75086083 75086087 75086090 75086141 75086147 75086148 75086149 75086178 75086209 75086219 75086224 75086231 Upstream nucleotide (in genome): c c a c a t a a a t a g c c Upstream nucleotide summary: a: 6, c: 5, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g a c g g c a a t g a g g g Downstream nucleotide summary: a: 4, c: 2, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 1, ca: 1, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr16:75085726-75086248 (+) aactatgtttgtttaatcatcacaaatctattcatctatccactcctttatttatctatccacctcttattttgtacacatttcaaagtaaactatagacatctgtatacttatctttaaatatttcaatatgtacatcattaac-tggtgttaagtatttctttatagcttttcctcttggtggaaagtttacatacaaagaaatgtacacattttaagtacatgttcactgggttttgacaagtacatgcatcagcaaaacccaaaaccctatcaagatagagaatgtgcccgggcgtggtggctcacgcctgtttttccagcactttgggaggccaaggctggaggattgcttgaacccagaagttcgagaccaacttgggcaacatggtgaaaccccatctctaccaaaaatacataaaaattacctgggtgtggtggcgtgcacctgtagtctcagctgcttgggaggctgaggtgggaaaattgcttgagcccaggaggcagaggttgcagtgagcca >DA948105:1-524 (+) aactatgtttgttcaatcatcacaaatctattcatctatccactcctttatttatctatccacctcttattttgtacacatttcaaagtaaactatagacatctgtatacttatctttaaatatttcaatatgtacatcattaacntggtgttaagtatttctttatagcttttcctcttggtggaaagtttacatacaaagaaatgtacacattttaagtacatgttcactgggttttgacaagtacatgcatcagcaaaacccaaaaccctatcaagatagagaatgtgcccgggcgtggtggctcacgcctgtttttccggcactttgggaggccgaggctggaggattgcttgagcccggaggttcgagaccaacttgggcaacatggtgaaaccccatctctaccaaaaatgcataagggttacctgggtgtggtggcgtgcacctgtggtctcagctgcttgggaggctgaggtgggagaattgcttgggcccgggaggcggaggttgcagtgagcca End editing Edited EST: DB085374, type: ag Aligns to: chr16:89983510-89983889 (++) All mismatches: ag (172), ag (187), ct (194), ag (198), ga (211), ag (212), ag (220), ag (226), ag (229), ag (231), ag (246), ag (248), ag (251), ag (256), ag (275), ag (296), ag (305), ag (306), ag (313), ag (346), ag (349), ag (370), ag (404), ag (411), ag (412), ag (422), ag (427), ag (428), ag (475), ag (481), ag (488), ag (516), ag (519), ag (545), Editing mismatches: 32, all mismatches: 34, alignment length: 380, cluster length: 374, total number of As: 77 Locations in RNA: 172 187 198 212 220 226 229 231 246 248 251 256 275 296 305 306 313 346 349 370 404 411 412 422 427 428 475 481 488 516 519 545 Locations in genome: 89983515 89983530 89983541 89983555 89983563 89983569 89983572 89983574 89983589 89983591 89983594 89983599 89983618 89983639 89983648 89983649 89983656 89983689 89983692 89983713 89983747 89983754 89983755 89983765 89983770 89983771 89983818 89983824 89983831 89983859 89983862 89983888 Upstream nucleotide (in genome): a t c g t t t g c t t a g c a a g t t c a c a c c a t c c t t c Upstream nucleotide summary: a: 7, c: 10, g: 4, t: 11, other: 0 Downstream nucleotide (in genome): g g c t t g g g t t c g c g a g g a a g t a t c a c c c c g g g Downstream nucleotide summary: a: 5, c: 8, g: 13, t: 6, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 3, at: 2, ca: 2, cc: 4, cg: 3, ct: 1, ga: 0, gc: 1, gg: 2, gt: 1, ta: 2, tc: 2, tg: 5, tt: 2, other: 0 >chr16:89983510-89983889 (+) tcccaagtagctgggattataggcgtgcgccaccacgcctggctgatttttgtatttttagtagagatggagtttcaccatattacccaagctggtcttgaactcctgacctcatgatccgcctgcctcagcctcccaaagtgctgagattataggggtgagccactgtgcccggcaataataattttttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatggtgcaatctcggctcacggcaacctccgcctctcatgttcaagctattatcctgactcagctgggattacaggcacccaccaccacacctggctgattttggtatttttagtagagacggggtttctccatgtcggccag >DB085374:167-546 (+) tcccaggtagctgggattatgggcgtgtgccgccacgcctggctagtttttgtgtttttggtggggatggagtttcaccgtgttgcccaggctggtcttgaactcctggcctcatgatccgcctgcctcggcctcccagggtgctgggattataggggtgagccactgtgcccggcaatgatgattttttttttttttgagacggagttttgctcttgttgcccaggctggagtgcagtggtgcggtctcggctcgcggcggcctccgcctctcatgttcaagctattatcctgactcagctgggattgcaggcgcccaccgccacacctggctgattttggtatttttggtggagacggggtttctccatgtcggccgg End editing Edited EST: DW408299, type: ag Aligns to: chr16:12300935-12301253 (++) All mismatches: ag (69), ag (74), ag (88), ag (91), ag (98), ag (107), ag (108), ag (109), ag (122), ag (131), ag (132), ag (137), ag (152), ag (155), ag (156), ag (161), ag (177), ag (187), ag (188), ag (197), ag (229), ag (236), ag (240), ag (273), ag (283), ta (311), ta (316), Editing mismatches: 25, all mismatches: 27, alignment length: 317, cluster length: 215, total number of As: 63 Locations in RNA: 69 74 88 91 98 107 108 109 122 131 132 137 152 155 156 161 177 187 188 197 229 236 240 273 283 Locations in genome: 12300987 12300992 12301006 12301009 12301016 12301025 12301026 12301027 12301040 12301049 12301050 12301055 12301070 12301073 12301074 12301079 12301095 12301105 12301106 12301115 12301147 12301154 12301158 12301191 12301201 Upstream nucleotide (in genome): g c c c c a a a a a a c t a a t c t a t a g c c t Upstream nucleotide summary: a: 10, c: 8, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): g a c g g a a c c a c t c a a g g a t c c g g c g Downstream nucleotide summary: a: 7, c: 8, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 5, ac: 4, ag: 0, at: 1, ca: 1, cc: 2, cg: 4, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr16:12300935-12301253 (+) gggaggctaggccaagcgcggttgctcacgcctgtaatcccagcatttcgggaggccaagacgggtggatcaccagaggtcaggagttcaaaaccagccagaccaacatggtgaaaccccatctctactaaaaatacaaaaattagctaggtgtggtggcaggcgcctgtaatcctagttacttgggaggctgaggcaggagaattgcttgaacctgggaggcagaggctgcagtgagccaagatcgcaccacttcactccggcctaggtgaaagagtgaaactttgtcaaaaaataaaata-aaataaaaaacaaaaac >DW408299:17-333 (+) gggaggctaggccaagcgcggttgctcacgcctgtaatcccagcatttcggggggccgagacgggtggatcgccggaggtcgggagttcagggccagccagaccagcatggtgaggccccgtctctactaaaaatgcaggaattggctaggtgtggtggcgggcgcctgtggtcctagttgcttgggaggctgaggcaggagaattgcttgagcctggggggcggaggctgcagtgagccaagatcgcaccacttcgctccggcctgngtgaaagagtgaaactttg-caaaaaaaaaaaaacaaa-aaaaaa-aaaaac End editing Edited EST: DW410928, type: ag Aligns to: chr16:19081733-19082047 (++) All mismatches: ag (83), ag (89), ag (92), ag (101), ag (189), ag (193), ag (201), ag (209), ag (219), ag (251), ag (253), ag (263), ag (285), ag (291), ag (302), ag (306), ag (307), ag (314), Editing mismatches: 18, all mismatches: 18, alignment length: 315, cluster length: 232, total number of As: 62 Locations in RNA: 83 89 92 101 189 193 201 209 219 251 253 263 285 291 302 306 307 314 Locations in genome: 19081799 19081805 19081808 19081817 19081905 19081909 19081917 19081925 19081935 19081967 19081969 19081979 19082001 19082007 19082018 19082022 19082023 19082030 Upstream nucleotide (in genome): t c c a a t c c t t g a a g g c a c Upstream nucleotide summary: a: 5, c: 6, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): a g c g t g t c g g g g g g g a g c Downstream nucleotide summary: a: 2, c: 3, g: 11, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 4, at: 1, ca: 1, cc: 3, cg: 1, ct: 1, ga: 0, gc: 0, gg: 3, gt: 0, ta: 1, tc: 0, tg: 3, tt: 0, other: 0 >chr16:19081733-19082047 (+) ggctaagagccctaaaacattacaaagtgataccaatgctggctgggcatggtggctcacgcctgtaatcccagcactttgggaagccaaggtgggaggattgcttgagctcaggagttcgagaccagcctgggcaacatggtgaaaccccgtctctactaaaaatataaaaatgtagctgggcatggtggcacctgcctgtagtcctagctactctggagtcctagctgctctagaggctgaaaaaggagaattgcctgagtctgaaaggtggagtttgcggtgagccaagatcgcacctctgtctccagcctg >DW410928:17-331 (+) ggctaagagccctaaaacattacaaagtgataccaatgctggctgggcatggtggctcacgcctgtgatcccggcgctttgggaggccaaggtgggaggattgcttgagctcaggagttcgagaccagcctgggcaacatggtgaaaccccgtctctactaaaaatataaaagtgtggctgggcgtggtggcgcctgcctgtggtcctagctactctggagtcctagctgctctgggggctgaaaagggagaattgcctgagtctgaagggtggggtttgcggtgggccgggatcgcgcctctgtctccagcctg End editing Edited EST: DW413002, type: ag Aligns to: chr16:70157960-70158261 (++) All mismatches: ag (52), ag (77), ag (90), ag (123), ag (138), ag (177), ag (196), ag (203), ag (204), ag (213), ag (217), ag (236), ag (244), ag (245), ag (256), ag (258), ag (273), ca (288), ag (303), ag (306), Editing mismatches: 19, all mismatches: 20, alignment length: 302, cluster length: 255, total number of As: 63 Locations in RNA: 52 77 90 123 138 177 196 203 204 213 217 236 244 245 256 258 273 303 306 Locations in genome: 70157994 70158019 70158032 70158065 70158080 70158119 70158138 70158145 70158146 70158155 70158159 70158178 70158186 70158187 70158198 70158200 70158215 70158245 70158248 Upstream nucleotide (in genome): c g c a a t a t a t c a g a c g c c c Upstream nucleotide summary: a: 6, c: 7, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): g c a g c g g a t c g t a c g g a a g Downstream nucleotide summary: a: 5, c: 4, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 2, at: 2, ca: 3, cc: 0, cg: 4, ct: 0, ga: 1, gc: 1, gg: 1, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr16:70157960-70158261 (+) aaaaaaaaaaaaaaattatgcctcggccaagtgcagtggctcatgcctgttatcccacgactttgggaggccaaggtgggtggatcacctgaggtcgggagttcaagaccagcctgcccaacatggggaaaccccgtctctactaaaaatgcaaaaattagctgggcgtggtggcataagcctgtaattgtagctactcaggaggctgaggcaggagaattgcttgaacctgggaggcagagattgcagtgagccaagtttgtgccactgccctccagcctgggcaacagagtgagactgtc >DW413002:18-319 (+) aaaaaaaaaaaaaaattatgcctcggccaagtgcggtggctcatgcctgttatcccacggctttgggaggccgaggtgggtggatcacctgaggtcgggagttcaggaccagcctgcccagcatggggaaaccccgtctctactaaaaatgcaaaaattggctgggcgtggtggcataggcctgtggttgtagctgctcgggaggctgaggcaggagagttgcttgggcctgggaggcggggattgcagtgagccgagtttgtgccactgacctccagcctgggcgacggagtgagactgtc End editing Edited EST: DW417497, type: ag Aligns to: chr16:87429783-87430072 (++) All mismatches: ag (22), ag (60), ag (61), ag (67), ag (77), ag (98), ag (99), ag (104), ag (107), ag (109), ag (115), ag (127), ag (128), ag (133), ag (136), ag (138), ag (155), ag (156), ag (158), ag (163), ag (164), ag (168), ag (194), ag (204), ag (221), ag (235), ag (236), ag (249), ag (260), ag (263), ag (275), ag (291), ag (297), ag (302), ag (303), ag (305), Editing mismatches: 36, all mismatches: 36, alignment length: 290, cluster length: 284, total number of As: 76 Locations in RNA: 22 60 61 67 77 98 99 104 107 109 115 127 128 133 136 138 155 156 158 163 164 168 194 204 221 235 236 249 260 263 275 291 297 302 303 305 Locations in genome: 87429788 87429826 87429827 87429833 87429843 87429864 87429865 87429870 87429873 87429875 87429881 87429893 87429894 87429899 87429902 87429904 87429921 87429922 87429924 87429929 87429930 87429934 87429960 87429970 87429987 87430001 87430002 87430015 87430026 87430029 87430041 87430057 87430063 87430068 87430069 87430071 Upstream nucleotide (in genome): a t a a t c a c g g g t a g g a a a t a a t t t g g a t g c c g c c a g Upstream nucleotide summary: a: 12, c: 6, g: 10, t: 8, other: 0 Downstream nucleotide (in genome): a a t c g a g g g t c a c t a c a t c a a g g c g a c g g g c g g a g c Downstream nucleotide summary: a: 10, c: 9, g: 13, t: 4, other: 0 Dinucleotide summary: aa: 4, ac: 4, ag: 2, at: 2, ca: 2, cc: 1, cg: 3, ct: 0, ga: 2, gc: 2, gg: 4, gt: 2, ta: 2, tc: 2, tg: 4, tt: 0, other: 0 >chr16:87429783-87430072 (+) attaaaaaaatgtttccagccgggtgtggtggcacatgcctgtaatcccaacattttggtaggccaaggtgggcggatcacaaggtcaggagattgagaccatcctggctaacatgatgaaaccccgtctttactaaaaatacaaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctacttgggatgctgagggaggagaatggcatgaacctgggaggcgtagcttgcagtgagcagagatcgcgccactgcactccagcctgagtgacagagcaagac >DW417497:17-306 (+) attaagaaaatgtttccagccgggtgtggtggcacatgcctgtggtcccagcattttggtgggccaaggtgggcggatcacggggtcggggggttgaggccatcctggctggcatggtggagccccgtctttactaaaggtgcaaaggattggccgggcgtggtggcgggcgcctgtggtcccagctgcttgggatgctgaggggggagaatggcatgggcctgggaggcgtggcttgcagtgggcggagatcgcgccgctgcactccagcctgggtgacggagcggggc End editing Edited EST: DW423530, type: ag Aligns to: chr16:11107131-11107405 (++) All mismatches: ag (94), ag (116), ag (117), ag (157), ag (158), ag (159), ag (171), ag (188), ag (196), ag (201), ag (246), ag (252), ag (261), ag (279), ag (283), Editing mismatches: 15, all mismatches: 15, alignment length: 275, cluster length: 190, total number of As: 53 Locations in RNA: 94 116 117 157 158 159 171 188 196 201 246 252 261 279 283 Locations in genome: 11107208 11107230 11107231 11107271 11107272 11107273 11107285 11107302 11107310 11107315 11107360 11107366 11107375 11107393 11107397 Upstream nucleotide (in genome): t t a g a a g c a c c t a c c Upstream nucleotide summary: a: 5, c: 5, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g a t a a t g t c t c a c g g Downstream nucleotide summary: a: 4, c: 3, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 2, ca: 0, cc: 1, cg: 2, ct: 2, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chr16:11107131-11107405 (+) ggattaatctgagcatccttcctttccccattcagagtggatttggtattcatttaaaataaatttggattcaggctaggcatggtggctcacacctgtaatcccaccactttgggaggctgagatgggcggatcatttgaaatcaggagtttgagaccagcctggccaacatggtgaaaccccatctctgctaaaaatacaaaaatgaggccaggtgtgctggctcacacctgtaatcccagaactttgggaggccaaggcaggcagatcattt >DW423530:17-291 (+) ggattaatctgagcatccttcctttccccattcagagtggatttggtattcatttaaaataaatttggattcaggctgggcatggtggctcacacctgtggtcccaccactttgggaggctgagatgggcggatcatttggggtcaggagtttgggaccagcctggccaacgtggtgaagccccgtctctgctaaaaatacaaaaatgaggccaggtgtgctggctcacgcctgtgatcccagagctttgggaggccaaggcgggcggatcattt End editing Edited EST: DW425286, type: ag Aligns to: chr16:70489483-70489752 (++) All mismatches: ag (45), ag (96), ag (99), ag (108), ag (112), ag (132), ag (141), ag (142), ag (149), ag (150), ag (152), ag (170), ag (172), ag (176), ag (177), ag (178), ag (181), ag (207), ag (208), ag (217), ag (230), ag (234), ag (237), ag (240), ag (243), ag (249), ag (273), ag (279), Editing mismatches: 28, all mismatches: 28, alignment length: 270, cluster length: 234, total number of As: 59 Locations in RNA: 45 96 99 108 112 132 141 142 149 150 152 170 172 176 177 178 181 207 208 217 230 234 237 240 243 249 273 279 Locations in genome: 70489512 70489563 70489566 70489575 70489579 70489599 70489608 70489609 70489616 70489617 70489619 70489637 70489639 70489643 70489644 70489645 70489648 70489674 70489675 70489684 70489697 70489701 70489704 70489707 70489710 70489716 70489740 70489745 Upstream nucleotide (in genome): a a c c t c c a c a a a t a a a t t a t g c g a c a g g Upstream nucleotide summary: a: 12, c: 7, g: 4, t: 5, other: 0 Downstream nucleotide (in genome): g g g c t g a c a a c t c a a t g a t c g g g t c c g g Downstream nucleotide summary: a: 6, c: 7, g: 10, t: 5, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 2, at: 4, ca: 2, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 4, gt: 0, ta: 1, tc: 2, tg: 1, tt: 1, other: 0 >chr16:70489483-70489752 (+) cagcaaactattaattaaaaaaaaaaaaaaggccgggcgaggtggctcacgcctgtaatcccagcactgtgggaggcggaagcaggtagatcacctatggtcaggagtttgagaccagcgtggccaacatggcaaaaccccctctctactaataatacaaaaattagctgggcgtggtggtgcacgtctgtaatcccagctacttgggaggctgaggcaggagaatcactttaacctgggaggcggagattgcagtgagcc-gagatcgcg >DW425286:17-286 (+) cagcaaactattaatt-aaaaaaaaaaaagggccgggcgaggtggctcacgcctgtaatcccagcactgtgggaggcggaggcgggtagatcgcctgtggtcaggagtttgagaccggcgtggccggcatggcggagccccctctctactaatagtgcaagggttggctgggcgtggtggtgcacgtctgtggtcccagctgcttgggaggctggggcgggggagtcgctttagcctgggaggcggagattgcagtgggcccgggatcgcg End editing Edited EST: DW425979, type: ag Aligns to: chr16:16166539-16166805 (++) All mismatches: ag (127), ag (130), ag (148), ag (157), ag (167), ag (181), ag (191), ag (194), ag (250), ag (256), ag (257), ag (262), ag (263), ag (273), ag (283), Editing mismatches: 15, all mismatches: 15, alignment length: 267, cluster length: 157, total number of As: 43 Locations in RNA: 127 130 148 157 167 181 191 194 250 256 257 262 263 273 283 Locations in genome: 16166649 16166652 16166670 16166679 16166689 16166703 16166713 16166716 16166772 16166778 16166779 16166784 16166785 16166795 16166805 Upstream nucleotide (in genome): c c c c c c a a c t a c a g c Upstream nucleotide summary: a: 4, c: 9, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): g c g c g g c g c a t a c g n Downstream nucleotide summary: a: 2, c: 5, g: 6, t: 1, other: 1 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 1, ca: 1, cc: 3, cg: 4, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 1 >chr16:16166539-16166805 (+) tatcgtttcccagcccatccccctgagccagggatgttgtttgtaaccatctctctaggcacttaataataaatattaggccgggcacagtggctcacgcctgtaatcccagcactttggggagctgaggcaggtggatcacttgaggtcaggagttcgagatcagcctggccaacaaggtgaaaccccgtctctactgaaaatacaaaaattagctggacatggtgttgggcacctgtaatcccaactactcgggaggctgaggca >DW425979:17-283 (+) tatcgtttcccagcccatccccctgagccagggatgttgtttgtaaccatctctctaggcacttaataataaatattaggccgggcacagtggctcacgcctgtaatcccggcgctttggggagctgaggcgggtggatcgcttgaggtcgggagttcgagatcggcctggccagcagggtgaaaccccgtctctactgaaaatacaaaaattagctggacatggtgttgggcgcctgtggtcccggctactcggggggctgaggcg End editing Edited EST: DW426477, type: ag Aligns to: chr16:68284494-68284759 (++) All mismatches: ag (46), ag (49), ag (71), ag (79), ag (97), ag (117), ag (118), ag (133), ag (142), ag (143), ag (148), ag (151), ac (154), ag (159), ag (175), ag (179), ag (185), ag (199), ag (226), ag (235), ag (238), Editing mismatches: 20, all mismatches: 21, alignment length: 266, cluster length: 193, total number of As: 56 Locations in RNA: 46 49 71 79 97 117 118 133 142 143 148 151 159 175 179 185 199 226 235 238 Locations in genome: 68284523 68284526 68284548 68284556 68284574 68284594 68284595 68284610 68284619 68284620 68284625 68284628 68284636 68284652 68284656 68284662 68284676 68284703 68284712 68284715 Upstream nucleotide (in genome): t a g c g c a c c a t a t c c t t g a c Upstream nucleotide summary: a: 5, c: 7, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): t t g g g a c t a a c a g t c g g g g g Downstream nucleotide summary: a: 4, c: 3, g: 9, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 1, ca: 2, cc: 1, cg: 2, ct: 2, ga: 0, gc: 0, gg: 3, gt: 0, ta: 0, tc: 1, tg: 3, tt: 1, other: 0 >chr16:68284494-68284759 (+) gaccctaggccaggcatggtggctctgctataatcccatcactttgggaggctgaggcagtcagatcacctgagctcaggagttgaagaccagcctgggcaacttggtgaaaccccatctctaccaaaaatacaaaaaaattagctgggcatggtggcatgcacctgtagtcccagctacttagggggctgaggcaggagaattgcttgagccagggaagcagaggttgcagtgagcagaccactgtacccagcctgggttgcaga >DW426477:17-282 (+) gaccctaggccaggcatggtggctctgctgtagtcccatcactttgggaggctggggcagtcggatcacctgagctcaggggttgaagaccagcctgggcggcttggtgaaaccccgtctctaccggaaatgcagaacaattggctgggcatggtggcgtgcgcctgtggtcccagctacttggggggctgaggcaggagaattgcttgggccagggaggcggaggttgcagtgagcagaccactgtacccagcctgggttgcaga End editing Edited EST: DW431876, type: ag Aligns to: chr16:16136304-16136554 (++) All mismatches: ag (17), ag (18), ag (39), ag (40), ag (44), ag (48), ag (53), ag (63), ag (71), ag (72), tc (80), ag (87), ag (97), ag (112), ag (117), ag (122), ag (123), ag (139), ag (152), ag (153), ag (158), ag (162), ag (175), ga (176), ag (179), gc (181), ag (182), ag (185), ag (194), ag (198), ag (207), ag (214), ag (222), ag (230), Editing mismatches: 31, all mismatches: 34, alignment length: 251, cluster length: 214, total number of As: 59 Locations in RNA: 17 18 39 40 44 48 53 63 71 72 87 97 112 117 122 123 139 152 153 158 162 175 179 182 185 194 198 207 214 222 230 Locations in genome: 16136304 16136305 16136326 16136327 16136331 16136335 16136340 16136350 16136358 16136359 16136374 16136384 16136399 16136404 16136409 16136410 16136426 16136439 16136440 16136445 16136449 16136462 16136466 16136469 16136472 16136481 16136485 16136494 16136501 16136509 16136517 Upstream nucleotide (in genome): n a c a c c c c c a a a a c a a t t a c t g c g a a c g c c c Upstream nucleotide summary: a: 11, c: 13, g: 3, t: 3, other: 1 Downstream nucleotide (in genome): a t a g g g c g a g c c a t a t g a t g c g g g t c g g g g c Downstream nucleotide summary: a: 6, c: 6, g: 14, t: 5, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 2, at: 4, ca: 2, cc: 2, cg: 8, ct: 1, ga: 0, gc: 0, gg: 3, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 1 >chr16:16136304-16136554 (+) aatctcagcactttgggggcccaaggcaggcagatcacttgaggtcaggagttcaagaccagcttggctaacatggtgaaaccctgtctctactaaaaacataaaaattagctgggtgtggtagcgcacacctgtaatcccagctactcgggaggctgaggcaggagaatcgcttgaacgcaggaggcggaggttgcagggagtcaggatcgcaccattgcactccagcctgtgtgatagagcaagactcc >DW431876:17-267 (+) ggtctcagcactttgggggcccggggcgggcggatcgcttgaggtcgggagttcgggaccagcctggctagcatggtgaagccctgtctctactagaaacgtaaaggttagctgggtgtggtggcgcacacctgtggtcccggctgctcgggaggctggagcggcggagtcgcttgagcgcgggaggcgggggttgcggggagtcgggatcgcgccattgcactccagcctgtgtgatagagcaagactcc End editing Edited EST: DW432651, type: ag Aligns to: chr16:1371565-1371780 (++) All mismatches: ag (14), ag (16), ag (30), ag (56), ag (57), ag (59), ag (62), ag (65), ag (69), ag (79), ag (96), ag (101), ag (112), ag (118), ag (122), ag (136), ag (151), ag (157), ag (161), ag (166), ta (211), ga (226), Editing mismatches: 20, all mismatches: 22, alignment length: 215, cluster length: 154, total number of As: 44 Locations in RNA: 14 16 30 56 57 59 62 65 69 79 96 101 112 118 122 136 151 157 161 166 Locations in genome: 1371565 1371567 1371582 1371608 1371609 1371611 1371614 1371617 1371621 1371631 1371648 1371653 1371664 1371670 1371674 1371688 1371703 1371709 1371713 1371718 Upstream nucleotide (in genome): n g c a a t a a t t a c g g c g a c g g Upstream nucleotide summary: a: 6, c: 4, g: 6, t: 3, other: 1 Downstream nucleotide (in genome): g c t a t c a a g g t g g g g a g g g g Downstream nucleotide summary: a: 4, c: 2, g: 11, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 1, at: 2, ca: 0, cc: 0, cg: 3, ct: 1, ga: 1, gc: 1, gg: 4, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 1 >chr16:1371565-1371780 (+) agaccagcctggccaacatggcgaaaccctcgtccctactaaaaatacaaaaaattagttgggcgtagtggtgggtgcctctaatcccagctacctgggaggctgagacaggagaatcacttgaacccgggaggcggaagttgcagtgagccgagatcctgccactgctctccagcctggcgacggaggaatgctgtctcaaaaaaaaaaaaagca >DW432651:14-228 (+) ggg-cagcctggccaacgtggcgaaaccctcgtccctactaaaggtgcagaagattggttgggcgtggtggtgggtgcctctagtcccggctacctggggggctgggacgggagaatcacttggacccgggaggcggaggttgcggtgggccgggatcctgccactgctctccagcctggcgacggaggaatgctgtcacaaaaaaaaaaaaaaca End editing Edited EST: DW434292, type: ag Aligns to: chr16:25270902-25271146 (++) All mismatches: ag (15), ag (34), ag (40), ag (59), ag (64), ag (69), ag (83), ag (88), ag (90), ag (91), ag (96), ag (136), ag (137), ag (138), ag (146), ag (151), ag (159), Editing mismatches: 17, all mismatches: 17, alignment length: 245, cluster length: 145, total number of As: 40 Locations in RNA: 15 34 40 59 64 69 83 88 90 91 96 136 137 138 146 151 159 Locations in genome: 25270902 25270921 25270927 25270946 25270951 25270956 25270970 25270975 25270977 25270978 25270983 25271023 25271024 25271025 25271033 25271038 25271046 Upstream nucleotide (in genome): n c t g c c g c g a t t a a a t c Upstream nucleotide summary: a: 4, c: 5, g: 3, t: 4, other: 1 Downstream nucleotide (in genome): g c t g a g g g a g a a a a a g t Downstream nucleotide summary: a: 7, c: 1, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 1, at: 0, ca: 1, cc: 1, cg: 2, ct: 1, ga: 1, gc: 0, gg: 2, gt: 0, ta: 2, tc: 0, tg: 1, tt: 1, other: 1 >chr16:25270902-25271146 (+) aggctggtcgtggtggctcacgcctataatcccagcattttgggaggccaaggcaggtggatcgcttgaggtcagaagtttaagaccagcctggccaacatggcgaaaccccgtctctactaaaaatacaaaaattagctgggcatggtggcacacgcctgtgattctagctgattgggaggctgaggcatgagactcaacttgaacccgggaggcggaggttgcaatgagctgagattgtgcca >DW434292:15-259 (+) gggctggtcgtggtggctcgcgcctgtaatcccagcattttggggggccgaggcgggtggatcgcttggggtcgggggtttgagaccagcctggccaacatggcgaaaccccgtctctactgggaatacaagaattggctgggcgtggtggcacacgcctgtgattctagctgattgggaggctgaggcatgagactcaacttgaacccgggaggcggaggttgcaatgagctgagattgtgcca End editing Edited EST: DW436041, type: ag Aligns to: chr16:53205084-53205327 (++) All mismatches: ag (14), ag (15), ag (67), ag (68), ag (70), ag (72), ag (102), ag (105), ag (106), ag (110), ag (114), ag (118), ag (136), ag (142), ag (163), ag (207), ag (212), ag (239), Editing mismatches: 18, all mismatches: 18, alignment length: 244, cluster length: 226, total number of As: 62 Locations in RNA: 14 15 67 68 70 72 102 105 106 110 114 118 136 142 163 207 212 239 Locations in genome: 53205088 53205089 53205141 53205142 53205144 53205146 53205176 53205179 53205180 53205184 53205188 53205192 53205210 53205216 53205237 53205281 53205286 53205313 Upstream nucleotide (in genome): c a t a c c a a a t c c t c c g c c Upstream nucleotide summary: a: 5, c: 9, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): a g a c c g a a a g g t g g g g c g Downstream nucleotide summary: a: 5, c: 3, g: 9, t: 1, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 0, ca: 1, cc: 2, cg: 5, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 0 >chr16:53205084-53205327 (+) ggccaaggtgggtggatcatgaggtcaggagatcgagactatcctactatcctggctaacacagtgaaaccccgtctccactaaaaaatacaaaaaaattagccaggcatggtggcgggcgcctgtagtcccagctgctcgggaggctgaggcaggagaatggtgtgaacctgggaggcagagcttgcagtgatccgagatcacgccactgcactccagcctgggcaacagagcgagactccgt >DW436041:10-253 (+) ggccggggtgggtggatcatgaggtcaggagatcgagactatcctactatcctggctggcgcggtgaaaccccgtctccactaaaaaatacagaaggattggccgggcgtggtggcgggcgcctgtggtcccggctgctcgggaggctgaggcgggagaatggtgtgaacctgggaggcagagcttgcagtgatccgggatcgcgccactgcactccagcctgggcaacggagcgagactccgt End editing Edited EST: DW440888, type: ag Aligns to: chr16:89582960-89583325 (++) All mismatches: ag (71), ag (76), ag (79), ag (93), ag (98), ag (106), ag (114), ag (123), ag (133), ag (138), ag (146), ag (147), ag (148), ag (188), ag (210), ag (211), ag (216), ag (220), ag (237), ag (240), ag (256), ag (257), ag (264), ag (272), ag (276), ag (281), ag (318), tg (376), Editing mismatches: 27, all mismatches: 28, alignment length: 366, cluster length: 247, total number of As: 77 Locations in RNA: 71 76 79 93 98 106 114 123 133 138 146 147 148 188 210 211 216 220 237 240 256 257 264 272 276 281 318 Locations in genome: 89583014 89583019 89583022 89583036 89583041 89583049 89583057 89583066 89583076 89583081 89583089 89583090 89583091 89583130 89583152 89583153 89583158 89583162 89583179 89583182 89583198 89583199 89583206 89583214 89583218 89583223 89583260 Upstream nucleotide (in genome): c c c a g c c g t a g a a t t a c t c g c a g c g g c Upstream nucleotide summary: a: 6, c: 10, g: 7, t: 4, other: 0 Downstream nucleotide (in genome): t g c g g c g g g c a a c g a c g g g g a g a g g g a Downstream nucleotide summary: a: 6, c: 5, g: 15, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 2, at: 0, ca: 2, cc: 2, cg: 5, ct: 1, ga: 2, gc: 0, gg: 5, gt: 0, ta: 1, tc: 0, tg: 3, tt: 0, other: 0 >chr16:89582960-89583325 (+) tcaaacataaaaaattaagaaagaaaaggccgggcgtggtggctcatgcctgtcatcccagcactttgggaggccaaggcgagcagatcacaaggtcaggagatcgagaccattttagctaacacggtgaaaccctgtctctactaaaaatacaaaaaaaaaaaaaaa-ttaggcgtggtggtgggcacctgtaaccccagctagtcgggaggctgaggcaggagaatggcgtgaacccaagaggcgaagcttgcagtgagccgagatcgcgccactgcactccagcctgggcgacacagcaagactctgtctcaaaaaaaaaaattaagaaagaaaaaagcgacggcgagactcttgtctcaaaaa >DW440888:17-382 (+) tcaaacataaaaaattaagaaagaaaaggccgggcgtggtggctcatgcctgtcgtcccggcgctttgggaggccagggcgggcagatcgcaaggtcgggagatcgggaccattttggctagcacggtggggccctgtctctactaaaaatacaaaaaaaaaaaaaaaattgggcgtggtggtgggcacctgtggccccggctggtcgggaggctgaggcgggggaatggcgtgaacccgggaggcggagcttgcggtgggccgggatcgcgccactgcactccagcctgggcgacacagcgagactctgtctcaaaaaaaaaa-ttaagaaagaaaaaagcgacggcgagactcttgtcgcaaaaa End editing Edited EST: DB468282, type: ag Aligns to: chr16:48388264-48388690 (++) All mismatches: ag (43), ag (49), ag (57), ag (69), ag (80), ag (81), ag (88), ag (94), ag (96), ag (120), ag (123), ag (134), ca (202), Editing mismatches: 12, all mismatches: 13, alignment length: 427, cluster length: 92, total number of As: 23 Locations in RNA: 43 49 57 69 80 81 88 94 96 120 123 134 Locations in genome: 48388303 48388309 48388317 48388329 48388340 48388341 48388348 48388354 48388356 48388380 48388383 48388394 Upstream nucleotide (in genome): t c c c c a c c a c a t Upstream nucleotide summary: a: 3, c: 7, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g g c g a a a a t a t c Downstream nucleotide summary: a: 5, c: 2, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 2, ca: 4, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr16:48388264-48388690 (+) gtgtgccaccacgcccagctaatttttgtattttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcccaacctcaaatgatccggccaccttggcctcccaaaatgctggcattacaggcgtgagccaccacacccggcttacatgcattttttatcaccacaaactgaaactctgtacccactgaaaaagagctccaaattccaccctcaccccagaccctggtaaccactatttcactttctttctgaatttcccttcatatgagtgggatcaaacaagagttgtccttttgtgtttagcattcttacttagcaagccatcaactgctcgaacagtcactggggcaactacttttcgcccagtgtcctccagaaaagaaagatctggagggtcaggccactctttttct >DB468282:4-430 (+) gtgtgccaccacgcccagctaatttttgtattttttagtggagacggggtttcgccatgttggccgggctggtctcggactcccgacctcgagtgatccggccaccttggcctcccgaagtgctggcattgcaggcgtgagccaccacacccggcttacatgcattttttatcaccacaaactgaaactctgtacccaatgaaaaagagctccaaattccaccctcaccccagaccctggtaaccactatttcactttctttctgaatttcccttcatatgagtgggatcaaacaagagttgtccttttgtgtttagcattcttacttagcaagccatcaactgctcgaacagtcactggggcaactacttttcgcccagtgtcctccagaaaagaaagatctggagggtcaggccactctttttct End editing Edited EST: DB475777, type: ag Aligns to: chr16:48388264-48388757 (++) All mismatches: ag (43), ag (49), ag (57), ag (69), ag (80), ag (81), ag (88), ag (94), ag (96), ag (120), ag (123), ag (134), Editing mismatches: 12, all mismatches: 12, alignment length: 494, cluster length: 92, total number of As: 23 Locations in RNA: 43 49 57 69 80 81 88 94 96 120 123 134 Locations in genome: 48388303 48388309 48388317 48388329 48388340 48388341 48388348 48388354 48388356 48388380 48388383 48388394 Upstream nucleotide (in genome): t c c c c a c c a c a t Upstream nucleotide summary: a: 3, c: 7, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g g c g a a a a t a t c Downstream nucleotide summary: a: 5, c: 2, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 2, ca: 4, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr16:48388264-48388757 (+) gtgtgccaccacgcccagctaatttttgtattttttagtagagacagggtttcaccatgttggccaggctggtctcaaactcccaacctcaaatgatccggccaccttggcctcccaaaatgctggcattacaggcgtgagccaccacacccggcttacatgcattttttatcaccacaaactgaaactctgtacccactgaaaaagagctccaaattccaccctcaccccagaccctggtaaccactatttcactttctttctgaatttcccttcatatgagtgggatcaaacaagagttgtccttttgtgtttagcattcttacttagcaagccatcaactgctcgaacagtcactggggcaactacttttcgcccagtgtcctccagaaaagaaagatctggagggtcaggccactctttttcttcaaaataatggggtgcagaagggtagggatgaacctcttcctcctttgccactttagctttagctc >DB475777:4-497 (+) gtgtgccaccacgcccagctaatttttgtattttttagtggagacggggtttcgccatgttggccgggctggtctcggactcccgacctcgagtgatccggccaccttggcctcccgaagtgctggcattgcaggcgtgagccaccacacccggcttacatgcattttttatcaccacaaactgaaactctgtacccactgaaaaagagctccaaattccaccctcaccccagaccctggtaaccactatttcactttctttctgaatttcccttcatatgagtgggatcaaacaagagttgtccttttgtgtttagcattcttacttagcaagccatcaactgctcgaacagtcactggggcaactacttttcgcccagtgtcctccagaaaagaaagatctggagggtcaggccactctttttcttcaaaataatggggtgcagaagggtagggatgaacctcttcctcctttgccactttagctttagctc End editing Edited EST: BM703103, type: ag Aligns to: chr16:29383242-29383699 (++) All mismatches: ag (81), ag (94), ag (107), ag (113), ag (118), ag (224), ag (238), ag (241), ag (246), ag (286), ag (288), ag (289), ag (297), ag (300), ag (314), ag (317), ag (318), ag (325), ag (331), ag (334), ag (338), ag (349), ag (365), ag (369), ag (375), ag (385), ag (405), ag (411), ag (417), ag (433), ag (437), ag (451), Editing mismatches: 32, all mismatches: 32, alignment length: 458, cluster length: 371, total number of As: 124 Locations in RNA: 81 94 107 113 118 224 238 241 246 286 288 289 297 300 314 317 318 325 331 334 338 349 365 369 375 385 405 411 417 433 437 451 Locations in genome: 29383322 29383335 29383348 29383354 29383359 29383465 29383479 29383482 29383487 29383527 29383529 29383530 29383538 29383541 29383555 29383558 29383559 29383566 29383572 29383575 29383579 29383590 29383606 29383610 29383616 29383626 29383646 29383652 29383658 29383674 29383678 29383692 Upstream nucleotide (in genome): a g c c t c t a c c g a g c t c a c t t a t c c t t g c a g c c Upstream nucleotide summary: a: 6, c: 13, g: 5, t: 8, other: 0 Downstream nucleotide (in genome): g g a g g g t t a g a g c g g a a t c a t g g c g c g c c t g t Downstream nucleotide summary: a: 6, c: 6, g: 14, t: 6, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 2, ca: 3, cc: 2, cg: 6, ct: 2, ga: 1, gc: 1, gg: 2, gt: 1, ta: 1, tc: 2, tg: 4, tt: 1, other: 0 >chr16:29383242-29383699 (+) agaactaatgagcacagaactaagaaagcccaggcacagtggctcacatcagtaattctagggccttgggaggcaagacaagagaatcacttgaggccatgagttcaagggcagcctaggcaacatagtgggaccctatctccacaaaaataataatattattattattaaataaaataaaaggaagagacagccatgaagataactagctgaggccaggtacagtggctcatgcctataatcccaacactttgggaggttgaggtggacagattgcttgaggtcagaagttccagaccagactgaacaacatagcaaaaccccatccctactaaaaatacaaaaattagctgggcgtggtggcaggcacctgtagtcccagctactcgggaggctgaggcaggagaatcacctgaacctgggaggcggaggatgcagtgcgctgagatcatgccact >BM703103:1-458 (+) agaactaatgagcacagaactaagaaagcccaggcacagtggctcacatcagtaattctagggccttgggaggcaagacaggagaatcacttggggccatgagttcgagggcggcctgggcaacatagtgggaccctatctccacaaaaataataatattattattattaaataaaataaaaggaagagacagccatgaagataactagctgaggccaggtacggtggctcatgcctgtagtcccgacactttgggaggttgaggtggacagattgcttgaggtcgggggttccaggccggactgaacaacatggcggaaccccgtccctgctgaaagtacaaaaattggctgggcgtggtggcgggcgcctgtggtcccagctgctcgggaggctgaggcaggggaatcgcctgagcctgggaggcggagggtgcggtgcgctgagatcgtgccact End editing Edited EST: AW341425, type: ga Aligns to: chr16:29819965-29820236 (++) All mismatches: ga (110), ga (130), ga (136), ga (138), ga (146), ga (151), ga (155), ga (158), ga (168), ga (174), ga (181), ga (188), ga (196), ga (198), ga (204), ga (205), ga (212), ga (223), ga (225), ga (231), ga (233), ga (235), ga (241), ga (252), ga (256), ga (267), Editing mismatches: 26, all mismatches: 26, alignment length: 272, cluster length: 158, total number of Gs: 63 Locations in RNA: 110 130 136 138 146 151 155 158 168 174 181 188 196 198 204 205 212 223 225 231 233 235 241 252 256 267 Locations in genome: 29820072 29820092 29820098 29820100 29820108 29820113 29820117 29820120 29820130 29820136 29820143 29820150 29820158 29820160 29820166 29820167 29820174 29820185 29820187 29820193 29820195 29820197 29820203 29820214 29820218 29820229 Upstream nucleotide (in genome): c a a a c g a c c c a t a a t g a a a a g a g t t a Upstream nucleotide summary: a: 13, c: 5, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): a g a g c c a c g g g t a c g c a a g g a c g a a a Downstream nucleotide summary: a: 10, c: 6, g: 9, t: 1, other: 0 Dinucleotide summary: aa: 6, ac: 2, ag: 5, at: 0, ca: 1, cc: 2, cg: 2, ct: 0, ga: 1, gc: 2, gg: 1, gt: 0, ta: 2, tc: 0, tg: 1, tt: 1, other: 0 >chr16:29819965-29820236 (+) tcacgtgtgtggcaagatgctgagctcggcttatatttcggaccacatgaaggtgcacagccagggtcctcaccatgtctgtgagctctgcaacaaaggtacatgccgagggctgccgggagggccaggggcagagggtgggcgcctggccagacgccttgccacggatacgggttaagggtgctgtagccaagagctcgtggcgtctagattcctacaagaggtcaagggagcagcggggggacacctgaatgaacatcattagactctaa >AW341425:3-274 (+) tcacgtgtgtggcaagatgctgagctcggcttatatttcggaccacatgaaggtgcacagccagggtcctcaccatgtctgtgagctctgcaacaaaggtacatgccaagggctgccgggagggccaagggcaaaaggtgggcacctgaccaaacaccttgccacagatacaggttaaaggtgctatanccaaaaactcntaacgtctaaattcctacaaaaagtcaaagaaacancnaggggacacctaaataaacatcattaaactctaa End editing Edited EST: AW518198, type: ga Aligns to: chr16:61089360-61089812 (++) All mismatches: ga (14), ga (59), ga (93), ga (96), ga (106), ga (109), ga (112), ga (125), ga (146), ga (154), ga (159), tg (166), ga (182), tg (187), ga (210), ga (241), ga (259), ga (277), ga (291), ga (301), ga (316), ga (340), ga (343), ga (348), ga (351), ct (366), ga (370), ga (371), ga (377), ga (378), ga (404), ga (406), ga (418), ga (420), ga (422), ga (425), ga (426), ga (439), ga (441), tg (444), ga (449), Editing mismatches: 37, all mismatches: 41, alignment length: 454, cluster length: 435, total number of Gs: 84 Locations in RNA: 14 59 93 96 106 109 112 125 146 154 159 182 210 241 259 277 291 301 316 340 343 348 351 370 371 377 378 404 406 418 420 422 425 426 439 441 449 Locations in genome: 61089373 61089418 61089452 61089455 61089465 61089468 61089471 61089484 61089505 61089513 61089518 61089541 61089569 61089599 61089617 61089635 61089649 61089659 61089674 61089698 61089701 61089706 61089709 61089728 61089729 61089735 61089736 61089762 61089764 61089776 61089778 61089780 61089783 61089784 61089797 61089799 61089807 Upstream nucleotide (in genome): a g a a c c a t a a a t a a t t a c t t t a a t g t g a g a g t t g a g c Upstream nucleotide summary: a: 15, c: 4, g: 7, t: 11, other: 0 Downstream nucleotide (in genome): c c a g a a g c t g c t a a a a a t c c a g g g a g c g t g t a g t g t a Downstream nucleotide summary: a: 12, c: 7, g: 11, t: 7, other: 0 Dinucleotide summary: aa: 4, ac: 2, ag: 8, at: 1, ca: 3, cc: 0, cg: 0, ct: 1, ga: 1, gc: 2, gg: 0, gt: 4, ta: 4, tc: 3, tg: 3, tt: 1, other: 0 >chr16:61089360-61089812 (+) ctggtttgttgaagcagtaagtcagacaacatttgccacaataatgtctgtcaaagtggcttgccataaacaccccagcaccacattcatcagaagggcactctcgacgaaggcgactaattttgccattctcatccaccttatagtatttcaggacagccagcttaaccttctttctcttgtgcttattcttcttgggagtggtgtaagacttcttcttccttttcttagcaccacca-gaagtctcaacacaagatgaagagtagactccttttgaatattgtagtcagacaaagtacgtccatcttccagctgcttgccagcaaagatcagtctctgctgatcaggaggaattccttccttaccctggatcttggcctttacattttctatcgtatccgagggttcaacctcgagggtgatggtcttccccgtaagggttttcacgaaaat >AW518198:1-454 (+) ctggtttgttgaaacagtaagtcagacaacatttgccacaataatgtctgtcaaagtgacttgccataaacaccccagcaccacattcatcaaaaaggcactctcaacaaaagcgactaattttaccattctcatccaccttataatatttcaagacaaccagctgaaccttctttctcttatgctgattcttcttgggagtggtgtaaaacttcttcttccttttcttagcaccaccacaaagtctcaacacaagataaagagtagactccttttaaatattgtagtcaaacaaagtacatccatcttccagctacttgccancaaagatcagtctctactaatcaagaagaattccttccttatcctaaatcttaacctttacattttctatcgtatccnaagattcaacctcgaagataataatcttccccgtaaagattgtcacaaaaat End editing Edited EST: DB124220, type: ag Aligns to: chr17:2575079-2575548 (++) All mismatches: ag (21), ag (28), ag (53), ag (93), ag (99), ag (222), ag (226), ag (228), ag (229), ag (250), ag (251), ag (255), ag (273), ag (275), ag (322), ag (330), ag (334), ag (367), ag (371), ag (379), ag (402), ag (420), ag (425), ag (439), ag (449), ag (457), ag (460), ag (465), Editing mismatches: 28, all mismatches: 28, alignment length: 470, cluster length: 445, total number of As: 115 Locations in RNA: 21 28 53 93 99 222 226 228 229 250 251 255 273 275 322 330 334 367 371 379 402 420 425 439 449 457 460 465 Locations in genome: 2575099 2575106 2575131 2575171 2575177 2575300 2575304 2575306 2575307 2575328 2575329 2575333 2575351 2575353 2575400 2575408 2575412 2575445 2575449 2575457 2575480 2575498 2575503 2575517 2575527 2575535 2575538 2575543 Upstream nucleotide (in genome): t c c t c c t t a c a c g c c a t t c t g g c t t c c c Upstream nucleotide summary: a: 3, c: 13, g: 3, t: 9, other: 0 Downstream nucleotide (in genome): t g g c t c t a t a g g c g a a g c c g g g g c t c c c Downstream nucleotide summary: a: 4, c: 9, g: 10, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 1, ca: 2, cc: 5, cg: 5, ct: 1, ga: 0, gc: 1, gg: 2, gt: 0, ta: 1, tc: 3, tg: 2, tt: 3, other: 0 >chr17:2575079-2575548 (+) tagaaacagggtttaaccatattggccaggctggtcttgaactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggcatgaaccactgcgcctggcccaccattttaaacagagaaccaattccccattttttgtatccatttgctttatcttttttatatcttagaatatcaacctagaagctaggcacagtggctcacacctataatctcagcacttttggaggccaaggcaggaaggattgcttgaggacaggagttcgagaccagtgtgagcaaaatatggagaccttgtctctacaaaaaataaaatagttgtgggtgtggtggtaccagatgtggtggtacacacctgtgtagttccagctacccgacaggctgaggcgggaagagctcttgagcccaggagttcaaggctacagtgagctatgattgcaccactgcacttta >DB124220:1-470 (+) tagaaacagggtttaaccatgttggccgggctggtcttgaactcctgacctcgggtgatccgcccgcctcggcctcccaaagtgctgggattgcaggcgtgaaccactgcgcctggcccaccattttaaacagagaaccaattccccattttttgtatccatttgctttatcttttttatatcttagaatatcaacctagaagctaggcacagtggctcacgcctgtggtctcagcacttttggaggccggggcgggaaggattgcttgagggcgggagttcgagaccagtgtgagcaaaatatggagaccttgtctctacgaaaaatagaatggttgtgggtgtggtggtaccagatgtggtggtgcacgcctgtgtggttccagctacccgacaggctggggcgggaagagctcttgggcccgggagttcaaggctgcagtgagctgtgattgcgccgctgcgcttta End editing Edited EST: DW414393, type: ag Aligns to: chr17:48748342-48748628 (++) All mismatches: ag (76), ag (119), ag (124), ag (126), ag (134), ag (143), ag (160), ag (186), ag (192), ag (196), ag (200), ag (226), ag (227), ag (232), ag (249), tc (265), ag (309), Editing mismatches: 16, all mismatches: 17, alignment length: 285, cluster length: 236, total number of As: 66 Locations in RNA: 76 119 124 126 134 143 160 186 192 196 200 226 227 232 249 309 Locations in genome: 48748386 48748429 48748434 48748436 48748444 48748453 48748470 48748496 48748502 48748506 48748510 48748536 48748537 48748542 48748559 48748621 Upstream nucleotide (in genome): c a g t c t t t c t c t a c a t Upstream nucleotide summary: a: 3, c: 5, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): g c t a t g g g g c g a g g t a Downstream nucleotide summary: a: 3, c: 2, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 1, ca: 0, cc: 0, cg: 4, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 3, tc: 1, tg: 3, tt: 0, other: 0 >chr17:48748342-48748628 (+) tcttgcccggcatggtggctcccagcactctgggaggctgaggcaggtgtatcatttgaggtaaggagttcaaggccagccttgctaacatgataaaaccccatctctactagaaatacaaacaaattagccgagtgtgatggcgtgtgcctgtagtcccagctactcaggaggctgaggcaggagcattgcgtaagcccaggaggcggaggttgcaatgaactgagattgattgtatcactgcattccagcctgggcgacagagcaagactctgtcttaaaaaaaa >DW414393:32-316 (+) tcttgcccggcatggtggctcccagcactctgggaggctgaggcgggtgtatcatttgaggtaaggagttcaaggccagccttgctagcatggtgaaaccccgtctctactggaaatacaaacaaattggccgagtgtgatggcgtgtgcctgtggtcccggctgctcgggaggctgaggcaggagcattgcgtgggcccgggaggcggaggttgcagtgaactgagattgatcgtatcactgcattccagcctgggcgacagagcaagactctgtc--gaaaaaaa End editing Edited EST: DW415805, type: ag Aligns to: chr17:48837559-48837863 (++) All mismatches: ag (10), tg (14), ag (15), tg (16), ag (17), ag (27), ag (31), ag (44), ag (50), ag (58), ag (59), ag (79), ag (84), ag (120), ag (173), ag (225), ag (230), ag (235), ag (243), ag (244), ag (249), ag (259), ag (267), ag (274), ag (280), ag (283), ag (289), ag (292), ag (293), ag (294), ag (298), Editing mismatches: 29, all mismatches: 31, alignment length: 304, cluster length: 290, total number of As: 87 Locations in RNA: 10 15 17 27 31 44 50 58 59 79 84 120 173 225 230 235 243 244 249 259 267 274 280 283 289 292 293 294 298 Locations in genome: 48837561 48837567 48837569 48837579 48837583 48837596 48837602 48837610 48837611 48837631 48837636 48837672 48837725 48837777 48837782 48837787 48837795 48837796 48837801 48837811 48837819 48837826 48837832 48837835 48837841 48837844 48837845 48837846 48837850 Upstream nucleotide (in genome): c t t g c c a g a c a c c c t c c a c a g c t t t a a a t Upstream nucleotide summary: a: 8, c: 11, g: 3, t: 7, other: 0 Downstream nucleotide (in genome): t t g c g g t a c g c g g c g g a g g c a t c a c a a a g Downstream nucleotide summary: a: 7, c: 7, g: 11, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 1, at: 1, ca: 1, cc: 1, cg: 7, ct: 2, ga: 2, gc: 1, gg: 0, gt: 0, ta: 1, tc: 2, tg: 3, tt: 1, other: 0 >chr17:48837559-48837863 (+) acatgcctatagtcccagcgactcaggaggctgaggcaggagaatcccttgaacccaggaggcagaggttgcagtgaaccgagatcgcgccactgcactccagcctggacgacagagcaagaatcccgtctcagaaaaagaaaaaagggttgggggacctgagcacagtggctcacacctgtaatcccagtactttgggaggctgaggcgggtggatcaccttaggtcaggagttcaagaccagcctgggcaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggcgtggtg >DW415805:8-311 (+) acg-gccgggggtcccagcggctcgggaggctgaggcgggagagtcccttgggcccaggaggcagaggttgcggtgagccgagatcgcgccactgcactccagcctggacgacggagcaagaatcccgtctcagaaaaagaaaaaagggttgggggacctgagcacggtggctcacacctgtaatcccagtactttgggaggctgaggcgggtggatcgccttgggtcgggagttcgggaccggcctgggcagcatggtggaaccccgtctctgctgaaaatgcagggattggctgggcgtggtg End editing Edited EST: DW420449, type: ag Aligns to: chr17:5212632-5212915 (++) All mismatches: ag (35), ag (37), ag (41), ag (42), ag (68), ag (132), ag (133), ag (138), ag (148), ag (150), ag (175), ag (176), ag (178), ag (186), ag (194), ag (212), ag (213), ag (218), ag (258), ag (265), ag (278), ag (283), ag (285), Editing mismatches: 23, all mismatches: 23, alignment length: 284, cluster length: 251, total number of As: 63 Locations in RNA: 35 37 41 42 68 132 133 138 148 150 175 176 178 186 194 212 213 218 258 265 278 283 285 Locations in genome: 5212650 5212652 5212656 5212657 5212683 5212747 5212748 5212753 5212763 5212765 5212790 5212791 5212793 5212801 5212809 5212827 5212828 5212833 5212873 5212880 5212893 5212898 5212900 Upstream nucleotide (in genome): a c a a c c a c a c a a t t c t a c c c g g g Upstream nucleotide summary: a: 8, c: 9, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): c g a t c a g g c t a t c g t a t g g g g g t Downstream nucleotide summary: a: 4, c: 4, g: 9, t: 6, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 1, at: 3, ca: 1, cc: 1, cg: 5, ct: 2, ga: 0, gc: 0, gg: 2, gt: 1, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr17:5212632-5212915 (+) gtgtgatgagtcgttaaaacaggaaattgcaggctgggcgcggtggctcacacctgtaatcccagcactttgggaggccaacgggcgggggcggatcacctgaggtcgggagttcaagtccagcctggccaacatggagaaaccctgtctgtactaaaaatacaaaattagctgggcatggtggcgcatgcctgtaatcccagctgctcgggaggctgaggcagaagaattgcttgaacccaggaggcagacgttgaggtgagctgagattgcgccattgcact >DW420449:17-300 (+) gtgtgatgagtcgttaaagcgggaggttgcaggctgggcgcggtggctcacgcctgtaatcccagcactttgggaggccaacgggcgggggcggatcacctgaggtcgggagttcgggtccggcctggccagcgtggagaaaccctgtctgtactaaaggtgcaaaattggctgggcgtggtggcgcatgcctgtggtcccggctgctcgggaggctgaggcagaagaattgcttgaacccgggaggcggacgttgaggtgggctggggttgcgccattgcact End editing Edited EST: DW425415, type: ag Aligns to: chr17:15193340-15193619 (++) All mismatches: ag (17), ag (33), ag (34), ag (50), ag (104), ag (125), ag (127), ag (128), ag (131), ag (136), ag (141), ag (157), ag (190), ag (194), ag (203), ag (208), ag (209), ag (221), ag (229), ag (272), Editing mismatches: 20, all mismatches: 20, alignment length: 277, cluster length: 256, total number of As: 71 Locations in RNA: 17 33 34 50 104 125 127 128 131 136 141 157 190 194 203 208 209 221 229 272 Locations in genome: 15193351 15193367 15193368 15193384 15193438 15193459 15193461 15193462 15193465 15193470 15193475 15193491 15193524 15193528 15193537 15193542 15193543 15193555 15193563 15193606 Upstream nucleotide (in genome): c t a g a t a a t a t c g c c g a g c a Upstream nucleotide summary: a: 7, c: 5, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): g a t g g a a a c a g c g g c a c a g c Downstream nucleotide summary: a: 7, c: 5, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 1, at: 1, ca: 0, cc: 2, cg: 3, ct: 0, ga: 2, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr17:15193340-15193619 (+) cggccgggcgcagtggctcatgcctgtaatcccagcactttgggaggtcaaggcgtgcatatcacgaggtcaggagatcgagaccatcgtggctaacaaggtgaaaccctgtctctactaaaaatacaaaaaattagcctggcgtggtggcacgtacctgtaatcccagttacttgggaggctgaggcaggagaatcacttgaacccgggaggtgaaggttgcagtgagccgagatcatgccactgcactccagcctgatgacagaacgagactccatct >DW425415:9-285 (+) cggcc-gg-g-ggtggctcatgcctgtggtcccagcactttggggggtcaaggcgtgcatatcacgaggtcaggagatcgagaccatcgtggctaacagggtgaaaccctgtctctactgaggatgcaaagaattggcctggcgtggtggcgcgtacctgtaatcccagttacttgggaggctggggcgggagaatcgcttgggcccgggaggtggaggttgcggtgagccgagatcatgccactgcactccagcctgatgacagagcgagactccatct End editing Edited EST: DW432747, type: ag Aligns to: chr17:30287975-30288224 (++) All mismatches: ag (15), ag (16), ag (93), ag (108), ag (109), ag (110), ag (115), ag (121), ag (122), ag (138), ag (164), ag (173), ag (177), ag (183), ag (204), ag (211), ag (217), ag (227), Editing mismatches: 18, all mismatches: 18, alignment length: 250, cluster length: 213, total number of As: 63 Locations in RNA: 15 16 93 108 109 110 115 121 122 138 164 173 177 183 204 211 217 227 Locations in genome: 30287975 30287976 30288053 30288068 30288069 30288070 30288075 30288081 30288082 30288098 30288124 30288133 30288137 30288143 30288164 30288171 30288177 30288187 Upstream nucleotide (in genome): n a g t a a t a a c c g c a c t g c Upstream nucleotide summary: a: 6, c: 5, g: 3, t: 3, other: 1 Downstream nucleotide (in genome): a t a a a a c a t g g g g t g c g c Downstream nucleotide summary: a: 6, c: 3, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 0, at: 3, ca: 0, cc: 1, cg: 4, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 1, tc: 2, tg: 0, tt: 0, other: 1 >chr17:30287975-30288224 (+) aatcctagcacgttgggaggctgaggcaggtggattgcctgagctcaggagtttgagaccagcctgggcaatatgacgaaacctctctccactaaaaaatacaaaaaataaactgggcatggcagcatgtgcctgactcccagctattcaggaggctgaggcaggagaatggcttgaaccctgggaggcagaagttacagtgagccgagatcacgccattgaactccagcctgggtgacagagcgagact >DW432747:15-264 (+) ggtcctagcacgttgggaggctgaggcaggtggattgcctgagctcaggagtttgagaccagcctgggcaatatgacggaacctctctccactgggaaatgcaaaaggtaaactgggcatggcggcatgtgcctgactcccagctattcgggaggctggggcgggagagtggcttgaaccctgggaggcggaagttgcagtgggccgagatcgcgccattgaactccagcctgggtgacagagcgagact End editing Edited EST: DW434978, type: ag Aligns to: chr17:57794805-57795046 (++) All mismatches: ag (16), ag (23), ag (29), ag (48), ag (54), ag (55), ag (94), ag (129), ag (138), ag (140), ag (202), ta (233), ag (237), ag (242), Editing mismatches: 13, all mismatches: 14, alignment length: 242, cluster length: 227, total number of As: 45 Locations in RNA: 16 23 29 48 54 55 94 129 138 140 202 237 242 Locations in genome: 57794805 57794812 57794818 57794837 57794843 57794844 57794883 57794918 57794927 57794929 57794991 57795026 57795031 Upstream nucleotide (in genome): n t c c c a t t t c t a c Upstream nucleotide summary: a: 2, c: 5, g: 0, t: 5, other: 1 Downstream nucleotide (in genome): c g c g a g c t c g c t g Downstream nucleotide summary: a: 1, c: 5, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 1, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 3, tg: 1, tt: 1, other: 1 >chr17:57794805-57795046 (+) actgtctaggcccactgcaacctccacctcccaggctcaagcgattcttgtgcctcagcctcccaaggagctgggactacaggcctgcaccaccactcccagctaactttcgtatttttggtacagacagggttccacagtgttggccagtctggtctggaactcctggcctcaaacgatcctcctacctcccacctctggtacagtggctcatgcctgtaatcccagcactttgggaggcc >DW434978:16-257 (+) gctgtctgggcccgctgcaacctccacctcccgggctcgggcgattcttgtgcctcagcctcccaaggagctgggactgcaggcctgcaccaccactcccagctaactttcgtgtttttggtgcggacagggttccacagtgttggccagtctggtctggaactcctggcctcaaacgatcctcctgcctcccacctctggtacagtggctcatgccagtagtcccggcactttgggaggcc End editing Edited EST: DB532541, type: ag Aligns to: chr17:76199734-76200104 (++) All mismatches: gt (17), ag (21), tg (40), ag (99), ag (158), ag (163), ag (186), ag (187), ag (197), ag (217), ag (221), ag (222), ag (226), ag (252), ag (253), ag (274), ag (279), ag (288), ag (298), ag (318), ag (322), ag (323), Editing mismatches: 20, all mismatches: 22, alignment length: 372, cluster length: 303, total number of As: 77 Locations in RNA: 21 99 158 163 186 187 197 217 221 222 226 252 253 274 279 288 298 318 322 323 Locations in genome: 76199753 76199831 76199890 76199895 76199918 76199919 76199929 76199949 76199953 76199954 76199958 76199984 76199985 76200006 76200011 76200020 76200030 76200050 76200054 76200055 Upstream nucleotide (in genome): c t g c c a a t a a t t a t c c c g t a Upstream nucleotide summary: a: 6, c: 6, g: 2, t: 6, other: 0 Downstream nucleotide (in genome): c c g g a c c c a a g a t a g c g g a g Downstream nucleotide summary: a: 6, c: 6, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 1, at: 1, ca: 1, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 3, tc: 2, tg: 1, tt: 0, other: 0 >chr17:76199734-76200104 (+) atttgggatcttggcagac-actgctgttccctagggtcttcctacagagttgccttcaagcatgttcatgttaatagcttacatttaatggccaggtacggtggctcacgcctgtaatcccaacactttggaagggcaaggcggacggatcacttgaggtcaggagttcgagaccagcctggccaacgtggtgaaaccctgtctctactaaaaatacaaaaattagctggacgtggtggtgtgtgcctgtaatcccagctactcgggaggctaatgcaggagaatcacttgaacccaggaggcggaggttgcagtgagctaagatcatgccactgcactccacccagggtgacagagcgagactctgtctc >DB532541:1-372 (+) atttgggatcttggcatacagctgctgttccctagggtcgtcctacagagttgccttcaagcatgttcatgttaatagcttacatttaatggccaggtgcggtggctcacgcctgtaatcccaacactttggaagggcaaggcggacggatcacttggggtcgggagttcgagaccagcctggccggcgtggtgaagccctgtctctactaaaaatgcaaggattggctggacgtggtggtgtgtgcctgtggtcccagctactcgggaggctgatgcgggagaatcgcttgaacccgggaggcggaggttgcagtgggctgggatcatgccactgcactccacccagggtgacagagcgagactctgtctc End editing Edited EST: BQ707690, type: ag Aligns to: chr17:41383012-41383489 (++) All mismatches: ag (153), ag (208), ag (223), ag (243), ag (271), ag (279), ag (306), ag (319), ag (324), ag (325), ag (360), ag (361), ag (362), ag (379), ag (382), ag (416), ag (438), ag (442), ag (444), ag (448), ag (466), Editing mismatches: 21, all mismatches: 21, alignment length: 478, cluster length: 314, total number of As: 89 Locations in RNA: 153 208 223 243 271 279 306 319 324 325 360 361 362 379 382 416 438 442 444 448 466 Locations in genome: 41383147 41383202 41383217 41383237 41383265 41383273 41383300 41383313 41383318 41383319 41383354 41383355 41383356 41383373 41383376 41383410 41383432 41383436 41383438 41383442 41383460 Upstream nucleotide (in genome): g a a t g a g g a a a a a a a t c t t c a Upstream nucleotide summary: a: 11, c: 2, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): g g g c g g t g a g a a a c a a g t g g g Downstream nucleotide summary: a: 6, c: 2, g: 11, t: 2, other: 0 Dinucleotide summary: aa: 5, ac: 1, ag: 5, at: 0, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 3, gt: 1, ta: 1, tc: 1, tg: 1, tt: 1, other: 0 >chr17:41383012-41383489 (+) ccagcctcagcgacagagtgagactccgtctcaaaaaaaaaaaaaaaaaaaaaagcttgggccagtggctcacacctgtaatcccagcactttgggaggcggcaggcaggcggatcaccagaggttgggagttggagaccagcctgaccaacatggagaaaccccatctgtactaaaaagcctctgaggaagagtgggggaaagaagccagagagaaaagactttactgctgaattgtccatggggcccactgagactcaaagctaaggtgggaaggtcttctatctgatcaggacccaggagagaaaggtactttgcagatgttccctgggagccttgggaaaaatgcctccctccctcaacaaagcaggcggggcctgcccagttgccctggcagtaaccacattgtgaggtggttccagttataggcagaggggtctgagtgggaagagacagaggtggtgggagcagtgggctc >BQ707690:18-495 (+) ccagcctcagcgacagagtgagactccgtctcaaaaaaaaaaaaaaaaaaaaaagcttgggccagtggctcacacctgtaatcccagcactttgggaggcggcaggcaggcggatcaccagaggttgggagttggggaccagcctgaccaacatggagaaaccccatctgtactaaaaagcctctgaggaggagtgggggaaagaggccagagagaaaagactttgctgctgaattgtccatggggcccactgggactcaaggctaaggtgggaaggtcttctatctggtcaggacccaggggagaggggtactttgcagatgttccctgggagccttgggagggatgcctccctccctcagcagagcaggcggggcctgcccagttgccctggcagtgaccacattgtgaggtggttccggttgtgggcggaggggtctgagtgggaggagacagaggtggtgggagcagtgggctc End editing Edited EST: AW119160, type: ga Aligns to: chr17:80560516-80560904 (++) All mismatches: ta (98), ga (120), ga (124), ga (133), ga (137), ga (147), ga (157), ga (161), ga (163), ga (166), ga (167), ga (170), ga (172), ga (174), ga (179), ga (180), ga (181), gt (192), ga (193), ga (194), ga (195), ga (199), ga (201), ga (207), ga (211), ga (214), ga (215), ga (218), ga (230), ga (259), ga (270), ga (271), tg (280), ga (289), ga (293), ga (294), ga (304), cg (311), ga (314), ga (318), ga (319), ga (320), gt (328), ga (329), ga (330), ga (338), ga (339), ga (344), ga (348), ga (349), ga (359), Editing mismatches: 46, all mismatches: 51, alignment length: 389, cluster length: 239, total number of Gs: 66 Locations in RNA: 120 124 133 137 147 157 161 163 166 167 170 172 174 179 180 181 193 194 195 199 201 207 211 214 215 218 230 259 270 271 289 293 294 304 314 318 319 320 329 330 338 339 344 348 349 359 Locations in genome: 80560635 80560639 80560648 80560652 80560662 80560672 80560676 80560678 80560681 80560682 80560685 80560687 80560689 80560694 80560695 80560696 80560708 80560709 80560710 80560714 80560716 80560722 80560726 80560729 80560730 80560733 80560745 80560774 80560785 80560786 80560804 80560808 80560809 80560819 80560829 80560832 80560833 80560834 80560844 80560845 80560853 80560854 80560859 80560863 80560864 80560873 Upstream nucleotide (in genome): c c a a t c t t c g c a g a g g g g g a g a t t g t t t t g a a g t t t g g g g t g a t g a Upstream nucleotide summary: a: 10, c: 5, g: 17, t: 14, other: 0 Downstream nucleotide (in genome): c g g a g a t c g c a g c g g c g g a g c c a g c a t t g t a g a t g g g a g a g c a g t g Downstream nucleotide summary: a: 11, c: 9, g: 20, t: 6, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 6, at: 0, ca: 2, cc: 1, cg: 2, ct: 0, ga: 4, gc: 6, gg: 5, gt: 2, ta: 2, tc: 1, tg: 7, tt: 4, other: 0 >chr17:80560516-80560904 (+) tggtaggaaatgtccctgacctttcagaaccgaacccaatcctgaggctgactcctctacggaaaatgaggacaggacgggggtgagggaatgagagtgggaggtccctgcacctcctcgcccggctcctcaggaagaaaaccgctggcccttcccgagtgtgccggccgagggccgagggccgtgcacatggggagagggcgtcagcctgatggctgagcttttaaatgtcatcatcataacattatttatttaaatgtagttattttggtatttaatttttttttagagaggaaaaaacctgtattttcctgg-tgggatgaaatagggatgaaatggctcagaatggtatatt-taggcaattttaaaacatttattatttacataaa >AW119160:1-389 (+) tggtaggaaatgtccctgacctttcagaaccgaacccaatcctgaggctgactcctctacggaaaatgaggacaggacgggggtgagggaatgagagagggaggtccctgcacctcctcacccagctcctcaagaaaaaaaccgctagcccttcccaagtataccaaccaaagaccnaaaaccgtgcacattaaaagaagacgtcaacctaataactaagcttttaaatatcatcatcataacattatttatttaaatatagttattttaatatttaatgtttttttaaagaaaaaaaaacctatattttgctaggtaaa-tgaaatataaatgaaataactcaaaataatatattgtaa-caattttaaaacatttattatttacataaa End editing Edited EST: AW129400, type: ga Aligns to: chr17:5336097-5336485 (++) All mismatches: ga (68), ga (108), ga (194), ga (221), ac (228), ga (246), ga (294), ga (321), ga (331), ga (356), ga (372), ga (376), ga (381), ga (393), Editing mismatches: 13, all mismatches: 14, alignment length: 391, cluster length: 324, total number of Gs: 62 Locations in RNA: 68 108 194 221 246 294 321 331 356 372 376 381 393 Locations in genome: 5336146 5336186 5336272 5336297 5336322 5336370 5336397 5336407 5336432 5336448 5336452 5336457 5336469 Upstream nucleotide (in genome): a a a a a a a t a c c a a Upstream nucleotide summary: a: 10, c: 2, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): a a a c c a g a t g g g g Downstream nucleotide summary: a: 5, c: 2, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 4, ac: 2, ag: 3, at: 1, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr17:5336097-5336485 (+) ttggaggagataaaccaattttatgtctatcatgttatacaaaaatctagaaataatagatttgtacagaaaaaaatgataataaatgagaacacaaaacatataatttaaatttggtattttttcccccatgatattaggatgataatcatttcaaagcacatgtctagcttcagagtaggatttgtt-cac-tggccaaag-cctgccatgaaactatggctttcagcatctgtctgctctactggctcttgacaaaactcttgaggtcttcaagaaaagtaatgtactcctggtgctccagggctgtgctgagctccaccagctcatctgcaaaagtgttgtccacccctcggtcggcaaggaaatccattaggtggtcatataaggcc >AW129400:19-409 (+) ttggaggagataaaccaattttatgtctatcatgttatacaaaaatctaaaaataatagatttgtacagaaaaaaatgataataaatgaaaacacaaaacatataatttaaatttggtattttttcccccatgatattaggatgataatcatttcaaagcacatgtctagcttcaaagtaggatttgttccacttggccaaaaccct-ccctgaaactatggctttcaacatctgtctgctctactggctcttgacaaaactcttgaggtcttcaaaaaaagtaatgtactcctggtgctccaaggctgtgctaanctccaccanctcatctgcaaaaatgttgtccacccctcagtcagcaaagaaatccattaagtggtcatataaggcc End editing Edited EST: DW426996, type: ag Aligns to: chr18:18926979-18927242 (++) All mismatches: ag (101), ag (112), ag (115), ag (119), ag (130), ag (156), ag (162), ag (166), ag (169), ag (181), ag (197), ag (198), ag (202), ag (205), ag (209), ag (222), ag (230), ag (257), ag (260), ag (265), Editing mismatches: 20, all mismatches: 20, alignment length: 264, cluster length: 165, total number of As: 44 Locations in RNA: 101 112 115 119 130 156 162 166 169 181 197 198 202 205 209 222 230 257 260 265 Locations in genome: 18927063 18927074 18927077 18927081 18927092 18927118 18927124 18927128 18927131 18927143 18927159 18927160 18927164 18927167 18927171 18927184 18927192 18927219 18927222 18927227 Upstream nucleotide (in genome): a t t a t t c t t g g a c g c g g c c c Upstream nucleotide summary: a: 3, c: 6, g: 5, t: 6, other: 0 Downstream nucleotide (in genome): c c a t g g g c g c a c g g g g t a g a Downstream nucleotide summary: a: 4, c: 5, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 1, ca: 2, cc: 0, cg: 4, ct: 0, ga: 1, gc: 1, gg: 2, gt: 1, ta: 1, tc: 2, tg: 3, tt: 0, other: 0 >chr18:18926979-18927242 (+) gggacattttcattcctgatcctatttgacttctcctaccttttaaaactgtctaccaccgatcagcctgaccaatatggtgaaaccccgtctctactaaaaatataaaaattagctgggcgtggtggtgggtgcctgtagtcccagctactagggaggctgagacaggagaattgcttgaacccaggaggcagtggttgcagtgagcctgagattgcaccactgcactccagcctgagcaacagagcaagactccgtctcaaa >DW426996:17-280 (+) gggacattttcattcctgatcctatttgacttctcctaccttttaaaactgtctaccaccgatcagcctgaccaatatggtgaagccccgtctctgctgaaagtataaaaattggctgggcgtggtggtgggtgcctgtggtcccggctgctggggaggctgaggcaggagaattgcttgggcccggggggcggtggttgcagtgggcctgaggttgcaccactgcactccagcctgagcgacggagcgagactccgtctcaaa End editing Edited EST: AV763535, type: ag Aligns to: chr18:29648883-29649168 (++) All mismatches: at (21), ag (30), ag (48), ag (57), ag (60), ag (65), ag (68), ag (120), ag (135), ag (161), ag (184), ag (188), ag (190), ag (191), ag (194), ag (197), ag (202), ag (214), ag (221), ag (234), ag (245), ag (264), tc (280), ag (285), Editing mismatches: 22, all mismatches: 24, alignment length: 286, cluster length: 256, total number of As: 74 Locations in RNA: 30 48 57 60 65 68 120 135 161 184 188 190 191 194 197 202 214 221 234 245 264 285 Locations in genome: 29648912 29648930 29648939 29648942 29648947 29648950 29649002 29649017 29649043 29649066 29649070 29649072 29649073 29649076 29649079 29649084 29649096 29649103 29649116 29649127 29649146 29649167 Upstream nucleotide (in genome): c c c a c g t t t g c g a a c g c t g t c a Upstream nucleotide summary: a: 4, c: 8, g: 5, t: 5, other: 0 Downstream nucleotide (in genome): c g c g g g a g a g g a g t c a g c t c g a Downstream nucleotide summary: a: 5, c: 5, g: 10, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 1, ca: 0, cc: 3, cg: 5, ct: 0, ga: 2, gc: 0, gg: 2, gt: 1, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr18:29648883-29649168 (+) acgcggtggcttacgcttgtaatcccagcactttgggaggctgaagcaggcggatcacaaggtcaggagttcgagaccagcctggccaacactggtctctgtgaaactccgtctctactaaaaatacaaaaattagctggacgtgttggcgggcatctgtaataccagctacttgggaggctgaggcagaagaatcacttgaacccgggaggcagaggttacagtgagctgagatcgcaccagtacactccagcctgggtaacagagctagactccatctcaaaaa >AV763535:1-286 (+) acgcggtggcttacgcttgttatcccagcgctttgggaggctgaagcgggcggatcgcagggtcgggggttcgagaccagcctggccaacactggtctctgtgaaactccgtctctactgaaaatacaaaaattggctggacgtgttggcgggcatctgtgataccagctacttgggaggctggggcgggggagtcgcttggacccgggaggcggaggttgcagtgagctgaggtcgcaccagtgcactccagcctgggtaacggagctagactccatcccaaaga End editing Edited EST: DA104269, type: ag Aligns to: chr19:50788021-50788555 (++) All mismatches: ag (214), ag (234), ag (237), ag (238), ag (246), ag (273), ag (286), ag (289), ag (291), ag (300), ag (343), ag (385), Editing mismatches: 12, all mismatches: 12, alignment length: 535, cluster length: 172, total number of As: 30 Locations in RNA: 214 234 237 238 246 273 286 289 291 300 343 385 Locations in genome: 50788234 50788254 50788257 50788258 50788266 50788293 50788306 50788309 50788311 50788320 50788363 50788405 Upstream nucleotide (in genome): a a c a c t c c c a c c Upstream nucleotide summary: a: 4, c: 7, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): c g a t c c c c c t g g Downstream nucleotide summary: a: 1, c: 6, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 2, ca: 1, cc: 4, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr19:50788021-50788555 (+) ttttacatatgatgctatcatggctccatgttaatttttgtgaatataaatatccaagtattccaacactgctctccactgacttgtttttgcatatctattgaaagtcatttttcttcttcttcttctcctccttctttttcttcttcttcttctttttttttttttttttgcccaggctggagtgcagtggcgtgatcttggcttgctgcaacttctgcttcccgggttcaagcaattctcccacctcagcctcccgagtggcttggattacaggtgtgcgccaccacacctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggtggtcttgaactcctgacttcaggcgatctgcctgcctcagcctcccaatatgctggaattacaagcataagccactgcaccagccttttcttcttatttgaagttattttgcctcttctagttcctttgcatttccgtatgtattttagaatcagtttgtcaatttctaccccaaaacaaaaagccttc >DA104269:1-535 (+) ttttacatatgatgctatcatggctccatgttaatttttgtgaatataaatatccaagtattccaacactgctctccactgacttgtttttgcatatctattgaaagtcatttttcttcttcttcttctcctccttctttttcttcttcttcttctttttttttttttttttgcccaggctggagtgcagtggcgtgatcttggcttgctgcagcttctgcttcccgggttcaggcggttctcccgcctcagcctcccgagtggcttggattgcaggtgtgcgccgccgcgcctggctagtttttgtatttttagtagagatggggtttcaccatgttggccgggtggtcttgaactcctgacttcaggcgatctgcctgcctcggcctcccaatatgctggaattacaagcataagccactgcaccagccttttcttcttatttgaagttattttgcctcttctagttcctttgcatttccgtatgtattttagaatcagtttgtcaatttctaccccaaaacaaaaagccttc End editing Edited EST: DA146853, type: ag Aligns to: chr19:57937144-57937685 (++) All mismatches: ag (42), ag (70), ag (203), ag (219), ag (238), ag (239), ag (243), ag (268), ag (278), ag (288), ag (291), ag (300), ag (305), ag (319), ag (348), ag (361), ag (382), ag (401), ag (413), ag (421), tg (528), Editing mismatches: 20, all mismatches: 21, alignment length: 543, cluster length: 379, total number of As: 87 Locations in RNA: 42 70 203 219 238 239 243 268 278 288 291 300 305 319 348 361 382 401 413 421 Locations in genome: 57937185 57937213 57937345 57937361 57937380 57937381 57937385 57937410 57937420 57937430 57937433 57937442 57937447 57937461 57937490 57937503 57937524 57937543 57937555 57937563 Upstream nucleotide (in genome): a t g a c a a t t c a c a t c a c a t t Upstream nucleotide summary: a: 8, c: 5, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): c g t c a g t g c c t g t g g c c g c a Downstream nucleotide summary: a: 2, c: 7, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 3, ag: 2, at: 3, ca: 1, cc: 2, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 2, tg: 3, tt: 0, other: 0 >chr19:57937144-57937685 (+) cttagctgaattcacattcctctgatagaaggtgttttcaaactgatgccgttcttagtgcctcaaactagatcctgttcatacttgttagaacaagttattacaaattcactttggtgtaaaaaattgaaatccatacataa-tttttttttttttttttgacagagtctcactaacgctaggttggagtgcagtggcatgatctcggctcattgcaacctccgcctcctgggttcaagcaattctcctgcctcagcctcttgagtagctgggattacaggtgcccacaatcacgcccagctaatttttgtatttttagtagagatgggttttcactctgttggccaggctgctctcgaactcctgacctcaggtgatccacctgcctgggcctcacaaagtgctgtgattacaggcttaagccaccacccctggccaattttttcataatatacatttttttctcatttttcatgaaacttttgaagacccctcatattctagatattccttctcagatatgtggttttcaaatactttct >DA146853:1-543 (+) cttagctgaattcacattcctctgatagaaggtgttttcaagctgatgccgttcttagtgcctcaaactggatcctgttcatacttgttagaacaagttattacaaattcactttggtgtaaaaaattgaaatccatacataattttttttttttttttttgacagagtctcactaacgctaggttggagtgcagtggcatggtctcggctcattgcagcctccgcctcctgggttcgggcagttctcctgcctcagcctcttgagtggctgggattgcaggtgcccgcagtcacgcccggctagtttttgtatttttggtagagatgggttttcactctgttggccgggctgctctcgagctcctgacctcaggtgatccgcctgcctgggcctcacaaggtgctgtgattgcaggcttgagccaccacccctggccaattttttcataatatacatttttttctcatttttcatgaaacttttgaagacccctcatattctagatattccttctcagatatgtgggtttcaaatactttct End editing Edited EST: DB002440, type: ag Aligns to: chr19:10740263-10740612 (++) All mismatches: ag (17), ag (35), ag (69), ag (92), ag (226), ag (250), ag (263), ag (269), ag (270), ag (274), ag (287), ag (295), ag (311), tc (314), ag (345), ag (351), Editing mismatches: 15, all mismatches: 16, alignment length: 352, cluster length: 333, total number of As: 68 Locations in RNA: 17 35 69 92 226 250 263 269 270 274 287 295 311 345 351 Locations in genome: 10740279 10740297 10740331 10740354 10740486 10740510 10740523 10740529 10740530 10740534 10740547 10740555 10740571 10740605 10740611 Upstream nucleotide (in genome): t c t a a a c c a a c t c t t Upstream nucleotide summary: a: 5, c: 5, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): t c c g t c g a g t g a g t g Downstream nucleotide summary: a: 2, c: 3, g: 6, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 2, ca: 1, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 2, other: 0 >chr19:10740263-10740612 (+) tattactattattattattttgacacagtgtctcactctgtcagccagtggcaggatcatagctcgctacagcctggaactcctgggcttaagcgatcttcccacctgggccttccaaagtgctggcacaagacaggcctgagccaccctgcctggccctatataagatatc--tttttttttttttgagacagagtctcgctctgtcgcccaggctggagtgcaatggtgcgatcttggctcactgcaacctccgccacccaggttcaagcaattctcctgcctcagcctcctaagtagctgggattacaggtgcccgccaccacacccagctaattttttgtatttttag >DB002440:1-352 (+) tattactattattattgttttgacacagtgtctcgctctgtcagccagtggcaggatcatagctcgctgcagcctggaactcctgggcttaggcgatcttcccacctgggccttccaaagtgctggcacaagacaggcctgagccaccctgcctggccctatataagatatctttttttttttttttgagacagagtctcgctctgtcgcccaggctggagtgcagtggtgcgatcttggctcactgcagcctccgccacccgggttcgggcagttctcctgcctcggcctcctgagtagctgggattacgggcgcccgccaccacacccagctaattttttgtgtttttgg End editing Edited EST: DA950969, type: ag Aligns to: chr19:39981716-39982173 (++) All mismatches: ag (69), ag (111), ag (130), ag (155), ag (168), ct (179), ag (194), ag (198), ag (211), ag (219), ag (220), ag (223), ag (260), ag (281), ag (285), ag (354), ag (355), ag (356), ag (374), Editing mismatches: 18, all mismatches: 19, alignment length: 459, cluster length: 305, total number of As: 60 Locations in RNA: 69 111 130 155 168 194 198 211 219 220 223 260 281 285 354 355 356 374 Locations in genome: 39981783 39981825 39981843 39981868 39981881 39981907 39981911 39981924 39981932 39981933 39981936 39981973 39981994 39981998 39982067 39982068 39982069 39982087 Upstream nucleotide (in genome): t g t c c a a c c a t a g c c a a c Upstream nucleotide summary: a: 6, c: 7, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): c g t c c g t a a g g t g g a a g t Downstream nucleotide summary: a: 4, c: 3, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 3, at: 2, ca: 3, cc: 2, cg: 1, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 1, tg: 1, tt: 1, other: 0 >chr19:39981716-39982173 (+) gtagcagtgttctccactggaactttctgtgatgtttggttcatgttctaggtctgtactgtccagtacagtagccagtggccacataaacctttgttttttttttttgagacggagtttcg-ctcttattgcccaggctggagtgcaatggcacgacgtcggctcaccacatcctccgcctcccgggttcaagcaatgctcccgcctcaacctcccaagtagctgagattacaggcgcacaccaccacgcccggctaatttttgtatttttttagtagagacagggtttcaccatgttggttaggctggtctcgaactcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattgcaggcatgagccaccatgcctggccccacataaagtttctgagcacttgaaatgtggctagtgtgactgagaaactgaatttttaattttgt >DA950969:2-460 (+) gtagcagtgttctccactggaactttctgtgatgtttggttcatgttctaggtctgtactgtccagtgcagtagccagtggccacataaacctttgttttttttttttgggacggagtttcgcctcttgttgcccaggctggagtgcaatggcgcgacgtcggctcgccacatcctctgcctcccgggttcaggcagtgctcccgcctcgacctcccgggtggctgagattacaggcgcacaccaccacgcccggctagtttttgtatttttttagtagggacggggtttcaccatgttggttaggctggtctcgaactcctgacctcgtgatccgcccgcctcggcctcccggggtgctgggattgcaggcgtgagccaccatgcctggccccacataaagtttctgagcacttgaaatgtggctagtgtgactgagaaactgaatttttaattttgt End editing Edited EST: DB070673, type: ag Aligns to: chr19:5911906-5912459 (++) All mismatches: ag (20), ag (47), ag (61), ag (181), ag (242), ag (323), ag (328), ag (347), ag (360), ag (366), ag (370), ag (371), ag (384), ag (396), ag (406), ag (414), ct (423), ag (428), ag (442), ag (447), ag (448), ag (451), ag (455), ag (457), ag (488), ag (489), ag (490), ag (529), ag (548), ag (551), Editing mismatches: 29, all mismatches: 30, alignment length: 552, cluster length: 534, total number of As: 99 Locations in RNA: 20 47 61 181 242 323 328 347 360 366 370 371 384 396 406 414 428 442 447 448 451 455 457 488 489 490 529 548 551 Locations in genome: 5911925 5911952 5911966 5912086 5912147 5912230 5912235 5912254 5912267 5912273 5912277 5912278 5912291 5912303 5912313 5912321 5912335 5912349 5912354 5912355 5912358 5912362 5912364 5912395 5912396 5912397 5912436 5912455 5912458 Upstream nucleotide (in genome): a a c a c a c a c c c a c t t c c t t a t g c c a a a c g Upstream nucleotide summary: a: 10, c: 12, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): g g g c g t c c g t a t g g c t g t a g g c g a a c a t g Downstream nucleotide summary: a: 5, c: 6, g: 12, t: 6, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 3, at: 2, ca: 2, cc: 1, cg: 6, ct: 3, ga: 0, gc: 1, gg: 1, gt: 0, ta: 1, tc: 1, tg: 2, tt: 1, other: 0 >chr19:5911906-5912459 (+) tcttgaactcctgacctcaagtgatccgcccacctcagcctcccaaagtgctgggattacagctgtgagccaccgcgcccagccctggcctctttttttaagttatttatttatttttgagacagagtctcactctgtcgcccaggctgtggtgcagtggcatggtcttggttcactgcaacctctgcctcctgggttcaagtgattctcctgcctcagcctctggagtaggtgggattacaggcacccgccaccatacctggctaattttctttttttttttttgagacaaagtcttgctcttgtcccccagtctggagtgcaatggcacgatctcggctcactgcaacctccgcttcccaggttcatgcaattctcctgcctcagcctcccgagtagctgggattacaggcacataccaccacgcccagctagtttttcgtattttaagtagagacagggtttcaccatgttggccaggctggtctcaaactcctgacctcaggtgatctgtctgcctcggcctcccaaagtgctgtgattacaggcatgag >DB070673:1-552 (+) tcttgaactcctgacctcaggtgatccgcccacctcagcctcccaaggtgctgggattacggctgtgagccaccgcgcccagccctggcctctttttttaagttatttatttatttttgagacagagtctcactctgtcgcccaggctgtggtgcagtggcatggtcttggttcactgcagcctctgcctcctgggttcaagtgattctcctgcctcagcctctggagtaggtgggattacgggcacccgccaccatacctggctaattttcttttttttttt--gagacaaagtcttgctcttgtcccccagtctggagtgcagtggcgcgatctcggctcactgcagcctccgcttcccgggttcgtgcggttctcctgcctcggcctcccgagtggctgggattgcaggcacgtaccaccatgcccggctagtttttcgtgttttgggtggaggcggggtttcaccatgttggccaggctggtctcgggctcctgacctcaggtgatctgtctgcctcggcctcccagagtgctgtgattacaggcgtggg End editing Edited EST: DW414281, type: ag Aligns to: chr19:39943227-39943528 (++) All mismatches: ag (15), ag (16), ag (159), ag (175), ag (181), ag (182), ag (187), ag (222), ag (227), ag (241), ag (250), ag (251), ag (259), ag (276), ag (281), ag (288), ag (292), ag (296), ag (312), Editing mismatches: 19, all mismatches: 19, alignment length: 301, cluster length: 299, total number of As: 85 Locations in RNA: 15 16 159 175 181 182 187 222 227 241 250 251 259 276 281 288 292 296 312 Locations in genome: 39943228 39943229 39943373 39943389 39943395 39943396 39943401 39943436 39943441 39943455 39943464 39943465 39943473 39943490 39943495 39943502 39943506 39943510 39943526 Upstream nucleotide (in genome): g a c c t a c g c c c a g a a a t c c Upstream nucleotide summary: a: 6, c: 8, g: 3, t: 2, other: 0 Downstream nucleotide (in genome): a t g c a t g g a g a c a a t a g g c Downstream nucleotide summary: a: 7, c: 3, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 3, ca: 2, cc: 2, cg: 4, ct: 0, ga: 2, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr19:39943227-39943528 (+) gaattagcaacaggggtggccagtgatcttcgtgagcagtgtggactagaaacagagatgggagtcactgtcacagagatgtccaccaccgccaagggagaggacgagatggccttggggagttgtagaatgggaagagatgggccaggtgctgtggctcacacctgtaatcccagcattttcggaggcagaggcggatggatcacctgaggtcaagagttcgagaccagcctggccaacatggtgaagccacgtgtctactaaaaaaatacaaaaattagccaggtgtggtggcgcacacc >DW414281:14-314 (+) ggg-tagcaacaggggtggccagtgatcttcgtgagcagtgtggactagaaacagagatgggagtcactgtcacagagatgtccaccaccgccaagggagaggacgagatggccttggggagttgtagaatgggaagagatgggccgggtgctgtggctcacgcctgtggtcccggcattttcggaggcagaggcggatggatcacctggggtcgagagttcgagaccggcctggccggcatggtggagccacgtgtctactagaaaagtacaaagattggccgggtgtggtggcgcacgcc End editing Edited EST: DW432326, type: ag Aligns to: chr19:5630570-5630779 (++) All mismatches: ag (38), ag (52), ag (55), ag (58), ag (62), ag (94), ag (103), ag (108), ag (110), ag (125), ag (126), ag (134), ag (135), ag (143), ag (166), ag (169), ag (174), ag (213), Editing mismatches: 18, all mismatches: 18, alignment length: 211, cluster length: 176, total number of As: 47 Locations in RNA: 38 52 55 58 62 94 103 108 110 125 126 134 135 143 166 169 174 213 Locations in genome: 5630591 5630605 5630608 5630611 5630615 5630647 5630656 5630661 5630663 5630678 5630679 5630687 5630688 5630696 5630719 5630722 5630727 5630766 Upstream nucleotide (in genome): a t a t a a t g g a a g a a g c c c Upstream nucleotide summary: a: 8, c: 3, g: 4, t: 3, other: 0 Downstream nucleotide (in genome): c a a c a t c g g a t a c g t c c a Downstream nucleotide summary: a: 6, c: 6, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 1, at: 2, ca: 1, cc: 2, cg: 0, ct: 0, ga: 1, gc: 0, gg: 2, gt: 1, ta: 1, tc: 2, tg: 0, tt: 0, other: 0 >chr19:5630570-5630779 (+) cagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattatctgggtgtggtggcaagcgcctgtaatcctagctacttgagaggctgaggcaggaaaatcgcttgaacccgggaagcagaggttgcagtgagccgagatcacgccactgcactccagcctgggcgacgagtgaagcttcgtctca-aaaaaaaaaaaaa >DW432326:17-227 (+) cagcctggccaacatggtgaagccctgtctctactgaagatgcaagaattatctgggtgtggtggcaagcgcctgtagtcctagctgcttggggggctgaggcaggaaggtcgcttgggcccgggaggcagaggttgcagtgagccgaggtcgcgccgctgcactccagcctgggcgacgagtgaagcttcgtctcgtaaaaaaaaaaaaa End editing Edited EST: DW440345, type: ag Aligns to: chr19:13267413-13267782 (++) All mismatches: ag (168), ag (183), ag (206), ag (207), ag (215), ag (217), ag (222), ag (231), ag (246), ag (272), ag (273), ag (294), ag (298), ag (313), ag (317), ag (320), ag (324), ta (354), ag (379), Editing mismatches: 18, all mismatches: 19, alignment length: 370, cluster length: 212, total number of As: 62 Locations in RNA: 168 183 206 207 215 217 222 231 246 272 273 294 298 313 317 320 324 379 Locations in genome: 13267562 13267577 13267600 13267601 13267609 13267611 13267616 13267625 13267640 13267666 13267667 13267688 13267692 13267707 13267711 13267714 13267718 13267773 Upstream nucleotide (in genome): c c c a g a c t t t a g c a c g c g Upstream nucleotide summary: a: 4, c: 7, g: 4, t: 3, other: 0 Downstream nucleotide (in genome): g g a c a c t a g a t g g c g g g a Downstream nucleotide summary: a: 5, c: 3, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 3, ag: 0, at: 1, ca: 1, cc: 0, cg: 5, ct: 1, ga: 2, gc: 0, gg: 2, gt: 0, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chr19:13267413-13267782 (+) acacacaggccacacagataattcggtaccagaaacatgatgctgagtgacaaaggccagctgcagaagtcaggtaagaagcacatattctgggccgggcatggtggctcatgcctgtaatcccagcactttggaaggctgaggtgggcagctcacctgaggtcaggagttcgagaccagcctgatcaacatggtgaaaccccatctctactaaaaatacaaaaattagctaggcaaggtggcaggcgcctgtaatcccagctatccgaaggctgaggcaggagaatcacttgaactcaggaggcagaggttgcagtgagccgagatggtgtcactgcactccagcctgggctacagaggaagactctgt >DW440345:19-388 (+) acacacaggccacacagataattcggtaccagaaacatgatgctgagtgacaaaggccagctgcagaagtcaggtaagaagcacatattctgggccgggcatggtggctcatgcctgtaatcccagcactttggaaggctgaggtgggcggctcacctgaggtcgggagttcgagaccagcctgatcggcatggtggagccccgtctctactgaaaatacaaaaattggctaggcaaggtggcaggcgcctgtggtcccagctatccgaaggctggggcgggagaatcacttgagctcggggggcggaggttgcagtgagccgagatggtgtcacagcactccagcctgggctacagagggagactctgt End editing Edited EST: DW465615, type: ag Aligns to: chr19:18290271-18290609 (++) All mismatches: ag (18), ag (45), ag (46), ag (114), ag (159), ag (173), ag (181), ag (182), ag (198), ag (204), ag (217), ag (220), ag (233), ag (249), ag (251), ag (257), ag (258), ag (259), ag (270), ag (273), ag (276), ag (284), ag (289), ag (305), ag (315), ag (321), ag (325), ag (342), ag (345), ag (346), ag (356), Editing mismatches: 31, all mismatches: 31, alignment length: 339, cluster length: 339, total number of As: 93 Locations in RNA: 18 45 46 114 159 173 181 182 198 204 217 220 233 249 251 257 258 259 270 273 276 284 289 305 315 321 325 342 345 346 356 Locations in genome: 18290271 18290298 18290299 18290367 18290412 18290426 18290434 18290435 18290451 18290457 18290470 18290473 18290486 18290502 18290504 18290510 18290511 18290512 18290523 18290526 18290529 18290537 18290542 18290558 18290568 18290574 18290578 18290595 18290598 18290599 18290609 Upstream nucleotide (in genome): n t a a c c t a g g c a c a c g a a t t a a t c t c t c g a g Upstream nucleotide summary: a: 10, c: 8, g: 5, t: 7, other: 1 Downstream nucleotide (in genome): g a t a g c a t g g c g a c c a a c c a a a g g g g c g a a n Downstream nucleotide summary: a: 11, c: 7, g: 10, t: 2, other: 1 Dinucleotide summary: aa: 5, ac: 2, ag: 1, at: 2, ca: 1, cc: 3, cg: 4, ct: 0, ga: 2, gc: 0, gg: 2, gt: 0, ta: 3, tc: 2, tg: 2, tt: 0, other: 2 >chr19:18290271-18290609 (+) aggctggatgcggtgtctcacacctgtaatcccagcactttgggaggcccaggcaggcagatcacctaaggtcagaagtttgagaccagcctggcaaacatggcaaaaccctgtctctactaaaaaatacaaaagttggtcaggcgcggtggctcacgcctgtaatctcagcactttgggaggccgaggcgggtggatcacaaggtcaggagatcaagtccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaactagctgggcgtggtggcaggcacctgtagtcccagctactcgggaggctgaggcaggaaaatggcgtga >DW465615:18-356 (+) gggctggatgcggtgtctcacacctgtggtcccagcactttgggaggcccaggcaggcagatcacctaaggtcagaagtttgagaccagcctggcagacatggcaaaaccctgtctctactaaaaaatacaaaagttggtcgggcgcggtggctcgcgcctgtggtctcagcactttggggggccggggcgggtggatcgcagggtcaggagatcgagtccatcctggctagcgcggtggggccccgtctctgctgaagatacaaagaactggctgggcgtggtggcgggcacctgtggtcccggctgctcgggaggctgaggcgggggaatggcgtgg End editing Edited EST: DW467181, type: ag Aligns to: chr19:39887020-39887358 (++) All mismatches: ag (10), ag (11), ag (14), ag (16), ag (85), ag (101), ag (108), ag (123), ag (137), ag (140), tc (144), ag (145), ag (154), ag (169), ag (171), ag (194), ag (199), ag (208), ag (212), ag (224), ag (228), Editing mismatches: 20, all mismatches: 21, alignment length: 338, cluster length: 220, total number of As: 66 Locations in RNA: 10 11 14 16 85 101 108 123 137 140 145 154 169 171 194 199 208 212 224 228 Locations in genome: 39887020 39887021 39887025 39887027 39887096 39887112 39887119 39887134 39887148 39887151 39887156 39887165 39887180 39887182 39887205 39887210 39887219 39887223 39887235 39887239 Upstream nucleotide (in genome): n a a g a t a c c g t g a t a t t c c c Upstream nucleotide summary: a: 6, c: 5, g: 3, t: 5, other: 1 Downstream nucleotide (in genome): a c g t g a c a c g g g t t a c g g t c Downstream nucleotide summary: a: 4, c: 5, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 2, at: 1, ca: 1, cc: 2, cg: 1, ct: 1, ga: 0, gc: 0, gg: 2, gt: 1, ta: 1, tc: 1, tg: 2, tt: 1, other: 1 >chr19:39887020-39887358 (+) aaccaagatggcgccactgcactccagcctgggtaacagagcgagactgtctccaaaaaaaaaggggccgggcacaagtggctcatgcctgtaatcccaacactttgggatgccaaggcgggtagatcacgaggttaggagttcgagaccagcctggccaatatggtgaaatcccgtctctactaaaaatacaaaaattagccaggcttggtggcatgcacctgaagtgccagctcctctggaggctgaggcagaagaatcacttgaacccaggaggcagaggttgcagtgagccaagatcgtgctactgcactccagcctgggcaacagagcgagatt >DW467181:10-347 (+) ggcc-gggtggcgccactgcactccagcctgggtaacagagcgagactgtctccaaaaaaaaaggggccgggcacaggtggctcatgcctgtgatcccagcactttgggatgccgaggcgggtagatcgcggggtcgggagttcgggaccagcctggccagtgtggtgaaatcccgtctctactagaaatgcaaaaattggccgggcttggtggcgtgcgcctgaagtgccagctcctctggaggctgaggcagaagaatcacttgaacccaggaggcagaggttgcagtgagccaagatcgtgctactgcactccagcctgggcaacagagcgagatt End editing Edited EST: C14388, type: ag Aligns to: chr19:56094113-56094399 (++) All mismatches: ag (63), ag (68), ag (87), ag (111), ag (128), ag (135), ag (141), ag (145), ag (151), ag (157), ag (165), ag (167), ag (168), ag (194), ag (209), Editing mismatches: 15, all mismatches: 15, alignment length: 287, cluster length: 147, total number of As: 48 Locations in RNA: 63 68 87 111 128 135 141 145 151 157 165 167 168 194 209 Locations in genome: 56094175 56094180 56094199 56094223 56094240 56094247 56094253 56094257 56094263 56094269 56094277 56094279 56094280 56094306 56094321 Upstream nucleotide (in genome): c c a a a a t c t c t t a c a Upstream nucleotide summary: a: 6, c: 5, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g c g a g a g g a c t a t g c Downstream nucleotide summary: a: 4, c: 3, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 2, at: 1, ca: 0, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 1, tt: 1, other: 0 >chr19:56094113-56094399 (+) aaggaggccaagcatggtggctcacgcctgtaatctcagcactttgggaggcccaggtgggcagatcacctgaggccaggagttcaagaccagcctggcccacatggtgaaaccccatctctacaaaaggtacaaaaattagccaggcataatggcacatgcctataatcccagctactcaggaggctgaggcaggagaatggcttgaacctgggaggcagaggttgcagtgcgctgagatcgtgccattgcactccagcctgggcaacagagcaaaactccacctc >C14388:1-287 (+) aaggaggccaagcatggtggctcacgcctgtaatctcagcactttgggaggcccaggtgggcggatcgcctgaggccaggagttcaggaccagcctggcccacatggtgagaccccatctctacaaagggtacagaaattggccgggcatgatggcgcatgcctgtggtcccagctactcaggaggctgaggcgggagaatggcttgagcctgggaggcagaggttgcagtvcgctgagatcgtgccattgcactccagcctgggcaacagagcaaaactccacctc End editing Edited EST: BM706627, type: ag Aligns to: chr19:11935427-11935966 (++) All mismatches: ac (74), ag (130), ag (133), ag (168), ag (210), ag (233), ag (288), ag (297), ag (305), ag (310), ag (353), ag (358), ag (368), ag (380), Editing mismatches: 13, all mismatches: 14, alignment length: 542, cluster length: 251, total number of As: 53 Locations in RNA: 130 133 168 210 233 288 297 305 310 353 358 368 380 Locations in genome: 11935546 11935549 11935584 11935626 11935649 11935704 11935713 11935721 11935726 11935769 11935774 11935784 11935796 Upstream nucleotide (in genome): t a c c g t g c t c c a t Upstream nucleotide summary: a: 2, c: 5, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): g t t a g g g c t c g g c Downstream nucleotide summary: a: 1, c: 3, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 1, cc: 2, cg: 1, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 1, tg: 2, tt: 1, other: 0 >chr19:11935427-11935966 (+) tatttagaacagtggttgtttccccaaaacattgggcagataatccacagagttccagcatttttattccaggctcatagttccccccaccaccc--tttttttttttttttttttgagatagaatcttgctctgttgcccaggctggagtgcagtggcatgatctcggctcactgcaacctccgcctcctgggttctagcaatccttctgcctcagcctcccgagtagctgggaatacaggcgcacaccaccacacccaactaatttctgtattttttagtagagagagggtttcaccatattgaccaggctggtctcaaactcctgaccttgtgattcgcccacctcagcctcccaaagtgctgggattacaggcgtgagccaccgtacccagcatagttccccctattctaaacatcttgactggccaggtgctgagccttatacctgtaatcctaccacttaggtaggccaaagcagcaggacagcttggactcgggagttggaggccagcctaggcaacatagcaagaccctgtttc >BM706627:9-550 (+) tatttagaacagtggttgtttccccaaaacattgggcagataatccacagagttccagcatttttcttccaggctcatagttccccccaccaccctttttttttttttttttttttgagatggagtcttgctctgttgcccaggctggagtgcagtggcgtgatctcggctcactgcaacctccgcctcctgggttctagcgatccttctgcctcagcctcccgggtagctgggaatacaggcgcacaccaccacacccaactaatttctgtattttttggtagagagggggtttcgccatgttgaccaggctggtctcaaactcctgaccttgtgattcgcccgcctcggcctcccaaggtgctgggattgcaggcgtgagccaccgtacccagcatagttccccctattctaaacatcttgactggccaggtgctgagccttatacctgtaatcctaccacttaggtaggccaaagcagcaggacagcttggactcgggagttggaggccagcctaggcaacatagcaagaccctgtttc End editing Edited EST: BF112270, type: ga Aligns to: chr19:16437663-16437839 (++) All mismatches: ga (110), ga (113), ga (149), ga (157), ga (163), ga (165), ga (173), ga (181), ga (183), ga (192), ga (202), ga (204), ga (210), ga (211), ga (229), ga (231), ga (233), ga (237), ga (239), ga (247), ga (249), ga (254), ga (263), ga (265), ga (268), ga (279), Editing mismatches: 26, all mismatches: 26, alignment length: 177, cluster length: 170, total number of Gs: 49 Locations in RNA: 110 113 149 157 163 165 173 181 183 192 202 204 210 211 229 231 233 237 239 247 249 254 263 265 268 279 Locations in genome: 16437663 16437666 16437702 16437710 16437716 16437718 16437726 16437734 16437736 16437745 16437755 16437757 16437763 16437764 16437782 16437784 16437786 16437790 16437792 16437800 16437802 16437807 16437816 16437818 16437821 16437832 Upstream nucleotide (in genome): n a c a c c c c c c c g c g t t c c t c c c g c t c Upstream nucleotide summary: a: 2, c: 16, g: 3, t: 4, other: 1 Downstream nucleotide (in genome): c g g t c c a c c a g c g c t c a t c c c a c c c g Downstream nucleotide summary: a: 4, c: 14, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 4, cc: 7, cg: 4, ct: 1, ga: 0, gc: 3, gg: 0, gt: 0, ta: 0, tc: 3, tg: 0, tt: 1, other: 1 >chr19:16437663-16437839 (+) gcaggtgagaagccctaccactgcaactgggacggctgcggctggaagtttgcgcgctcagacgagctcacgcgccactaccgaaagcacacgggccaccggccattccagtgccatctgtgcgatcgtgccttctcgcgctccgatcacctggcgctgcacatgaaacggcacatg >BF112270:110-286 (+) acaagtgagaagccctaccactgcaactgggacggctgcagctggaaatttgcacactcagacaagctcacacaccactaccaaaagcacacagaccaccaaccattccagtgccatctatacaatcataccttctcacactccaatcacctgacactacacatgaaacagcacatg End editing Edited EST: AW236197, type: ga Aligns to: chr19:855587-855795 (++) All mismatches: ga (34), ga (121), ga (131), ga (145), ga (156), ga (159), ga (167), ga (181), ga (183), ga (190), ga (194), ga (198), ga (200), ga (204), ga (209), Editing mismatches: 15, all mismatches: 15, alignment length: 209, cluster length: 176, total number of Gs: 69 Locations in RNA: 34 121 131 145 156 159 167 181 183 190 194 198 200 204 209 Locations in genome: 855620 855707 855717 855731 855742 855745 855753 855767 855769 855775 855779 855783 855786 855790 855795 Upstream nucleotide (in genome): a a c c c c c t a c a c c t c Upstream nucleotide summary: a: 4, c: 9, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g g t t t c t a g g g g t t n Downstream nucleotide summary: a: 1, c: 1, g: 6, t: 6, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 4, at: 0, ca: 0, cc: 1, cg: 2, ct: 5, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 1, other: 1 >chr19:855587-855795 (+) cgccaacgtgcaggtggcccagctgccggctcagggacgccgcctgggcaacggggtgcagtgcctggccatgggctggggccttctgggcaggaaccgtgggatcgccagcgtcctgcaggagctcaacgtgacggtggtgacgtccctctgccgtcgcagcaacgtctgcactctcgtgaggggcc-ggcaggccggcgtctgtttcg >AW236197:1-209 (+) cgccaacgtgcaggtggcccagctgccggctcaaggacgccgcctgggcaacggggtgcagtgcctggccatgggctggggccttctgggcaggaaccgtgggatcgccagcgtcctgcaagagctcaacatgacggtggtgacatccctctgccatcacagcaacatctgcactctcgtaaagggcccagcaagcca-catctatttca End editing Edited EST: BE046169, type: ga Aligns to: chr19:39306062-39306358 (++) All mismatches: ga (34), ga (53), ga (119), ga (142), ga (144), ga (149), ga (158), ga (167), ga (182), ga (184), ga (202), ga (207), ga (213), ga (238), ga (240), ga (241), ga (245), ga (246), ga (250), ga (258), ga (260), ga (266), ga (268), ga (272), ga (279), ga (285), ga (292), ga (295), Editing mismatches: 28, all mismatches: 28, alignment length: 297, cluster length: 262, total number of Gs: 81 Locations in RNA: 34 53 119 142 144 149 158 167 182 184 202 207 213 238 240 241 245 246 250 258 260 266 268 272 279 285 292 295 Locations in genome: 39306095 39306114 39306180 39306203 39306205 39306210 39306219 39306228 39306243 39306245 39306263 39306268 39306274 39306299 39306301 39306302 39306306 39306307 39306311 39306319 39306321 39306327 39306329 39306333 39306340 39306346 39306353 39306356 Upstream nucleotide (in genome): a a c t a g c g c c g a c c t g t g c c a t g t t t g c Upstream nucleotide summary: a: 5, c: 9, g: 7, t: 7, other: 0 Downstream nucleotide (in genome): a a c a g a g c c a a g g t g c g a a a g g t c c t a c Downstream nucleotide summary: a: 10, c: 7, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 3, at: 0, ca: 3, cc: 3, cg: 2, ct: 1, ga: 4, gc: 2, gg: 0, gt: 1, ta: 1, tc: 2, tg: 3, tt: 1, other: 0 >chr19:39306062-39306358 (+) ttctttactttgctttattgtttgtggggtgaagataaggccttgggcttgagaaactcattgtcataaagttataaactgggaaactgggtcagaaggcatagaaacaactgtcatcgcccatcctccctttctgtggatgaggcgggacaaggccggccccctggctggggcctgggacgcgagggctctcagagcttggagaaggtgacggttttcagttccttgttctcagtcgtggcctggaccgacttcacgaggtcttgggtctgcagcatgctcatgttccaggacgcc >BE046169:1-297 (+) ttctttactttgctttattgtttgtggggtgaaaataaggccttgggcttgaaaaactcattgtcataaanttataaactgggaaactgggtcagaaggcatanaaacaactgtcatcacccatcctccctttctgtggataaagcggaacaaggccagccccctgactggggcctgggacacaagggctctcanancttgaagaaagtgacagttttcagttccttgttctcagtcataacctaaaccaacttcacaaagtcttagatctacagcatactcatattccagaacacc End editing Edited EST: BE046173, type: ga Aligns to: chr19:48766158-48766448 (++) All mismatches: ga (109), ga (140), ga (152), ga (177), ga (181), ga (184), ga (186), ga (198), ga (213), ga (229), ga (232), ga (260), ga (261), ga (281), ga (288), ga (291), ga (292), Editing mismatches: 17, all mismatches: 17, alignment length: 292, cluster length: 183, total number of Gs: 43 Locations in RNA: 109 140 152 177 181 184 186 198 213 229 232 260 261 281 288 291 292 Locations in genome: 48766266 48766297 48766309 48766334 48766338 48766341 48766343 48766355 48766370 48766386 48766389 48766417 48766418 48766438 48766444 48766447 48766448 Upstream nucleotide (in genome): c a c a c t a a t c a t g t t g g Upstream nucleotide summary: a: 5, c: 4, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): g a a g t a a g a a g g a a a g n Downstream nucleotide summary: a: 9, c: 0, g: 6, t: 1, other: 1 Dinucleotide summary: aa: 2, ac: 0, ag: 3, at: 0, ca: 2, cc: 0, cg: 1, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 4, tc: 0, tg: 1, tt: 0, other: 1 >chr19:48766158-48766448 (+) agcttaaacaacagaatttattgtcatagttctggaggctgggaagtccaagatcaaggcactggtacattcagtgcctggagaggacctgcttccttgttcatagacggctgacttcttgctgcattctcccacagtagaaagcgggagcgaggtctctggggtctcttttctaagggcgttgagaccattcatgaggattccaccctcatgacctcatcacctcccgaaggccccatctcctcctatcatcatatttggagttaggatttcaacacgtgaacc-tgaggg >BE046173:1-292 (+) agcttaaacaacagaatttattgtcatagttctggaggctgggaagtccaagatcaaggcactggtacattcantgcctggagaggacctgcttccttgttcatanacagctgacttcttgctgcattctcccacantaaaaagcgggagcaaggtctctggggtctcttttctaaaggcattaaaaccattcatgaagattccaccctcataacctcatcacctcccaaaagccccatctcctcctatcatcatatttaaanttaggatttcaacacgtaaaccctaagaa End editing Edited EST: AA533775, type: ag Aligns to: chr19:12349165-12349459 (++) All mismatches: ga (6), cg (9), ag (27), ag (28), cg (30), ag (49), ag (64), ag (70), ag (71), ag (75), ag (93), ag (94), ag (103), ag (118), ag (131), ag (132), ag (133), ag (136), ag (162), ag (166), ag (171), ag (195), ag (215), ag (224), ag (232), ag (240), ag (262), ag (268), ag (270), ag (280), ag (281), ag (299), Editing mismatches: 29, all mismatches: 32, alignment length: 295, cluster length: 274, total number of As: 94 Locations in RNA: 27 28 49 64 70 71 75 93 94 103 118 131 132 133 136 162 166 171 195 215 224 232 240 262 268 270 280 281 299 Locations in genome: 12349186 12349187 12349209 12349224 12349230 12349231 12349235 12349253 12349254 12349263 12349278 12349291 12349292 12349293 12349296 12349322 12349326 12349331 12349355 12349375 12349384 12349392 12349400 12349422 12349428 12349430 12349440 12349441 12349459 Upstream nucleotide (in genome): t a a c c a g c a a t a a a c t c c a c c c c a g g c a a Upstream nucleotide summary: a: 12, c: 11, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): a t g a a g t a c a a a a t g g g g t g g a c c g g a a n Downstream nucleotide summary: a: 11, c: 3, g: 10, t: 4, other: 1 Dinucleotide summary: aa: 4, ac: 2, ag: 2, at: 3, ca: 5, cc: 1, cg: 5, ct: 0, ga: 0, gc: 0, gg: 2, gt: 1, ta: 2, tc: 0, tg: 1, tt: 0, other: 1 >chr19:12349165-12349459 (+) ggcgcgg-tagctcacgcctgtaatcctagcactttgggaggccaaggcgggcggaccacaaggtcaagagatcaagactatcctggccaacatggtgaaaccctgtctctactaaaaataccaaaaaaatcagctgggcgtggtggcacgtgcctgtagtcagagcagctcgggaggttgaggcagtagaattgcctgaacccgggagacagaggttgcagtgagccaagatcacaccactgcactccagcctggcaacagagagagactgtctcaaaaaaaaaaaaaaaaaaaa >AA533775:5-299 (+) gacggggctagctcacgcctgtggtgctagcactttgggaggcc-gggcgggcggaccacgaggtcgggaggtcaagactatcctggccggcatggtgagaccctgtctctactgaaaataccaaaagggtcggctgggcgtggtggcacgtgcctgtggtcggagcggctcgggaggttgaggcagtagagttgcctgaacccgggagacggaggttgcggtgagccgagatcacgccactgcactccagcctggcagcagagggggactgtctcggaaaaaaaaaaaaaaaaag End editing Edited EST: DB289493, type: ag Aligns to: chr1:12084480-12085047 (++) All mismatches: ag (35), ag (40), ag (48), ag (72), ag (96), ag (121), ag (131), ag (133), ag (166), ag (172), ag (201), ag (251), Editing mismatches: 12, all mismatches: 12, alignment length: 568, cluster length: 217, total number of As: 42 Locations in RNA: 35 40 48 72 96 121 131 133 166 172 201 251 Locations in genome: 12084514 12084519 12084527 12084551 12084575 12084600 12084610 12084612 12084645 12084651 12084680 12084730 Upstream nucleotide (in genome): c t a a g t t c t t c a Upstream nucleotide summary: a: 3, c: 3, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g g t c t g c g t g g g Downstream nucleotide summary: a: 0, c: 2, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 1, ca: 0, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 1, tg: 3, tt: 1, other: 0 >chr1:12084480-12085047 (+) ttttttttgagatgaagtctcactcttgtcatccaggctagagtgcaatggcgtgatctccgctcactgcaacctccgcctcctgggttcaagcgattcacctgcctcagcgtcccgagtagctgggattacaggtgcctgccaccacacccggctaatttttgtatttttagtagagaaggggtttcaccatgttggccaggctggtctggaactgacctcaggcgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccactgctcccagccacatgtagcgttttttaagtggactgttaagcggcgtcaactatgtctacactgttgagctatcattactaccatccacctccagaactttttcatcttcccaaaaacttctctccccattaaataattactcccattccccctccctccagccctggacagtcaccattctactttctgtccctatgaatttgactcctctagggacctcatataagtgaaatcatatagcctttgttcttttgtactggcttattttatttaacataacggcctcaag >DB289493:1-568 (+) ttttttttgagatgaagtctcactcttgtcatccgggctggagtgcagtggcgtgatctccgctcactgcagcctccgcctcctgggttcaagcggttcacctgcctcagcgtcccgagtggctgggattgcgggtgcctgccaccacacccggctaatttttgtgtttttggtagagaaggggtttcaccatgttggccgggctggtctggaactgacctcaggcgatccgcccgcctcagcctcccaaggtgctgggattacaggcgtgagccactgctcccagccacatgtagcgttttttaagtggactgttaagcggcgtcaactatgtctacactgttgagctatcattactaccatccacctccagaactttttcatcttcccaaaaacttctctccccattaaataattactcccattccccctccctccagccctggacagtcaccattctactttctgtccctatgaatttgactcctctagggacctcatataagtgaaatcatatagcctttgttcttttgtactggcttattttatttaacataacggcctcaag End editing Edited EST: DW408597, type: ag Aligns to: chr1:46155211-46155537 (++) All mismatches: ag (47), ag (65), ag (71), ag (82), ag (87), ag (89), ag (92), ag (101), ag (104), ag (131), ag (138), ag (153), ag (163), ag (164), ag (165), ag (166), ag (169), ag (187), ag (195), ag (201), ag (205), ag (209), ag (218), ag (228), ag (233), ag (236), ag (250), ag (257), ag (261), ag (273), ag (281), ag (298), ag (303), ca (310), Editing mismatches: 33, all mismatches: 34, alignment length: 327, cluster length: 257, total number of As: 71 Locations in RNA: 47 65 71 82 87 89 92 101 104 131 138 153 163 164 165 166 169 187 195 201 205 209 218 228 233 236 250 257 261 273 281 298 303 Locations in genome: 46155241 46155259 46155265 46155276 46155281 46155283 46155286 46155295 46155298 46155325 46155332 46155347 46155357 46155358 46155359 46155360 46155363 46155381 46155389 46155395 46155399 46155403 46155412 46155422 46155427 46155430 46155444 46155451 46155455 46155467 46155475 46155492 46155497 Upstream nucleotide (in genome): c t c g c a c c g c a t a a a a g t t c t c g a c g a c g c c c c Upstream nucleotide summary: a: 8, c: 14, g: 6, t: 5, other: 0 Downstream nucleotide (in genome): c a g g a g g c g t a a a a a t g t g g c g g t t a g g g c c g a Downstream nucleotide summary: a: 9, c: 5, g: 14, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 2, at: 2, ca: 2, cc: 4, cg: 6, ct: 2, ga: 1, gc: 0, gg: 5, gt: 0, ta: 2, tc: 1, tg: 1, tt: 1, other: 0 >chr1:46155211-46155537 (+) atacaaaaaatacaaaaattggggccaggcacggtgcctaatgcctgtaatcccagcactttgggaggccaaagcaggcggatcacgaggtcaggagatcgagaccatcctaacatggtgaaactccgtctctactaaaaatacaaaaaatgagctgggcgtggtggcatatgcctgtagtcccagctactcaggaggctgaggcaggagaatggcatgaacctgggaggcgaagcttgcagtgagctgagatggcaccactgcactccaccctgggcgacagagcaagactccgtctcaaaaaaaaattggctgggcatggtggcg >DW408597:17-343 (+) atacaaaaaatacaaaaattggggccaggcgcggtgcctaatgcctgtgatcccggcactttggggggccgaggcgggcggatcgcggggtcaggagatcgagaccatcctaacgtggtgagactccgtctctactgaaaatacaaggggtgggctgggcgtggtggcatgtgcctgtggtcccggctgctcgggaggctggggcaggagagtggcgtggacctgggaggcgaggcttgcggtgggctgagatggcgccactgcgctccancctgggcgacggagcgagactcagtctcaaaaaaaaattggctgggcatggtggcg End editing Edited EST: DW411831, type: ag Aligns to: chr1:244997297-244997607 (++) All mismatches: ag (17), ag (41), ag (51), ag (59), ag (115), ag (127), ag (137), ag (139), ag (164), tc (176), ag (178), ag (181), ag (198), ag (199), ag (220), ag (248), ag (256), ag (257), ag (269), ag (271), ac (311), Editing mismatches: 19, all mismatches: 21, alignment length: 311, cluster length: 255, total number of As: 46 Locations in RNA: 17 41 51 59 115 127 137 139 164 178 181 198 199 220 248 256 257 269 271 Locations in genome: 244997297 244997321 244997331 244997339 244997395 244997407 244997417 244997419 244997444 244997458 244997461 244997478 244997479 244997500 244997528 244997536 244997537 244997549 244997551 Upstream nucleotide (in genome): n c t c c t t c a t t c a a c a a t c Upstream nucleotide summary: a: 5, c: 7, g: 0, t: 6, other: 1 Downstream nucleotide (in genome): g g c c g g c g t g g a g c g a g c g Downstream nucleotide summary: a: 2, c: 5, g: 11, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 1, ca: 1, cc: 1, cg: 5, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 3, tg: 3, tt: 0, other: 1 >chr1:244997297-244997607 (+) agacggagtttcgctctttctcccaggctggagtacagtggcacgatctcggctccctgcaacctccgccttccgttttcaagctattctccttcctcaggctgccgagtagctgggattacaggcgccccccaccacgccaggctaatttttgtatttttagtagaggcgaggtttcaccaagttgaccaggctggtcccgaactcctgacctcgtgatccgcccgcctcagcccccaaagtgttgggattacaggcgtgagcctccgcgcccggcacagtatgtagtttctaactacaatttcaaaaac >DW411831:17-327 (+) ggacggagtttcgctctttctcccgggctggagtgcagtggcgcgatctcggctccctgcaacctccgccttccgttttcaagctattctccttcctcgggctgccgagtggctgggattgcgggcgccccccaccacgccaggctagtttttgtatttctggtggaggcgaggtttcaccgggttgaccaggctggtcccgagctcctgacctcgtgatccgcccgcctcggcccccagggtgttgggattgcgggcgtgagcctccgcgcccggcacagtatgtagtttctacctacaatttcaaaaac End editing Edited EST: DW411994, type: ag Aligns to: chr1:201495083-201495392 (++) All mismatches: ag (87), ag (103), ag (123), ag (137), ag (160), ag (174), ag (212), ag (213), ag (221), ag (223), ag (234), ag (241), ag (243), ag (246), ag (252), ag (253), ag (278), ag (279), ta (280), ag (288), ag (300), ag (301), ag (305), ag (308), ag (324), Editing mismatches: 24, all mismatches: 25, alignment length: 310, cluster length: 238, total number of As: 72 Locations in RNA: 87 103 123 137 160 174 212 213 221 223 234 241 243 246 252 253 278 279 288 300 301 305 308 324 Locations in genome: 201495153 201495169 201495189 201495203 201495226 201495240 201495278 201495279 201495287 201495289 201495300 201495307 201495309 201495312 201495318 201495319 201495344 201495345 201495354 201495366 201495367 201495371 201495374 201495390 Upstream nucleotide (in genome): c t g c g c c a g a t a t a t a t a t t a c g c Upstream nucleotide summary: a: 7, c: 6, g: 4, t: 7, other: 0 Downstream nucleotide (in genome): g t c c g g a c a c c t c a a c a t c a g g g g Downstream nucleotide summary: a: 6, c: 8, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 1, at: 2, ca: 1, cc: 1, cg: 4, ct: 0, ga: 1, gc: 1, gg: 2, gt: 0, ta: 3, tc: 3, tg: 0, tt: 1, other: 0 >chr1:201495083-201495392 (+) gggagaccaaggcaggcagctcatttgaggtcaggaattcaaaaccagcctggacaatttggtgaaacccagtctctactaaaaatataaaattagccagagctggacgtggtggctcacacctgtaatcccagcactttgggaggctgaagtgggcagatcacctgaggtcaggagtttgagactagcatggccaacatggtgaaaccctgtctctactaaaaatacaaaaattaaccaggagtggtggtgggtgcctgtaatctcagttactggggaggctaaggcaggagaatcatttgaacccagg >DW411994:17-326 (+) gggagaccaaggcaggcagctcatttgaggtcaggaattcaaaaccagcctggacaatttggtgaaacccggtctctactaaaaatgtaaaattagccagagctgggcgtggtggctcacgcctgtaatcccagcactttggggggctgaagtgggcggatcacctgaggtcaggagtttgagactagcatggccggcatggtggagccctgtctctgctaaaagtgcagaaattggccaggagtggtggtgggtgcctgtggactcagttgctggggaggctggggcgggggaatcatttgaacccggg End editing Edited EST: DW415176, type: ag Aligns to: chr1:213352441-213352737 (++) All mismatches: ag (51), ag (101), ag (109), ag (119), ag (124), ag (132), ag (133), ag (143), ag (147), ag (163), ag (176), ag (178), ag (187), ag (213), ag (214), ag (219), ag (223), ag (254), ag (255), ta (287), ag (291), Editing mismatches: 20, all mismatches: 21, alignment length: 297, cluster length: 241, total number of As: 59 Locations in RNA: 51 101 109 119 124 132 133 143 147 163 176 178 187 213 214 219 223 254 255 291 Locations in genome: 213352475 213352525 213352533 213352543 213352548 213352556 213352557 213352567 213352571 213352587 213352600 213352602 213352611 213352637 213352638 213352643 213352647 213352678 213352679 213352715 Upstream nucleotide (in genome): t g c g c c a t c c a t t t a c t g a c Upstream nucleotide summary: a: 4, c: 7, g: 3, t: 6, other: 0 Downstream nucleotide (in genome): g g g g g a g g a t t c g a t g c a c c Downstream nucleotide summary: a: 4, c: 4, g: 9, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 2, ca: 2, cc: 1, cg: 3, ct: 1, ga: 1, gc: 0, gg: 2, gt: 0, ta: 1, tc: 2, tg: 3, tt: 0, other: 0 >chr1:213352441-213352737 (+) tataacatattcctgtgaaaacataagtaggtataggccgggagctgtggctcatgcctgtaatcccagcactttgggaggccgaggcgggcagatcacctgaggtcaggagttcaagactagcctagccaatatggggaaaccccatctctactagaaatacagaaattagctgggcattgcggtgggcgcctgtaatcccagctactcgggaggctgaggcaggagaattgtgtgaacccgggaggtggaggttgcagcgagccaagattgcaccactgcattccagcctgggca >DW415176:17-313 (+) tataacatattcctgtgaaaacataagtaggtatgggccgggagctgtggctcatgcctgtaatcccagcactttgggaggccggggcgggcggatcacctggggtcgggagttcgggactagcctggccgatatggggaaaccccgtctctactagaagtgcagaaattggctgggcattgcggtgggcgcctgtggtcccggctgctcgggaggctgaggcaggagaattgtgtgggcccgggaggtggaggttgcagcgagccaagaatgcgccactgcattccagcctgggca End editing Edited EST: DW422625, type: ag Aligns to: chr1:145644401-145644659 (++) All mismatches: ag (38), ag (42), ag (47), ag (57), ag (71), ag (77), ag (88), ag (89), ag (90), ag (91), ag (114), ag (119), ag (127), ag (135), ag (143), ag (146), ag (155), ag (172), ag (195), Editing mismatches: 19, all mismatches: 19, alignment length: 259, cluster length: 158, total number of As: 46 Locations in RNA: 38 42 47 57 71 77 88 89 90 91 114 119 127 135 143 146 155 172 195 Locations in genome: 145644403 145644407 145644412 145644422 145644436 145644442 145644453 145644454 145644455 145644456 145644479 145644484 145644492 145644500 145644508 145644511 145644520 145644537 145644560 Upstream nucleotide (in genome): c c c c c g t a a a a t c c t a t c a Upstream nucleotide summary: a: 6, c: 8, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g g c g g c a a a c a g t g t t c g g Downstream nucleotide summary: a: 4, c: 4, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 1, ca: 0, cc: 1, cg: 6, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 1, other: 0 >chr1:145644401-145644659 (+) gcaggcagatcacctgaggtcaggagttcgagaccagcctgaccaacatggtaaaaccccgtctctactaaaaatacaaaattagctgggcatggtggcaggtgcctataatcccagctacttgggaggctgaggcaggagaatggcttgagcctgggaagcagagattgcagtgagccaagaccgtgccattgcactccagcttgggcagcaagagcgaaactctgtcttaaaaaaaaaaggccgggcgcagtggctc >DW422625:36-294 (+) gcgggcggatcgcctgaggtcgggagttcgagaccggcctggccaacatggtggggccccgtctctactaaaaatacagaattggctgggcgtggtggcgggtgcctgtagtcccagctgcttgggaggctgaggcgggagaatggcttgagcctgggaggcagagattgcagtgagccaagaccgtgccattgcactccagcttgggcagcaagagcgaaactctgtcttaaaaaaaaaaggccgggcgcagtggctc End editing Edited EST: DW424751, type: ag Aligns to: chr1:53344355-53344626 (++) All mismatches: ag (16), ag (17), ag (25), ag (52), ag (62), ag (70), ag (71), ag (77), ag (86), ag (111), ag (112), ag (113), ag (114), ag (125), ag (138), ag (141), ag (151), ag (152), ag (157), ag (161), ag (178), ag (184), ag (193), ag (200), ag (213), ag (214), ag (221), tc (244), ag (268), tg (281), Editing mismatches: 28, all mismatches: 30, alignment length: 272, cluster length: 253, total number of As: 75 Locations in RNA: 16 17 25 52 62 70 71 77 86 111 112 113 114 125 138 141 151 152 157 161 178 184 193 200 213 214 221 268 Locations in genome: 53344355 53344356 53344364 53344391 53344401 53344409 53344410 53344416 53344425 53344450 53344451 53344452 53344453 53344464 53344477 53344480 53344490 53344491 53344496 53344500 53344517 53344523 53344532 53344539 53344552 53344553 53344560 53344607 Upstream nucleotide (in genome): n a c c c c a a a a a a a t t c t a c t c a a g a a c g Upstream nucleotide summary: a: 13, c: 8, g: 2, t: 4, other: 1 Downstream nucleotide (in genome): a t c c g a g c c a a a t g g c a t g c g t c g a t a a Downstream nucleotide summary: a: 9, c: 7, g: 7, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 3, ag: 1, at: 5, ca: 2, cc: 3, cg: 3, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 1 >chr1:53344355-53344626 (+) aatcccagcactttgggaggccgaggtgggtggatcacctgaggtcagaagttcaagaccaacctggtcaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgggcatggtagcacatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacctgggaggtagagattgaaatgaaccaagatcgtgccactgcactccaattgcactccagcctgggcaacaagaacgaaactctgctcaaaaa >DW424751:16-287 (+) ggtcccagcgctttgggaggccgaggtgggtggatcgcctgaggtcggaagttcgggaccagcctggtcagcatggtgaaaccctgtctctactaggggtacaaaaattggctgggcatggtggcgcatgcctgtggtcccggctgcttgggaggctgaggcgggagagttgcttgagcctggggggtagagattgaggtgaaccgagatcgtgccactgcactccaactgcactccagcctgggcaacaaggacgaaactctgcgcaaaaa End editing Edited EST: DW425034, type: ag Aligns to: chr1:43864475-43864748 (++) All mismatches: ag (31), ag (61), ag (66), ag (68), ag (69), ag (74), ag (88), ag (97), ag (153), ag (163), ag (169), ag (173), ag (177), ag (180), ag (218), ag (219), ag (225), ag (229), ag (234), ag (247), ag (259), ag (266), Editing mismatches: 22, all mismatches: 22, alignment length: 274, cluster length: 236, total number of As: 66 Locations in RNA: 31 61 66 68 69 74 88 97 153 163 169 173 177 180 218 219 225 229 234 247 259 266 Locations in genome: 43864498 43864528 43864533 43864535 43864536 43864541 43864555 43864564 43864620 43864630 43864636 43864640 43864644 43864647 43864685 43864686 43864692 43864696 43864701 43864714 43864726 43864733 Upstream nucleotide (in genome): a c c c a c c c c t c t c g g a c g g t t c Upstream nucleotide summary: a: 3, c: 11, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): t g c a g g g a t g g c g g a g g g g c g g Downstream nucleotide summary: a: 3, c: 3, g: 14, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 1, ca: 2, cc: 1, cg: 7, ct: 1, ga: 1, gc: 0, gg: 3, gt: 0, ta: 0, tc: 2, tg: 2, tt: 0, other: 0 >chr1:43864475-43864748 (+) gggtgcggtggctcacgcctgtaatcccagcactttgggaggtggaggcgggcagatcacaaggtcaggagttcgagaccagcctggccaatatggtgaaccaccatctctattaaaaatacaaaaaatagccaggcatggtggcatgcccctgtagtcccagctactcaggaggctgaggtgggagaatcgcttgaactgagaaggcggaagttgcagtgagccgagattgcgccactacactccagcctaggcgacagagcgagactccgtc >DW425034:8-281 (+) gggtgcggtggctcacgcctgtagtcccagcactttgggaggtggaggcgggcggatcgcggggtcgggagttcgagaccggcctggccgatatggtgaaccaccatctctattaaaaatacaaaaaatagccaggcatggtggcgtgcccctgtggtcccggctgctcggggggctgaggtgggagaatcgcttgaactgagaaggcgggggttgcggtgggccgggattgcgccactgcactccagcctgggcgacggagcgagactccgtc End editing Edited EST: DW426094, type: ag Aligns to: chr1:179312981-179313252 (++) All mismatches: ag (14), ag (29), ag (30), ag (73), ag (76), ag (81), ag (82), ag (87), ag (99), ag (105), ag (107), ag (124), ag (127), ag (132), ag (133), ag (162), ag (163), ag (189), ag (195), ag (203), ag (204), ag (222), ag (270), ag (271), ca (274), Editing mismatches: 24, all mismatches: 25, alignment length: 270, cluster length: 259, total number of As: 68 Locations in RNA: 14 29 30 73 76 81 82 87 99 105 107 124 127 132 133 162 163 189 195 203 204 222 270 271 Locations in genome: 179312986 179313002 179313003 179313046 179313049 179313054 179313055 179313060 179313072 179313078 179313080 179313097 179313100 179313105 179313106 179313135 179313136 179313162 179313168 179313176 179313177 179313195 179313243 179313244 Upstream nucleotide (in genome): c t a c g c a c c g a a t a a t a c a g a t c a Upstream nucleotide summary: a: 10, c: 7, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): g a t g g a g g t a c a c a t a t g t a c c a g Downstream nucleotide summary: a: 8, c: 4, g: 7, t: 5, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 2, at: 4, ca: 2, cc: 0, cg: 4, ct: 1, ga: 2, gc: 0, gg: 1, gt: 0, ta: 2, tc: 2, tg: 0, tt: 0, other: 0 >chr1:179312981-179313252 (+) ggcgcagtggcttgcgcctgtaatcccagcactttgggaggcctaggtgggcagatcgcgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagcctggcgtggaggcacgtacctgtaatctcagctactcaggaggctgaggcaggagaattgcttgaacctgggatatggaggttacagtgagctgagatcactcctctgcactccagcctgggcgacagagcaagactccat >DW426094:10-279 (+) ggc-cgg-ggcttgcgcctgtggtcccagcactttgggaggcctaggtgggcagatcgcgaggtcgggggttcgggaccggcctggccaacgtggtggagccccatctctactaaagatgcaaaggttagcctggcgtggaggcacgtacctgtggtctcagctactcaggaggctgaggcgggagagttgcttgggcctgggatatggaggttgcagtgagctgagatcactcctctgcactccagcctgggcgacagagcgggaatccat End editing Edited EST: DW426817, type: ag Aligns to: chr1:29074371-29074604 (++) All mismatches: ag (98), ag (99), ag (104), ag (113), ag (115), ag (154), ga (213), ag (214), ag (229), ag (238), ag (242), ag (258), ag (267), Editing mismatches: 12, all mismatches: 13, alignment length: 233, cluster length: 171, total number of As: 48 Locations in RNA: 98 99 104 113 115 154 214 229 238 242 258 267 Locations in genome: 29074420 29074421 29074426 29074435 29074437 29074476 29074536 29074552 29074561 29074565 29074581 29074590 Upstream nucleotide (in genome): c a c a g a g a a c c a Upstream nucleotide summary: a: 6, c: 4, g: 2, t: 0, other: 0 Downstream nucleotide (in genome): a g g g c t g t c g g g Downstream nucleotide summary: a: 1, c: 2, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 3, at: 2, ca: 1, cc: 0, cg: 3, ct: 0, ga: 0, gc: 1, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr1:29074371-29074604 (+) ctcacgcctgtaagcacagcactttgggaggctgaggcgggcagatcacaaggtcaggagatcaagaccatcctggctaacatggtgaaaccccgtctctattaaataaactacaaaaaattagctgggtgtgatggtgggctcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccagggggcggagcttgcagtgagccaagatggcgccactgg >DW426817:49-281 (+) ctcacgcctgtaagcacagcactttgggaggctgaggcgggcagatcacggggtcgggagatcagggccatcctggctaacatggtgaaaccccgtctctattaagtaaactacaaaaaattagctgggtgtgatggtgggctcctgtagtcccagctactcggagg-ctgaggcaggagagtggcgtgagcccggggggcggagcttgcggtgagccaggatggcgccactgg End editing Edited EST: DW426916, type: ag Aligns to: chr1:15532426-15532689 (++) All mismatches: ag (54), ag (68), ag (69), ag (74), ag (77), ag (99), ag (118), ag (119), ag (123), ag (138), ag (142), ag (146), ag (164), ag (173), ag (174), ag (177), ag (209), ag (225), ag (257), ga (259), ag (262), ag (267), ag (278), Editing mismatches: 22, all mismatches: 23, alignment length: 264, cluster length: 225, total number of As: 57 Locations in RNA: 54 68 69 74 77 99 118 119 123 138 142 146 164 173 174 177 209 225 257 262 267 278 Locations in genome: 15532463 15532477 15532478 15532483 15532486 15532508 15532527 15532528 15532532 15532547 15532551 15532555 15532573 15532582 15532583 15532586 15532618 15532634 15532666 15532671 15532676 15532687 Upstream nucleotide (in genome): t t a c c c a a g a g g a a a t c g a t t c Upstream nucleotide summary: a: 8, c: 5, g: 4, t: 5, other: 0 Downstream nucleotide (in genome): g a t g c g a t g c g g g a a g g g g c a t Downstream nucleotide summary: a: 5, c: 3, g: 11, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 2, at: 2, ca: 0, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 4, gt: 0, ta: 2, tc: 1, tg: 2, tt: 0, other: 0 >chr1:15532426-15532689 (+) tcaacaagtcattttaaaagaaatgttcaggtccagtagctcatgcctggtaatcccagcactttgggaggctgaggcaggcagattgcttgagcccaggaaatcgagaccagcctgggcaacagagcgagaccctttctctacaaaagacgcaaaaaatagctggacatggtggtgtgtgcctgtagtcccagctcctcgggggccgaggtgggaggattgcttaagcctgggaggtcaagggtacagtaagccatgatcatg >DW426916:17-280 (+) tcaacaagtcattttaaaagaaatgttcaggtccagtggctcatgcctggtggtcccggcgctttgggaggctgaggcaggcggattgcttgagcccaggaggtcgggaccagcctgggcagcagggcgggaccctttctctacaaaggacgcaaaggatggctggacatggtggtgtgtgcctgtagtcccggctcctcgggggccggggtgggaggattgcttaagcctgggaggtcaggagtgcagtgagccatgatcgtg End editing Edited EST: DW427578, type: ag Aligns to: chr1:150364699-150364962 (++) All mismatches: ag (15), ag (27), ag (35), tc (40), ag (44), ag (59), ag (64), ag (65), ag (88), ag (110), ag (111), ag (119), ag (121), ag (126), ag (135), ag (145), ag (146), ag (150), ag (205), ag (209), ag (218), ag (222), gt (274), Editing mismatches: 21, all mismatches: 23, alignment length: 264, cluster length: 208, total number of As: 54 Locations in RNA: 15 27 35 44 59 64 65 88 110 111 119 121 126 135 145 146 150 205 209 218 222 Locations in genome: 150364699 150364711 150364719 150364728 150364743 150364748 150364749 150364772 150364794 150364795 150364803 150364805 150364810 150364819 150364829 150364830 150364834 150364889 150364893 150364902 150364906 Upstream nucleotide (in genome): n c c a g c a c c a g a c g a a t g a a c Upstream nucleotide summary: a: 8, c: 7, g: 4, t: 1, other: 1 Downstream nucleotide (in genome): g g c t g a g g a c a c t a a a g a t c g Downstream nucleotide summary: a: 7, c: 4, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 1, at: 2, ca: 2, cc: 1, cg: 3, ct: 1, ga: 3, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 1 >chr1:150364699-150364962 (+) aggggtgggtgcagtggctcacgcctgtaatcctagcacttgggaggccaagatgggtggatcacctgaggtcaggagttccagccagtctggccaacatggtgaaaccccatctctacgaaaaatacaaaaattagctgggcgtggtggcacatgcctgtaatcccagttatcgggtaggctgaggcagaagaattgctggaacccaggaggcgaaggctgcagtgagctgagatcgcgccactgcactacagcctaggtgac >DW427578:15-278 (+) gggggtgggtgcggtggctcgcgcccgtagtcctagcacttggggggccgggatgggtggatcacctgaggtcgggagttccagccagtctggccggcatggtggagccccgtctctacggaaaatacaaggattggctgggcgtggtggcacatgcctgtaatcccagttatcgggtaggctgaggcaggagagttgctggagcccgggaggcgaaggctgcagtgagctgagatcgcgccactgcactacagcctagttgac End editing Edited EST: DW431184, type: ag Aligns to: chr1:52549386-52549639 (++) All mismatches: ag (59), ag (67), ag (98), ag (127), ag (145), ag (146), ag (147), ag (161), ag (171), ga (182), ag (200), ag (202), ag (203), ag (208), ag (212), ag (243), ag (255), ag (264), ag (268), Editing mismatches: 18, all mismatches: 19, alignment length: 254, cluster length: 210, total number of As: 56 Locations in RNA: 59 67 98 127 145 146 147 161 171 200 202 203 208 212 243 255 264 268 Locations in genome: 52549428 52549436 52549467 52549496 52549514 52549515 52549516 52549530 52549540 52549569 52549571 52549572 52549577 52549581 52549612 52549624 52549633 52549637 Upstream nucleotide (in genome): c t c c g a a t a t t a c t g c c g Upstream nucleotide summary: a: 4, c: 6, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): t t g g a a c a a t a t g c a g g g Downstream nucleotide summary: a: 6, c: 2, g: 6, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 1, ca: 0, cc: 0, cg: 5, ct: 1, ga: 2, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 0, tt: 2, other: 0 >chr1:52549386-52549639 (+) gacatatagaatattcagaaacatggctgggcgtggtggctcatgcctgtattctcagcactttgggaggccgagacgggcagattgcctgaggtcaggagttcgagaccagcctgaccgacatggtgaaacctcgtctgtactaaaaatacaaaaattagccaggcatggtagcaggcgcctataatcccagctactcgggaggctgaggcaggagaattgcttgaacccgggaggcagaggttgcagtgagc >DW431184:17-270 (+) gacatatagaatattcagaaacatggctgggcgtggtggctcgtgcctgtgttctcagcactttgggaggccgagacgggcggattgcctgaggtcaggagttcgagaccggcctgaccgacatggtggggcctcgtctgtactgaaaatacaagaattagccagacatggtagcaggcgcctgtggtcccggctgctcgggaggctgaggcaggagaattgcttggacccgggaggcggaggttgcggtgggc End editing Edited EST: DW434139, type: ag Aligns to: chr1:149285280-149285506 (++) All mismatches: ga (34), ag (40), ag (46), ag (86), ag (90), ag (113), ag (114), ag (124), ag (135), ag (138), ag (178), ag (184), ag (192), ag (220), Editing mismatches: 13, all mismatches: 14, alignment length: 227, cluster length: 181, total number of As: 48 Locations in RNA: 40 46 86 90 113 114 124 135 138 178 184 192 220 Locations in genome: 149285286 149285292 149285332 149285336 149285359 149285360 149285370 149285381 149285384 149285424 149285430 149285438 149285466 Upstream nucleotide (in genome): t c a c c a a t t t c c a Upstream nucleotide summary: a: 4, c: 5, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a g g g a c g c a g g g c Downstream nucleotide summary: a: 3, c: 3, g: 7, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 2, at: 0, ca: 1, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr1:149285280-149285506 (+) gcctgtaatcccagcactttgggaggccgaggtgggtggatcactcacttgaagtcaggagttcgagaccagccgggccaacatggtgaaagcccgtctctactaaaaatacaaaaattagctgggtgtggtggcgacgcttgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacctgagaggcagaggtggcagtgagccgagatcgcgccac >DW434139:34-260 (+) acctgtgatcccggcactttgggaggccgaggtgggtggatcactcacttgaggtcgggagttcgagaccagccgggccggcatggtgaaggcccgtctctgctgaaaatacaaaaattagctgggtgtggtggcgacgcttgtggtcccggctactcgggaggctgaggcaggagaatcgcttgagcctgagaggcagaggtggcagtgagccgagatcgcgccac End editing Edited EST: DW435437, type: ag Aligns to: chr1:212613356-212613603 (++) All mismatches: ag (14), ag (50), ag (62), ag (84), ag (87), ag (88), ag (90), ag (93), ag (95), ag (96), ag (107), ag (125), ag (126), ag (131), ag (135), ag (139), ag (152), ag (166), ag (191), ag (196), tg (197), Editing mismatches: 20, all mismatches: 21, alignment length: 246, cluster length: 184, total number of As: 48 Locations in RNA: 14 50 62 84 87 88 90 93 95 96 107 125 126 131 135 139 152 166 191 196 Locations in genome: 212613361 212613398 212613410 212613432 212613435 212613436 212613438 212613441 212613443 212613444 212613455 212613473 212613474 212613479 212613483 212613487 212613500 212613514 212613539 212613544 Upstream nucleotide (in genome): g c c t a a t a a a t t a c t c c g g g Upstream nucleotide summary: a: 6, c: 5, g: 4, t: 5, other: 0 Downstream nucleotide (in genome): g g t a a t c a a t t a t g c g g a g t Downstream nucleotide summary: a: 6, c: 2, g: 6, t: 6, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 0, at: 3, ca: 0, cc: 0, cg: 4, ct: 1, ga: 1, gc: 0, gg: 2, gt: 1, ta: 2, tc: 2, tg: 0, tt: 1, other: 0 >chr1:212613356-212613603 (+) ggccgaggcgggcagatcacttgaggttaggagtttgagaccagcctggccaacatggtgaaaccctgtctctgctaaaaatacaaaaattatctgggtatggtggcgtgtgcctgtaatcccagctactcaggagactgaggcaggagaatcgcttgaactggggaggtggaggttgcagtgagccgatattgtaccactgcactccagtctgggtgacagagtaagactctgtctcaaaaaaaaaa >DW435437:10-255 (+) ggcc-ggg-gggcagatcacttgaggttaggagtttgagaccggcctggccaacgtggtgaaaccctgtctctgctgaaggtgcagaggttatctgggtgtggtggcgtgtgcctgtggtcccggctgctcgggagactgaggcgggagaatcgcttggactggggaggtggaggttgcagtgggccgggattgtaccactgcactccagtctgggtgacagagtaagactctgtctcaaaaaaaaaa End editing Edited EST: DW466781, type: ag Aligns to: chr1:1310988-1311322 (++) All mismatches: gt (106), ag (127), ag (136), ag (152), ag (181), ag (195), ag (207), ag (215), ag (229), ag (230), ag (238), ag (240), ag (244), ag (270), ag (271), ag (280), ag (298), ag (336), ag (341), ag (343), ag (348), Editing mismatches: 20, all mismatches: 21, alignment length: 333, cluster length: 222, total number of As: 55 Locations in RNA: 127 136 152 181 195 207 215 229 230 238 240 244 270 271 280 298 336 341 343 348 Locations in genome: 1311099 1311108 1311124 1311153 1311167 1311179 1311187 1311201 1311202 1311210 1311212 1311216 1311242 1311243 1311252 1311270 1311308 1311313 1311315 1311320 Upstream nucleotide (in genome): c a g c c c a t a a a t t a t a g g g c Upstream nucleotide summary: a: 7, c: 5, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): g t g g g t c a a a a g a t c g g g t c Downstream nucleotide summary: a: 5, c: 3, g: 8, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 2, ca: 0, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 3, gt: 1, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr1:1310988-1311322 (+) agagaccaaggacccggaataagcactgagcctgcggtaccgggcctccccgactcctcattcctggggttaaaaaaaaaaaaataagacgcaggctgggcgcggtggctcaggcctgtaatcccagcactttgggaggccgaggctggtggatcacctgaggtcaggagttcgagaccagcatggccaacatggtgaaaccccgtctctactaaaactacaaaaattagcctagcgtggtggcaggcgcctgtaatcccagctactcgggaggctgaggcaagagaatcgcttgcgcccaggaggcagaggttgcggtgagccgagatcgcacc >DW466781:18-350 (+) agagaccaaggacccggaataagcactgagcctgcggtaccgggcctccccgactcctcattcctggggtt--aaaaaaaaaaataagactcaggctgggcgcggtggctcgggcctgtagtcccagcactttggggggccgaggctggtggatcacctgaggtcgggagttcgagaccggcatggccaacgtggtgaagccccgtctctactggaactacagagattggcctagcgtggtggcaggcgcctgtggtcccagctgctcgggaggctgaggcaggagaatcgcttgcgcccaggaggcagaggttgcggtgggccggggtcgcgcc End editing Edited EST: DW467607, type: ag Aligns to: chr1:119687269-119687569 (++) All mismatches: ag (26), ag (42), ag (43), ag (122), ag (127), ag (137), ag (138), ag (140), ag (152), ag (156), ag (174), ag (175), ag (184), ag (197), ag (201), ag (207), ag (216), ag (217), ag (223), ag (240), ag (244), ct (294), ga (312), Editing mismatches: 21, all mismatches: 23, alignment length: 300, cluster length: 220, total number of As: 61 Locations in RNA: 26 42 43 122 127 137 138 140 152 156 174 175 184 197 201 207 216 217 223 240 244 Locations in genome: 119687279 119687295 119687296 119687375 119687380 119687390 119687391 119687393 119687406 119687410 119687428 119687429 119687438 119687451 119687455 119687461 119687470 119687471 119687477 119687494 119687498 Upstream nucleotide (in genome): c t a a c a a t c c t a t g c a a a a g c Upstream nucleotide summary: a: 9, c: 6, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): g a t c t a t c g t a t c g g t a c g g g Downstream nucleotide summary: a: 4, c: 4, g: 7, t: 6, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 1, at: 4, ca: 0, cc: 0, cg: 4, ct: 2, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 2, tg: 0, tt: 0, other: 0 >chr1:119687269-119687569 (+) ggctgggcgcagtggctcacacctgtaatcccagcactttggaaagccgaggtgggcggatcacctgaggtcgggagtttgagaccagcctggccaacatggtgaaaccccatctactaaaaatacaaaaatgagccaggcatggtgctaggcacctgtaatcccagctactcgggaggctgaggcaggagaatcgctcgaaactggaaggcggcagttgcagtgagccaggattgtgccactgcactccagcctgggcaacaagggcgaaactcatctcaaaaaaaaaaaaaaaaagaaa >DW467607:16-315 (+) ggctgggcgcggtggctcacacctgtggtcccagcactttggaaagccgaggtgggcggatcacctgaggtcgggagtttgagaccagcctggccaacatggtgaagccccgtctactaaaggtgcaaaa-tgagccgggcgtggtgctaggcacctgtggtcccagctgctcgggaggctggggcgggagagtcgctcgaggctggagggcggcagttgcagtgggccgggattgtgccactgcactccagcctgggcaacaagggcgaaactcatcttaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: BI261552, type: ag Aligns to: chr1:112195609-112196219 (++) All mismatches: ag (442), ag (510), ag (512), ag (535), ag (541), ag (546), ag (551), ag (577), ag (578), ag (583), ag (587), ag (604), Editing mismatches: 12, all mismatches: 12, alignment length: 610, cluster length: 164, total number of As: 42 Locations in RNA: 442 510 512 535 541 546 551 577 578 583 587 604 Locations in genome: 112196049 112196118 112196120 112196143 112196149 112196154 112196159 112196185 112196186 112196191 112196195 112196212 Upstream nucleotide (in genome): a a c t t a t t a c t c Upstream nucleotide summary: a: 4, c: 3, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): t c t a c g g a t g c g Downstream nucleotide summary: a: 2, c: 3, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 2, ca: 0, cc: 0, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr1:112195609-112196219 (+) aataaacaaaaagtggaaagaacccaaatgtccatcaactgataaataaacaaaatgtgatatagccatacaatggaatatgatttagccataaaaaggaatgaaatactgacacaacttcaacatcgatgaaccttggaagcatgctaagcacaaaagccagacacaaaaggccacaagttgtatgattccatctatgtgaaatgtatagaaaaagcaaatctttagagacagtaagtagattagtggttgccagagactgtagggagggcaaatggggagtaactgttcatggatatgtttttttttgggaggggtgatgaaaatattcagaaattagatagtgatggtggttataacagccttgtgaatataatttttaaatccactgaattgtgtacttgaaaatggtgggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggcggatcacctgaggttgggagtttgagaccagcctgatcaacatggagaaacccccgtctctactaaaaatacaaaagattagctgggcgtggtggcacatgcctgtaatcccagctacgtgggaggctgaggcaggagaat >BI261552:2-611 (+) aataaacaaaaagtggaaagaacccaaatgtccatcaactgataaataaacaaaatgtgatatagccatacaatggaatatgatttagccataaaaaggaatgaaatactgacacaacttcaacatcgatgaaccttggaagcatgctaagcacaaaagccagacacaaaaggccacaagttgtatgattccatctatgtgaaatgtatagaaaaagcaaatctttagagacagtaagtagattagtggttgccagagactgtagggagggcaaatggggagtaactgttcatggatatgtttttttttgggaggggtgatgaaaatattcagaaattagatagtgatggtggttataacagccttgtgaatataatttttaaatccactgaattgtgtacttgaaaatggtgggccaggcgcggtggctcacgcctgtagtcccagcactttgggaggctgaggcgggcggatcacctgaggttgggagtttgagaccagc-tgatcagcgtggagaaacccccgtctctactgaaaatgcaaaggattggctgggcgtggtggcacatgcctgtggtcccggctgcgtgggaggctgaggcgggagaat End editing Edited EST: BM128048, type: ag Aligns to: chr1:109762083-109762605 (++) All mismatches: ag (92), ag (122), ag (127), ag (154), ag (170), ag (182), ag (192), ag (198), ct (251), ag (252), ag (260), ag (292), ag (315), ag (316), ag (333), Editing mismatches: 14, all mismatches: 15, alignment length: 523, cluster length: 242, total number of As: 44 Locations in RNA: 92 122 127 154 170 182 192 198 252 260 292 315 316 333 Locations in genome: 109762174 109762204 109762209 109762236 109762252 109762264 109762274 109762280 109762334 109762342 109762374 109762397 109762398 109762415 Upstream nucleotide (in genome): c c c c c t g c c t g a a c Upstream nucleotide summary: a: 2, c: 8, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): c g c c g g c c c g t a t t Downstream nucleotide summary: a: 1, c: 6, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 1, ca: 0, cc: 5, cg: 2, ct: 1, ga: 0, gc: 1, gg: 0, gt: 1, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr1:109762083-109762605 (+) ttttgaactacatataaatggacttatgtagtatatacttttgcatatggcttctttcttttttttttttgagacagattcttgctcagtcacccaggctggtgtgcagtggcgtgatctcagctcactgcaacctccgcctcccgggctcacaccattctcctgcctcagcctcccgagtagctgggatgacaggcacccaccaccatgcctggctaattttttttgtattttattagagctggggtttcaccatgttagccaggatggtcttgatctcctgaccttgtgatccacccgccttggcctcccaaaatgctgggattacaggcatgagccaccgcgcccggcatggcttctttctttcaagattatgtctgtaagattcatccatgttattaacatgtagcagtagttggttcttttcattgctatataatactccattatgtaaatatgccaatcaattctactagcatatttactgcatgacatttggataaactgggttgttaccggttga >BM128048:1-523 (+) ttttgaactacatataaatggacttatgtagtatatacttttgcatatggcttctttcttttttttttttgagacagattcttgctcagtcgcccaggctggtgtgcagtggcgtgatctcggctcgctgcaacctccgcctcccgggctcacgccattctcctgcctcggcctcccgagtggctgggatggcaggcgcccaccaccatgcctggctaattttttttgtattttattagagctggggttttgccatgttggccaggatggtcttgatctcctgaccttgtggtccacccgccttggcctcccaaggtgctgggattacaggcgtgagccaccgcgcccggcatggcttctttctttcaagattatgtctgtaagattcatccatgttattaacatgtagcagtagttggttcttttcattgctatataatactccattatgtaaatatgccaatcaattctactagcatatttactgcatgacatttggataaactgggttgttaccggttga End editing Edited EST: BM703747, type: ag Aligns to: chr1:204521114-204521424 (++) All mismatches: ag (38), ag (46), ag (47), ag (97), ag (110), ag (125), ag (128), ag (129), ag (134), ag (138), ag (141), ag (167), ag (194), ag (200), ag (209), ag (216), ag (248), ag (278), ag (287), ga (295), ta (306), ag (310), ag (311), Editing mismatches: 21, all mismatches: 23, alignment length: 311, cluster length: 274, total number of As: 87 Locations in RNA: 38 46 47 97 110 125 128 129 134 138 141 167 194 200 209 216 248 278 287 310 311 Locations in genome: 204521151 204521159 204521160 204521210 204521223 204521238 204521241 204521242 204521247 204521251 204521254 204521280 204521307 204521313 204521322 204521329 204521361 204521391 204521400 204521423 204521424 Upstream nucleotide (in genome): c t a g a t a a a a t t c a a g c a c c a Upstream nucleotide summary: a: 10, c: 5, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): c a t c a a a t a t g g g t c g t a g a n Downstream nucleotide summary: a: 7, c: 3, g: 5, t: 5, other: 1 Dinucleotide summary: aa: 4, ac: 1, ag: 0, at: 4, ca: 1, cc: 1, cg: 2, ct: 1, ga: 0, gc: 1, gg: 1, gt: 0, ta: 2, tc: 0, tg: 2, tt: 0, other: 1 >chr1:204521114-204521424 (+) aaaaaaaaaaaaaatcgtggaccgggcgtagtggctcacgcctgtaatcccaacactttgggagatcacctaggtcgggagtttgagaccagcctgaccgacatggagaaaccccatttttactaaaaatacaaaaaattagctgggcatggtggtgcatgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacctgagagggggagattgcggtgagctgagattgcgccattgcaccccagcctgggcaacaatagcgaaactgtctcagaaaaaagaaaaaaaaaatcgcaa >BM703747:1-311 (+) aaaaaaaaaaaaaatcgtggaccgggcgtagtggctcgcgcctgtggtcccaacactttgggagatcacctaggtcgggagtttgagaccagcctggccgacatggagagaccccatttttactgaaggtacagaaagttggctgggcatggtggtgcatgcctgtggtcccagctactcaggaggctgaggcgggagagtcgcttgagcctgagggggggagattgcggtgagctgagattgcgccgttgcaccccagcctgggcaacaatagcgagactgtctcggaaaaaaaaaaaaaaaaaacgcgg End editing Edited EST: BU616991, type: ag Aligns to: chr1:35583343-35583735 (++) All mismatches: ct (400), ag (575), ag (586), ag (588), ag (595), ag (616), ag (627), ag (633), ag (634), ag (637), ag (641), ag (642), ag (656), ag (657), ag (659), ag (666), ag (684), ag (689), ag (690), ag (692), ag (698), ag (702), ag (725), ag (739), Editing mismatches: 23, all mismatches: 24, alignment length: 394, cluster length: 164, total number of As: 53 Locations in RNA: 575 586 588 595 616 627 633 634 637 641 642 656 657 659 666 684 689 690 692 698 702 725 739 Locations in genome: 35583572 35583583 35583585 35583592 35583612 35583623 35583629 35583630 35583633 35583637 35583638 35583652 35583653 35583655 35583662 35583681 35583686 35583687 35583689 35583695 35583699 35583721 35583735 Upstream nucleotide (in genome): t t t a c c c a a c a c a c a a a a a g c t c Upstream nucleotide summary: a: 10, c: 8, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g t a c g a a g t a g a c t a t a a a g g a n Downstream nucleotide summary: a: 10, c: 2, g: 6, t: 4, other: 1 Dinucleotide summary: aa: 4, ac: 2, ag: 2, at: 2, ca: 4, cc: 0, cg: 2, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 0, tg: 1, tt: 1, other: 1 >chr1:35583343-35583735 (+) accagcctgactaacatggagaaaccccgtctctactaaaactataaaattagccgggcgtggtggcacatgcctgtaataccagctactcgggaggctgagacgggagaatagcttgaaccccaaaggctgtggttgcagtgagctgagatcgtgcaattgcactctagtctgggcaacaagagagaaactccgtttcaaaaaagagagaaaataggctggggacggtagctcacgcctataatcccaacacttt-gggaggctaaggcaggcggatcacaaggtcaagaattcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaaaaatgagccaggtgtggtgg-tgggtgcctgtaattccagctactca >BU616991:346-739 (+) accagcctgactaacatggagaaaccccgtctctactaaaactataaaattagctgggcgtggtggcacatgcctgtaataccagctactcgggaggctgagacgggagaatagcttgaaccccaaaggctgtggttgcagtgagctgagatcgtgcaattgcactctagtctgggcaacaagagagaaactccgtttcanaaaagagagaaaataggctggggacggtggctcacgcctgtgatcccagcacttttgggaggctaaggcgggcggatcacgaggtcgggagttcgggaccagcctggccggcgtggtgagaccc-atctctactaaaagtacaggagaaatgggccgggtgtggtgggtgggtgcctgtgattccagctactcg End editing Edited EST: BX418475, type: ag Aligns to: chr1:153634298-153635032 (++) All mismatches: at (34), ag (92), ag (224), ag (227), ag (228), ag (255), ag (265), ag (267), ac (281), ag (297), ag (310), ag (312), ag (314), ag (324), ag (327), ag (333), ag (335), ag (340), ag (342), ag (343), ag (348), ag (351), ag (352), ag (354), ag (355), ag (356), ag (364), ac (371), ag (376), ag (378), ag (382), ag (387), ag (389), ag (394), ag (403), ag (405), ag (411), ag (415), ag (416), ag (420), ag (421), ag (423), ag (426), ag (427), ag (428), ag (429), ag (433), ag (438), ag (439), ag (442), ag (444), ag (450), ag (454), ag (459), ac (488), ag (492), ag (493), ag (494), ag (503), ag (506), ag (510), ag (512), ag (517), ag (520), ag (523), ag (527), ag (532), ag (539), tg (555), ag (556), ag (559), ag (560), ag (562), ag (570), ag (574), ag (587), Editing mismatches: 71, all mismatches: 76, alignment length: 735, cluster length: 496, total number of As: 182 Locations in RNA: 92 224 227 228 255 265 267 297 310 312 314 324 327 333 335 340 342 343 348 351 352 354 355 356 364 376 378 382 387 389 394 403 405 411 415 416 420 421 423 426 427 428 429 433 438 439 442 444 450 454 459 492 493 494 503 506 510 512 517 520 523 527 532 539 556 559 560 562 570 574 587 Locations in genome: 153634386 153634518 153634521 153634522 153634549 153634559 153634561 153634591 153634604 153634606 153634608 153634618 153634621 153634627 153634629 153634634 153634636 153634637 153634642 153634645 153634646 153634648 153634649 153634650 153634658 153634670 153634672 153634676 153634681 153634683 153634688 153634697 153634699 153634705 153634709 153634710 153634714 153634715 153634717 153634720 153634721 153634722 153634723 153634727 153634732 153634733 153634736 153634738 153634744 153634748 153634753 153634786 153634787 153634788 153634797 153634800 153634804 153634806 153634811 153634814 153634817 153634821 153634826 153634833 153634850 153634853 153634854 153634856 153634864 153634868 153634881 Upstream nucleotide (in genome): g t g a a c g c g g g c g g g t g a t g a g a a t t g g c t c g g c t a c a t c a a a c g a g c t g t g a a c c t a c t c c t c t g a a a g g Upstream nucleotide summary: a: 18, c: 16, g: 23, t: 14, other: 0 Downstream nucleotide (in genome): g g a g a g c a g g g g g g t g a t g a g a a t t g t t t g c g c g a g a t t a a a c g a t c c t g c a a t c t a g g g g g g g g a a g g a g Downstream nucleotide summary: a: 19, c: 8, g: 31, t: 13, other: 0 Dinucleotide summary: aa: 6, ac: 1, ag: 6, at: 5, ca: 3, cc: 3, cg: 8, ct: 2, ga: 8, gc: 3, gg: 9, gt: 3, ta: 2, tc: 1, tg: 8, tt: 3, other: 0 >chr1:153634298-153635032 (+) ttaaaatgatattctagtttactctggtatatggaaaggttccaggagtttgtcctttaattcaaagacagcttcaaattgtgatctgagtatttataattaaatgactcaattatcattttcaacaaaagagtacacaaagccaaaagcaaaaaaggttgccacatgcaaaaaaacaaacaaacaaaaaacaccaaccagaaagaccaagagccctactaggaagtactttaatagtttttcttagaaaaaaaaatttccagacacttaacatttcacaacatttcaacagcaaagtattagttgagagaggggttttcaggagttggagattatagaatattaggaagaaatgttggtatcctccattatagatggatggcataggtcacaaatgggagactggcagctaagccaatatcaaaacccagtggaatgacacttctatggagtttacttttcttcctgctatcttccctatcccacggaaatgtctgtcaccatgtaaagcccagtagcaggcagcttaggctccagtcttcccccttgggtaggaaaaggagtgaagggaatgtcactcctgagtttccatgctttcttcttcctctccttgaggtggttcttctgtattctcctcttcttcctctccttccttcttctctggtggcttctcataagccttttctgaaggtgttactatcactccatcccaggtagatatttcagaagcaagat >BX418475:4-738 (+) ttaaaatgatattctagtttactctggtatttggaaaggttccaggagtttgtcctttaattcaaagacagcttcaaattgtgatctgggtatttataattaaatgactcaattatcattttcaacaaaagagtacacaaagccaaaagcaaaaraggttgccacatgcaaaaraacaaacaaacaaaaaacmccaaccrgaaagrccaagagccctactggggggtactttaatagtttttcttagaaaagraaatttccgggcacttaacatttcccaacatttcaacagcgaagtattagttggggggggggttttcgggggttgggggttatggggtattgggggggggtgttggkgtcckcccttatgggkgggtggsgtgggkcgcaaatggggggctggsggckgggcsggtgtcggggcccggkggggtggcgcttckgtggggtttgcttttcttcckgckatcttccctatcccccgggggtgkctgksgccgtgkgaggcccggtggcgggcggcktgggckccggtcttcccccttgggggggggagggagtgagggggatgtsactcckgggtttccatgctttcttcttcctctccttgaggtggttcttctgtattctcctcttcttcctctccttccttcttctctggtggcttctcataagccttttctgaaggtgttactatcactccatcccaggtagatatttcagaagcaagat End editing Edited EST: AW276963, type: ga Aligns to: chr1:27030763-27031097 (++) All mismatches: ag (19), ga (100), at (113), ga (136), ga (149), ga (152), ga (153), ga (154), ga (162), ga (166), ga (175), ga (177), ga (183), ga (185), ga (190), ga (192), ga (206), ga (210), ga (212), ga (227), ga (229), ga (233), ga (236), ga (237), ga (243), ga (247), ga (251), ga (259), ga (266), ga (286), ga (287), ga (299), ga (305), ga (306), gc (309), ga (310), ga (311), ga (313), gc (315), ga (316), ga (319), Editing mismatches: 37, all mismatches: 41, alignment length: 335, cluster length: 220, total number of Gs: 60 Locations in RNA: 100 136 149 152 153 154 162 166 175 177 183 185 190 192 206 210 212 227 229 233 236 237 243 247 251 259 266 286 287 299 305 306 310 311 313 316 319 Locations in genome: 27030862 27030898 27030911 27030914 27030915 27030916 27030924 27030928 27030937 27030939 27030945 27030947 27030952 27030954 27030968 27030972 27030974 27030989 27030991 27030995 27030998 27030999 27031004 27031009 27031013 27031021 27031028 27031048 27031049 27031061 27031067 27031068 27031072 27031073 27031075 27031078 27031081 Upstream nucleotide (in genome): g c t t g g a t t a t g t t t t t t a t t g a a t t t t g t t g g g c g a Upstream nucleotide summary: a: 6, c: 2, g: 10, t: 19, other: 0 Downstream nucleotide (in genome): c a t g g a g c a g g a t t c t t a g a g g g c c c c g c t g c g c c t c Downstream nucleotide summary: a: 6, c: 12, g: 12, t: 7, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 4, at: 0, ca: 1, cc: 1, cg: 0, ct: 0, ga: 2, gc: 4, gg: 3, gt: 1, ta: 3, tc: 5, tg: 5, tt: 6, other: 0 >chr1:27030763-27031097 (+) agtaaatttggatttggaaggtcatgtcaccttcagagttgtgtgccctggacagctctgtagtaatggtggttcaactttgttggtgagtctgtcttggcagagttagttgacctttcttaaaacaagagccacgaagtaagtatctgttgggactcttaggctgctatttctgaggagctgggagctgtgttcaagtcaagttgcttgtgttagaccttatattgaggttgatggg-ttaggtaagcctgcacatatgcagtctgcccatttattcatagaaatggcctttaatactgtttttggccgggcgcggtagctcacacctataatcc >AW276963:1-335 (+) agtaaatttggatttggagggtcatgtcaccttcagagttgtgtgccctggacagctctgtagtaatggtggttcaactttgttggtgagtctgtcttgacagagttagttgtcctttcttaaaacaagagccacaaagtaagtatctattaaaactcttaagctactatttctaaagagctagaagctatattcaagtcaagttacttatattagaccttatattaaagttaataagattaa-taaacctacacatatacagtctacccatttattcatagaaataacctttaatactatttttaacccaacaccataactcacacctataatcc End editing Edited EST: AW317041, type: ga Aligns to: chr1:32508481-32508853 (++) All mismatches: ga (118), ga (151), ga (156), ga (166), ga (174), ga (180), ga (183), ga (215), ga (220), ga (226), ga (249), ga (256), ga (267), ga (275), gc (277), ga (282), ga (285), ga (319), ga (320), ga (322), ga (323), ga (326), ga (335), ga (351), Editing mismatches: 23, all mismatches: 24, alignment length: 373, cluster length: 234, total number of Gs: 45 Locations in RNA: 118 151 156 166 174 180 183 215 220 226 249 256 267 275 282 285 319 320 322 323 326 335 351 Locations in genome: 32508598 32508631 32508636 32508646 32508654 32508660 32508663 32508695 32508700 32508706 32508729 32508736 32508747 32508755 32508762 32508765 32508799 32508800 32508802 32508803 32508806 32508815 32508831 Upstream nucleotide (in genome): t t t c t t a a t a c a t t a c t g c g t a t Upstream nucleotide summary: a: 6, c: 4, g: 2, t: 11, other: 0 Downstream nucleotide (in genome): a a a t t c a g t a g g t a a t g c g t a g a Downstream nucleotide summary: a: 9, c: 2, g: 6, t: 6, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 3, at: 0, ca: 0, cc: 0, cg: 2, ct: 2, ga: 0, gc: 1, gg: 0, gt: 1, ta: 6, tc: 1, tg: 1, tt: 3, other: 0 >chr1:32508481-32508853 (+) tgttgtttaaatataaacagaagtgtaccttttataataaaaaaaagaagttgagtaaaaaaaaaaaacacacaaacctgttagtttcaaaaatgacattgcttgcttaaaggttctgaagtaaaggcttgttaagtttctcttagttttgatttgaggcatcccgtaaagttgtagttgcagaatcccaaactaggctacatttcaaaattcagggctgtttaagatttaaaatcacaaacattaacggcagtaggcaccaccatgtaaaagtgagctcagacgtctctaaaaaatgtttcctttataaaagcacatggcggttgaatcttaaggttaaattttaatatgaaagatcctcatgaattaaata >AW317041:1-373 (+) tgttgtttaaatataaacagaagtgtaccttttataataaaaaaaagaagttgagtaaaaaaaaaaaacacacaaacctgttagtttcaaaaatgacattgcttgcttaaaggttctaaagtaaaggcttgttaagtttctcttagttttaatttaaggcatcccataaagttatagttacaaaatcccaaactaggctacatttcaaaattcaaggctatttaaaatttaaaatcacaaacattaacagcagtaagcaccaccatataaaagtaacctcaaacatctctaaaaaatgtttcctttataaaagcacataacaattaaatcttaaagttaaattttaatataaaagatcctcatgaattaaata End editing Edited EST: AW339441, type: ga Aligns to: chr1:22443806-22444229 (++) All mismatches: ga (120), ga (143), ga (150), ga (173), ga (175), ga (221), ga (222), ga (238), ga (240), ga (253), ga (257), ga (262), ga (264), ga (268), ga (278), ga (287), ga (288), ga (299), ga (306), ga (321), ga (323), ga (324), ga (327), ga (329), ga (339), ga (346), ga (354), ga (355), ga (357), ga (358), ga (361), ga (365), ga (366), ga (370), ga (372), ga (377), ga (378), ga (391), ga (392), ga (407), Editing mismatches: 40, all mismatches: 40, alignment length: 425, cluster length: 286, total number of Gs: 96 Locations in RNA: 120 143 150 173 175 221 222 238 240 253 257 262 264 268 278 287 288 299 306 321 323 324 327 329 339 346 354 355 357 358 361 365 366 370 372 377 378 391 392 407 Locations in genome: 22443924 22443947 22443954 22443977 22443979 22444025 22444026 22444042 22444044 22444057 22444061 22444066 22444068 22444072 22444082 22444091 22444092 22444103 22444110 22444125 22444127 22444128 22444131 22444133 22444143 22444150 22444158 22444159 22444161 22444162 22444164 22444168 22444169 22444173 22444175 22444180 22444181 22444194 22444195 22444209 Upstream nucleotide (in genome): a a a c a a g a a t a t t a g t g t a t t g t t t t t g c g t t g t g t g t g a Upstream nucleotide summary: a: 11, c: 2, g: 10, t: 17, other: 0 Downstream nucleotide (in genome): a g g a a g c a g t g t c t g g a t a t g c t g a c g c g t g g c g c g t g t g Downstream nucleotide summary: a: 7, c: 7, g: 17, t: 9, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 6, at: 1, ca: 1, cc: 0, cg: 1, ct: 0, ga: 1, gc: 5, gg: 1, gt: 3, ta: 1, tc: 2, tg: 9, tt: 5, other: 0 >chr1:22443806-22444229 (+) taaagaaataattgttttatcgtgcatcagactatgtcatgggacgtcacaatggcaaagagcctagtataaaaattggaggatggggtggggcagcagagtgggttagcagcatccagagctgggctttatccagccctaggcctcagggcatcacctttgccttgggacgagaggagagtggtttgggcaggatgtggaccctctggccaatttccaggccacggtgaggccaagagggggtgggctatgtaagggctgtgccagttccccctgggacagtttggagctgggcatgtccaaagaagctccttttcctgtggctgtggatttctttgatctctgcagcactggcgg-tggttggcctgggcagtggttcctagaatttggtctcatt-aacctaggtcgcaaccttcagaacccc >AW339441:2-426 (+) taaagaaataattgttttatcgtgcatcagactatgtcatgggacgtcacaatggcaaagagcctagtataaaaattggaggatggggtggggcagcagagtgggttagcagcatccaaagctgggctttatccanccctaagcctcaaggcatcacctttgccttgggacaaaaggagagtggtttgggcangatgtggaccctctggccaatttccnaaccacngtgaggccaaaaaggggtgggctatataaaggctataccaattccccctgagacantttaaagctgggcatatccaaaaaanctccttttcctataactatagatttctttaatctctacagcactaacaagtagttaacctagacagtaattcctagaatttaatctcatttaacctaa-tcgcaaccttcagaacccc End editing Edited EST: AW772150, type: ga Aligns to: chr1:1168228-1168642 (++) All mismatches: gt (35), ga (117), ga (126), ga (128), ga (138), ga (152), ga (158), ga (160), ga (170), ga (175), ga (181), ga (184), ga (187), ga (191), ga (198), ga (199), ga (200), ga (211), ga (231), ga (232), ga (237), ga (240), ga (243), ga (259), gt (260), ga (262), ga (265), ga (280), ga (289), ga (292), ga (293), ga (302), ga (307), ga (310), ga (311), ga (313), ga (315), ga (317), ga (319), ga (321), ga (324), ga (328), ga (330), ga (336), ga (338), ga (341), ga (343), ga (349), ga (351), ga (355), ga (362), ga (364), ga (368), ga (372), ga (373), ga (377), ga (379), ga (382), ga (393), ga (396), ga (406), ga (407), ga (409), ga (410), ga (411), Editing mismatches: 63, all mismatches: 65, alignment length: 415, cluster length: 295, total number of Gs: 107 Locations in RNA: 117 126 128 138 152 158 160 170 175 181 184 187 191 198 199 200 211 231 232 237 240 243 259 262 265 280 289 292 293 302 307 310 311 313 315 317 319 321 324 328 330 336 338 341 343 349 351 355 362 364 368 372 373 377 379 382 393 396 406 407 409 410 411 Locations in genome: 1168344 1168353 1168355 1168365 1168379 1168385 1168387 1168397 1168402 1168408 1168411 1168414 1168418 1168425 1168426 1168427 1168438 1168458 1168459 1168464 1168466 1168470 1168486 1168489 1168492 1168507 1168516 1168519 1168520 1168529 1168534 1168537 1168538 1168540 1168542 1168544 1168546 1168548 1168551 1168555 1168557 1168563 1168565 1168568 1168570 1168576 1168578 1168582 1168589 1168591 1168595 1168599 1168600 1168604 1168606 1168609 1168620 1168623 1168633 1168634 1168636 1168637 1168638 Upstream nucleotide (in genome): c c c c c c t c g c c t c c g g c c g c c t t t c t t t g c c t g c c c a g c t t c c g t t c t c t c t g c c c t t g g a g g Upstream nucleotide summary: a: 2, c: 30, g: 13, t: 18, other: 0 Downstream nucleotide (in genome): c c a c a t t c c c g g t g g a c g t c g c g a c g c g a c c g c c c a g c c t c c a t c c c t t t a g t c c c c c g a g g c Downstream nucleotide summary: a: 9, c: 29, g: 15, t: 10, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 5, cc: 18, cg: 4, ct: 3, ga: 3, gc: 4, gg: 3, gt: 3, ta: 1, tc: 7, tg: 6, tt: 4, other: 0 >chr1:1168228-1168642 (+) ccgcgtcaagccgggggggcgctggcgcgaggccgcctggcaactctgcgactactacctgccctacgcgctgggcggcggctacgtgctctcggccgacctggtgcactacctgcgcctcagccgcgactacctgcgcgcctggcacagcgaggacgtgtctctgggcgcctggctggcgccggtggacgtccagcgggagcacgacccgcgcttcgacaccgaataccggtcccg-cggctgcagcaaccagtacctggtgacgcacaagcagagcctggaggacatgctggagaagcacgcgacgctggcgcgcgagggccgcctgtgcaagcgcgaggtgcagctgcgcctgtcctacgtgtacgactggtccgcgccgccctcgcagtgctgccagagaagggagggcatc >AW772150:1-415 (+) ccgcgtcaagccgggggggcgctggcgcgaggcctcctggcaactctgcgactactacctgccctacgcgctgggcggcggctacgtgctctcggccgacctggtgcactacctgcacctcagccacaactacctgcacgcctggcacagcaaggacatatctctgggcacctgactggcaccagtagacatccagcaaaagcacgacccacgcttcgacaccgaataccaatcccagca-ctacagcaaccagtacctattaacacacaagcagagcctagaggacatactaaagaagcacacgacactaacacacaaagaccacctatacaagcacaagatacagctacacctatcctacatatacaactaatccacaccaccctcgcagtactaccagagaagaaaaaacatc End editing Edited EST: BF746587, type: ag Aligns to: chr1:235516461-235516698 (++) All mismatches: ag (29), ag (30), ag (35), ag (40), ag (61), ag (64), ag (71), ag (76), ag (80), ag (84), ag (97), ag (102), ag (103), ag (116), ag (119), ag (123), ag (178), ag (179), ag (193), ag (205), Editing mismatches: 20, all mismatches: 20, alignment length: 238, cluster length: 177, total number of As: 63 Locations in RNA: 29 30 35 40 61 64 71 76 80 84 97 102 103 116 119 123 178 179 193 205 Locations in genome: 235516474 235516475 235516480 235516485 235516506 235516509 235516516 235516521 235516525 235516529 235516542 235516547 235516548 235516561 235516564 235516568 235516623 235516624 235516638 235516650 Upstream nucleotide (in genome): t a t a t c a c t c g g a c g c t a a a Upstream nucleotide summary: a: 7, c: 5, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): a a c a a c t g c g g a t g g g a g a a Downstream nucleotide summary: a: 8, c: 3, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 1, at: 2, ca: 0, cc: 1, cg: 4, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 3, tc: 2, tg: 0, tt: 0, other: 0 >chr1:235516461-235516698 (+) ccatgtctctactaaaaatacaaaaattagccaggcgtgatggctaacacctgtaatcccagctactcaggaggctgagggaggagaattgcttgaacccaggaggcagaggttgcagtgagctgagaatgtgccactgcactccagcctgggagacagagtaagattccgtctcaaaaaaaaaagaaaaatatttgcacaaaatatctaggggtaggacctgggagacagaggacta >BF746587:16-253 (+) ccatgtctctactggaaatgcaaagattagccaggcgtgatggctgacgcctgtagtcccggctgctcgggaggctgaggggggagggttgcttgaacccggggggcggaggttgcagtgagctgagaatgtgccactgcactccagcctgggagacagagtgggattccgtctcaagaaaaaaagaaagatatttgcacaaaatatctaggggtaggacctgggagacagaggacta End editing Edited EST: AV702659, type: ag Aligns to: chr1:28145469-28145800 (++) All mismatches: ag (55), ag (63), ag (105), ag (109), ag (128), ag (135), ag (137), ag (140), ag (178), ag (191), ag (205), ag (251), Editing mismatches: 12, all mismatches: 12, alignment length: 332, cluster length: 197, total number of As: 57 Locations in RNA: 55 63 105 109 128 135 137 140 178 191 205 251 Locations in genome: 28145523 28145531 28145573 28145577 28145596 28145603 28145605 28145608 28145646 28145659 28145673 28145719 Upstream nucleotide (in genome): c t a c t c t t t t c t Upstream nucleotide summary: a: 1, c: 4, g: 0, t: 7, other: 0 Downstream nucleotide (in genome): c a g g g t g a a g g c Downstream nucleotide summary: a: 3, c: 2, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 3, tc: 1, tg: 3, tt: 0, other: 0 >chr1:28145469-28145800 (+) gaaataatttcgagtttattaaaagttgcaaaaataggctgggcatggttgctcacgcttgtaatcccagcactttgggaggctgaggtgggaggatcacttgaagccaggagttcaagactagcctaggcaacatagtaagaccctgtctttaccaaaaaattagccaggcatagtaacatgcacctgtagtcctagctactcaggaggctgaggtgggaagatcacttgaacccaggagttggaggctacggtgaactattattgtaccactgcactccagtctaggtgacagagtgagatcccgtctcttaaaaaaaaaaaaaaaaaaa >AV702659:1-332 (+) gaaataatttcgagtttattaaaagttgcaaaaataggctgggcatggttgctcgcgcttgtgatcccagcactttgggaggctgaggtgggaggatcacttgaggccgggagttcaagactagcctgggcaacgtggtgagaccctgtctttaccaaaaaattagccaggcatagtgacatgcacctgtggtcctagctactcgggaggctgaggtgggaagatcacttgaacccaggagttggaggctgcggtgaactattattgtaccactgcactccagtctaggtgacagagtgagatcccgtctcttaaaaaaaaaaaaaaaaaaa End editing Edited EST: AL534721, type: ag Aligns to: chr1:32799452-32800224 (++) All mismatches: ag (272), ag (333), ag (356), ag (431), ag (432), ag (434), ag (456), ag (466), ag (468), ag (472), ag (473), ag (476), ag (480), ag (486), ag (490), ag (492), ag (495), ag (498), ag (512), ag (524), ag (525), ag (532), ag (536), ag (556), ag (558), ag (561), ag (563), ag (564), ag (567), ag (569), ag (576), ag (581), ag (583), ag (584), ag (588), ag (590), ag (593), ag (597), ag (599), ag (602), ag (605), ag (606), ag (607), ag (612), ag (623), ag (626), ag (630), ag (633), Editing mismatches: 48, all mismatches: 48, alignment length: 773, cluster length: 362, total number of As: 116 Locations in RNA: 272 333 356 431 432 434 456 466 468 472 473 476 480 486 490 492 495 498 512 524 525 532 536 556 558 561 563 564 567 569 576 581 583 584 588 590 593 597 599 602 605 606 607 612 623 626 630 633 Locations in genome: 32799723 32799784 32799807 32799882 32799883 32799885 32799907 32799917 32799919 32799923 32799924 32799927 32799931 32799937 32799941 32799943 32799946 32799949 32799963 32799975 32799976 32799983 32799987 32800007 32800009 32800012 32800014 32800015 32800018 32800020 32800027 32800032 32800034 32800035 32800039 32800041 32800044 32800048 32800050 32800053 32800056 32800057 32800058 32800063 32800074 32800077 32800081 32800084 Upstream nucleotide (in genome): c a g g a g c g c g a g t c g c g c a g a a g a g g g a c g g g g a c c g g g g g a a a g g c t Upstream nucleotide summary: a: 12, c: 10, g: 24, t: 2, other: 0 Downstream nucleotide (in genome): g g g a g a g c g a g g g g c g g t c a g g c g g g a c g t t g a t c g g g g g a a g c g g a g Downstream nucleotide summary: a: 9, c: 7, g: 28, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 7, at: 1, ca: 1, cc: 1, cg: 7, ct: 1, ga: 7, gc: 3, gg: 12, gt: 2, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr1:32799452-32800224 (+) atttattccttttccaaatgttacagtaaaaccaggtggaagagaatggttttagcagttagaaaaaaaaaaaaagtacaaatctggggtttggccattaaaagttatttacaacagtgggagaaaaaaagacaagaagttgtttcacattacagacctccccccaccccaaagcctaatacttgcttaccaagtcaaaaaagagacacagttgattcacaggctggaggtttgaacttgagtaagacatttataaaaacctagacggggcagtgtcctccccagcccaggtgccactaggcacagcacaagagactaaaaacaacaggggaaggctggacactcaaggtttgggagtataagcaccccacttctggctcagggatttggggagtagggtaaacaaaacctacttggaaaagaattggggaagaaaaccaacaactgccttatgcaggggtggggacagggaaggaggtagggccagggacaggagcatttcacatcactaacctaacttgggaagctgtaagggaccatcttcaactggccttaagaggagaaccagatggctgatgggagaatccacaggagggagaggaggaaagggaacgtggctgggaggaggcaatagccccttcctttctgggcacaggaaggcagccagggcaccaggtccaggcagtgacctcacaaggacagcacagtttttgcagcttagagatcacccacctgcccctacctagctactcattctgctcagcgctggctgg >AL534721:1-773 (+) atttattccttttccaaatgttacagtaaaaccrggtggaagagaatggttttagcagttagaaaaaaaaaaaaagtacaaatctggggtttggccattaaaagttatttacaacagtgggagaaaaaaagacaagaagttgtttcacattacrgacctccccccaccccaargcctaatacttgcttaccaagtcaaaaaagagacacagttgattcacaggctggaggtttgaacttgagtaagacatttataaaaacctagacggggcggtgtcctccccagcccrggtgccactaggcacagcacaagagactaaaaacaacaggggagggctggacmctcaaggtttgggggtataagcaccccacttctggctcagggatttggggagtagggtaaacaaaacctacttggaaaagrattggggggggaaaccaacaactgccttatgcgggggkgggggcgggggggggggtggggccgggggsgggggcgtttcacatcactagcctaacttggggggckgtagggggccatcttcaackggccttagggggggggccgggtggckggtgggggggtccgcgggggggggggggggggggggagsgtggctgggggggggsgatggccccttcctttctgggcacaggaaggcagccagggcaccaggtccaggcagtgacctcacaaggacagcacagtttttgcagcttagagatcacccacctgccccyacctagctactcattctgctcagcgctggctgg End editing Edited EST: DW408471, type: ag Aligns to: chr20:51937944-51938245 (++) All mismatches: ag (21), ag (43), ag (44), ag (61), ag (67), ag (70), ag (79), ag (82), ag (95), ag (106), ag (111), ag (113), ag (115), ag (119), ag (120), ag (121), ag (126), ag (132), ag (135), ag (144), ag (150), ag (176), ag (182), ag (186), ag (209), ag (212), ag (217), ag (218), ag (242), ag (254), ag (276), ga (314), ga (318), Editing mismatches: 31, all mismatches: 33, alignment length: 302, cluster length: 256, total number of As: 70 Locations in RNA: 21 43 44 61 67 70 79 82 95 106 111 113 115 119 120 121 126 132 135 144 150 176 182 186 209 212 217 218 242 254 276 Locations in genome: 51937947 51937969 51937970 51937987 51937993 51937996 51938005 51938008 51938021 51938032 51938037 51938039 51938041 51938045 51938046 51938047 51938052 51938058 51938061 51938070 51938076 51938102 51938108 51938112 51938135 51938138 51938143 51938144 51938168 51938180 51938202 Upstream nucleotide (in genome): c t a c a c c g c t a c t g a a c t t a t t c t a c g a g t c Upstream nucleotide summary: a: 8, c: 10, g: 4, t: 9, other: 0 Downstream nucleotide (in genome): g a t g g g c g a g c t g a a c t c a a g a g c t c a c g c a Downstream nucleotide summary: a: 9, c: 8, g: 10, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 1, at: 2, ca: 2, cc: 2, cg: 4, ct: 2, ga: 2, gc: 0, gg: 2, gt: 0, ta: 3, tc: 3, tg: 3, tt: 0, other: 0 >chr20:51937944-51938245 (+) gtcaggtgcggtggctcacgcctgtaatcccagcactttgggcagccgaagcaggcggatcacgaggtcaggagttcaagaccagcctagccaacatagtgaaaccccatctctactaaaaatacaaaaattagccaggcatggtggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgtggtgagcagagatcataccactgcactccagcctgggcaacagggcgagactccatctcaaaaaaaaaaaaaaaaagaaaga >DW408471:18-319 (+) gtcgggtgcggtggctcacgcctgtggtcccagcactttgggcggccgaggcgggcggatcgcggggtcaggagttcgagaccagcctggccagcgtggtggggccccgtctctgctgaaaatacagaaattggccaggcatggtggcacatgcctgtgatcccggctgcttgggaggctgaggcaggagagtcgcttgggcccgggaggcggaggttgtggtgggcagagatcatgccactgcactccagcctgggcgacagggcgagactccatctcaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: DW408578, type: ag Aligns to: chr20:60852038-60852266 (++) All mismatches: ag (118), ag (127), ag (153), ag (172), ag (183), ag (220), ag (237), ag (263), ag (264), ag (269), ag (305), gc (310), ag (338), Editing mismatches: 12, all mismatches: 13, alignment length: 229, cluster length: 221, total number of As: 55 Locations in RNA: 118 127 153 172 183 220 237 263 264 269 305 338 Locations in genome: 60852041 60852050 60852076 60852095 60852106 60852143 60852160 60852186 60852187 60852192 60852228 60852261 Upstream nucleotide (in genome): c a t c g t t t a c a c Upstream nucleotide summary: a: 3, c: 4, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): c t g g c a g a t g c c Downstream nucleotide summary: a: 2, c: 4, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 2, ca: 0, cc: 2, cg: 2, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 2, tc: 0, tg: 2, tt: 0, other: 0 >chr20:60852038-60852266 (+) ctcacgcctgtaatcccagcactttgagaggttgaggtaggcagattgcctgaggtcaggagttcgagactagcctggccgacatggtgaaacctcgtttctgctaaaaaatacaaaaaattagccgggcgtggtggcgggtgcctgtaatcccagctactcgggaggctgaggctggagaatcacttgaacctggaggcggaggttgcagtgagccgagatcacgcca >DW408578:115-343 (+) ctcgcgcctgtagtcccagcactttgagaggttgaggtgggcagattgcctgaggtcgggagttcgaggctagcctggccgacatggtgaaacctcgtttctgctgaaaaatacaaaaaattggccgggcgtggtggcgggtgcctgtggtcccggctactcgggaggctgaggctggagaatcacttgagcctgcaggcggaggttgcagtgagccgagatcgcgcca End editing Edited EST: DW427238, type: ag Aligns to: chr20:30878415-30878653 (++) All mismatches: ag (44), ag (45), ag (66), ag (67), ag (93), ag (99), ag (118), ag (169), ag (187), ag (201), ag (202), ag (203), ag (204), ag (253), Editing mismatches: 14, all mismatches: 14, alignment length: 239, cluster length: 210, total number of As: 63 Locations in RNA: 44 45 66 67 93 99 118 169 187 201 202 203 204 253 Locations in genome: 30878418 30878419 30878440 30878441 30878467 30878473 30878492 30878543 30878561 30878575 30878576 30878577 30878578 30878627 Upstream nucleotide (in genome): t a c a g c t t t c a a a g Upstream nucleotide summary: a: 5, c: 3, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): a t a g g g g t g a a a g g Downstream nucleotide summary: a: 5, c: 0, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 2, at: 1, ca: 2, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 0, tg: 2, tt: 1, other: 0 >chr20:30878415-30878653 (+) tgtaatcccagcactttgggaggccaaggcggaaggattgcttgaacccaggagttccagaccagcctgggcaatatagtgagaccttgtttctataacaaataataataataataaattagctcagtatggtggcatgtacctgtagtctcagctactcaaaaggctgaggtgggaggattgcttgagcctaggagttcaaggatgcagtgagctgtgattgcaccactgcactccag >DW427238:41-279 (+) tgtggtcccagcactttgggaggccggggcggaaggattgcttgaacccaggggttccggaccagcctgggcaatatggtgagaccttgtttctataacaaataataataataataaattagctcagtgtggtggcatgtacctgtggtctcagctactcggggggctgaggtgggaggattgcttgagcctaggagttcaaggatgcagtgggctgtgattgcaccactgcactccag End editing Edited EST: DW428751, type: ag Aligns to: chr20:52053678-52053937 (++) All mismatches: ag (15), ag (16), ag (36), ag (71), ag (80), ga (81), ag (85), ag (93), ag (94), ag (99), ag (120), ag (122), ag (139), ag (147), ag (148), ag (193), ag (198), ag (199), ag (202), ag (210), ag (218), ag (234), ag (261), ag (269), Editing mismatches: 23, all mismatches: 24, alignment length: 260, cluster length: 255, total number of As: 72 Locations in RNA: 15 16 36 71 80 85 93 94 99 120 122 139 147 148 193 198 199 202 210 218 234 261 269 Locations in genome: 52053678 52053679 52053699 52053734 52053743 52053748 52053756 52053757 52053762 52053783 52053785 52053802 52053810 52053811 52053856 52053861 52053862 52053865 52053873 52053881 52053897 52053924 52053932 Upstream nucleotide (in genome): n a t c t c t a c c g c c a t a a t c c c a g Upstream nucleotide summary: a: 6, c: 9, g: 2, t: 5, other: 1 Downstream nucleotide (in genome): a t t g g c a t g g t g a g c a t g t g g t a Downstream nucleotide summary: a: 5, c: 2, g: 9, t: 7, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 4, ca: 1, cc: 1, cg: 6, ct: 1, ga: 1, gc: 0, gg: 0, gt: 1, ta: 1, tc: 1, tg: 2, tt: 1, other: 1 >chr20:52053678-52053937 (+) aatcacgtgtgtgttaggactatggattgcacatgacagaaaaatccactcaggccaggcacagtagctcacgcctgtaattccagcactttgggaggccgaggcagatggatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtgtctactaaaaatacaaaaattaggcaggcatggtggcaggtgcctgtgatcccagctactctggaggctgagccaggagaattgcttgaacccg >DW428751:15-274 (+) ggtcacgtgtgtgttaggactgtggattgcacatgacagaaaaatccactcaggccgggcacagtgactcgcgcctgtggttccggcactttgggaggccgaggcgggtggatcacttgaggtcgggagttcgggaccagcctggccaacatggtgaaaccctgtgtctactaaaaatgcaaaggttgggcaggcgtggtggcgggtgcctgtgatcccggctactctggaggctgagccaggagagttgcttggacccg End editing Edited EST: DW433666, type: ag Aligns to: chr20:30209109-30209355 (++) All mismatches: ag (16), ag (17), ag (42), ag (45), ag (72), ag (73), ag (112), ag (113), ag (114), ag (167), ag (183), ag (194), tc (212), ag (215), ag (237), ag (239), Editing mismatches: 15, all mismatches: 16, alignment length: 246, cluster length: 225, total number of As: 59 Locations in RNA: 16 17 42 45 72 73 112 113 114 167 183 194 215 237 239 Locations in genome: 30209109 30209110 30209135 30209138 30209165 30209166 30209205 30209206 30209207 30209261 30209277 30209288 30209309 30209331 30209333 Upstream nucleotide (in genome): n a c g g a a a a c g g c t c Upstream nucleotide summary: a: 5, c: 4, g: 4, t: 1, other: 1 Downstream nucleotide (in genome): a t g g a c a a a g g g a c c Downstream nucleotide summary: a: 6, c: 3, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 0, at: 1, ca: 1, cc: 1, cg: 2, ct: 0, ga: 1, gc: 0, gg: 3, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 1 >chr20:30209109-30209355 (+) aatcccagcactttgagagcctgagcaggaggattgcttgagctcaggagtttgagaacagtctgggcaacatggtgaaaccctgtctctacaaaaaaaatacaagaaattagctgggtgtggtgggctcactcctgtagtccgggctactcagaaggctgaggtgggaggatcgctggagcctggggggcggaggttgcaatgagctgagatcatgccactacactcctgcctggggcatagagtg >DW433666:16-261 (+) ggtcccagcactttgagagcctgagcggggggattgcttgagctcaggagtttgagggcagtctgggcaacatggtgaaaccctgtctctacaaaaggg-tacaagaaattagctgggtgtggtgggctcactcctgtagtccgggctactcggaaggctgaggtggggggatcgctggggcctggggggcggaggtcgcgatgagctgagatcatgccactgcgctcctgcctggggcatagagtg End editing Edited EST: DW465937, type: ag Aligns to: chr20:62552656-62552954 (++) All mismatches: ag (50), ag (51), ag (102), ag (118), ag (126), ag (139), ag (144), ag (158), ag (184), ag (190), ag (194), ag (201), ag (211), ag (225), ag (226), ag (249), at (310), Editing mismatches: 16, all mismatches: 17, alignment length: 298, cluster length: 200, total number of As: 49 Locations in RNA: 50 51 102 118 126 139 144 158 184 190 194 201 211 225 226 249 Locations in genome: 62552689 62552690 62552741 62552757 62552765 62552778 62552783 62552797 62552823 62552829 62552833 62552840 62552850 62552864 62552865 62552888 Upstream nucleotide (in genome): t a c a g t a t t c t g c g a c Upstream nucleotide summary: a: 4, c: 4, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): a t a c a c a g g g c g g a c a Downstream nucleotide summary: a: 6, c: 4, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 1, ca: 2, cc: 0, cg: 2, ct: 0, ga: 2, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr20:62552656-62552954 (+) tgactgaggccgggcctggtggctcacacctgtaatcccagcactttgggaggccgaggctggtggatcacgaggtgtggtgatcaagaccatcctggctaacacggtgaaaccccgtctctactaaaactgcaaaaaattagccgggcgtggtggcgggtgcctgtagtcccagctactcaggaggctgaggcagaagaatggcgtgaacccgggaggcggagcttgcagcaagccgagatagtgccactgcactccagcctgggagacagagcgagactccgtctcaaaaaaaaaaa >DW465937:17-314 (+) tgactgaggccgggcctggtggctcacacctgtggtcccagcactttgggaggccgaggctggtggatcacgaggtgtggtgatcgagaccatcctggctagcacggtggaaccccgtctctgctaagactgcaaaaaattggccgggcgtggtggcgggtgcctgtggtcccggctgctcagggggctgaggcggaagaatggcgtgggcccgggaggcggagcttgcagcgagccgagatagtgccactgcactccagcctgggagacagagcgagactccgtct-aaaaaataaaa End editing Edited EST: DW467602, type: ag Aligns to: chr20:37557480-37557808 (++) All mismatches: ag (85), ag (87), ag (95), ag (96), ag (103), ag (104), ag (130), ag (139), ag (142), ag (147), ag (150), ag (179), ag (180), ag (181), ag (198), ag (237), ag (259), ag (263), ag (269), ag (302), tc (305), ag (327), Editing mismatches: 21, all mismatches: 22, alignment length: 329, cluster length: 243, total number of As: 63 Locations in RNA: 85 87 95 96 103 104 130 139 142 147 150 179 180 181 198 237 259 263 269 302 327 Locations in genome: 37557548 37557550 37557558 37557559 37557566 37557567 37557593 37557602 37557605 37557610 37557613 37557642 37557643 37557644 37557661 37557700 37557722 37557726 37557732 37557765 37557790 Upstream nucleotide (in genome): c c c a t a c c g c g g a a a a g c a g c Upstream nucleotide summary: a: 7, c: 8, g: 5, t: 1, other: 0 Downstream nucleotide (in genome): c g a g a t g c g g g a a c a t g g t g g Downstream nucleotide summary: a: 5, c: 3, g: 10, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 3, ca: 1, cc: 2, cg: 5, ct: 0, ga: 1, gc: 0, gg: 4, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr20:37557480-37557808 (+) ggaacctgggcagttttaactgagaaaggtggtacattacctttaaatccaatgagtattggctgggcacagtggctcaagcctgtaatcccagcactttgggaggctgaggcaggcagatcacgaggtcaggagttcgagaccagcctggccaacatcgtgaaaccccgtctctactaaaaatacaaaaattagctggacgtggtggtgcgtgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacctgggaggtggaggttgtagtgagctgagatcacaccactggactccagctctgggcgacagagca >DW467602:17-345 (+) ggaacctgggcagttttaactgagaaaggtggtacattacctttaaatccaatgagtattggctgggcgcggtggctcgggcctgtggtcccagcactttgggaggctgaggcgggcagatcgcggggtcgggggttcgagaccagcctggccaacatcgtggggccccgtctctactaaagatacaaaaattagctggacgtggtggtgcgtgcctgtagtcccagctacttgggaggctggggcgggagagttgcttgaacctgggaggtggaggttgtagtgggccgagatcacaccactggactccggctctgggcgacagagca End editing Edited EST: BG680620, type: ag Aligns to: chr20:32231445-32231627 (++) All mismatches: ag (139), ag (141), ag (143), ag (145), ag (147), ag (149), ag (151), ag (153), ag (155), ag (157), ag (159), ag (161), ag (163), ag (165), ag (167), ag (169), ag (171), ag (173), ac (177), ga (178), ag (180), Editing mismatches: 19, all mismatches: 21, alignment length: 181, cluster length: 42, total number of As: 21 Locations in RNA: 139 141 143 145 147 149 151 153 155 157 159 161 163 165 167 169 171 173 180 Locations in genome: 32231585 32231587 32231589 32231591 32231593 32231595 32231597 32231599 32231601 32231603 32231605 32231607 32231609 32231611 32231613 32231615 32231617 32231619 32231626 Upstream nucleotide (in genome): t t t t t t t t t t t t t t t t t t t Upstream nucleotide summary: a: 0, c: 0, g: 0, t: 19, other: 0 Downstream nucleotide (in genome): t t t t t t t t t t t t t t t t t t t Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 19, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 19, other: 0 >chr20:32231445-32231627 (+) gcaatatcagctgggcgcttataatcctgacactttgggaggctgagacaggcagatcacttgagcccaggagttcaagcgtagcctggccaacatggcaaaacctcatctctactatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatagtat >BG680620:1-181 (+) gcaatatcagctgggcgcttataatcctgacactttgggaggctgagacaggcagatcacttgagcccaggagttcaagcgtagcctggccaacatggcaaaacctcatctctactatatatatatatat-tatata-atgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatcatgt End editing Edited EST: BF112274, type: ga Aligns to: chr20:61920699-61921078 (++) All mismatches: ga (212), ga (247), ga (271), ga (274), ga (277), ga (278), ga (281), ga (284), ga (286), ga (287), ga (290), ga (298), ga (304), ga (305), ga (307), ga (309), ga (311), ga (314), ga (315), ga (329), ga (332), ga (334), ga (336), ga (337), ga (338), ac (340), ga (341), ga (342), ga (344), ga (345), ga (346), ga (350), ga (351), ga (352), ga (356), ga (357), ga (359), ga (362), ga (363), ga (364), ga (365), ga (375), ga (378), ga (380), Editing mismatches: 43, all mismatches: 44, alignment length: 380, cluster length: 169, total number of Gs: 68 Locations in RNA: 212 247 271 274 277 278 281 284 286 287 290 298 304 305 307 309 311 314 315 329 332 334 336 337 338 341 342 344 345 346 350 351 352 356 357 359 362 363 364 365 375 378 380 Locations in genome: 61920910 61920945 61920969 61920972 61920975 61920976 61920979 61920982 61920984 61920985 61920988 61920996 61921002 61921003 61921005 61921007 61921009 61921012 61921013 61921026 61921029 61921032 61921034 61921035 61921036 61921039 61921040 61921042 61921043 61921044 61921048 61921049 61921050 61921054 61921055 61921057 61921060 61921061 61921062 61921063 61921073 61921076 61921078 Upstream nucleotide (in genome): a c a a t g t g t g c c c g a g t t g t a t c g g a g t g g t g g c g t t g g g t t t Upstream nucleotide summary: a: 6, c: 6, g: 17, t: 14, other: 0 Downstream nucleotide (in genome): g t a g g a t t g c a t g a g t a g c c g c g g c g t g g c g g a g t c g g g c c t n Downstream nucleotide summary: a: 6, c: 9, g: 19, t: 8, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 5, at: 0, ca: 1, cc: 0, cg: 3, ct: 2, ga: 3, gc: 5, gg: 5, gt: 4, ta: 1, tc: 4, tg: 6, tt: 2, other: 1 >chr20:61920699-61921078 (+) gcggccgcgtggtatctcccgagggctgcttggaccctggtgggctgagtgctccgaggaggggtggactccaccttggacagtgggatgtggtgttccacatgtgcctgtttccacgccagcaccttgacttggcagcatggagccaaggtctgtccccgcccaggagggtgccttcctcgggggtagggggacggcccactctgccccagggagtcccttttgatgggaagtgcagtcagcagcgtggaggtgtctgggccaccttcagaaggtggatgtggtggccgagaccccgtccacggagggtgatggcctttcccttct-gcaggtgcgggcaggtgggcctgggaccggtgctggggcctctccttgctgtg >BF112274:1-380 (+) gcggccgcgtggtatctcccgagggctgcttggaccctggtgggctgagtgctccgaggaggggtggactccaccttggacagtgggatgtggtgttccacatgtgcctgtttccacgccagcaccttgacttggcagcatggagccaaggtctgtccccgcccaggagggtgccttcctcgggggtagggggacggcccactctgccccaaggagtcccttttgatgggaagtgcagtcancancatggaggtgtctgggccaccttcaaaaagtaaatatgataaccaagaccccatccacaaaagataataacctttcccttcttacaa-tacaaaccaataaacctaaaaccaatactaaaacctctccttactata End editing Edited EST: AW238966, type: ga Aligns to: chr20:54972262-54972542 (++) All mismatches: ga (189), ga (201), ga (210), ga (232), ga (253), ga (258), ga (270), ga (276), ga (296), ga (305), ga (312), ga (318), ga (325), ga (330), ga (345), ga (352), ga (355), ga (357), ga (378), ga (396), ga (397), ga (398), ga (402), ga (405), ga (408), ga (413), ga (426), ga (436), ga (437), ga (440), ga (443), ga (444), ga (453), ga (458), ga (465), ga (467), ga (468), Editing mismatches: 37, all mismatches: 37, alignment length: 281, cluster length: 280, total number of Gs: 73 Locations in RNA: 189 201 210 232 253 258 270 276 296 305 312 318 325 330 345 352 355 357 378 396 397 398 402 405 408 413 426 436 437 440 443 444 453 458 465 467 468 Locations in genome: 54972262 54972274 54972283 54972305 54972326 54972331 54972343 54972349 54972369 54972378 54972385 54972391 54972398 54972403 54972418 54972425 54972428 54972430 54972451 54972469 54972470 54972471 54972475 54972478 54972481 54972486 54972499 54972509 54972510 54972513 54972516 54972517 54972526 54972531 54972538 54972540 54972541 Upstream nucleotide (in genome): n c c c g a g t t a t c t t a t c t t t g g t t t c t a g t t g t t a a g Upstream nucleotide summary: a: 6, c: 6, g: 7, t: 17, other: 1 Downstream nucleotide (in genome): g a c t c g a a t g a a c t g c t t g g g t c a c a a g a t g c c c a g t Downstream nucleotide summary: a: 10, c: 9, g: 10, t: 8, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 5, at: 0, ca: 3, cc: 1, cg: 0, ct: 2, ga: 2, gc: 2, gg: 1, gt: 2, ta: 4, tc: 6, tg: 3, tt: 4, other: 1 >chr20:54972262-54972542 (+) ggaatggaaaacgatgacaccgcagttcagtatgcaattggtcgttcagatactgttgcccctggcacagggattgacctggaatttgatgcagatgttcagactatgtccccagaggcttctgagtacgaaacatgctatgtcacatcacataaaggaccatgccgtgtagctacctatagtagagatggacagttaatagctactgggtctgctgatgcttcgataaagatacttgacacagagaggatgttggccaaaagtgccatgccaatagaggt >AW238966:189-469 (+) agaatggaaaacaatgacaccacagttcagtatgcaattggtcattcagatactgttgcccctgacacaaggattgacctgaaatttaatgcagatgttcagactatatccccagaagcttctaagtacaaaacatactatatcacatcacataaaagaccataccatatagctacctatagtagagatagacagttaatagctactaaatctactaatacttcaataaagatacttaacacagagaaaatattaaccaaaagtaccataccaataaaaat End editing Edited EST: DA677665, type: ag Aligns to: chr21:39605397-39605896 (++) All mismatches: ag (74), ag (163), ag (164), ag (165), ag (166), ag (190), ag (193), ag (200), ag (201), ag (202), ag (217), ag (228), ag (234), Editing mismatches: 13, all mismatches: 13, alignment length: 500, cluster length: 161, total number of As: 60 Locations in RNA: 74 163 164 165 166 190 193 200 201 202 217 228 234 Locations in genome: 39605470 39605559 39605560 39605561 39605562 39605586 39605589 39605596 39605597 39605598 39605613 39605624 39605630 Upstream nucleotide (in genome): a a a a a a c t a a c c t Upstream nucleotide summary: a: 8, c: 3, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g a a a g t a a a g c g a Downstream nucleotide summary: a: 7, c: 1, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 3, at: 1, ca: 1, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 0, tt: 0, other: 0 >chr21:39605397-39605896 (+) tatatgtctcatatcacattttgttcctctgttccacctttattactttcttttgtattaaattaatgtttgaagtataatattttaatttttagtgatttttagtatatttttagctgttttcttagtggttgccctagggctgtgtagactgactaagaaaaaagagagaagactcaaattattaaaatcaagaattaaagagggaatatcatcactaattttacagaaataaaaattattataagggaatagtatgaacagtttatatattaacttatcagaatgatgtgtactaccttaatgcaagtaaaatatagacactttactcttacatagctctattctctcttcctcttttttaatattgttattatacatattacctatatatatgtaacgaacctaaaaatatattgttataattattactttatatagttttatgtcttttaaagaagctgagagaagaaaggagagaaatacgtatttgtagaatt >DA677665:1-500 (+) tatatgtctcatatcacattttgttcctctgttccacctttattactttcttttgtattaaattaatgtttgaggtataatattttaatttttagtgatttttagtatatttttagctgttttcttagtggttgccctagggctgtgtagactgactaagaagggggagagaagactcaaattattaaagtcgagaattggggagggaatatcatcgctaattttacggaaatgaaaattattataagggaatagtatgaacagtttatatattaacttatcagaatgatgtgtactaccttaatgcaagtaaaatatagacactttactcttacatagctctattctctcttcctcttttttaatattgttattatacatattacctatatatatgtaacgaacctaaaaatatattgttataattattactttatatagttttatgtcttttaaagaagctgagagaagaaaggagagaaatacgtatttgtagaatt End editing Edited EST: DA952708, type: ag Aligns to: chr21:42834146-42834724 (++) All mismatches: ag (77), ag (117), ag (123), ag (153), ag (154), ag (158), ag (159), ag (181), ag (184), ag (199), ag (242), ag (259), ga (456), Editing mismatches: 12, all mismatches: 13, alignment length: 581, cluster length: 182, total number of As: 36 Locations in RNA: 77 117 123 153 154 158 159 181 184 199 242 259 Locations in genome: 42834221 42834261 42834267 42834297 42834298 42834301 42834302 42834324 42834327 42834342 42834385 42834402 Upstream nucleotide (in genome): t c c c a c a g t c t c Upstream nucleotide summary: a: 2, c: 6, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g a g a g a t g g t g t Downstream nucleotide summary: a: 3, c: 0, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 3, cc: 0, cg: 1, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 3, tt: 0, other: 0 >chr21:42834146-42834724 (+) aaaacaggaaaacgtgggcaagtttagaactccctagagacttgttgaatgtc-ttttttttttttttaattagatagagtctctttctgttgcttaggctggagtgcactggcacaatctcagctcactggaacctccacttccctggttcaagc-aattctcctgcctcagcctcctgagtagcttacagtagatcatgggcacctaccatcatgcctggctactttttgtatttttgtagagatggggtttcaccatgttggccaggctggtcttgaacttttgacatcaggtgatctgcctgccttggcctcccaaaatgctgggagtacaggggtgagccaccacgcccagccttttgaatggctttgacaaaaatgctgataatgatatggacaatgaaattcaggctgaggtgctctcagataagagatgaggaacttgttggtaaccggagcaaaggttactcttgttatgttttagcaaagagactggtggcattttgctcctgccttagagatttgtggaactttgaacttgagagagatgatttagggtatttggtgtaagaaatttcta >DA952708:1-581 (+) aaaacaggaaaacgtgggcaagtttagaactccctagagacttgttgaatgtctttttttttttttttaattagatggagtctctttctgttgcttaggctggagtgcactggcacgatctcggctcactggaacctccacttccctggttcgggcaggttctcctgcctcagcctcctgggtggcttacagtagatcgtgggcacctaccatcatgcctggctactttttgtatttttgtggagatggggtttcaccgtgttggccaggctggtcttgaacttttgacatcaggtgatctgcctgccttggcctcccaaaatgctgggagtacaggggtgagccaccacgcccagccttttgaatggctttgacaaaaatgctgataatgatatggacaatgaaattcaggctgaggtgctctcagataagagatgaggaacttgttggtaaccagagcaaaggttactcttgttatgttttagcaaagagactggtggcattttgctcctgccttagagatttgtggaactttgaacttgagagagatgatttagggtatttggtgtaagaaatttcta End editing Edited EST: DW424758, type: ag Aligns to: chr21:37515920-37516190 (++) All mismatches: ag (17), ag (36), ag (60), ag (98), ag (128), ag (133), ag (160), ag (181), ag (214), ag (227), ag (230), ag (245), tc (273), Editing mismatches: 12, all mismatches: 13, alignment length: 271, cluster length: 229, total number of As: 59 Locations in RNA: 17 36 60 98 128 133 160 181 214 227 230 245 Locations in genome: 37515920 37515939 37515963 37516001 37516031 37516036 37516063 37516084 37516117 37516130 37516133 37516148 Upstream nucleotide (in genome): n g g a t g c c t g c c Upstream nucleotide summary: a: 1, c: 4, g: 4, t: 2, other: 1 Downstream nucleotide (in genome): t g g a t g g g c t t g Downstream nucleotide summary: a: 1, c: 1, g: 6, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 3, ct: 1, ga: 0, gc: 0, gg: 3, gt: 1, ta: 0, tc: 1, tg: 0, tt: 1, other: 1 >chr21:37515920-37516190 (+) ataatcctagcactttgggaggccaaggcaggcagatctcctgagctcaggagtttgcgaccagcccggccaacatggagaaaccccgtttctacgaaaaatacaaaaattatttgagtgcagtggtgtgtgcctgtgggcccagttatttgtggggctgagacaggaggatcacttgagtctgggaagtggaggctacagtgagccgagatcatgccactgcactccagcttggctggcagagtgagattctgtctcaaaaaaaaaaaaa >DW424758:17-287 (+) gtaatcctagcactttggggggccaaggcaggcagatctcctgggctcaggagtttgcgaccagcccggccaacatggagagaccccgtttctacgaaaaatacaaaaattgtttgggtgcagtggtgtgtgcctgtgggcccggttatttgtggggctgagacgggaggatcacttgagtctgggaagtggaggctgcagtgagccgaggtcgtgccactgcactccggcttggctggcagagtgagattctgtcccaaaaaaaaaaaaa End editing Edited EST: DW434558, type: ag Aligns to: chr21:45144481-45144720 (++) All mismatches: ag (17), ag (26), ag (28), ag (39), ag (44), ag (77), ag (98), ga (99), ag (138), ag (156), ag (200), ag (224), ag (241), ag (243), ag (247), Editing mismatches: 14, all mismatches: 15, alignment length: 241, cluster length: 230, total number of As: 65 Locations in RNA: 17 26 28 39 44 77 98 138 156 200 224 241 243 247 Locations in genome: 45144481 45144490 45144492 45144503 45144508 45144541 45144561 45144601 45144619 45144663 45144687 45144704 45144706 45144710 Upstream nucleotide (in genome): n g g c g t a t a c c c g g Upstream nucleotide summary: a: 2, c: 4, g: 5, t: 2, other: 1 Downstream nucleotide (in genome): g g t c g g g g g g c g g g Downstream nucleotide summary: a: 0, c: 2, g: 11, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 0, cc: 2, cg: 2, ct: 0, ga: 0, gc: 0, gg: 4, gt: 1, ta: 0, tc: 0, tg: 2, tt: 0, other: 1 >chr21:45144481-45144720 (+) aggaggccgagatggggggatcacttgagcctgggagtttgagaccaccgtgggcaacatagcaagactccagctctac-aagaaaaaaaaaaaaaagctggctatgtgactcacatctgtagtcccacctacttgggaaggtgaagtgggaggatcacctgatcccaggaggtggaggatgcagtgacctgtgatggtgccactgcactccagcctgggtgacagagtgagaccctgtct >DW434558:17-257 (+) gggaggccggggtggggggatcgcttgggcctgggagtttgagaccaccgtgggcaacatggcaagactccagctctacaagaaaaaaaaaaaaaaagctggctatgtgactcacatctgtggtcccacctacttgggagggtgaagtgggaggatcacctgatcccaggaggtggaggatgcggtgacctgtgatggtgccactgcgctccagcctgggtgacggggtgggaccctgtct End editing Edited EST: AW629888, type: ga Aligns to: chr21:38536351-38536517 (++) All mismatches: ga (200), ga (209), ga (214), ga (218), ga (229), ga (233), ga (275), ga (281), ga (284), ga (288), ga (295), ga (303), ga (304), ga (305), ga (327), Editing mismatches: 15, all mismatches: 15, alignment length: 167, cluster length: 128, total number of Gs: 27 Locations in RNA: 200 209 214 218 229 233 275 281 284 288 295 303 304 305 327 Locations in genome: 38536375 38536384 38536389 38536393 38536404 38536408 38536450 38536456 38536459 38536463 38536470 38536478 38536479 38536480 38536502 Upstream nucleotide (in genome): a t t t g a c t t c a t g g t Upstream nucleotide summary: a: 3, c: 2, g: 3, t: 7, other: 0 Downstream nucleotide (in genome): g c c a c a a t t c a g g a t Downstream nucleotide summary: a: 5, c: 4, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 0, ca: 1, cc: 1, cg: 0, ct: 0, ga: 1, gc: 1, gg: 1, gt: 0, ta: 1, tc: 2, tg: 1, tt: 3, other: 0 >chr21:38536351-38536517 (+) agcaatcgaaattcagattctgcaggcccatttgcagtgcctgaccatcttcggcaagatgtagaagaattcgaagctctctatgaccaacacagtaacgaatatgttgtccgcaataagaagctatgggacatgaacccaaaacaaaaatgttcaactctatatga >AW629888:176-342 (+) agcaatcgaaattcagattctgcaagcccatttacagtacctaaccatcttcgacaaaatgtagaagaattcgaagctctctatgaccaacacagtaacaaatatattatccacaataaaaagctataaaacatgaacccaaaacaaaaatattcaactctatatga End editing Edited EST: DB162448, type: ag Aligns to: chr22:40299473-40299761 (++) All mismatches: ag (41), ag (63), ag (73), ag (122), ag (127), ag (139), ag (144), ag (149), ag (183), ag (189), ag (198), ag (218), ag (244), ag (261), Editing mismatches: 14, all mismatches: 14, alignment length: 289, cluster length: 221, total number of As: 52 Locations in RNA: 41 63 73 122 127 139 144 149 183 189 198 218 244 261 Locations in genome: 40299513 40299535 40299545 40299594 40299599 40299611 40299616 40299621 40299655 40299661 40299670 40299690 40299716 40299733 Upstream nucleotide (in genome): c t c c c t g t t t c c a c Upstream nucleotide summary: a: 1, c: 7, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): c c a c g g g c t g g g g g Downstream nucleotide summary: a: 1, c: 4, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 1, cc: 2, cg: 4, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 2, tg: 2, tt: 1, other: 0 >chr22:40299473-40299761 (+) atgagtcttttttttttttttttttttgagacagggtctcactctgtcactcaggctggagtacagtggcacaatcacagctcactgcagcctcaactaccctgggtttagtgatcctcccacctcagcctctcaagtagctgagactacaggtacacaccaccacacctggctaatattgtatttttagtagagacagggttttgccatgtttcccaggctggtcttgaactcctgaactcaagcgattcgcctgcctcagcctcccaaagtgttgggattacaggtg >DB162448:1-289 (+) atgagtcttttttttttttttttttttgagacagggtctcgctctgtcactcaggctggagtgcagtggcacgatcacagctcactgcagcctcaactaccctgggtttagtgatcctcccgcctcggcctctcaagtggctgggactgcaggtacacaccaccacacctggctaatattgtgtttttggtagagacggggttttgccatgtttcccgggctggtcttgaactcctgaactcaggcgattcgcctgcctcggcctcccaaagtgttgggattacaggtg End editing Edited EST: DW426652, type: ag Aligns to: chr22:18581185-18581422 (++) All mismatches: ag (27), ag (32), ag (41), ag (42), ag (50), ag (57), ag (63), ag (68), ag (69), ag (70), ag (72), ag (75), ag (77), ag (78), ag (81), ag (101), ag (107), ag (108), ag (124), ag (133), ag (140), ag (163), ag (172), ag (176), ag (183), ag (191), ag (196), ag (219), ga (239), ga (246), Editing mismatches: 28, all mismatches: 30, alignment length: 238, cluster length: 193, total number of As: 55 Locations in RNA: 27 32 41 42 50 57 63 68 69 70 72 75 77 78 81 101 107 108 124 133 140 163 172 176 183 191 196 219 Locations in genome: 18581194 18581199 18581208 18581209 18581217 18581224 18581230 18581235 18581236 18581237 18581239 18581242 18581244 18581245 18581248 18581268 18581274 18581275 18581291 18581300 18581307 18581330 18581339 18581343 18581350 18581358 18581363 18581386 Upstream nucleotide (in genome): a c c a g c t a a a t a a a t c t a g g g c c g g c c g Upstream nucleotide summary: a: 9, c: 8, g: 7, t: 4, other: 0 Downstream nucleotide (in genome): g g a c a c c a a t c a a t g c a t g g g g g g t c c g Downstream nucleotide summary: a: 7, c: 7, g: 10, t: 4, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 1, at: 3, ca: 1, cc: 4, cg: 3, ct: 0, ga: 1, gc: 0, gg: 5, gt: 1, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr22:18581185-18581422 (+) gggaggccaagaccagcctggccaacatgatgaaaccccacctctactaaaaatacaaaaattagctgggtgtgatggtgcacacctttaatcccagctactcaggaggaggctgaggcaggagaatctctggaacctgggaggcagaggttgcagtgagctgagatcctgccactgcactccagtctgggcgacagagtgagattctgtctcaaaaaaaagaaaaaagaaaaaaaaa >DW426652:18-255 (+) gggaggccaggaccggcctggccggcatgatggaaccccgcctctgctaagggtgcagaggttggctgggtgtgatggtgcacgcctttggtcccagctactcagggggaggctggggcaggggaatctctggaacctgggaggcggaggttgcggtgggctgaggtcctgccgctgcgctccagtctgggcgacagagtgggattctgtctcaaaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: AA320257, type: ag Aligns to: chr22:41500753-41501057 (++) All mismatches: ag (10), ag (43), ag (62), ag (66), ag (70), ag (76), ag (86), ag (88), ag (95), ag (96), ag (101), ag (107), ag (110), ag (114), ag (162), ag (183), ag (184), ag (229), ca (283), ag (289), ag (290), Editing mismatches: 20, all mismatches: 21, alignment length: 306, cluster length: 280, total number of As: 87 Locations in RNA: 10 43 62 66 70 76 86 88 95 96 101 107 110 114 162 183 184 229 289 290 Locations in genome: 41500762 41500795 41500814 41500818 41500822 41500828 41500838 41500840 41500847 41500848 41500853 41500859 41500862 41500866 41500914 41500935 41500936 41500981 41501040 41501041 Upstream nucleotide (in genome): c c c a c c a c a a c t t a a c a a a a Upstream nucleotide summary: a: 10, c: 8, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): c g g t a g c t a c t c a t t a g c a t Downstream nucleotide summary: a: 5, c: 5, g: 4, t: 6, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 1, at: 4, ca: 2, cc: 1, cg: 3, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr22:41500753-41501057 (+) gtggcctacacctgtaatcccagcactttgggaggctgaggcaggtggattacttgaggtcaggaattcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggcatggccgggcacggtggcttacgcctgtaatcccagcactttgggaggccaagacgggcagatcacgaggtcaggagattgaaaccatcctgggtaacacggtgtaaccccgtctctactaaaaatacaaaaaaattaaccccgtctctact-aaaaatacagaaaaattagcc >AA320257:1-306 (+) gtggcctacgcctgtaatcccagcactttgggaggctgaggcgggtggattacttgaggtcgggagttcgagaccggcctggccagcgtggtgaggccccgtctctgctgaaagtacaaaaattagctgggcatggccgggcacggtggcttacgnctgtagtcccagcactttgggaggccgggacgggcagatcacgaggtcaggagattgaaaccatcctgggtagcacggtgtaaccccgtntctactaaaaatacaanaaaattaaccccgtctctaattaaaggtacagaaaaattagcc End editing Edited EST: R19303, type: ag Aligns to: chr2:204169943-204170161 (++) All mismatches: ag (37), ag (46), ag (51), ag (75), ag (82), ag (121), ag (135), ag (149), ag (157), ag (163), ag (166), ag (172), ag (180), ag (195), ag (220), Editing mismatches: 15, all mismatches: 15, alignment length: 220, cluster length: 183, total number of As: 39 Locations in RNA: 37 46 51 75 82 121 135 149 157 163 166 172 180 195 220 Locations in genome: 204169979 204169988 204169993 204170017 204170024 204170063 204170077 204170091 204170099 204170105 204170108 204170114 204170122 204170137 204170161 Upstream nucleotide (in genome): c a c c a t a a t t t c c g t Upstream nucleotide summary: a: 4, c: 5, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g t g g g c c t t g g g c t n Downstream nucleotide summary: a: 0, c: 3, g: 7, t: 4, other: 1 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 2, ca: 0, cc: 1, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 1, tg: 2, tt: 1, other: 1 >chr2:204169943-204170161 (+) gagaccgagtctccctctgtcaccaggctggagtgcagtggtgcaatctcagctcactgcaacctccccctctcaggttcaagtaattctcctgcctcagcctgccgagtagctgggactacagtcgcacgccaaccacccccagctaatttttttatttttagtagagacaggatttcaccatgtttgccagga-tggtctcgatctcttgtgctcata >R19303:1-220 (+) gagaccgagtctccctctgtcaccaggctggagtgcggtggtgcagtctcggctcactgcaacctccccctctcgggttcaggtaattctcctgcctcagcctgccgagtagctgggactgcagtcgcacgccagccacccccagctagtttttttgtttttggtggagacgggatttcgccatgtttgccagggatggtctcgatctcttgtgctcatg End editing Edited EST: DA312958, type: ag Aligns to: chr2:75895009-75895558 (++) All mismatches: ag (98), ag (137), ag (147), ag (155), ag (161), ag (166), ag (167), ag (174), ag (179), ag (180), ag (194), ag (213), ag (217), ag (225), ag (226), ag (238), ag (254), ag (255), ag (262), ag (265), ag (267), ag (269), ag (270), ag (313), ag (314), ag (319), ag (320), ag (324), ag (332), ag (334), ag (344), ag (427), ag (492), ag (493), Editing mismatches: 34, all mismatches: 34, alignment length: 550, cluster length: 396, total number of As: 157 Locations in RNA: 98 137 147 155 161 166 167 174 179 180 194 213 217 225 226 238 254 255 262 265 267 269 270 313 314 319 320 324 332 334 344 427 492 493 Locations in genome: 75895106 75895145 75895155 75895163 75895169 75895174 75895175 75895182 75895187 75895188 75895202 75895221 75895225 75895233 75895234 75895246 75895262 75895263 75895270 75895273 75895275 75895277 75895278 75895321 75895322 75895327 75895328 75895332 75895340 75895342 75895352 75895435 75895500 75895501 Upstream nucleotide (in genome): t t g a a t a t a a t a a t a g t a g c a t a t a t a a a g a c a a Upstream nucleotide summary: a: 18, c: 2, g: 4, t: 10, other: 0 Downstream nucleotide (in genome): g a a g c a a g a c c a a a g g a a t a t a t a g a a c g c a t a c Downstream nucleotide summary: a: 17, c: 6, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 8, ac: 4, ag: 4, at: 2, ca: 1, cc: 0, cg: 0, ct: 1, ga: 1, gc: 1, gg: 1, gt: 1, ta: 7, tc: 1, tg: 2, tt: 0, other: 0 >chr2:75895009-75895558 (+) atataatgcttaaaactatgatataaaaactatagccagaacaatcatggttggctactaattgatatatagttttatggcagactaggtttccattagcaaccagatgaatcaatttccactaacccttttctataattttgatgaatgtgtaagttaaacattaaagagctagagaaactggtgcctgagtacaagaactggaatgcgaaaacaaacccattaagaccctgcctgagttttcccagatcctaaagtctgatcaaataatgaaagcattcttacacatactctttgtaccagggcccacttaagattaaaaaactttccaagactttagagaaagctttacagaccccagacggtagttagattgtacagactgaatgaaacactctcacttgtagatgcactctcccatgtagcatggagcttagaatgcatataagtgctaaagaaaacaaaacaaaacaaaacaaaacaaaacaaaaaaccaaattgtaactttcagttggtctggtgagttgctacaaccttttccctgtaactg >DA312958:1-550 (+) atataatgcttaaaactatgatataaaaactatagccagaacaatcatggttggctactaattgatatatagttttatggcagactaggtttccattggcaaccagatgaatcaatttccactaacccttttctatgattttgatggatgtgtaggttaagcattggagagctggagaggctggtgcctgagtgcaagaactggaatgcgaagacagacccattgggaccctgcctgggttttcccagatcctggagtctggtcgagtggtgaaagcattcttacacatactctttgtaccagggcccacttgggattggaaagctttccagggctttagagagagctttacagaccccagacggtagttagattgtacagactgaatgaaacactctcacttgtagatgcactctcccatgtagcgtggagcttagaatgcatataagtgctaaagaaaacaaaacaaaacaaaacaaaacaaaacaaaaggccaaattgtaactttcagttggtctggtgagttgctacaaccttttccctgtaactg End editing Edited EST: DA263219, type: ag Aligns to: chr2:170648429-170648982 (++) All mismatches: gt (42), ag (112), ag (122), ag (144), ag (145), ag (150), ag (190), ag (192), ag (200), ag (204), ag (213), ag (214), ag (221), ag (239), ag (251), ag (253), ag (272), ag (280), ag (283), ag (292), ag (318), ag (349), Editing mismatches: 21, all mismatches: 22, alignment length: 555, cluster length: 238, total number of As: 67 Locations in RNA: 112 122 144 145 150 190 192 200 204 213 214 221 239 251 253 272 280 283 292 318 349 Locations in genome: 170648539 170648549 170648571 170648572 170648577 170648617 170648619 170648627 170648631 170648640 170648641 170648648 170648666 170648678 170648680 170648699 170648707 170648710 170648719 170648745 170648776 Upstream nucleotide (in genome): a c t a c c g a a c a c t a a c t a t c g Upstream nucleotide summary: a: 8, c: 7, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): g g a t g g a a g a c a a a t g t t c c g Downstream nucleotide summary: a: 7, c: 3, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 2, at: 3, ca: 2, cc: 1, cg: 4, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 0, tt: 1, other: 0 >chr2:170648429-170648982 (+) ttaggcatacacctaacagaaatgagtgcagaagacatggagaagaacgttcagaatagctttattcataacagc-aaaaaactagaaacaacaaaatggtcagaaacagaagaatgggccagacgtcgtggctcactcctgtaatcccagcactttgggaggccaaggtggatggatcccttgaggtcagaagtttgaaacaagcctggccaacatggcaaaaccctgtctctacttaaaacagtacaaaaattagccatgcatggtggcaggcacctataatcccagctacttgggatattgaggcacgagaatcacttgaacccaggggggtagaggttgcggtgagccgagattgcgccactgcactctagcctgtgcaacagagtgagcctctgtctcaaaaaaaggaaaagaaatggaagaatggataaatcagttgtggtatgtgcgtataccacatgttgtggactgtttgtagttccccaaaattcatacattgacatcctaacctccagtgggatggtattaggaagtggggcctttgggaggta >DA263219:1-555 (+) ttaggcatacacctaacagaaatgagtgcagaagacatggataagaacgttcagaatagctttattcataacagcaaaaaaactagaaacaacaaaatggtcagaaacagaggaatgggccggacgtcgtggctcactcctgtggtcccggcactttgggaggccaaggtggatggatcccttgaggtcgggagtttgagacaggcctggccggcatggcgaaaccctgtctctacttgaaacagtacaagagttagccatgcatggtggcgggcacctgtagtcccagctgcttgggatattgaggcacgagaatcgcttgaacccaggggggtagaggttgcggtgggccgagattgcgccactgcactctagcctgtgcaacagagtgagcctctgtctcaaaaaaaggaaaagaaatggaagaatggataaatcagttgtggtatgtgcgtataccacatgttgtggactgtttgtagttccccaaaattcatacattgacatcctaacctccagtgggatggtattaggaagtggggcctttgggaggta End editing Edited EST: DA230355, type: ag Aligns to: chr2:24325216-24325783 (++) All mismatches: ag (137), ag (138), ag (146), ag (164), ag (194), ag (216), ag (217), ag (233), ag (248), ag (264), ag (274), ag (301), ag (316), Editing mismatches: 13, all mismatches: 13, alignment length: 570, cluster length: 178, total number of As: 51 Locations in RNA: 137 138 146 164 194 216 217 233 248 264 274 301 316 Locations in genome: 24325352 24325353 24325361 24325379 24325407 24325429 24325430 24325446 24325461 24325477 24325487 24325514 24325529 Upstream nucleotide (in genome): t a c c a c a t t c t c a Upstream nucleotide summary: a: 4, c: 5, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a t c g g a a g g g g g c Downstream nucleotide summary: a: 3, c: 2, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 1, ca: 1, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 3, tt: 0, other: 0 >chr2:24325216-24325783 (+) gatatgctcaggaaagattcgggaagtaaaaatgttaattttaatacatttttgctaaattttttggatcaaatccttttaccctatctcatgttttaaatgtattttcaggctgggagtggtggctcacgcctgtaattccagcactttggaagcccaaggcaggc-ggatcag-ctgaggtcaggaatttaagaccagtctggctaacatggcaaaaccctgtctctattagaagtacaaaaattagctgggtatggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaaccctggaggtggaggttgcagtgagctgagatcatgccattgcactccagcctgggcaacagagtgagactctgtctcaaaaaagaaaccaaaaaacaaaataaatgtattttcattaacatatcggagctgcagacttaactcatttatggaaaacatctgtgacattcttattggcaaaagcagtcctcactgttaaactaatcagccaaatcaaattactttgtatcagaaaaagtttctcattttttaat >DA230355:1-570 (+) gatatgctcaggaaagattcgggaagtaaaaatgttaattttaatacatttttgctaaattttttggatcaaatccttttaccctatctcatgttttaaatgtattttcaggctgggagtggtggctcacgcctgtggttccagcgctttggaagcccaaggcgggcnggatcagcctgaggtcaggaatttaggaccagtctggctaacatggcggaaccctgtctctattggaagtacaaaaattggctgggtatggtggcgggtgcctgtggtcccagctactcaggaggctgaggcgggagaatcgcttgagccctggaggtggaggttgcagtgagctgagatcatgccattgcactccagcctgggcaacagagtgagactctgtctcaaaaaagaaaccaaaaaacaaaataaatgtattttcattaacatatcggagctgcagacttaactcatttatggaaaacatctgtgacattcttattggcaaaagcagtcctcactgttaaactaatcagccaaatcaaattactttgtatcagaaaaagtttctcattttttaat End editing Edited EST: DA187989, type: ag Aligns to: chr2:96935947-96936497 (++) All mismatches: ag (21), ag (49), ag (50), ag (65), ag (66), ag (71), ag (75), ag (95), ag (101), ag (110), ag (111), ag (146), ag (150), ag (171), ag (176), ag (281), Editing mismatches: 16, all mismatches: 16, alignment length: 552, cluster length: 260, total number of As: 68 Locations in RNA: 21 49 50 65 66 71 75 95 101 110 111 146 150 171 176 281 Locations in genome: 96935967 96935995 96935996 96936011 96936012 96936017 96936021 96936041 96936047 96936056 96936057 96936092 96936096 96936116 96936121 96936226 Upstream nucleotide (in genome): c c a c a g g c c c a a t c a c Upstream nucleotide summary: a: 5, c: 8, g: 2, t: 1, other: 0 Downstream nucleotide (in genome): g a c a g g a a g a c a g c t a Downstream nucleotide summary: a: 7, c: 3, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 1, ca: 5, cc: 1, cg: 2, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr2:96935947-96936497 (+) gaatactttatgatggggccaggcgctgtggctcacgcctgtaatcccaacactttgggaggccaaggtgagtgaatcatgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggc-gtgttggcacgcacccaatcccagctactcagaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagattgcgccactgcactccagcctggtgatggagcaagactccatctaaagaaaaaaaaaaaaaactttatgatggctgggcccagtggctcatggcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggtctggagtttgagaccagcctgtccaatgtgataaaaccctgtctctactgaaaatacaaaaattagccgggcatggtggcacatgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggagggggaggttgcagtcagcca >DA187989:1-552 (+) gaatactttatgatggggccgggcgctgtggctcacgcctgtaatcccggcactttgggaggccggggtgggtggatcatgaggtcaggagttcgagaccggcctgaccggcatggtgaaaccccgtctctactaaaaatacaaagattggctgggcngtgttggcacgcgcccagtcccagctactcagaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagattgcgccactgcactccagcctggtgatggagcgagactccatctaaagaaaaaaaaaaaaaactttatgatggctgggcccagtggctcatggcctgtaatcccagcactttgggaggctgaggcaggtggatcacttgaggtctggagtttgagaccagcctgtccaatgtgataaaaccctgtctctactgaaaatacaaaaattagccgggcatggtggcacatgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggagggggaggttgcagtcagcca End editing Edited EST: DA364252, type: ag Aligns to: chr2:242643522-242644012 (++) All mismatches: ag (198), ag (200), ag (221), ag (229), ag (247), ag (252), ag (266), ag (297), ag (300), ag (303), ag (306), ag (308), ag (309), ag (315), ag (323), ag (355), ag (371), ag (374), ag (377), ag (382), ag (396), ag (407), ag (411), ag (445), ag (452), Editing mismatches: 25, all mismatches: 25, alignment length: 491, cluster length: 255, total number of As: 70 Locations in RNA: 198 200 221 229 247 252 266 297 300 303 306 308 309 315 323 355 371 374 377 382 396 407 411 445 452 Locations in genome: 242643719 242643721 242643742 242643750 242643768 242643773 242643787 242643818 242643821 242643824 242643827 242643829 242643830 242643836 242643844 242643876 242643892 242643895 242643898 242643903 242643917 242643928 242643932 242643966 242643973 Upstream nucleotide (in genome): c c g g g c a a t a t c a t c c g a c g t g c a a Upstream nucleotide summary: a: 7, c: 8, g: 6, t: 4, other: 0 Downstream nucleotide (in genome): c c g g g g g c a a c a a g t g g t c a g g a g a Downstream nucleotide summary: a: 7, c: 5, g: 11, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 2, at: 1, ca: 2, cc: 3, cg: 2, ct: 1, ga: 1, gc: 0, gg: 5, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr2:242643522-242644012 (+) gtttccaagtttccctctcccttctttgacttctgacagcttccgaagtgtgcacacagcctcttgtcagcactgtttggtacctgcatctaaaaatgagatcacagtccttccgctccgcaaaccctgacagagacagaatacagagtgggcttgtagacttgaagtataaaacttttggccagtcctggtggctcacacctgtaatcccagcactttgagaggccgaggtgggcggatcacctgaggtcaggagttcgagacaagcctggccaaccttgtgaaaccccgtctcaactaaaaatacaaaaactagccgggcatggtggcatgtgcctgtaatcccagctactcaggaggcggaggcgtgagaatcacttgaacctgggaggtgtaggttgcagtgagccaagatcgcaccactgcactccagcctgggcaacaagagtgaaactccatctcaaaaaaaaaagacagaaaacctttggagg >DA364252:1-491 (+) gtttccaagtttccctctcccttctttgacttctgacagcttccgaagtgtgcacacagcctcttgtcagcactgtttggtacctgcatctaaaaatgagatcacagtccttccgctccgcaaaccctgacagagacagaatacagagtgggcttgtagacttgaagtataaaacttttggccagtcctggtggctcgcgcctgtaatcccagcactttgggaggccggggtgggcggatcacctggggtcgggagttcgagacaggcctggccaaccttgtgaaaccccgtctcagctgaagatgcggaaactggccgggcgtggtggcatgtgcctgtaatcccagctactcgggaggcggaggcgtgggagtcgcttggacctgggaggtgtgggttgcagtgggccgagatcgcaccactgcactccancctgggcaacaggagtgagactccatctcaaaaaaaaaagacagaaaacctttggagg End editing Edited EST: DA952838, type: ag Aligns to: chr2:231398594-231399154 (++) All mismatches: ag (267), ag (276), ag (343), ag (358), ag (364), ag (372), ag (378), ag (379), ag (382), ag (402), ag (408), ag (418), ag (431), ag (441), Editing mismatches: 14, all mismatches: 14, alignment length: 562, cluster length: 175, total number of As: 45 Locations in RNA: 267 276 343 358 364 372 378 379 382 402 408 418 431 441 Locations in genome: 231398859 231398868 231398935 231398950 231398956 231398964 231398970 231398971 231398974 231398994 231399000 231399010 231399023 231399033 Upstream nucleotide (in genome): c a a c t t a a t c t t g a Upstream nucleotide summary: a: 5, c: 3, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): c t c t c c a t g c g c g t Downstream nucleotide summary: a: 1, c: 6, g: 3, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 3, ca: 0, cc: 2, cg: 0, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 3, tg: 2, tt: 0, other: 0 >chr2:231398594-231399154 (+) ttaaaattgtttataaggttttaaaaattacttttaatattagtaatacactatacaaaggtgaaatttggttttctcttttgaacaaaattttcatatgagagctaatgaaatatttttatttaccttttgaataactacagggtgcaaaaaaaggaggaaaaagacatttaggtggcctcatgc-tgtctttattaggtttcattgtttgggaaactgagtctactccctagaaaagggtaaatgtcagcgggtgcggtggctcacgcctgtaatcccagcactttgggaggctgaggtgggtggatcaggaggtcaggagattgagaccatcctggctaacatggtgaaactccatctctactgaaatacaaaaaattagccgggcgtggtggtgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacccaggaggcggaggttgcagtgagctgagattgcaccagtgcattccagcctgggtgacagagcgagactccgtctcaaaaaaaagagaagtcttagctaaatcaatgact >DA952838:1-562 (+) ttaaaattgtttataaggttttaaaaattacttttaatattagtaatacactatacaaaggtgaaatttggttttctcttttgaacaaaattttcatatgagagctaatgaaatatttttatttaccttttgaataactacagggtgcaaaaaaaggaggaaaaagacatttaggtggcctcatgcntgtctttattaggtttcattgtttgggaaactgagtctactccctagaaaagggtaaatgtcagcgggtgcggtggctcgcgcctgtagtcccagcactttgggaggctgaggtgggtggatcaggaggtcaggagattgagaccatcctggctagcatggtgaaactccgtctctgctgaaatgcaaaaggttggccgggcgtggtggtgggcgcctgtggtcccagctgctcgggaggctggggcaggagagtggcatgaacccaggaggcggaggttgcagtgagctgagattgcaccagtgcattccagcctgggtgacagagcgagactccgtctcaaaaaaaagagaagtcttagctaaatcaatgact End editing Edited EST: DB171710, type: ag Aligns to: chr2:136455289-136455563 (++) All mismatches: ag (81), ag (94), ag (102), ag (103), ag (107), ag (111), ag (122), ag (149), ag (152), ag (154), ag (177), ag (181), ag (184), ag (185), ag (188), ag (192), ag (196), ag (206), ag (212), ag (215), ag (250), ag (254), Editing mismatches: 22, all mismatches: 22, alignment length: 275, cluster length: 174, total number of As: 59 Locations in RNA: 81 94 102 103 107 111 122 149 152 154 177 181 184 185 188 192 196 206 212 215 250 254 Locations in genome: 136455369 136455382 136455390 136455391 136455395 136455399 136455410 136455437 136455440 136455442 136455465 136455469 136455472 136455473 136455476 136455480 136455484 136455494 136455500 136455503 136455538 136455542 Upstream nucleotide (in genome): a t c a c c a c t t a a a a t c c c t a c t Upstream nucleotide summary: a: 8, c: 8, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): t g a g g g g a t g a a a t a g t t t t c a Downstream nucleotide summary: a: 7, c: 1, g: 7, t: 7, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 2, at: 3, ca: 2, cc: 1, cg: 3, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 2, tt: 2, other: 0 >chr2:136455289-136455563 (+) gatacatatatatgtggtaaaattatacaagaaataaaaagcaagtaagtactggttggacaaagtgggtcacgcctgtaatcccagcactttaggaggccaaggcaggcagatcagttgaagccaggagtttgagaccagcctgaccaatatagtgaaaccccatctctaccaaaaacaaaaaattaaccaggcatggtggtgcatgcctataatcccagctactcaggaggctgacgcataagaatcacttaaacctgggaggcggaggttgt >DB171710:1-275 (+) gatacatatatatgtggtaaaattatacaagaaataaaaagcaagtaagtactggttggacaaagtgggtcacgcctgtagtcccagcactttgggaggccggggcgggcggatcagttgaggccaggagtttgagaccagcctgaccgatgtggtgaaaccccatctctaccaaagacagaaggttgaccgggcgtggtggtgcgtgcctgtagtcccagctactcaggaggctgacgcataagaatcgcttgaacctgggaggcggaggttgt End editing Edited EST: DW409444, type: ag Aligns to: chr2:32506647-32506968 (++) All mismatches: ag (68), ag (88), ag (102), ag (111), ag (141), ag (148), ag (149), ag (151), ag (156), ag (171), ag (178), ag (181), ag (223), ag (240), ag (246), ag (255), ag (259), ag (262), ag (266), ag (275), ag (279), ag (283), ag (284), ag (289), ag (297), Editing mismatches: 25, all mismatches: 25, alignment length: 322, cluster length: 230, total number of As: 69 Locations in RNA: 68 88 102 111 141 148 149 151 156 171 178 181 223 240 246 255 259 262 266 275 279 283 284 289 297 Locations in genome: 32506698 32506718 32506732 32506741 32506771 32506778 32506779 32506781 32506786 32506801 32506808 32506811 32506853 32506870 32506876 32506885 32506889 32506892 32506896 32506905 32506909 32506913 32506914 32506919 32506927 Upstream nucleotide (in genome): c t c t a c a a c t a t t c a a c a c c g c a c c Upstream nucleotide summary: a: 8, c: 11, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): c g g a c a a c t c t g c g t c g g g g g a g t c Downstream nucleotide summary: a: 4, c: 7, g: 10, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 2, at: 2, ca: 2, cc: 2, cg: 5, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr2:32506647-32506968 (+) tattcctgtattctataaagaaactgaggtgagctgggtgtggtggcttacacctgtaatcccagcactttaggctgaggtgggcagttggcttaagctcgagagtttgataccagcctgggcaacatggcaaaaccccatctctacaaaacatacaaaaaattagccgggcatggtggcacgcacctgcaatcccaatcccagctacctaggaggctgaggcaggagaatcacttgaacccagaaggcagaggttgcagtgagccaagatcatgccatcacacttcagcctgggtgacagggtgagactctgtctcaaaaa >DW409444:17-338 (+) tattcctgtattctataaagaaactgaggtgagctgggtgtggtggcttacgcctgtaatcccagcactttgggctgaggtgggcggttggcttgagctcgagagtttgataccagcctgggcagcatggcggagccccgtctctacaaaacatgcaaaaagttggccgggcatggtggcacgcacctgcaatcccaatcccagctgcctaggaggctgaggcgggagagtcacttgagcccggagggcggaggttgcggtgggccgggatcgtgccatcgcacttcagcctgggtgacagggtgagactctgtctcaaaaa End editing Edited EST: DW410655, type: ag Aligns to: chr2:226452098-226452419 (++) All mismatches: ag (14), ag (16), ag (81), ag (123), ag (126), ag (127), ag (134), ag (141), ag (154), ag (155), ag (163), ag (164), ag (169), ag (182), ag (185), ag (193), ag (194), ag (208), ag (226), ag (289), ag (291), ag (302), ag (303), ta (316), Editing mismatches: 23, all mismatches: 24, alignment length: 321, cluster length: 291, total number of As: 94 Locations in RNA: 14 16 81 123 126 127 134 141 154 155 163 164 169 182 185 193 194 208 226 289 291 302 303 Locations in genome: 226452099 226452102 226452167 226452209 226452212 226452213 226452220 226452227 226452240 226452241 226452249 226452250 226452255 226452268 226452271 226452279 226452280 226452294 226452312 226452375 226452377 226452388 226452389 Upstream nucleotide (in genome): c c a c a a t t t a t a g c a g a t c c a t a Upstream nucleotide summary: a: 9, c: 6, g: 2, t: 6, other: 0 Downstream nucleotide (in genome): g a g g a g g c a g a c c g c a t t g a t a c Downstream nucleotide summary: a: 7, c: 5, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 3, at: 2, ca: 2, cc: 0, cg: 4, ct: 0, ga: 1, gc: 1, gg: 0, gt: 0, ta: 3, tc: 1, tg: 1, tt: 1, other: 0 >chr2:226452098-226452419 (+) cagcaaaggaagagactaaggaataaactaaggcactaagatacaaaagacatgcacgcccggggcagaagggcatgtgaacagatttgggcaccaagaagagaggcgcacagaaagggattagtctttactggagatgtttaagaatgctaacaggacttgatcctgccagaacttttggaatcttcctcatggtatcctctgaggtgtcttcaggtctttgggtgtagctcaactcctaaatacctttgaagaattccacagtgcaagagcttccaaatctagcccctaactctcatcaggttgctcctttcagaaagag >DW410655:13-333 (+) cgg-gaaggaagagactaaggaataaactaaggcactaagatacaaaagacatgcacgcccggggcagaggggcatgtgaacagatttgggcaccaagaagagaggcgcacggagggggattggtctttgctggagatgtttgggaatgctggcagggcttgatcctgccggagcttttggggtcttcctcatggtgtcctctgaggtgtcttcgggtctttgggtgtagctcaactcctaaatacctttgaagaattccacagtgcaagagcttccgagtctagcccctggctctcatcaggtagctcctttcagaaagag End editing Edited EST: DW412543, type: ag Aligns to: chr2:65457805-65458112 (++) All mismatches: ag (18), ag (19), ag (25), ag (31), ag (63), ag (68), ag (73), ag (144), ag (145), ag (150), at (153), ag (171), ag (224), ag (235), ag (241), ag (242), tc (260), ag (278), ag (279), ag (280), ag (285), ag (289), ag (296), ag (306), ag (309), ag (312), ag (315), ag (321), Editing mismatches: 26, all mismatches: 28, alignment length: 308, cluster length: 304, total number of As: 77 Locations in RNA: 18 19 25 31 63 68 73 144 145 150 171 224 235 241 242 278 279 280 285 289 296 306 309 312 315 321 Locations in genome: 65457806 65457807 65457813 65457819 65457851 65457856 65457861 65457932 65457933 65457938 65457959 65458012 65458023 65458029 65458030 65458066 65458067 65458068 65458073 65458077 65458084 65458094 65458097 65458100 65458103 65458109 Upstream nucleotide (in genome): a a t t a a t t a c t a t a a g a a c t g c g a t t Upstream nucleotide summary: a: 11, c: 3, g: 3, t: 9, other: 0 Downstream nucleotide (in genome): a g g c g t t a t g g c c a t a a t g c g g g t c c Downstream nucleotide summary: a: 5, c: 6, g: 9, t: 6, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 2, at: 5, ca: 0, cc: 0, cg: 3, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 1, tc: 5, tg: 2, tt: 1, other: 0 >chr2:65457805-65458112 (+) aaagtgctaggattacaggcttgagccactgcaccctgctgtcagaagctaatgttatgttactattccattagttagctaacattagaaggctgattttaggctgggcgttgtggctcatgcctgtaatcccagcactttgggaggccgaggtaggaggttcacttgaggtcaggagtttgagaccagcatggccatcatggtgaaaccccgtgtctactaaaaatacaaaaattagccgggtgtggtttctgatgcctgaaatcccagctacttgggaggctgaggcaggagaattacttgtacct >DW412543:17-324 (+) agggtgctgggattgcaggcttgagccactgcaccctgctgtcagaggctagtgttgtgttactattccattagttagctaacattagaaggctgattttaggctgggcgttgtggctcatgcctgtggtcccggctctttgggaggccgaggtgggaggttcacttgaggtcaggagtttgagaccagcatggccatcatggtgaagccccgtgtctgctaaaggtacaaaaattagccgggcgtggtttctgatgcctggggtcccggctgcttggggggctgaggcgggggagttgcttgtgcct End editing Edited EST: DW413018, type: ag Aligns to: chr2:155112218-155112523 (++) All mismatches: ag (86), ag (102), ag (109), ag (114), ag (130), ag (131), ag (139), ag (149), ag (178), ag (182), ag (185), ag (202), ag (208), ag (212), ag (213), ag (218), ag (244), ag (250), ga (291), ag (322), Editing mismatches: 19, all mismatches: 20, alignment length: 306, cluster length: 237, total number of As: 67 Locations in RNA: 86 102 109 114 130 131 139 149 178 182 185 202 208 212 213 218 244 250 322 Locations in genome: 155112287 155112303 155112310 155112315 155112331 155112332 155112340 155112350 155112379 155112383 155112386 155112403 155112409 155112413 155112414 155112419 155112445 155112451 155112523 Upstream nucleotide (in genome): c c a c c a c g a t c a t a a t t c c Upstream nucleotide summary: a: 6, c: 8, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g c t g a g g g c g a a c a a g g g n Downstream nucleotide summary: a: 5, c: 3, g: 9, t: 1, other: 1 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 1, ca: 2, cc: 1, cg: 4, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 1 >chr2:155112218-155112523 (+) agatttcatgcatttccttgatccccagatggttgagaagagtccaaaacttttggaaagactcaggccaggtgtggtgactaacacctgtaatcccagcacgttgagaggccaaggtgggcaggtcatttgagcccaggagttcaagatcagcctgagcaacatagcaaaactctgtctctacaaaaaatacaaaaagatagctcggtatggtggtgcatgcccgtagtcccagctattctggaggctgaggtgggagaatcatctgagcctgggaagtcgaggctgcagggaaatctgattgca >DW413018:17-322 (+) agatttcatgcatttccttgatccccagatggttgagaagagtccaaaacttttggaaagactcaggccgggtgtggtgactaacgcctgtagtcccggcacgttgagaggccggggtgggcgggtcatttgggcccaggagttcaagatcagcctgagcagcatggcgaaactctgtctctacagaaaatgcaaggagatggctcggtatggtggtgcatgcccgtggtcccggctattctggaggctgaggtgggagaatcatctgagcctgagaagtcgaggctgcagggaaatctgattgcg End editing Edited EST: DW416549, type: ag Aligns to: chr2:154347173-154347465 (++) All mismatches: ag (40), ag (70), ag (107), ag (115), ag (116), ag (141), ag (158), ag (159), ag (161), ag (170), ag (174), ag (183), ag (197), ag (202), ag (206), ag (211), ag (226), ag (232), ag (238), ag (242), ag (258), ag (259), ag (300), Editing mismatches: 23, all mismatches: 23, alignment length: 293, cluster length: 261, total number of As: 73 Locations in RNA: 40 70 107 115 116 141 158 159 161 170 174 183 197 202 206 211 226 232 238 242 258 259 300 Locations in genome: 154347196 154347226 154347263 154347271 154347272 154347297 154347314 154347315 154347317 154347326 154347330 154347339 154347353 154347358 154347362 154347367 154347382 154347388 154347394 154347398 154347414 154347415 154347456 Upstream nucleotide (in genome): g c c c a a a a t t c t a c t g g c a c c a a Upstream nucleotide summary: a: 8, c: 8, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): g c g a g c a t c g g g t g c g g c c g a t a Downstream nucleotide summary: a: 4, c: 6, g: 10, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 1, at: 3, ca: 2, cc: 2, cg: 4, ct: 0, ga: 0, gc: 0, gg: 3, gt: 0, ta: 0, tc: 2, tg: 2, tt: 0, other: 0 >chr2:154347173-154347465 (+) atgagtaaatacaaaattggctgagcgcagtggctcacacctgtaatcccagcactctgggaggcccaggcagtcagatcacctgaggtcagaagttcaagaccaggctggccaatatggtgaaaccccatctctattaaaaatacaaaaattagccaggtgtggtagtgggtgcctgtaatcccagctacttgagaggctgaggcaggagaatcacttgaactcaggacccagaggttgcaatgagccgagattgtgccactgcactccagcctgggtgacaaagccagact >DW416549:17-309 (+) atgagtaaatacaaaattggctgggcgcagtggctcacacctgtaatcccagcgctctgggaggcccaggcagtcagatcacctgaggtcggaagttcgggaccaggctggccaatatggtgaagccccatctctattaaaggtgcaaaaattggccgggtgtggtggtgggtgcctgtagtcccggctgcttgggaggctgaggcaggggaatcgcttgagctcgggacccagaggttgcggtgagccgagattgtgccactgcactccagcctgggtgacagagccagact End editing Edited EST: DW423590, type: ag Aligns to: chr2:65455981-65456262 (++) All mismatches: gc (13), ag (16), ag (26), ag (34), ag (50), ag (80), ag (95), ag (121), ag (122), ag (127), ag (131), ag (148), ag (153), ag (162), ag (163), ag (167), ag (171), ag (183), ag (202), ag (212), tg (263), Editing mismatches: 19, all mismatches: 21, alignment length: 282, cluster length: 197, total number of As: 52 Locations in RNA: 16 26 34 50 80 95 121 122 127 131 148 153 162 163 167 171 183 202 212 Locations in genome: 65455988 65455998 65456006 65456022 65456052 65456067 65456093 65456094 65456099 65456103 65456120 65456125 65456134 65456135 65456139 65456143 65456155 65456174 65456184 Upstream nucleotide (in genome): c g g c t t t a c t c g g a c a c c c Upstream nucleotide summary: a: 3, c: 8, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): g g g g a g a t g c g a a g g g g c g Downstream nucleotide summary: a: 4, c: 2, g: 12, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 1, ca: 0, cc: 1, cg: 7, ct: 0, ga: 2, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr2:65455981-65456262 (+) ggcgggcagatcaccagaggttaggagttcgagaccagcccagccaacgtggtgaaaccccggtctctactaaaaatacaaaaattagccggccgtggtggtgcttgcctgtaatcccagctacttgggaggctgaggcaggagaatcccttgaagccaggaagcggaggttgcagtgagccgagattgcgccactgcactccagcctgggcgacaagagtgaaactccgtctcaattataa-aaaaaaaaaattgtttcattcagacctccctcttgccaga >DW423590:10-291 (+) ggccgg-ggatcaccaggggttaggggttcgagaccagcccggccaacgtggtgaaaccccggtctctactgaaaatacaaaaattggccggccgtggtggtgcttgcctgtggtcccggctgcttgggaggctgaggcgggaggatcccttggggccgggaggcggaggttgcggtgagccgagattgcgccgctgcactccggcctgggcgacaagagtgaaactccgtctcaattataacaaaaaaaaaatggtttcattcagacctccctcttgccaga End editing Edited EST: DW425647, type: ag Aligns to: chr2:238592718-238592989 (++) All mismatches: ag (15), ag (16), ag (132), ag (133), ag (148), ag (154), ag (155), ag (185), ag (200), ag (208), ag (223), ag (224), ag (234), ag (239), ag (254), ac (262), Editing mismatches: 15, all mismatches: 16, alignment length: 271, cluster length: 241, total number of As: 73 Locations in RNA: 15 16 132 133 148 154 155 185 200 208 223 224 234 239 254 Locations in genome: 238592719 238592720 238592837 238592838 238592853 238592859 238592860 238592890 238592905 238592913 238592928 238592929 238592939 238592944 238592959 Upstream nucleotide (in genome): g a c a c t a t c c c a a c t Upstream nucleotide summary: a: 5, c: 6, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): a t a g c a t g g a a c c t c Downstream nucleotide summary: a: 5, c: 4, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 2, ca: 3, cc: 1, cg: 1, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr2:238592718-238592989 (+) gaatgttaaactcataggcaggattactgaggcaaagccacataaatgagggaatctctggaaaaaatacattgcttttattttgtactaaaattgccattttttttttttttttggccaagtatagtggctcacacctgtaatcccagcactttgggaggccgaggcgggtagatctctcgaggccaggaattcaagaccagcctggccaacatggtgaaaccccatctctattaaaaatacaaaaaaaaagtagttgggtgtggtggcac >DW425647:14-284 (+) gggtgttaaactcataggcaggattactgaggcaaagccacataaatgagggaatctctggaaaaaatacattgcttttattttgtactaaaattgccattttttttttttttt-ggccgggtatagtggctcacgcctgtggtcccagcactttgggaggccgaggcgggtggatctctcgaggccgggaattcgagaccagcctggccggcatggtgaagccccgtctctattaaaaatgcaaaaaacaagtagttgggtgtggtggcac End editing Edited EST: DW429775, type: ag Aligns to: chr2:243044432-243044810 (++) All mismatches: ag (26), ag (34), ag (35), ag (40), ag (41), ag (56), ag (57), ag (65), ag (70), ag (75), ag (80), ag (89), ag (103), ag (104), ag (106), ag (114), ag (156), ag (172), ag (182), ag (183), ag (192), ag (196), ag (200), ag (215), ag (218), ag (248), ag (251), ag (282), tc (374), Editing mismatches: 28, all mismatches: 29, alignment length: 381, cluster length: 255, total number of As: 78 Locations in RNA: 26 34 35 40 41 56 57 65 70 75 80 89 103 104 106 114 156 172 182 183 192 196 200 215 218 248 251 282 Locations in genome: 243044442 243044450 243044451 243044456 243044457 243044472 243044473 243044481 243044486 243044491 243044496 243044505 243044519 243044520 243044522 243044530 243044570 243044586 243044596 243044597 243044606 243044610 243044614 243044629 243044632 243044662 243044665 243044696 Upstream nucleotide (in genome): c t a c a c a c c g c a c a c a t c t a t c a a c g c c Upstream nucleotide summary: a: 9, c: 13, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): g a t a c a g g c g g g a c t a g g a t c g g t c g g a Downstream nucleotide summary: a: 7, c: 5, g: 12, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 3, at: 3, ca: 4, cc: 2, cg: 6, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr2:243044432-243044810 (+) gtggtggctcaggcctgtaatcccaacactttgggaggccaaggcgggcagatcacctgaggtcaggagttcaagaccagcccggccaacatggtgaaaacctgtctctactaaaaatac--aaaaaaaaaaaaaaaattagccgggcatggtgacaggtgcctgtaatcccagctactcaggaagctgagtcaggagaatcacttgaacctgggaggtggaggttgcggtgagcagagatcctgtcattgcactctagcctgggcaacaagagcaaaactccatctgaaaaagaaaaaagaacaagatttactataaaatgtaaaatcaccacaatcaagagagtggtatgtggtattggtgaaaagatagatacacagg >DW429775:16-396 (+) gtggtggctcgggcctgtggtcccggcactttgggaggccggggcgggcggatcgcctggggtcgggagttcaggaccagcccggccggcgtggtgaagacctgtctctactaaaaatacaaaaaaaaaaaaaaaaaattggccgggcatggtgacgggtgcctgtggtcccagctgctcgggaggctgagtcaggagagtcgcttgaacctgggaggtggaggttgcggtgggcggagatcctgtcattgcactctagcctgggcgacaagagcaaaactccatctgaaaaagaaaaaagaacaagatttactataaaatgtaaaatcaccacaatcaagagagtggtatgtggtatcggtgaaaagatagatacacagg End editing Edited EST: DW431653, type: ag Aligns to: chr2:178307328-178307579 (++) All mismatches: ag (11), tg (14), ag (66), ag (71), ag (74), ag (76), ag (79), ag (80), ag (81), ag (111), ag (137), ag (138), ag (167), ag (183), ag (199), ag (203), ag (207), ag (208), ag (210), ag (215), ag (240), ga (261), Editing mismatches: 20, all mismatches: 22, alignment length: 253, cluster length: 230, total number of As: 63 Locations in RNA: 11 66 71 74 76 79 80 81 111 137 138 167 183 199 203 207 208 210 215 240 Locations in genome: 178307328 178307383 178307388 178307391 178307393 178307396 178307397 178307398 178307428 178307454 178307455 178307484 178307500 178307516 178307520 178307524 178307525 178307527 178307532 178307557 Upstream nucleotide (in genome): n c c c t c a a t t a a c c g c a g c c Upstream nucleotide summary: a: 5, c: 9, g: 2, t: 3, other: 1 Downstream nucleotide (in genome): c g a t g a a a a a t g g g g a g t c a Downstream nucleotide summary: a: 8, c: 2, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 2, at: 1, ca: 4, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 1, gt: 1, ta: 2, tc: 0, tg: 1, tt: 0, other: 1 >chr2:178307328-178307579 (+) acctggggaggctgaggtgggtggatcacttgaggtcgggagttcgagaccagccaggccaacatagcaaaacctcatctctactaaaaatacaaaaattaaccgagtgtggtggtgtgtgcctgtaatcccagctacttgggaggctgagacataagactcgcttgaacccaggaggtggaggttgcagtgagccaagatcacaccactgcactccagcctgggtgacaaaaaaaaaaaaaaa-aaaaagaa >DW431653:11-263 (+) gccgggggaggctgaggtgggtggatcacttgaggtcgggagttcgagaccagccgggccgacgtggcgggacctcatctctactaaaaatacaaaaattgaccgagtgtggtggtgtgtgcctgtggtcccagctacttgggaggctgagacataggactcgcttgaacccgggaggtggaggttgcggtgggccggggtcacgccactgcactccagcctgggtgacgaaaaaaaaaaaaaacaaaaaaaa End editing Edited EST: DW433685, type: ag Aligns to: chr2:203173632-203173874 (++) All mismatches: ag (23), ag (32), ag (55), ag (57), ag (68), ag (72), ag (74), ag (77), ag (113), ag (118), ag (122), ag (145), ag (162), ag (166), ag (167), ag (174), ag (183), ag (188), ag (190), ag (237), Editing mismatches: 20, all mismatches: 20, alignment length: 245, cluster length: 215, total number of As: 67 Locations in RNA: 23 32 55 57 68 72 74 77 113 118 122 145 162 166 167 174 183 188 190 237 Locations in genome: 203173638 203173647 203173670 203173672 203173683 203173687 203173689 203173692 203173728 203173733 203173737 203173760 203173777 203173781 203173782 203173789 203173798 203173803 203173805 203173852 Upstream nucleotide (in genome): c a a a t a a t a c t a a g a c g c c a Upstream nucleotide summary: a: 10, c: 5, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g g a c c a a c t g c t g a g g g c c a Downstream nucleotide summary: a: 5, c: 6, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 3, at: 2, ca: 0, cc: 2, cg: 3, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 3, tg: 0, tt: 0, other: 0 >chr2:203173632-203173874 (+) ggggtcaggagttcaagaccagcctggccaacatggcaaaaccctgtctctactaaaaatacaaaaattagccgggcattgtggcacacgcctataatcccagctacttgggaggctgaggcaggagaattgcttgaacccgggaagcgaaggttgcagtgagccgagatcacaccactgcactccagcctgggcacagtgagactcccatctcaaaaaaaaaaaaaaaaaa--tgcgggagagg >DW433685:17-261 (+) ggggtcgggagttcaggaccagcctggccaacatggcagagccctgtctctgctagagatgcaaaaattagccgggcattgtggcacacgcctatagtcccggctgcttgggaggctgaggcaggagagttgcttgaacccgggaggcgggggttgcggtgagccgggatcgcgccactgcactccagcctgggcacagtgagactcccatctcaaaaaagaaaaaaaaaaaaatgcgggagagg End editing Edited EST: DW462549, type: ag Aligns to: chr2:136521313-136521665 (++) All mismatches: ag (59), ag (142), ag (196), ag (197), ag (202), ag (212), ag (222), ag (233), ag (236), ag (276), ag (282), ag (286), ag (290), ag (293), ag (303), ag (307), ag (308), ag (317), ag (318), ag (329), ag (331), ag (346), ag (347), ag (352), ag (357), ag (360), Editing mismatches: 26, all mismatches: 26, alignment length: 353, cluster length: 302, total number of As: 88 Locations in RNA: 59 142 196 197 202 212 222 233 236 276 282 286 290 293 303 307 308 317 318 329 331 346 347 352 357 360 Locations in genome: 136521356 136521439 136521493 136521494 136521499 136521509 136521519 136521530 136521533 136521573 136521579 136521583 136521587 136521590 136521600 136521604 136521605 136521614 136521615 136521626 136521628 136521643 136521644 136521649 136521654 136521657 Upstream nucleotide (in genome): c t c a c a a t t t c t c g c a a g a c g c a c c t Upstream nucleotide summary: a: 7, c: 10, g: 3, t: 6, other: 0 Downstream nucleotide (in genome): c g a g g c c c g g g c g g g a a a c g g a g t c c Downstream nucleotide summary: a: 5, c: 8, g: 12, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 2, at: 0, ca: 2, cc: 2, cg: 5, ct: 1, ga: 1, gc: 0, gg: 2, gt: 0, ta: 0, tc: 3, tg: 3, tt: 0, other: 0 >chr2:136521313-136521665 (+) ctgagcccaggaggtcaaggctgcagtgagccatgatcacaccactgtactccagcctgagtgacagagcaagactctgtctcaaaaagtaaataaataagaccaggcatggtggatcacgcctgtagtcccagcactttgagaggctgagatgggtggatcatttgaggccgggagttcaagaccagcctggccaacgtggcgaaaccctgtctctactagaaaaatacaaaaattagctgggcatggcacgcatctgtagtcccagctactcaggaggttgaggcaggaaaattgcttgaacccgggatgcagaggttgcagtgagccaaggtcatgccactacactccag >DW462549:16-368 (+) ctgagcccaggaggtcaaggctgcagtgagccatgatcacaccgctgtactccagcctgagtgacagagcaagactctgtctcaaaaagtaaataaataagaccaggcatggtggatcacgcctgtggtcccagcactttgagaggctgagatgggtggatcatttgaggccgggagttcgggaccggcctggccagcgtggcgaagccctgtctctgctggaaaaatacaaaaattagctgggcatggcacgcatctgtggtcccggctgctcggggggttgaggcgggaggattgcttgggcccgggatgcgggggttgcagtgagccggggtcgtgccgctgcactccag End editing Edited EST: DW463261, type: ag Aligns to: chr2:159928409-159928754 (++) All mismatches: ag (119), ag (124), ag (125), ag (166), ag (181), ag (182), ag (195), ag (202), ag (206), ag (219), ag (227), ag (228), ag (241), ag (247), ag (276), ta (278), ta (281), ag (282), ag (285), ag (324), ag (349), ag (354), Editing mismatches: 20, all mismatches: 22, alignment length: 346, cluster length: 236, total number of As: 46 Locations in RNA: 119 124 125 166 181 182 195 202 206 219 227 228 241 247 276 282 285 324 349 354 Locations in genome: 159928511 159928516 159928517 159928558 159928573 159928574 159928587 159928594 159928598 159928611 159928619 159928620 159928633 159928639 159928668 159928674 159928677 159928716 159928741 159928746 Upstream nucleotide (in genome): g g a c c a t a g a c a t c t t t a c c Upstream nucleotide summary: a: 6, c: 6, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): g a g t a c g g t g a g c t t g g a c g Downstream nucleotide summary: a: 4, c: 3, g: 9, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 4, at: 0, ca: 2, cc: 1, cg: 1, ct: 2, ga: 1, gc: 0, gg: 1, gt: 1, ta: 0, tc: 1, tg: 3, tt: 1, other: 0 >chr2:159928409-159928754 (+) tttctttactggggcatttaaacaaattctgcaaaatgttagaacatgatttaaacatagaatgggacttctgtgtttttttgttttgttttttgttttttgagatgaagtctcggctctgttgcctgggctggagtgcagtgggtgccatcttggatcattgcaacctcagcctcctaggttcaagcgattttcctgcccaagcctcccaagtacctgggattacaggcatgtgccaccacacccagctaattttcgtatttttagtagaggtggggttttgccatgttggccgggctggtctcaaaatcctaacctcaggtgatctgcccacctcagcctcaca >DW463261:17-362 (+) tttctttactggggcatttaaacaaattctgcaaaatgttagaacatgatttaaacatagaatgggacttctgtgtttttttgttttgttttttgttttttgggatggggtctcggctctgttgcctgggctggagtgcagtgggtgccgtcttggatcattgcggcctcagcctcctgggttcaggcggttttcctgcccaggcctcccgggtacctgggattgcaggcgtgtgccaccacacccagctaattttcgtgtattaggtggaggtggggttttgccatgttggccgggctggtctcaagatcctaacctcaggtgatctgcccgcctcggcctcaca End editing Edited EST: DW466810, type: ag Aligns to: chr2:30852021-30852354 (++) All mismatches: ag (166), ag (167), ag (175), ag (193), ag (202), ag (226), ag (236), ag (260), ac (263), ag (266), ag (269), ag (270), ag (271), ag (275), ag (295), ag (301), ag (302), ag (311), ag (324), ag (328), ag (343), Editing mismatches: 20, all mismatches: 21, alignment length: 334, cluster length: 178, total number of As: 46 Locations in RNA: 166 167 175 193 202 226 236 260 266 269 270 271 275 295 301 302 311 324 328 343 Locations in genome: 30852170 30852171 30852179 30852197 30852206 30852230 30852240 30852264 30852270 30852273 30852274 30852275 30852279 30852299 30852305 30852306 30852315 30852328 30852332 30852347 Upstream nucleotide (in genome): t a c c c c a t t a a a t c t a c g c a Upstream nucleotide summary: a: 7, c: 7, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): a t c g c g c a c a a a g c a t c g g c Downstream nucleotide summary: a: 6, c: 7, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 0, at: 2, ca: 0, cc: 4, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 3, tc: 1, tg: 1, tt: 0, other: 0 >chr2:30852021-30852354 (+) atatatggtagagggtaaagaactcttgcaaagtcataagaagatgacaaataaattatattaccacagtgtttttccaataaacttattttttctcatcaaagacataaaaatacaaaatgaggctgagcatggtggctcacccctgtaatctcagcactttgggaggctgaggcaggtggatcacctgaggtccggagttcgagaccagcctggccaacgtggcgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggtgggcacctgtaatcccagccacttgggaggctgaggcaggagaatcgcttgaacccggga >DW466810:17-350 (+) atatatggtagagggtaaagaactcttgcaaagtcataagaagatgacaaataaattatattaccacagtgtttttccaataaacttattttttctcatcaaagacataaaaatacaaaatgaggctgagcatggtggctcacccctgtggtctcagcgctttgggaggctgaggcgggtggatcgcctgaggtccggagttcgagaccggcctggccagcgtggcgaaaccctgtctctactgaacatgcagggattggccgggcatggtggtgggcgcctgtggtcccagccgcttgggaggctggggcgggagaatcgcttgagcccggga End editing Edited EST: DW466996, type: ag Aligns to: chr2:26365467-26365799 (++) All mismatches: ga (118), ag (154), ag (155), ag (195), ag (200), ag (201), ag (245), ag (247), ag (248), ag (250), ag (264), ag (284), ag (331), Editing mismatches: 12, all mismatches: 13, alignment length: 333, cluster length: 178, total number of As: 48 Locations in RNA: 154 155 195 200 201 245 247 248 250 264 284 331 Locations in genome: 26365604 26365605 26365645 26365650 26365651 26365695 26365697 26365698 26365700 26365714 26365734 26365781 Upstream nucleotide (in genome): t a g c a t c a a t c g Upstream nucleotide summary: a: 4, c: 3, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): a t g a t c a a a g t g Downstream nucleotide summary: a: 5, c: 1, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 2, ca: 2, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr2:26365467-26365799 (+) ctaggatagcaaaatcttttcacatggatattggttgcaagggggtttgccttataacaatttattaatctacccatttgttttattaagttttaaaatttgtattataagggctgggcgtggtggctcatgcctgtaatctcagcactttgggaggctgaggtgggtggattgcctgagctcaatagttctagaccagcctgggcaacatgacgaaaatctgtctctacaaaaaataacaaaaattagccaggcatggtggtgtgcatctgtggtctcagctgcctgggagactgaggtgggaggatcagttgagtcctggaggttgaggct >DW466996:17-349 (+) ctaggatagcaaaatcttttcacatggatattggttgcaagggggtttgccttataacaatttattaatctacccatttgttttattaagttttaaaatttatattataagggctgggcgtggtggctcatgcctgtggtctcagcactttgggaggctgaggtgggtggattgcctgggctcggtagttctagaccagcctgggcaacatgacgaaaatctgtctctgcggagaataacaaaaattggccaggcatggtggtgtgcgtctgtggtctcagctgcctgggagactgaggtgggaggatcagttgggtcctggaggttgaggct End editing Edited EST: DB566044, type: ag Aligns to: chr2:217366721-217367186 (++) All mismatches: ag (2), ag (9), ag (73), ag (74), ag (80), ag (83), ag (146), ag (148), ag (154), ag (174), ag (177), ag (178), ag (180), ag (191), ag (199), ag (201), ag (209), ag (210), ag (215), ag (219), ag (236), ag (238), ag (239), ag (245), ga (275), Editing mismatches: 24, all mismatches: 25, alignment length: 466, cluster length: 244, total number of As: 68 Locations in RNA: 2 9 73 74 80 83 146 148 154 174 177 178 180 191 199 201 209 210 215 219 236 238 239 245 Locations in genome: 217366722 217366729 217366793 217366794 217366800 217366803 217366866 217366868 217366874 217366894 217366897 217366898 217366900 217366911 217366919 217366921 217366929 217366930 217366935 217366939 217366956 217366958 217366959 217366965 Upstream nucleotide (in genome): g c g a c c c t a t a a a t c c t a c t c c a c Upstream nucleotide summary: a: 7, c: 10, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): g c a a g c t g a c a a a t c t a t g c c a g c Downstream nucleotide summary: a: 8, c: 7, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 5, ac: 0, ag: 1, at: 1, ca: 1, cc: 5, cg: 2, ct: 2, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 1, tt: 1, other: 0 >chr2:217366721-217367186 (+) gagccaccacgcccagccttgcatttaatatttttataatgtgtctaggctgggtgcggtgactcacgcctgaaatcccagcactttgggtggctgaggcaggtggattacttgaggccaggagattgagaccagtgtggccaacatagcaaaaacccgtctcgacgaaaaatacaaaaaatagcttggtatggtggcacatgcctgtaatcccagctactttggaggctcaggcacaagaatcacttgaacctacgaggcggaggttgcagtgggccaggatcgtgccactgcactttatttagccaggacaacactctgtctccaaaaaaaagtttctgaaggtaaaagatatactaaaggatatacatatactgcctcttctatgatgtttcatttgacctacaccatcagcatcttcaggaaacagtatgaaactaatttcacattaaatgttgcaaacgtc >DB566044:1-466 (+) gggccaccgcgcccagccttgcatttaatatttttataatgtgtctaggctgggtgcggtgactcacgcctgggatcccggcgctttgggtggctgaggcaggtggattacttgaggccaggagattgagaccagtgtggccaacgtggcaaagacccgtctcgacgaaaaatgcaggagatagcttggtgtggtggcgcgtgcctgtggtcccggctgctttggaggctcaggcgcgggaatcgcttgaacctacgaggcggaggttgcagtgagccaggatcgtgccactgcactttatttagccaggacaacactctgtctccaaaaaaaagtttctgaaggtaaaagatatactaaaggatatacatatactgcctcttctatgatgtttcatttgacctacaccatcagcatcttcaggaaacagtatgaaactaatttcacattaaatgttgcaaacgtc End editing Edited EST: BM689436, type: ag Aligns to: chr2:217366778-217367095 (++) All mismatches: ag (24), ag (25), ag (30), ag (51), ag (96), ag (98), ag (101), ag (126), ag (127), ag (128), ag (133), ag (149), ag (151), ag (159), ag (160), ag (165), ag (189), ag (195), ag (201), Editing mismatches: 19, all mismatches: 19, alignment length: 318, cluster length: 178, total number of As: 55 Locations in RNA: 24 25 30 51 96 98 101 126 127 128 133 149 151 159 160 165 189 195 201 Locations in genome: 217366794 217366795 217366800 217366821 217366866 217366868 217366871 217366896 217366897 217366898 217366903 217366919 217366921 217366929 217366930 217366935 217366959 217366965 217366971 Upstream nucleotide (in genome): a a c c c t c c a a t c c t a c a c a Upstream nucleotide summary: a: 7, c: 9, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): a t g g t g a a a a g c t a t g g c c Downstream nucleotide summary: a: 6, c: 3, g: 6, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 2, ca: 2, cc: 2, cg: 3, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 0 >chr2:217366778-217367095 (+) ggtgactcacgcctgaaatcccagcactttgggtggctgaggcaggtggattacttgaggccaggagattgagaccagtgtggccaacatagcaaaaacccgtctcgacgaaaaatacaaaaaatagcttggtatggtggcacatgcctgtaatcccagctactttggaggctcaggcacaagaatcacttgaacctacgaggcggaggttgcagtgggccaggatcgtgccactgcactttatttagccaggacaacactctgtctccaaaaaaaagtttctgaaggtaaaagatatactaaaggatatacatatac >BM689436:8-325 (+) ggtgactcacgcctgaggtcccggcactttgggtggctgaggcgggtggattacttgaggccaggagattgagaccagtgtggccaacgtggcgaaaacccgtctcgacgaaaaatacgggaaatggcttggtatggtggcgcgtgcctgtggtcccggctactttggaggctcaggcacaggaatcgcttgagcctacgaggcggaggttgcagtgggccaggatcgtgccactgcactttatttagccaggacaacactctgtctccaaaaaaaagtttctgaaggtaaaagatatactaaaggatatacatatac End editing Edited EST: AW005163, type: ga Aligns to: chr2:162196031-162196429 (++) All mismatches: ga (209), ga (211), ga (222), ga (225), ga (231), ga (237), ga (243), ga (246), ga (251), ga (253), ga (254), ga (258), ga (283), ga (291), ga (296), ga (299), ga (301), ga (313), ga (317), ga (321), ga (328), ga (329), ga (330), ga (333), ga (336), ga (339), ga (340), ga (365), ga (389), Editing mismatches: 29, all mismatches: 29, alignment length: 399, cluster length: 181, total number of Gs: 46 Locations in RNA: 209 211 222 225 231 237 243 246 251 253 254 258 283 291 296 299 301 313 317 321 328 329 330 333 336 339 340 365 389 Locations in genome: 162196239 162196241 162196252 162196255 162196261 162196267 162196273 162196276 162196281 162196283 162196284 162196288 162196313 162196321 162196326 162196329 162196331 162196343 162196347 162196351 162196358 162196359 162196360 162196363 162196366 162196369 162196370 162196395 162196419 Upstream nucleotide (in genome): c t t a t t t t t t g t a g a t a g t t g g g t t t g t t Upstream nucleotide summary: a: 4, c: 1, g: 7, t: 17, other: 0 Downstream nucleotide (in genome): t g a g a t t c t g c t g c a a a a c c g g t a c g a a c Downstream nucleotide summary: a: 9, c: 7, g: 7, t: 6, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 0, ct: 1, ga: 2, gc: 2, gg: 2, gt: 1, ta: 5, tc: 5, tg: 3, tt: 4, other: 0 >chr2:162196031-162196429 (+) gatcatctactcaaagtttattggactgaacaaaggctgaatacagagatccaagccatgaggagtacatgaggtgtggtgcctataagccagggtcggaaactttccagacaaacctagatagctctactaggagggagtcaacgacctattgtatcaattagatcccagcctggacaagggcatgactattgctgtttggggacacgtggctctgtgttgaaggcaatgactgtgtggctgttgccatgtggcctgttctcccctaagccctgaaccaaaggttccaggcccagatgagaaggccactgggaatgcatgccataggggttgatgctggacattccccagccttccattaaatgaaaacattttctataaacttactgctttaaaaaa >AW005163:1-399 (+) gatcatctactcaaagtttattggactgaacaaaggctgaatacagagatccaagccatgaggagtacatgaggtgtggtgcctataagccagggtcggaaactttccagacaaacctagatagctctactaggagggagtcaacgacctattgtatcaattagatcccagcctggacaagggcatgactattgctgtttggggacacatagctctgtgttaaaagcaataactgtatggctattaccatataacctattctcccctaagccctgaaccaaaagttccagacccaaataaaaaggccactggaaatacataccatagaaattaatactaaacattccccagccttccattaaataaaaacattttctataaacttactactttaaaaaa End editing Edited EST: AW963625, type: ag Aligns to: chr2:109198149-109198411 (++) All mismatches: ag (21), ag (90), ag (94), ag (116), ag (124), ag (125), ag (134), ag (137), ag (151), ag (152), ag (165), ag (170), ag (177), ca (260), Editing mismatches: 13, all mismatches: 14, alignment length: 263, cluster length: 157, total number of As: 48 Locations in RNA: 21 90 94 116 124 125 134 137 151 152 165 170 177 Locations in genome: 109198169 109198238 109198242 109198264 109198272 109198273 109198282 109198285 109198299 109198300 109198313 109198318 109198325 Upstream nucleotide (in genome): c t a c t a t t c a g c c Upstream nucleotide summary: a: 3, c: 5, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g c a t a t c g a g a g g Downstream nucleotide summary: a: 4, c: 2, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 1, ca: 1, cc: 0, cg: 3, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr2:109198149-109198411 (+) tttgggaggccgaggcaggcagatcacctgaggtcaggagttcaagaccagcctgaccaacgtggtgaaaccccatcgctactaaaaatacaaaattactcgggagtggtggcgcatgcctgtaatcccagctactagggaggctgaggcaagagaattgcttgaacccaggaggcagaggttgcagtgagccaagattgtgccattggactccagcctgggcaacaagagtgaaactccatctcaaaaaaaaaaaaaacaaa >AW963625:1-263 (+) tttgggaggccgaggcaggcggatcacctgaggtcaggagttcaagaccagcctgaccaacgtggtgaaaccccatcgctactaaaaatgcaagattactcgggagtggtggcgcgtgcctgtggtcccagctgctggggaggctgaggcgggagaattgcttggacccgggaggcggaggttgcagtgagccaagattgtgccattggactccagcctgggcaacaagagtgaaactccatctcaaaaaaaaaaaaaaaaaa End editing Edited EST: BE045392, type: ga Aligns to: chr2:18056606-18057074 (++) All mismatches: ga (121), ga (130), ga (204), ga (212), ga (237), ga (274), ga (275), ga (277), ga (283), ga (286), ga (297), ga (302), ga (304), ga (310), ga (315), ga (340), ga (344), ga (347), ga (364), ga (387), ga (389), ga (399), ga (401), ga (404), ga (410), ga (413), ga (415), ga (426), ga (441), ga (442), ga (444), ga (446), ga (450), ga (451), ga (453), ga (455), ga (458), ga (461), ga (464), Editing mismatches: 39, all mismatches: 39, alignment length: 469, cluster length: 344, total number of Gs: 108 Locations in RNA: 121 130 204 212 237 274 275 277 283 286 297 302 304 310 315 340 344 347 364 387 389 399 401 404 410 413 415 426 441 442 444 446 450 451 453 455 458 461 464 Locations in genome: 18056726 18056735 18056809 18056817 18056842 18056878 18056879 18056882 18056888 18056891 18056902 18056907 18056909 18056915 18056920 18056945 18056949 18056952 18056969 18056992 18056994 18057004 18057006 18057009 18057015 18057018 18057020 18057031 18057046 18057047 18057049 18057051 18057055 18057056 18057058 18057060 18057063 18057066 18057069 Upstream nucleotide (in genome): a a a t a a g t a c a c t t t a a a a t t t a a t t t a t g t g t g g a t a t Upstream nucleotide summary: a: 16, c: 2, g: 5, t: 16, other: 0 Downstream nucleotide (in genome): a a a a g g a a g g g t a a a g a g c t t a g g c t c t g t g t g g a t c g t Downstream nucleotide summary: a: 12, c: 4, g: 14, t: 9, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 9, at: 2, ca: 0, cc: 0, cg: 1, ct: 1, ga: 2, gc: 0, gg: 1, gt: 2, ta: 6, tc: 3, tg: 3, tt: 4, other: 0 >chr2:18056606-18057074 (+) tgatggtttacatgttttatttttacctggcaaaaggtagcgtagaaataagggatttaggttttgactaggatcagatgaaactgggcagccttcagtaattcacttcacaaacatgcagatccaacagaagttcctggaaattcagtcttcaaggagcttattgtctagtggaagacaaacagttaaaatcccatatggtagattctatgaaagtgggaggcaaaggctgctgagggagtgtggaaaggaaacacacaacacacaa-cccaggatgagagaggcggcttcccagagggtcgtgattatgatgtgattatccactgaatctcatcctaagggagaaggggtctgttgggcaaagcaaagcttggtgatggggaactgtgttcttagctgaggaggcactgctgtgcattcagagagtcaagaaaaagcatggtgggtctggggagttgcaggtgtttca >BE045392:1-469 (+) tgatggtttacatgttttatttttacctggcaaaaggtagcgtagaaataagggatttaggttttgactaggatcagatgaaactgggcagccttcantaattcacttcacaaacatgcaaatccaacaaaagttcctggaaattcagtcttcaaggagcttattgtctantggaagacaaacagttaaaatcccatatggtaaattctataaaagtgggaggcaaaggctgctgaaggagtgtggaaaggaaacacacaacacacaancccaaa-taagagaagcagcttcccagaaggtcataattataatgtaattatccactgaatctcatcctaaaggaaaaagggtctgttgggcaaaacaaancttgntgatggggaactatattcttagctaaagaagcactactatacattcagagaatcaagaaaaagcataatagatctaagaaattacaagtatttca End editing Edited EST: H19157, type: ag Aligns to: chr3:50982090-50982392 (++) All mismatches: tc (51), ag (82), ag (115), ag (116), ag (123), ag (124), ag (129), ag (138), ag (139), ag (154), ag (173), ag (180), ag (181), ag (194), ag (207), ag (213), ag (222), ag (235), ag (251), Editing mismatches: 18, all mismatches: 19, alignment length: 301, cluster length: 172, total number of As: 49 Locations in RNA: 82 115 116 123 124 129 138 139 154 173 180 181 194 207 213 222 235 251 Locations in genome: 50982170 50982203 50982204 50982212 50982213 50982219 50982228 50982229 50982244 50982263 50982270 50982271 50982284 50982297 50982303 50982312 50982325 50982341 Upstream nucleotide (in genome): c c a a a c t a t g t a c c a a g g Upstream nucleotide summary: a: 7, c: 5, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): c a g a a t a a g g a t g g t c g g Downstream nucleotide summary: a: 6, c: 2, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 2, ca: 1, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 3, gt: 0, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chr3:50982090-50982392 (+) tcatcaaaaagctttgtaggcggggcatggtggctcaggcctgtaattctagcactttgggaggttgaggtgagcggatcacctgaggccagatgttcgagaccagcctggccaagatggcaaaaccccatctctactaaaagtacaaaaaattagctgggcatggtggcaggagcctgtaatcccagctattcaggaggctgaggcaggagaattgcttgaacctgggaggtggaggctgcagtgagctgagatcgcgtcatcacactcctgcctgggcaacaagaatgaaactccatctca >H19157:2-302 (+) tcatcaaaaagctttgtaggcggggcatggtggctcaggcctgtaattccagcactttgggaggttgaggtgagcggatcgcctgaggccagatgttcgagaccagcctggccgggatggc-gga-cccgtctctactggaagtacaaaaaattggctgggcatggtggcaggggcctgtggtcccagctattcgggaggctgaggcgggagagttgcttgagcctgggaggtgggggctgcagtgagctgggatcgcgtcatcacactcctgcctgggcaacaagaatgaaactccatctca End editing Edited EST: DA306380, type: ag Aligns to: chr3:37313026-37313579 (++) All mismatches: ag (223), ag (245), ag (249), ag (278), ag (282), ag (283), ag (287), ag (292), ag (293), ag (298), ag (304), ag (308), ag (321), ag (333), ag (341), ag (374), ag (384), ag (406), ag (415), ag (433), ag (442), ag (448), ag (450), ag (452), ag (453), ag (463), ag (470), ag (480), ag (489), ag (503), ag (512), ag (513), ag (517), ag (518), ag (523), ag (546), Editing mismatches: 36, all mismatches: 36, alignment length: 554, cluster length: 324, total number of As: 80 Locations in RNA: 223 245 249 278 282 283 287 292 293 298 304 308 321 333 341 374 384 406 415 433 442 448 450 452 453 463 470 480 489 503 512 513 517 518 523 546 Locations in genome: 37313248 37313270 37313274 37313303 37313307 37313308 37313312 37313317 37313318 37313323 37313329 37313333 37313346 37313358 37313366 37313399 37313409 37313431 37313440 37313458 37313467 37313473 37313475 37313477 37313478 37313488 37313495 37313505 37313514 37313528 37313537 37313538 37313542 37313543 37313548 37313571 Upstream nucleotide (in genome): c t a c c a a a a c c t c t g t t a t c t a t t a g c c c t g a c a c t Upstream nucleotide summary: a: 10, c: 12, g: 3, t: 11, other: 0 Downstream nucleotide (in genome): g g c g a g g a c t t c t c g g g c c t t t t a t t c t g g a a a g g t Downstream nucleotide summary: a: 6, c: 7, g: 12, t: 11, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 3, at: 2, ca: 2, cc: 1, cg: 4, ct: 5, ga: 1, gc: 0, gg: 1, gt: 1, ta: 1, tc: 3, tg: 4, tt: 3, other: 0 >chr3:37313026-37313579 (+) tattacccaatgccaataattaataactcatggccatcttgttttatctattagcctacccctacacttccctgaccgtaccactaccattttgcctacttgtgcagctccccctggcttccccactcccaccccattggatatttgaagcaaatttcagaagttctgttccatcagtaaatattttggtatatatctctaaaacagtgcttcccaacctccaggcacaggtccgtggccctttaggaactgggctgcacagcaggaggtaagaggcaggcaagcaagtgaaacttcatctgcatttacagctggtctccatcacccgcattaccacttgagctctgcctcctgttagatcagtggtgacattagattgtcataggagcgtgaaccctgtggagaactgtgcatacgggggatctaggttgcatgctccttatgagaatataatgcctgatgatctgtcactgtctcccatcacccccagatgggactgtctagttgtaggaaaacaagctcagggctcccactgattctatattatggtgagt >DA306380:1-554 (+) tattacccaatgccaataattaataactcatggccatcttgttttatctattagcctacccctacacttccctgaccgtaccactaccattttgcctacttgtgcagctccccctggcttccccactcccaccccattggatatttgaagcaaatttcagaagttctgttccatcagtaaatattttggtatatatctctaaaacagtgcttcccaacctccgggcacaggtccgtggccctttgggagctgggctgcacagcaggaggtaagaggcgggcgggcaggtgaggcttcgtctgcgtttgcagctggtctccgtcacccgcattgccacttgggctctgcctcctgttagatcagtggtgacattggattgtcatgggagcgtgaaccctgtggagagctgtgcatgcgggggatctaggttgcgtgctccttgtgagagtgtggtgcctgatggtctgtcgctgtctcccgtcacccccggatgggactgtctggttgtaggggaacgggctcggggctcccactgattctatattgtggtgagt End editing Edited EST: DA096512, type: ag Aligns to: chr3:13552657-13553217 (++) All mismatches: ag (20), ag (28), ag (74), ag (83), ag (87), ag (88), ag (93), ag (113), ag (128), ag (138), ag (162), ag (185), ag (195), ag (201), ag (288), Editing mismatches: 15, all mismatches: 15, alignment length: 560, cluster length: 269, total number of As: 68 Locations in RNA: 20 28 74 83 87 88 93 113 128 138 162 185 195 201 288 Locations in genome: 13552676 13552684 13552730 13552739 13552743 13552744 13552749 13552769 13552784 13552794 13552818 13552841 13552851 13552857 13552944 Upstream nucleotide (in genome): c c g a c a c a a a t g c a c Upstream nucleotide summary: a: 6, c: 6, g: 2, t: 1, other: 0 Downstream nucleotide (in genome): g c g t a g g t a a c g g t t Downstream nucleotide summary: a: 3, c: 2, g: 6, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 3, ca: 1, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr3:13552657-13553217 (+) gtttgaatcaggccaggccagtggttcacacttgtaatcccagcactttgggaggctgtggacgggtcacctgaggtcaggaattcaagaccagcctggccaacatggtgaaatcccgtctctactaaaaatacaaaaattagccaggcatggtggtatgtacctgtaatcccagctactggggaggctgaggcaggagaatcgcctgaactggggagctggaggttttagtgagctgagattgtgccactgcactctagcctgggcgacagattgattgggattccatctcaaaaaaaaaaaaaaagtttggatctgtgtccccttccaaatctcatgttgaactgtaatttcacataatccccaatgttggaggtgaggcctggtgggaggtgattggatcatgggggtggttttcttatgaaaggtttagtatcatcctcttggtactgtcctcatgacagtgagtgagttgtcatgagatgtggtcatttaaaagtgtgtggtacctccctcctctgtcccttgctcctgctctggccatgtgacctgtgggctccc >DA096512:1-560 (+) gtttgaatcaggccaggccggtggttcgcacttgtaatcccagcactttgggaggctgtggacgggtcacctggggtcaggagttcgggaccggcctggccaacatggtgaagtcccgtctctactagaaatacaaagattagccaggcatggtggtatgtgcctgtaatcccagctactgggggggctgaggcgggagagtcgcctgaactggggagctggaggttttagtgagctgagattgtgccactgcactctagcctgggcgacagattgattgggattccgtctc-aaaaaaaaaaaaaagtttggatctgtgtccccttccaaatctcatgttgaactgtaatttcacataatccccaatgttggaggtgaggcctggtgggaggtgattggatcatgggggtggttttcttatgaaaggtttagtatcatcctcttggtactgtcctcatgacagtgagtgagttgtcatgagatgtggtcatttaaaagtgtgtggtacctccctcctctgtcccttgctcctgctctggccatgtgacctgtgggctccc End editing Edited EST: DW411951, type: ag Aligns to: chr3:128470640-128470950 (++) All mismatches: ag (16), ag (43), ag (71), ag (72), ag (75), ag (106), ag (115), ag (117), ag (134), ag (146), ag (164), ag (165), ag (237), ag (273), ag (291), ag (292), Editing mismatches: 16, all mismatches: 16, alignment length: 311, cluster length: 277, total number of As: 64 Locations in RNA: 16 43 71 72 75 106 115 117 134 146 164 165 237 273 291 292 Locations in genome: 128470640 128470667 128470695 128470696 128470699 128470730 128470739 128470741 128470758 128470770 128470788 128470789 128470861 128470897 128470915 128470916 Upstream nucleotide (in genome): n t g a c g a t g a c a g t a a Upstream nucleotide summary: a: 6, c: 2, g: 4, t: 3, other: 1 Downstream nucleotide (in genome): t t a t t g t a t g a g g a a t Downstream nucleotide summary: a: 5, c: 0, g: 4, t: 7, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 3, ca: 1, cc: 0, cg: 0, ct: 1, ga: 1, gc: 0, gg: 2, gt: 1, ta: 2, tc: 0, tg: 0, tt: 1, other: 1 >chr3:128470640-128470950 (+) atatctcatcttgaattcccatcggttatgggagggacccagtgggaggtaattgaatcatgggtgcaggtcttttccatgctgttctcgagttagggaataagtcttacgagatctgatggttacaaaaaggggagcttccctgcacaagcattcctctctttgcctgccaccatacataagatgtgacttgctcctccttgccctctgccatgattgtgaggcttccccagccatgtagaattgtaagtccagttaaacctctttcttttgtaaattgcccagtcttgggtatgtctttatcatcagca >DW411951:16-326 (+) gtatctcatcttgaattcccatcggttgtgggagggacccagtgggaggtaattgggtcgtgggtgcaggtcttttccatgctgttctcgggttagggagtgagtcttacgagatctggtggttacaaaagggggagcttccctgcacgggcattcctctctttgcctgccaccatacataagatgtgacttgctcctccttgccctctgccatgattgtggggcttccccagccatgtagaattgtaagtccagttgaacctctttcttttgtaggttgcccagtcttgggtatgtctttatcatcagca End editing Edited EST: DW419295, type: ag Aligns to: chr3:127318802-127319088 (++) All mismatches: ag (73), ag (75), ag (81), ag (82), ag (90), ag (127), ag (137), ag (151), ag (153), ag (159), ag (160), ag (161), ag (200), ag (218), ag (224), ag (228), ag (240), ag (241), ag (245), ag (254), ag (273), ag (294), Editing mismatches: 22, all mismatches: 22, alignment length: 288, cluster length: 221, total number of As: 59 Locations in RNA: 73 75 81 82 90 127 137 151 153 159 160 161 200 218 224 228 240 241 245 254 273 294 Locations in genome: 127318859 127318861 127318867 127318868 127318876 127318913 127318923 127318937 127318939 127318945 127318946 127318947 127318985 127319003 127319009 127319013 127319025 127319026 127319030 127319039 127319058 127319079 Upstream nucleotide (in genome): c c t a c c a a c g a a c t c t t a c c t c Upstream nucleotide summary: a: 6, c: 10, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): c c a t c g a c g a a c t g g c a g g c g c Downstream nucleotide summary: a: 5, c: 8, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 1, at: 1, ca: 0, cc: 5, cg: 4, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 2, tt: 0, other: 0 >chr3:127318802-127319088 (+) gtgcaccatgccctttgttaggaatggtcttgtttattagtaaacatgtggtggctcacacctgtaatcccagcactttgggaggccgaggtgggcggatcacctgaggtcaggagtttgaaaccagcctggtcaacagggtgaaaccccgtctctgctaaaaatac-aaaaaattagctgtgcatggtggtgcgtgcttgtagtcccagctacttgggaggctaaggcaggagaatcacttcaacccaggaggcataggttgcagtgagctgagatcacaccactgc >DW419295:16-303 (+) gtgcaccatgccctttgttaggaatggtcttgtttattagtaaacatgtggtggctcgcgcctgtggtcccagcgctttgggaggccgaggtgggcggatcacctgaggtcgggagtttgagaccagcctggtcagcggggtggggccccgtctctgctaaaaatacaaaaaaattagctgtgcgtggtggtgcgtgcttgtggtcccggctgcttgggaggctggggcgggagaatcgcttcaacccaggaggcatgggttgcagtgagctgagatcgcaccactgc End editing Edited EST: DW419296, type: ag Aligns to: chr3:127318802-127319088 (++) All mismatches: ag (73), ag (75), ag (81), ag (82), ag (90), ag (127), ag (137), ag (151), ag (153), ag (159), ag (160), ag (161), ag (200), ag (218), ag (224), ag (228), ag (240), ag (241), ag (245), ag (254), ag (273), ag (294), Editing mismatches: 22, all mismatches: 22, alignment length: 288, cluster length: 221, total number of As: 59 Locations in RNA: 73 75 81 82 90 127 137 151 153 159 160 161 200 218 224 228 240 241 245 254 273 294 Locations in genome: 127318859 127318861 127318867 127318868 127318876 127318913 127318923 127318937 127318939 127318945 127318946 127318947 127318985 127319003 127319009 127319013 127319025 127319026 127319030 127319039 127319058 127319079 Upstream nucleotide (in genome): c c t a c c a a c g a a c t c t t a c c t c Upstream nucleotide summary: a: 6, c: 10, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): c c a t c g a c g a a c t g g c a g g c g c Downstream nucleotide summary: a: 5, c: 8, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 1, at: 1, ca: 0, cc: 5, cg: 4, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 2, tt: 0, other: 0 >chr3:127318802-127319088 (+) gtgcaccatgccctttgttaggaatggtcttgtttattagtaaacatgtggtggctcacacctgtaatcccagcactttgggaggccgaggtgggcggatcacctgaggtcaggagtttgaaaccagcctggtcaacagggtgaaaccccgtctctgctaaaaatac-aaaaaattagctgtgcatggtggtgcgtgcttgtagtcccagctacttgggaggctaaggcaggagaatcacttcaacccaggaggcataggttgcagtgagctgagatcacaccactgc >DW419296:16-303 (+) gtgcaccatgccctttgttaggaatggtcttgtttattagtaaacatgtggtggctcgcgcctgtggtcccagcgctttgggaggccgaggtgggcggatcacctgaggtcgggagtttgagaccagcctggtcagcggggtggggccccgtctctgctaaaaatacaaaaaaattagctgtgcgtggtggtgcgtgcttgtggtcccggctgcttgggaggctggggcgggagaatcgcttcaacccaggaggcatgggttgcagtgagctgagatcgcaccactgc End editing Edited EST: DW420855, type: ag Aligns to: chr3:140677876-140678158 (++) All mismatches: ag (42), ag (62), ag (63), ag (78), ag (79), ag (93), ag (94), ag (98), ag (99), ag (103), ag (111), ag (125), ag (128), ag (138), ag (144), ag (160), ag (164), ag (182), ag (189), ag (199), ag (228), ag (233), ag (234), ag (237), ag (260), ag (278), Editing mismatches: 26, all mismatches: 26, alignment length: 283, cluster length: 237, total number of As: 54 Locations in RNA: 42 62 63 78 79 93 94 98 99 103 111 125 128 138 144 160 164 182 189 199 228 233 234 237 260 278 Locations in genome: 140677901 140677921 140677922 140677937 140677938 140677952 140677953 140677957 140677958 140677962 140677970 140677984 140677987 140677997 140678003 140678019 140678023 140678041 140678048 140678058 140678087 140678092 140678093 140678096 140678119 140678137 Upstream nucleotide (in genome): c c a c a a a c a g t g t t c c t t g c g c a g a c Upstream nucleotide summary: a: 7, c: 9, g: 5, t: 5, other: 0 Downstream nucleotide (in genome): g a t a t a t a g t c g g c t g a g g g c a g a g t Downstream nucleotide summary: a: 7, c: 3, g: 10, t: 6, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 3, at: 3, ca: 4, cc: 0, cg: 3, ct: 2, ga: 1, gc: 1, gg: 2, gt: 1, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr3:140677876-140678158 (+) ggagacagagtttcgctctgtctccaggctggagtgcagtggcgcaatcttggctcactgcaatctccgccttccaaattcaagcgattctcctacctcagcctcctgagtagctgtgattacaggcatgcaccaccatgcccagctaatttctttatttttattagcaacgaggttttaccaggttggccaggctggtcttgaacttctgacctcaaggaatctgcctgcctcagtgtccaaagtgctgaaattacaggcatgagccaccatgcctggccac >DW420855:17-299 (+) ggagacagagtttcgctctgtctccgggctggagtgcagtggcgcggtcttggctcactgcggtctccgccttccaggttcgggcggttctcctgcctcagcctcctgggtggctgtgattgcaggcgtgcaccaccatgcccggctgatttctttatttttattggcaacggggttttaccgggttggccaggctggtcttgaacttctggcctcgggggatctgcctgcctcagtgtccaaggtgctgaaattacaggcgtgagccaccatgcctggccac End editing Edited EST: DW421411, type: ag Aligns to: chr3:180635463-180635692 (++) All mismatches: ag (86), ag (87), ag (125), ag (130), ag (153), ag (154), ag (156), ag (158), ag (163), ag (164), ag (184), ag (189), ag (197), ag (209), ag (229), ag (237), ag (260), ag (261), ag (272), ag (281), ag (295), Editing mismatches: 21, all mismatches: 21, alignment length: 230, cluster length: 210, total number of As: 55 Locations in RNA: 86 87 125 130 153 154 156 158 163 164 184 189 197 209 229 237 260 261 272 281 295 Locations in genome: 180635481 180635482 180635520 180635525 180635548 180635549 180635551 180635553 180635558 180635559 180635579 180635584 180635592 180635604 180635624 180635632 180635655 180635656 180635667 180635676 180635690 Upstream nucleotide (in genome): t a g c c a c t a a t a c c t a g a c c c Upstream nucleotide summary: a: 7, c: 8, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): a t g g a c t g a c c a g c c g a c g g t Downstream nucleotide summary: a: 5, c: 6, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 1, at: 1, ca: 1, cc: 1, cg: 4, ct: 2, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr3:180635463-180635692 (+) gccgtggctcatgcctgtaatcccagcactttgtggggctgaggtgcgtggatcacgaggtcaggagttcgagaccagcctggccaacatagagaaaccccgtctctactaaaaatacaaaaattagccaggtgtggtggcacgcgcctgtagtcccagctacttgggaagctgaggtgggagaatcgcttgaaccggggaggcagaggttgcagtgagccgagatcatg >DW421411:68-297 (+) gccgtggctcatgcctgtggtcccagcactttgtggggctgaggtgcgtggatcacggggtcgggagttcgagaccagcctggccggcgtggagaggccccgtctctactaaaaatgcaaagattagccgggtgtggtggcgcgcgcctgtagtcccagctgcttgggaggctgaggtgggagaatcgcttgggccggggaggcggaggttgcggtgagccgagatcgtg End editing Edited EST: DW423818, type: ag Aligns to: chr3:152004724-152004997 (++) All mismatches: ag (47), ag (113), ag (114), ag (116), ag (122), ag (123), ag (147), ag (148), ag (153), ag (179), ag (185), ag (189), ag (193), ag (221), ag (225), ag (247), ag (254), Editing mismatches: 17, all mismatches: 17, alignment length: 274, cluster length: 208, total number of As: 52 Locations in RNA: 47 113 114 116 122 123 147 148 153 179 185 189 193 221 225 247 254 Locations in genome: 152004754 152004820 152004821 152004823 152004829 152004830 152004854 152004855 152004860 152004886 152004892 152004896 152004900 152004928 152004932 152004954 152004961 Upstream nucleotide (in genome): a t a c g a a a t t c t c a c g c Upstream nucleotide summary: a: 6, c: 5, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): t a c t a a a a g g g c g c g g c Downstream nucleotide summary: a: 5, c: 4, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 0, at: 1, ca: 0, cc: 1, cg: 3, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr3:152004724-152004997 (+) ggtggccgggcgtggtggctcatgcctgtaatcccagcactttgggaggccgaggcgggtggctcacgaggtcaggagattgagaccatcctggctaacatggtgaaaccccgtctctactgaaaatacaaaaagtagccgggtgtggtggtgggtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcatgaacccaggtggagcttgcagtgagccgagatcacaccactgcactccagcgtgggtgacagtgtgagactc >DW423818:17-290 (+) ggtggccgggcgtggtggctcatgcctgtagtcccagcactttgggaggccgaggcgggtggctcacgaggtcaggagattgagaccatcctggctggcgtggtgggaccccgtctctactgaaaatacaggaagtggccgggtgtggtggtgggtgcctgtggtcccggctgctcgggaggctgaggcaggagaatggcatgagcccgggtggagcttgcagtgagccgggatcacgccactgcactccagcgtgggtgacagtgtgagactc End editing Edited EST: DW424519, type: ag Aligns to: chr3:155616880-155617160 (++) All mismatches: ag (14), ag (21), ag (30), ag (35), ag (95), ag (98), ag (99), ag (108), ag (124), ag (125), ag (130), ag (138), ag (156), ag (164), ag (165), ag (170), ag (191), ag (204), ag (205), ag (273), ag (274), Editing mismatches: 21, all mismatches: 21, alignment length: 279, cluster length: 262, total number of As: 64 Locations in RNA: 14 21 30 35 95 98 99 108 124 125 130 138 156 164 165 170 191 204 205 273 274 Locations in genome: 155616885 155616893 155616902 155616907 155616967 155616970 155616971 155616980 155616996 155616997 155617002 155617010 155617028 155617036 155617037 155617042 155617063 155617076 155617077 155617145 155617146 Upstream nucleotide (in genome): c c g c g c a a t a t t c t a c c t a c a Upstream nucleotide summary: a: 6, c: 8, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): g c t g c a c a a a c g t a t g g a a a a Downstream nucleotide summary: a: 9, c: 4, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 0, at: 1, ca: 2, cc: 1, cg: 4, ct: 1, ga: 0, gc: 1, gg: 0, gt: 1, ta: 3, tc: 1, tg: 1, tt: 0, other: 0 >chr3:155616880-155617160 (+) ggcgcagtggctcacgcctgtgatcccagcactttgggaggccgaggcgggtggatcacctgaggtcgggagttcgagaccagcctgaccaacatggagaaacccccgtctctactaaaaatacaaaattagctgggcgtggtggcgcatgactgtaatcccagctccttgggaggctgaggcaggagaatcacttaaacctgggaggcggaggttgcggtgagtggagatcatgccgttgcactccagcctcagtgacaagagcaaaactccttctcaaa >DW424519:10-288 (+) ggc-cgg-ggctcgcgcctgtggtcccggcactttgggaggccgaggcgggtggatcacctgaggtcgggagttcgagaccagcctggccggcatggagagacccccgtctctactggaaatgcaaaattggctgggcgtggtggcgcgtgactgtggtcccggctccttgggaggctgaggcgggagaatcacttggacctgggaggcggaggttgcggtgagtggagatcatgccgttgcactccagcctcagtgacaagagcggaactccttctcaaa End editing Edited EST: DW425777, type: ag Aligns to: chr3:140677876-140678143 (++) All mismatches: ag (42), ag (62), ag (63), ta (66), ag (78), ag (79), ag (93), ag (94), ag (98), ag (99), ag (103), ag (111), ag (125), ag (128), ag (138), ag (144), ag (160), ag (164), ta (177), ag (182), ag (189), ag (199), ag (228), ag (233), ag (234), ag (237), ag (260), ag (278), Editing mismatches: 26, all mismatches: 28, alignment length: 268, cluster length: 237, total number of As: 54 Locations in RNA: 42 62 63 78 79 93 94 98 99 103 111 125 128 138 144 160 164 182 189 199 228 233 234 237 260 278 Locations in genome: 140677901 140677921 140677922 140677937 140677938 140677952 140677953 140677957 140677958 140677962 140677970 140677984 140677987 140677997 140678003 140678019 140678023 140678041 140678048 140678058 140678087 140678092 140678093 140678096 140678119 140678137 Upstream nucleotide (in genome): c c a c a a a c a g t g t t c c t t g c g c a g a c Upstream nucleotide summary: a: 7, c: 9, g: 5, t: 5, other: 0 Downstream nucleotide (in genome): g a t a t a t a g t c g g c t g a g g g c a g a g t Downstream nucleotide summary: a: 7, c: 3, g: 10, t: 6, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 3, at: 3, ca: 4, cc: 0, cg: 3, ct: 2, ga: 1, gc: 1, gg: 2, gt: 1, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr3:140677876-140678143 (+) ggagacagagtttcgctctgtctccaggctggagtgcagtggcgcaatcttggctcactgcaatctccgccttccaaattcaagcgattctcctacctcagcctcctgagtagctgtgattacaggcatgcaccaccatgcccagctaatttctttatttttattagcaacgaggttttaccaggttggccaggctggtcttgaacttctgacctcaaggaatctgcctgcctcagtgtccaaagtgctgaaattacaggcatgagcc >DW425777:17-284 (+) ggagacagagtttcgctctgtctccgggctggagtgcagtggcgcggtcatggctcactgcggtctccgccttccaggttcgggcggttctcctgcctcagcctcctgggtggctgtgattgcaggcgtgcaccaccatgcccggctgatttctttatttatattggcaacggggttttaccgggttggccaggctggtcttgaacttctggcctcgggggatctgcctgcctcagtgtccaaggtgctgaaattacaggcgtgagcc End editing Edited EST: DW426965, type: ag Aligns to: chr3:152004724-152004987 (++) All mismatches: ag (47), ag (113), ag (114), ag (116), ag (122), ag (123), ag (147), ag (148), ag (153), ag (179), ag (185), ag (189), ag (193), ag (221), ag (225), ag (247), ag (254), Editing mismatches: 17, all mismatches: 17, alignment length: 264, cluster length: 208, total number of As: 52 Locations in RNA: 47 113 114 116 122 123 147 148 153 179 185 189 193 221 225 247 254 Locations in genome: 152004754 152004820 152004821 152004823 152004829 152004830 152004854 152004855 152004860 152004886 152004892 152004896 152004900 152004928 152004932 152004954 152004961 Upstream nucleotide (in genome): a t a c g a a a t t c t c a c g c Upstream nucleotide summary: a: 6, c: 5, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): t a c t a a a a g g g c g c g g c Downstream nucleotide summary: a: 5, c: 4, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 0, at: 1, ca: 0, cc: 1, cg: 3, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr3:152004724-152004987 (+) ggtggccgggcgtggtggctcatgcctgtaatcccagcactttgggaggccgaggcgggtggctcacgaggtcaggagattgagaccatcctggctaacatggtgaaaccccgtctctactgaaaatacaaaaagtagccgggtgtggtggtgggtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcatgaacccaggtggagcttgcagtgagccgagatcacaccactgcactccagcgtgggtgacag >DW426965:17-280 (+) ggtggccgggcgtggtggctcatgcctgtagtcccagcactttgggaggccgaggcgggtggctcacgaggtcaggagattgagaccatcctggctggcgtggtgggaccccgtctctactgaaaatacaggaagtggccgggtgtggtggtgggtgcctgtggtcccggctgctcgggaggctgaggcaggagaatggcatgagcccgggtggagcttgcagtgagccgggatcacgccactgcactccagcgtgggtgacag End editing Edited EST: DW427264, type: ag Aligns to: chr3:37918343-37918606 (++) All mismatches: ag (16), ag (17), ag (52), ag (63), ag (74), ag (83), ag (84), ag (94), ag (110), ag (117), ag (120), ag (123), ag (127), ag (150), ag (163), ag (176), ag (191), ag (216), ta (268), Editing mismatches: 18, all mismatches: 19, alignment length: 264, cluster length: 201, total number of As: 59 Locations in RNA: 16 17 52 63 74 83 84 94 110 117 120 123 127 150 163 176 191 216 Locations in genome: 37918343 37918344 37918379 37918390 37918401 37918410 37918411 37918421 37918437 37918444 37918447 37918450 37918454 37918477 37918490 37918503 37918518 37918543 Upstream nucleotide (in genome): n a c g c t a a a a a t c a c a a a Upstream nucleotide summary: a: 10, c: 4, g: 1, t: 2, other: 1 Downstream nucleotide (in genome): a t c g g a c c a a t g g t g g c c Downstream nucleotide summary: a: 4, c: 5, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 4, ag: 1, at: 3, ca: 0, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 1 >chr3:37918343-37918606 (+) aatcccagcactttgggaggctgaggcgggtggatcacgaggtcaggagttcaagaccagcctgactaacatggtgaaaccccgtctctactaaaaatacaaaaattagccaggtgtggtggtgcacgcctgtaatcccagctactcaggaggttgaggaaggagaatcgcttgaacccaggaggcaaaggttgcagtgaaccgagattgcgcctctgcactccatcctgggtgacacagtgagactctgtctcaaaaaaaaaa >DW427264:16-279 (+) ggtcccagcactttgggaggctgaggcgggtggatcgcgaggtcaggggttcaagaccggcctgactggcatggtgaagccccgtctctactaagaatacagaagttggccgggtgtggtggtgcacgcctgtagtcccagctactcgggaggttgaggagggagaatcgcttgagcccaggaggcaaaggttgcagtgagccgagattgcgcctctgcactccatcctgggtgacacagtgagactctgtcacaaaaaaaaaa End editing Edited EST: DW427943, type: ag Aligns to: chr3:155616880-155617149 (++) All mismatches: ag (14), ag (21), ag (30), ag (35), ag (95), ag (98), ag (99), ag (108), ag (124), ag (125), ag (130), ag (138), ag (156), ag (164), ag (165), ag (170), ag (191), ag (204), ag (205), ag (273), ag (274), Editing mismatches: 21, all mismatches: 21, alignment length: 268, cluster length: 262, total number of As: 64 Locations in RNA: 14 21 30 35 95 98 99 108 124 125 130 138 156 164 165 170 191 204 205 273 274 Locations in genome: 155616885 155616893 155616902 155616907 155616967 155616970 155616971 155616980 155616996 155616997 155617002 155617010 155617028 155617036 155617037 155617042 155617063 155617076 155617077 155617145 155617146 Upstream nucleotide (in genome): c c g c g c a a t a t t c t a c c t a c a Upstream nucleotide summary: a: 6, c: 8, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): g c t g c a c a a a c g t a t g g a a a a Downstream nucleotide summary: a: 9, c: 4, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 0, at: 1, ca: 2, cc: 1, cg: 4, ct: 1, ga: 0, gc: 1, gg: 0, gt: 1, ta: 3, tc: 1, tg: 1, tt: 0, other: 0 >chr3:155616880-155617149 (+) ggcgcagtggctcacgcctgtgatcccagcactttgggaggccgaggcgggtggatcacctgaggtcgggagttcgagaccagcctgaccaacatggagaaacccccgtctctactaaaaatacaaaattagctgggcgtggtggcgcatgactgtaatcccagctccttgggaggctgaggcaggagaatcacttaaacctgggaggcggaggttgcggtgagtggagatcatgccgttgcactccagcctcagtgacaagagcaaaac >DW427943:10-277 (+) ggc-cgg-ggctcgcgcctgtggtcccggcactttgggaggccgaggcgggtggatcacctgaggtcgggagttcgagaccagcctggccggcatggagagacccccgtctctactggaaatgcaaaattggctgggcgtggtggcgcgtgactgtggtcccggctccttgggaggctgaggcgggagaatcacttggacctgggaggcggaggttgcggtgagtggagatcatgccgttgcactccagcctcagtgacaagagcggaac End editing Edited EST: DW429124, type: ag Aligns to: chr3:101305888-101306109 (++) All mismatches: ag (17), ag (28), ag (63), ag (64), ag (65), ag (76), ag (86), ag (103), ag (108), ag (116), ag (129), ag (135), ag (143), ag (144), ag (155), ag (162), ag (172), ag (206), Editing mismatches: 18, all mismatches: 18, alignment length: 222, cluster length: 190, total number of As: 54 Locations in RNA: 17 28 63 64 65 76 86 103 108 116 129 135 143 144 155 162 172 206 Locations in genome: 101305888 101305899 101305934 101305935 101305936 101305947 101305957 101305974 101305979 101305987 101306000 101306006 101306014 101306015 101306026 101306033 101306043 101306077 Upstream nucleotide (in genome): n g a a a t t a c c g a g a c t c a Upstream nucleotide summary: a: 7, c: 4, g: 3, t: 3, other: 1 Downstream nucleotide (in genome): g c a a a g g t g g g t a c g c a g Downstream nucleotide summary: a: 5, c: 3, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 2, ca: 1, cc: 0, cg: 3, ct: 0, ga: 1, gc: 1, gg: 1, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 1 >chr3:101305888-101306109 (+) aggagttcgagaccagcctcaacatggagaaaccccgtctctactaaaaatacaatattagccgggcgtagtggtgcatgcgtgtaatcccagctactcaggaggctgagggaggagaattgcttgaacctgggaggcagaggttacagtgagccaagatcgtgccattgcactccagcctgggcaacaagagcaaaactctgtctcaaaaaaaaaaaaaaa >DW429124:17-238 (+) gggagttcgaggccagcctcaacatggagaaaccccgtctctactagggatacaatattggccgggcgtggtggtgcatgcgtgtagtcccggctactcgggaggctgaggggggagagttgcttgggcctgggaggcggaggttgcagtgagccgagatcgtgccattgcactccagcctgggcaacaggagcaaaactctgtctcaaaaaaaaaaaaaaa End editing Edited EST: DW433405, type: ag Aligns to: chr3:152004724-152004969 (++) All mismatches: ag (47), ag (113), ag (114), ag (116), ag (122), ag (123), ag (147), ag (148), ag (153), ag (179), ag (185), ag (189), ag (193), ag (221), ag (225), ag (247), ag (254), Editing mismatches: 17, all mismatches: 17, alignment length: 246, cluster length: 208, total number of As: 52 Locations in RNA: 47 113 114 116 122 123 147 148 153 179 185 189 193 221 225 247 254 Locations in genome: 152004754 152004820 152004821 152004823 152004829 152004830 152004854 152004855 152004860 152004886 152004892 152004896 152004900 152004928 152004932 152004954 152004961 Upstream nucleotide (in genome): a t a c g a a a t t c t c a c g c Upstream nucleotide summary: a: 6, c: 5, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): t a c t a a a a g g g c g c g g c Downstream nucleotide summary: a: 5, c: 4, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 0, at: 1, ca: 0, cc: 1, cg: 3, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr3:152004724-152004969 (+) ggtggccgggcgtggtggctcatgcctgtaatcccagcactttgggaggccgaggcgggtggctcacgaggtcaggagattgagaccatcctggctaacatggtgaaaccccgtctctactgaaaatacaaaaagtagccgggtgtggtggtgggtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcatgaacccaggtggagcttgcagtgagccgagatcacaccactgca >DW433405:17-262 (+) ggtggccgggcgtggtggctcatgcctgtagtcccagcactttgggaggccgaggcgggtggctcacgaggtcaggagattgagaccatcctggctggcgtggtgggaccccgtctctactgaaaatacaggaagtggccgggtgtggtggtgggtgcctgtggtcccggctgctcgggaggctgaggcaggagaatggcatgagcccgggtggagcttgcagtgagccgggatcacgccactgca End editing Edited EST: BI012058, type: ag Aligns to: chr3:183879217-183879632 (++) All mismatches: ag (135), ag (157), ag (158), ag (185), ag (186), ag (187), ag (192), ag (196), ag (238), ag (317), ag (320), ag (329), ag (332), ag (336), ag (341), ac (344), ag (351), ag (353), ag (355), ag (361), ag (362), ag (367), ag (383), ag (395), ag (396), Editing mismatches: 24, all mismatches: 25, alignment length: 416, cluster length: 262, total number of As: 68 Locations in RNA: 135 157 158 185 186 187 192 196 238 317 320 329 332 336 341 351 353 355 361 362 367 383 395 396 Locations in genome: 183879351 183879373 183879374 183879401 183879402 183879403 183879408 183879412 183879454 183879533 183879536 183879545 183879548 183879552 183879557 183879567 183879569 183879571 183879577 183879578 183879583 183879599 183879611 183879612 Upstream nucleotide (in genome): t c a c a a t t t c t t t t a a t c a a t a a a Upstream nucleotide summary: a: 10, c: 4, g: 0, t: 10, other: 0 Downstream nucleotide (in genome): t a a a a c g c c t c t t g g t c g a g t g a t Downstream nucleotide summary: a: 6, c: 5, g: 6, t: 7, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 3, at: 2, ca: 2, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 4, tg: 2, tt: 4, other: 0 >chr3:183879217-183879632 (+) aaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatatttgacagtctgagggtcctcaaacttttccactccccttcctagccccaaactgtagttactgcctgacttcttgcctcaccacattcccccggccaaactacatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacattacctctgttattatataggaaagaatgtgaaatacagtggaaagagtatggattttggagtcaagcctggggtgaaattccagctctgacatctacc >BI012058:1-416 (+) aaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatgtttgacagtctgagggtcctcggacttttccactccccttcctagccccgggctgtggttgctgcctgacttcttgcctcaccacattcccccggccaaactgcatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacgttgcctctgttgttgtatgggaaggactgtgaagtgcggtggagggagtgtggattttggagtcaggcctggggtgaggttccagctctgacatctacc End editing Edited EST: BI012072, type: ag Aligns to: chr3:183879217-183879632 (++) All mismatches: ag (135), ag (157), ag (158), ag (185), ag (186), ag (187), ag (192), ag (196), ag (238), ag (317), ag (320), ag (329), ag (332), ag (336), ag (341), ag (351), ag (353), ag (355), ag (361), ag (362), ag (367), tg (375), ag (383), ag (395), ag (396), Editing mismatches: 24, all mismatches: 25, alignment length: 416, cluster length: 262, total number of As: 68 Locations in RNA: 135 157 158 185 186 187 192 196 238 317 320 329 332 336 341 351 353 355 361 362 367 383 395 396 Locations in genome: 183879351 183879373 183879374 183879401 183879402 183879403 183879408 183879412 183879454 183879533 183879536 183879545 183879548 183879552 183879557 183879567 183879569 183879571 183879577 183879578 183879583 183879599 183879611 183879612 Upstream nucleotide (in genome): t c a c a a t t t c t t t t a a t c a a t a a a Upstream nucleotide summary: a: 10, c: 4, g: 0, t: 10, other: 0 Downstream nucleotide (in genome): t a a a a c g c c t c t t g g t c g a g t g a t Downstream nucleotide summary: a: 6, c: 5, g: 6, t: 7, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 3, at: 2, ca: 2, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 4, tg: 2, tt: 4, other: 0 >chr3:183879217-183879632 (+) aaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatatttgacagtctgagggtcctcaaacttttccactccccttcctagccccaaactgtagttactgcctgacttcttgcctcaccacattcccccggccaaactacatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacattacctctgttattatataggaaagaatgtgaaatacagtggaaagagtatggattttggagtcaagcctggggtgaaattccagctctgacatctacc >BI012072:1-416 (+) aaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatgtttgacagtctgagggtcctcggacttttccactccccttcctagccccgggctgtggttgctgcctgacttcttgcctcaccacattcccccggccaaactgcatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacgttgcctctgttgttgtatgggaaggaatgtgaagtgcggtggagggagtgtggatttgggagtcaggcctggggtgaggttccagctctgacatctacc End editing Edited EST: BX503963, type: ag Aligns to: chr3:170094397-170094877 (++) All mismatches: ag (37), ag (47), ag (48), ct (49), ag (67), ag (68), ag (94), ag (107), ag (113), ag (115), ag (117), ag (134), ag (145), ag (177), ag (182), ag (188), ag (229), ag (230), ag (236), ag (246), Editing mismatches: 19, all mismatches: 20, alignment length: 481, cluster length: 210, total number of As: 44 Locations in RNA: 37 47 48 67 68 94 107 113 115 117 134 145 177 182 188 229 230 236 246 Locations in genome: 170094433 170094443 170094444 170094463 170094464 170094490 170094503 170094509 170094511 170094513 170094530 170094541 170094573 170094578 170094584 170094625 170094626 170094632 170094642 Upstream nucleotide (in genome): c c a c a a t c c c a t c c c a a t c Upstream nucleotide summary: a: 6, c: 10, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g a c a g g c c c t t t g g a a g g c Downstream nucleotide summary: a: 4, c: 5, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 3, at: 1, ca: 3, cc: 3, cg: 3, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 1, other: 0 >chr3:170094397-170094877 (+) tctgtcacccaggctggagtgccatggagcaatctcagctcactgcaacctctgtttcctgggctcaagtgatcctcctgccttagcctcccaagtagctgggactacaggcacacatcaccttgcctggctaatttttgtattattattagagatggggttttgccttgttgcccaggccagtctcaaactcctgagctgaagcagtctgcccactttggcctcccaaagtgctaggtaatatcacagatgtgagccgttgcgcctggccaactcaagattcttaaacattaattaccatactttgttgaattggggtaggggacaattgagatatattaaattatttgccccggtctatgctaaagcctttactcagattgtcttgctttttgaagcagtttttgtgtttgcatcttgtaattttcctctctccttaggctgtcagctgtcacttagcatctatcatttagtatttctg >BX503963:1-481 (+) tctgtcacccaggctggagtgccatggagcaatctcggctcactgcggtctctgtttcctgggctcgggtgatcctcctgccttagcctcccaggtagctgggactgcaggcgcgcgtcaccttgcctggctagtttttgtattgttattagagatggggttttgccttgttgcccgggccggtctcgaactcctgagctgaagcagtctgcccactttggcctcccagggtgctgggtaatatcgcagatgtgagccgttgcgcctggccaactcaagattcttaaacattaattaccatactttgttgaattggggtaggggacaattgagatatattaaattatttgccccggtctatgctaaagcctttactcagattgtcttgctttttgaagcagtttttgtgtttgcatcttgtaattttcctctctccttaggctgtcagctgtcacttagcatctatcatttagtatttctg End editing Edited EST: AW236189, type: ga Aligns to: chr3:46477496-46477720 (++) All mismatches: ga (98), ga (109), ga (132), ga (146), ga (156), ga (170), ga (173), ga (175), ga (187), ga (200), ga (202), ga (212), ag (219), ga (220), ga (221), ga (223), Editing mismatches: 15, all mismatches: 16, alignment length: 225, cluster length: 126, total number of Gs: 45 Locations in RNA: 98 109 132 146 156 170 173 175 187 200 202 212 220 221 223 Locations in genome: 46477593 46477604 46477627 46477641 46477651 46477665 46477668 46477670 46477682 46477695 46477697 46477707 46477715 46477716 46477718 Upstream nucleotide (in genome): a a a t a a t g c t a a a g a Upstream nucleotide summary: a: 9, c: 1, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g g a a g c g c g a g g g a g Downstream nucleotide summary: a: 4, c: 2, g: 9, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 7, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 1, gc: 1, gg: 0, gt: 0, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chr3:46477496-46477720 (+) taaggagagaatatcaacaaaatttctcattttacttcttgctaagacgacagcagggaattgtaagcagatggatgggcaatccccaccttcagcaggggaggccaaggccccaacacacctggggagaagagctgggggcagtgaatggctgaggctttcttggggagctgggccatcttcttcggttttacttcctgaggaattcacaggcttccaggaggg >AW236189:1-225 (+) taaggagagaatatcaacaaaatttctcattttacttcttgctaagacgacagcagggaattgtaagcagatggatgggcaatccccaccttcagcaagggaggccaaagccccaacacacctggggagaaaagctgggggcagtaaatggctgaagctttcttggggaactagaccatcttcttcagttttacttcctaaagaattcacaagcttccgaaaagg End editing Edited EST: AW664198, type: ga Aligns to: chr3:148880204-148880606 (++) All mismatches: ga (83), ga (105), gc (151), ga (180), ga (191), ga (199), ga (218), ga (243), ga (250), ga (252), ga (281), ga (283), ga (288), ga (292), ga (295), ga (315), ga (319), ga (327), ga (328), ga (342), ga (343), ga (347), ga (355), ga (358), ga (360), ga (361), ga (370), Editing mismatches: 26, all mismatches: 27, alignment length: 403, cluster length: 288, total number of Gs: 63 Locations in RNA: 83 105 180 191 199 218 243 250 252 281 283 288 292 295 315 319 327 328 342 343 347 355 358 360 361 370 Locations in genome: 148880286 148880308 148880383 148880394 148880402 148880421 148880446 148880453 148880455 148880484 148880486 148880491 148880495 148880498 148880518 148880522 148880530 148880531 148880545 148880546 148880550 148880558 148880561 148880563 148880564 148880573 Upstream nucleotide (in genome): a a c t t c g a a t t a t a t a g g t g t a t t g g Upstream nucleotide summary: a: 8, c: 2, g: 6, t: 10, other: 0 Downstream nucleotide (in genome): a a t a a c a a g t c g a a g a g a g c t a t g t a Downstream nucleotide summary: a: 12, c: 3, g: 6, t: 5, other: 0 Dinucleotide summary: aa: 6, ac: 0, ag: 2, at: 0, ca: 0, cc: 1, cg: 0, ct: 1, ga: 3, gc: 1, gg: 1, gt: 1, ta: 3, tc: 1, tg: 3, tt: 3, other: 0 >chr3:148880204-148880606 (+) ttcatttgtttgtttattgaaaaaacagacatacataatcagtttataagataaaagtactaattaaaagactatatctgtagaaactttatttgtacatcctagaatctgtttccttttaaaaatgtctaaatttgcttttgccatggcgctaatgctaatggtaaattattgattgcgtggcccatgtgatgctgtgatattcagcccagctgtcgctttatcagtgctatatttatctggaatatagaggctccttttactgtttttaaggtgctttgtgctaaggatgaagatacaattcctcagctcttggtagacttttgggaagctcagctagtggcatgtctcccagatgtggtacttcaggaactctttttcaaactcacatcacagtacatct >AW664198:1-403 (+) ttcatttgtttgtttattgaaaaaacagacatacataatcagtttataagataaaagtactaattaaaagactatatctgtaaaaactttatttgtacatcctaaaatctgtttccttttaaaaatgtctaaatttgcttttgccatggccctaatgctaatggtaaattattgattgcatggcccatgtaatgctgtaatattcagcccagctgtcactttatcagtgctatatttatctgaaatataaaagctccttttactgtttttaaggtgctttatactaaagataaaaatacaattcctcagctcttantaaacttttgaaaagctcagctagtaacatatctcccaaatataatacttcagaaactctttttcaaactcacatcacagtacatct End editing Edited EST: AW674497, type: ga Aligns to: chr3:33155570-33156046 (++) All mismatches: ga (151), ga (172), ga (184), ga (202), ga (215), ga (224), ga (233), ga (235), ga (241), ga (243), ga (251), ga (257), ga (263), ga (268), ga (271), ga (273), ga (276), ga (283), ga (285), ga (289), ga (292), ga (295), ga (296), ga (301), ga (313), ga (315), ga (318), ga (320), ga (328), ga (329), ga (330), ga (331), ga (332), ga (336), ga (339), ga (341), ga (344), ga (346), ga (348), ga (353), ga (362), ga (365), ag (371), ga (372), ga (373), gt (374), ga (378), ga (389), cg (390), ga (399), ga (407), ga (409), ga (411), ga (412), ga (414), gt (417), ga (421), ga (431), ga (434), ga (438), ga (453), ga (460), ga (472), ga (476), Editing mismatches: 60, all mismatches: 64, alignment length: 477, cluster length: 326, total number of Gs: 104 Locations in RNA: 151 172 184 202 215 224 233 235 241 243 251 257 263 268 271 273 276 283 285 289 292 295 296 301 313 315 318 320 328 329 330 331 332 336 339 341 344 346 348 353 362 365 372 373 378 389 399 407 409 411 412 414 421 431 434 438 453 460 472 476 Locations in genome: 33155720 33155741 33155753 33155771 33155784 33155793 33155802 33155804 33155810 33155812 33155820 33155826 33155832 33155837 33155840 33155842 33155845 33155852 33155854 33155858 33155861 33155864 33155865 33155870 33155882 33155884 33155887 33155889 33155897 33155898 33155899 33155900 33155901 33155905 33155908 33155910 33155913 33155915 33155917 33155922 33155931 33155934 33155941 33155942 33155947 33155958 33155968 33155976 33155978 33155980 33155981 33155983 33155990 33156000 33156003 33156007 33156022 33156029 33156040 33156045 Upstream nucleotide (in genome): c c c g c c c c c a t c t c c c c c a c c c g c c a t c c g g g g t t c c c c t c t a g t c a c c a g t g c c a t c a a Upstream nucleotide summary: a: 9, c: 32, g: 9, t: 10, other: 0 Downstream nucleotide (in genome): c a a a g c c a a g c c c c c c c a c c c g c c a c c c g g g g c c c c c c c c c c g g c c c c a g t c a c c c c c g t Downstream nucleotide summary: a: 9, c: 38, g: 11, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 4, ag: 4, at: 1, ca: 7, cc: 22, cg: 3, ct: 0, ga: 2, gc: 2, gg: 4, gt: 1, ta: 0, tc: 10, tg: 0, tt: 0, other: 0 >chr3:33155570-33156046 (+) atggagccggggcgccggggggccgcggcgctgctagcgctgctgtgcgtggcctgcgcgctgcgcgccgggcgcgcccaatacgaacgctacagcttccgcagcttcccacgggacgagctgatgccgctcgagtcggcctaccggcacgcgctggacaagtacagcggcgagcactgggccgagagcgtgggctacctggagatcagcctgcggctgcaccgcttgctgcgcgacagcgaggccttctgccaccgcaactgcagcgccgcgccgcagcccgagcccgccgccggcctcgccagctatcccgagctgcgcctcttcgggggcctgctgcgccgcgcgcactgcctcaagcgctgcaagcagggcctgccagccttccgccagtcccagcccagccgcgaggtgctggcggacttccagcgccgcgagccctacaagttcctgcagttcgcttactt-caaggcaagt >AW674497:1-477 (+) atggagccggggcgccggggggccgcggcgctgctagcgctgctgtgcgtggcctgcgcgctgcgcgccgggcgcgcccaatacgaacgctacagcttccgcagcttcccacgggacgagctgatgccgctcgagtcggcctaccggcacacgctggacaagtacagcggcaagcactgggccaagagcgtgggctacctgaagatcagcctgcagctgcaccacttgctgcacaacagcaaagccttctaccaccacaactacagcaccacaccacagcccaaacccaccaccaacctcaccagctatcccaaactacacctcttcaaaaacctactacaccacacacactacctcaagcactacaagcgaatcctaccagccttccagcagtcccaacccagccacaaaatacttgcgaacttccagcaccacgaaccctacaagttcctacagttcacttacttgcaaa-caaat End editing Edited EST: AW827269, type: ga Aligns to: chr3:186338748-186339093 (++) All mismatches: ga (182), ga (183), ga (186), ga (194), ga (199), ga (205), ga (208), ga (209), ga (213), ga (221), ga (225), ga (227), ga (234), ga (240), ga (244), ga (262), ga (263), ga (268), ga (270), ga (276), ga (281), ga (283), ga (289), ga (294), ga (308), ga (314), ga (318), ga (320), ga (324), Editing mismatches: 29, all mismatches: 29, alignment length: 346, cluster length: 143, total number of Gs: 33 Locations in RNA: 182 183 186 194 199 205 208 209 213 221 225 227 234 240 244 262 263 268 270 276 281 283 289 294 308 314 318 320 324 Locations in genome: 186338929 186338930 186338933 186338941 186338946 186338952 186338955 186338956 186338960 186338968 186338972 186338974 186338981 186338987 186338991 186339009 186339010 186339015 186339017 186339023 186339028 186339030 186339036 186339041 186339055 186339061 186339065 186339067 186339071 Upstream nucleotide (in genome): a g t t t t c g a t t t t t t t g t t t g t t a t t a t t Upstream nucleotide summary: a: 4, c: 1, g: 4, t: 20, other: 0 Downstream nucleotide (in genome): g t a t a a g t c a t t c g a g a t a a t c c c t a t c a Downstream nucleotide summary: a: 10, c: 6, g: 4, t: 9, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 1, ca: 0, cc: 0, cg: 1, ct: 0, ga: 1, gc: 0, gg: 0, gt: 3, ta: 9, tc: 4, tg: 2, tt: 5, other: 0 >chr3:186338748-186339093 (+) ggcacagaaaacatagccaccattttgtccaagcctgggcatgggtggggggccttgtctgctggccacgcaagtgtcacatgcgatctacattaatatcaagtcttgactccctacttcccgtcattcctcacaggacagaagcagagtgggtggtggttatgtttgacagaaggcattaggttgacaacttgtcatgattttgacggtaagccaccatgattgtgttctctgcctctggttgaccttacaaaaaccattggaactgtgactttgaaaggtgctcttgctaagcttatatgtgcctgttaatgaaagtgcctgaaagaccttccttaataaagaa >AW827269:1-346 (+) ggcacagaaaacatagccaccattttgtccaagcctgggcatgggtggggggccttgtctgctggccacgcaagtgtcacatgcgatctacattaatatcaagtcttgactccctacttcccgtcattcctcacaggacagaagcagagtgggtggtggttatgtttgacagaangcattaaattaacaacttatcataattttaacaataaaccaccataattatattctctacctctagttaaccttacaaaaaccattaaaactataactttaaaagatactcttactaaacttatatgtgcctattaataaaaatacctaaaagaccttccttaataaagaa End editing Edited EST: AL697741, type: ag Aligns to: chr3:72979213-72979579 (++) All mismatches: ag (1), ag (11), ag (26), ag (30), ag (37), ag (50), ag (216), ag (234), ag (239), ag (240), ag (245), ag (257), ag (270), ag (280), ag (285), ag (318), ag (320), ag (326), ag (334), ag (337), ag (343), ag (354), ag (368), Editing mismatches: 23, all mismatches: 23, alignment length: 369, cluster length: 366, total number of As: 115 Locations in RNA: 1 11 26 30 37 50 216 234 239 240 245 257 270 280 285 318 320 326 334 337 343 354 368 Locations in genome: 72979213 72979223 72979238 72979242 72979249 72979262 72979428 72979446 72979451 72979452 72979457 72979469 72979482 72979492 72979497 72979530 72979532 72979538 72979546 72979549 72979555 72979564 72979578 Upstream nucleotide (in genome): n c a c c g c g c a c c c a c t t c c g g g c Upstream nucleotide summary: a: 3, c: 12, g: 5, t: 2, other: 1 Downstream nucleotide (in genome): g g c g g g g g a g g t t a c t g g g g g a g Downstream nucleotide summary: a: 3, c: 2, g: 15, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 0, ca: 1, cc: 1, cg: 8, ct: 2, ga: 1, gc: 0, gg: 4, gt: 0, ta: 0, tc: 0, tg: 1, tt: 1, other: 1 >chr3:72979213-72979579 (+) agggtgagccaggagaatcacttgaacccaggaagcagagggtgcagtgagttgagattgcgtcattgcactctagcttgggcaaaaagggcgaaactccatctcaaaaaaacaaaaaaaaaaacagagttgcagttatagttgataaagaatacagtcgaactgtgtgctctctataggaggtgttcatgcctgtaattctagctgatgcgggcagatcacttgagctcaggagttcaagaccagcctggccaacatggtgaaacctcatctctcctaaaaacacaaaaattagctgggcgtggtggcatgtgcctatagtcccagctactcaggagactgagg-cagg-agaattgcttgagcccag >AL697741:1-369 (+) ggggtgagccgggagaatcacttgagcccgggaagcggagggtgcagtgggttgagattgcgtcattgcactctagcttgggcaaaaagggcgaaactccatctcaaaaaaacaaaaaaaaaaacagagttgcagttatagttgataaagaatacagtcgaactgtgtgctctctataggaggtgttcatgcctgtaattctagctgatgcgggcggatcacttgagctcaggggttcgggaccggcctggccaacgtggtgaaacctcgtctctcctagaaacgcaaaaattagctgggcgtggtggcatgtgcctgtggtcccggctactcgggggactgggggcnggnaggattgcttgancccgg End editing Edited EST: DW409377, type: ag Aligns to: chr4:48841171-48841471 (++) All mismatches: ag (14), ag (18), ag (36), ag (82), ag (83), ag (90), ag (91), ag (106), ag (108), ag (115), ag (116), ag (130), ag (136), ag (140), ag (141), ag (145), ag (149), ag (161), ag (188), ag (194), ag (198), ag (212), ag (213), ag (241), ag (275), ag (291), ga (307), ga (309), Editing mismatches: 26, all mismatches: 28, alignment length: 300, cluster length: 279, total number of As: 72 Locations in RNA: 14 18 36 82 83 90 91 106 108 115 116 130 136 140 141 145 149 161 188 194 198 212 213 241 275 291 Locations in genome: 48841175 48841179 48841197 48841243 48841244 48841251 48841252 48841267 48841269 48841276 48841277 48841291 48841297 48841301 48841302 48841306 48841310 48841322 48841349 48841355 48841359 48841373 48841374 48841402 48841436 48841453 Upstream nucleotide (in genome): c c t c a c a a c a a t t a a t c c g g c g a c a c Upstream nucleotide summary: a: 9, c: 10, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): g t a a g a g c t a c a c a a g g c g g g a c g a a Downstream nucleotide summary: a: 10, c: 5, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 4, ac: 3, ag: 2, at: 0, ca: 3, cc: 1, cg: 4, ct: 2, ga: 1, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr4:48841171-48841471 (+) ggccaggcatggtggctcacacctgtaatcccagcattttgagaggccgaggtgggtggatcacttgaggtcaagagttcaagaccagcctggctaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggtgtggtggcacatgcctgtagtcccagcttcttgggaggctgaggcaggagaatggcttgaactcgggaggcagaggttgcattgagtcaggattgtgacattgcactccagcctgggtgacaaagcgagacttcatctcaaaaaaaaaaaaaaaagag >DW409377:10-309 (+) ggccgggcgtggtggctcacacctgtgatcccagcattttgagaggccgaggtgggtggatcacttgaggtcgggagttcgggaccagcctggctagcgtggtgaggccctgtctctactgaaaatgcaaggattggccgggtgtggtggcgcatgcctgtagtcccagcttcttggggggctggggcgggagaatggcttgggctcgggaggcagaggttgcattgagtcgggattgtgacattgcactccagcctgggtgacagagcgagacttcatc-cgaaaaaaaaaaaaaaaaaa End editing Edited EST: DW410473, type: ag Aligns to: chr4:79757135-79757452 (++) All mismatches: ag (16), ag (197), ag (198), ag (203), ag (241), ag (250), ag (265), ag (267), ag (269), ag (273), ag (275), ag (286), ag (289), ag (292), ag (293), ag (295), ag (302), ag (305), ag (331), Editing mismatches: 19, all mismatches: 19, alignment length: 318, cluster length: 316, total number of As: 80 Locations in RNA: 16 197 198 203 241 250 265 267 269 273 275 286 289 292 293 295 302 305 331 Locations in genome: 79757135 79757316 79757317 79757322 79757360 79757369 79757384 79757386 79757388 79757392 79757394 79757405 79757408 79757411 79757412 79757414 79757421 79757424 79757450 Upstream nucleotide (in genome): n t a c c g a c t g a t t a a t a t t Upstream nucleotide summary: a: 6, c: 3, g: 2, t: 7, other: 1 Downstream nucleotide (in genome): g a t g g g c t g a c c a a t c t g g Downstream nucleotide summary: a: 4, c: 4, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 3, ca: 0, cc: 0, cg: 2, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 2, tg: 3, tt: 0, other: 1 >chr4:79757135-79757452 (+) agtgtttattttcccatttaatggtgtctgtagttgtattttcttatcctttttttttcctggaattagtaattacctcggttttcatttgcctaattttcttcatgtatattaatattttagtcccgcattttccaatagaagtaaaaataattggctgggcgccgtggctcacactgataatcccagcactttgggaggctgaggcgggcggatcaagaggtcaggagttcgagaccagcctgaccaacatagtgaaaccccttctctactaaaaatacaaaaaattagctgggcgtagtggtggacgcctgtagt >DW410473:16-333 (+) ggtgtttattttcccatttaatggtgtctgtagttgtattttcttatcctttttttttcctggaattagtaattacctcggttttcatttgcctaattttcttcatgtatattaatattttagtcccgcattttccaatagaagtaaaaataattggctgggcgccgtggctcacactgatggtcccggcactttgggaggctgaggcgggcggatcaagaggtcgggagttcgggaccagcctgaccagcgtggtggagccccttctctgctgaaggtgcaaaaagttggctgggcgtagtggtggacgcctgtggt End editing Edited EST: DW414861, type: ag Aligns to: chr4:2634834-2635131 (++) All mismatches: ag (53), ag (58), ag (79), ag (83), ag (88), ag (98), ag (106), ag (107), ag (112), ag (124), ag (127), ag (132), ct (141), ag (162), ag (188), ag (194), ag (198), ag (205), ag (211), ag (215), ag (221), ag (224), ag (229), ag (230), ag (241), Editing mismatches: 24, all mismatches: 25, alignment length: 298, cluster length: 189, total number of As: 52 Locations in RNA: 53 58 79 83 88 98 106 107 112 124 127 132 162 188 194 198 205 211 215 221 224 229 230 241 Locations in genome: 2634870 2634875 2634896 2634900 2634905 2634915 2634923 2634924 2634929 2634941 2634944 2634949 2634979 2635005 2635011 2635015 2635022 2635028 2635032 2635038 2635041 2635046 2635047 2635058 Upstream nucleotide (in genome): a c c c c c c a c t g a t t c t g g c a c g a c Upstream nucleotide summary: a: 5, c: 11, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): t g g g c g a g g t t c g g g c g g g t c a c g Downstream nucleotide summary: a: 2, c: 5, g: 13, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 2, ca: 1, cc: 2, cg: 8, ct: 0, ga: 1, gc: 0, gg: 2, gt: 1, ta: 0, tc: 1, tg: 2, tt: 1, other: 0 >chr4:2634834-2635131 (+) gtggcttgaggccgggtgcggtggctcacgcctgtaattccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagttcaagaccagcctggccaatatgatgaaaccccgtctctactaaaaataacaaaaattagccgggcatggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggcagaggttgcattgagccaagattgtgccagtgcactccagtctgggcaacagagcgagactctgtctcacacac >DW414861:17-314 (+) gtggcttgaggccgggtgcggtggctcacgcctgtagttccggcactttgggaggccgaggcgggcggatcgcctgaggtcgggagttcgggaccggcctggccaatgtggtgaagccccgtctttactaaaaataacaaaaattggccgggcatggtggcgggcgcctgtggtcccggctgctcggggggctggggcgggagagtcgcttgggcccgggaggcggaggttgcattgagccaagattgtgccagtgcactccagtctgggcaacagagcgagactctgtctcacacac End editing Edited EST: DW416615, type: ag Aligns to: chr4:128924201-128924492 (++) All mismatches: ag (78), ag (84), ag (128), ag (167), ag (173), ag (176), ag (180), ag (182), ag (191), ag (218), ag (228), ag (232), ag (241), ag (245), ag (254), ag (264), gc (274), ag (280), ag (284), ag (289), ca (300), Editing mismatches: 19, all mismatches: 21, alignment length: 292, cluster length: 212, total number of As: 55 Locations in RNA: 78 84 128 167 173 176 180 182 191 218 228 232 241 245 254 264 280 284 289 Locations in genome: 128924262 128924268 128924312 128924351 128924357 128924360 128924364 128924366 128924375 128924402 128924412 128924416 128924425 128924429 128924438 128924448 128924464 128924468 128924473 Upstream nucleotide (in genome): c t c c t t a t t t t c g c c c c g g Upstream nucleotide summary: a: 1, c: 8, g: 3, t: 7, other: 0 Downstream nucleotide (in genome): c a g t c t t c g g c g g g c g g g g Downstream nucleotide summary: a: 1, c: 5, g: 10, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 2, cg: 5, ct: 1, ga: 0, gc: 0, gg: 3, gt: 0, ta: 1, tc: 3, tg: 2, tt: 1, other: 0 >chr4:128924201-128924492 (+) tcaccttcattatttggtcattgtagaaattaattcaaataagccgggcacggtggctcacacctgtaatcccagcactttgggaggctgaggtgggcggatcatgaggtcaggagttcgagaccagcctggccaatatggtgaaaccccatctctactataaatacaaaaattagctgggcatggtggccgcgtggctgtagtcccagctacacaggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcagtgagccgagatcgcgccactgtactct >DW416615:17-308 (+) tcaccttcattatttggtcattgtagaaattaattcaaataagccgggcacggtggctcacgcctgtgatcccagcactttgggaggctgaggtgggcggatcatgaggtcgggagttcgagaccagcctggccaatatggtgaaaccccgtctctgctgtaagtgcaaaaattggctgggcatggtggccgcgtggctgtggtcccagctgcacgggaggctggggcgggagaatcgcttgaacccgggaggtggacgttgcggtgggccgggatcgcgccaatgtactct End editing Edited EST: DW423499, type: ag Aligns to: chr4:48840079-48840351 (++) All mismatches: ag (18), ag (19), ag (45), ag (49), ag (54), ag (59), ag (64), ag (84), ag (88), ag (109), ag (112), ag (113), ag (116), ag (118), ag (122), ag (123), ag (124), ag (127), ag (132), ag (143), ag (153), ag (154), ag (194), ag (206), ag (218), ag (219), ag (223), ag (224), ga (289), Editing mismatches: 28, all mismatches: 29, alignment length: 273, cluster length: 207, total number of As: 59 Locations in RNA: 18 19 45 49 54 59 64 84 88 109 112 113 116 118 122 123 124 127 132 143 153 154 194 206 218 219 223 224 Locations in genome: 48840079 48840080 48840106 48840110 48840115 48840120 48840125 48840145 48840149 48840170 48840173 48840174 48840177 48840179 48840183 48840184 48840185 48840188 48840193 48840204 48840214 48840215 48840255 48840267 48840279 48840280 48840284 48840285 Upstream nucleotide (in genome): n a c c c g c g t t t a a t a a a t g c t a g c c a c a Upstream nucleotide summary: a: 9, c: 8, g: 4, t: 6, other: 1 Downstream nucleotide (in genome): a t g g c g g c t c a g t c a a t g g g a t a g a g a g Downstream nucleotide summary: a: 8, c: 4, g: 11, t: 5, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 3, at: 4, ca: 2, cc: 1, cg: 5, ct: 0, ga: 1, gc: 1, gg: 2, gt: 0, ta: 2, tc: 2, tg: 1, tt: 1, other: 1 >chr4:48840079-48840351 (+) aatcccagcactttgggaggctgaggcaggcagatcacctgaggtcaggagttcgagaccagcctgacctatatggtgaaaccccgtctctactaagaatacaaaaattagctgagcatggtggcaggtgcctgtaattccagctactcgagaggctgagacaggagaatcgcttgaacccgggaggcagaggttgcagcaagccaagatcgtgccactgcactccagcctgggcgacagagcgagactccatctcaaaaaaaaaaaaaaaga >DW423499:18-290 (+) ggtcccagcactttgggaggctgaggcgggcggatcgcctggggtcgggagttcgagaccagcctggcctgtatggtgaaaccccgtctctgctgggagtgcaagggttggctgggcatggtggcgggtgcctgtggttccagctactcgagaggctgagacaggagaatcgcttggacccgggaggcggaggttgcagcgggccgggatcgtgccactgcactccagcctgggcgacagagcgagactccatctcaaaaaaaaaaaaaaaaa End editing Edited EST: DW465179, type: ag Aligns to: chr4:79757135-79757478 (++) All mismatches: ag (16), ag (197), ag (198), ag (203), ag (241), ag (250), ag (265), ag (267), ag (269), ag (273), ag (275), ag (286), ag (289), ag (292), ag (293), ag (295), ag (302), ag (305), ag (331), ag (337), Editing mismatches: 20, all mismatches: 20, alignment length: 344, cluster length: 322, total number of As: 81 Locations in RNA: 16 197 198 203 241 250 265 267 269 273 275 286 289 292 293 295 302 305 331 337 Locations in genome: 79757135 79757316 79757317 79757322 79757360 79757369 79757384 79757386 79757388 79757392 79757394 79757405 79757408 79757411 79757412 79757414 79757421 79757424 79757450 79757456 Upstream nucleotide (in genome): n t a c c g a c t g a t t a a t a t t c Upstream nucleotide summary: a: 6, c: 4, g: 2, t: 7, other: 1 Downstream nucleotide (in genome): g a t g g g c t g a c c a a t c t g g g Downstream nucleotide summary: a: 4, c: 4, g: 8, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 3, ca: 0, cc: 0, cg: 3, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 2, tg: 3, tt: 0, other: 1 >chr4:79757135-79757478 (+) agtgtttattttcccatttaatggtgtctgtagttgtattttcttatcctttttttttcctggaattagtaattacctcggttttcatttgcctaattttcttcatgtatattaatattttagtcccgcattttccaatagaagtaaaaataattggctgggcgccgtggctcacactgataatcccagcactttgggaggctgaggcgggcggatcaagaggtcaggagttcgagaccagcctgaccaacatagtgaaaccccttctctactaaaaatacaaaaaattagctgggcgtagtggtggacgcctgtagtcccagctacttgggaggctgaggcag >DW465179:16-359 (+) ggtgtttattttcccatttaatggtgtctgtagttgtattttcttatcctttttttttcctggaattagtaattacctcggttttcatttgcctaattttcttcatgtatattaatattttagtcccgcattttccaatagaagtaaaaataattggctgggcgccgtggctcacactgatggtcccggcactttgggaggctgaggcgggcggatcaagaggtcgggagttcgggaccagcctgaccagcgtggtggagccccttctctgctgaaggtgcaaaaagttggctgggcgtagtggtggacgcctgtggtcccggctacttgggaggctgaggcag End editing Edited EST: DW467380, type: ag Aligns to: chr4:25210911-25211240 (++) All mismatches: ag (52), ag (82), ag (86), ag (87), ag (92), ag (93), ag (120), ag (122), ag (123), ag (132), ag (150), at (172), ag (193), ag (203), ag (214), ag (217), ag (221), ag (223), ag (226), ag (236), ag (248), ag (258), ag (259), ag (299), ac (320), ag (328), ag (329), ag (334), ag (344), Editing mismatches: 27, all mismatches: 29, alignment length: 330, cluster length: 293, total number of As: 86 Locations in RNA: 52 82 86 87 92 93 120 122 123 132 150 193 203 214 217 221 223 226 236 248 258 259 299 328 329 334 344 Locations in genome: 25210946 25210976 25210980 25210981 25210986 25210987 25211014 25211016 25211017 25211026 25211044 25211087 25211097 25211108 25211111 25211115 25211117 25211120 25211130 25211142 25211152 25211153 25211193 25211222 25211223 25211228 25211238 Upstream nucleotide (in genome): g a a a a a t t a c c a a t t a t a c c t a g c a c c Upstream nucleotide summary: a: 12, c: 7, g: 2, t: 6, other: 0 Downstream nucleotide (in genome): g g a g a g t a t c g c c c a t c a g g a t g a g c c Downstream nucleotide summary: a: 7, c: 7, g: 9, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 4, at: 3, ca: 1, cc: 3, cg: 3, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 3, tc: 2, tg: 0, tt: 1, other: 0 >chr4:25210911-25211240 (+) gtgagccatggtctatgccactgcactccagcctgagtgacagagtgagacctttcctcaaaaaaagaaaagaaaaagaggccaggcacggttgctcatacctataatccccagcactttgggaggccgaggcaggcagattgcctgaggtcaggagttcaagaccagcctgggcaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggcatggtggcaggcgcctgtaatcccagctacttgggaggctgaggcaggacaatcgcttgagcctgggaggtgggggttgcagtgagccaagatcacgccattgcact >DW467380:17-346 (+) gtgagccatggtctatgccactgcactccagcctgggtgacagagtgagacctttcctcaaaaaaggaagggaaagggaggccaggcacggttgctcatacctgtggtccccagcgctttgggaggccgaggcgggcagattgcctgaggtcaggtgttcaagaccagcctgggcagcatggtgaagccctgtctctgctgaaagtgcagaaattagccgggcatggtggcgggcgcctgtggtcccagctacttgggaggctgaggcaggacaatcgcttgggcctgggaggtgggggttgccgtgagccgggatcgcgccattgcgct End editing Edited EST: BX953346, type: ag Aligns to: chr4:374101-374422 (++) All mismatches: ag (84), ag (91), ag (134), ag (157), ag (158), ag (166), ag (190), ag (191), ag (197), ag (223), ag (224), ag (237), ag (238), ag (250), ag (256), ag (259), ag (264), ag (265), ag (293), Editing mismatches: 19, all mismatches: 19, alignment length: 322, cluster length: 210, total number of As: 56 Locations in RNA: 84 91 134 157 158 166 190 191 197 223 224 237 238 250 256 259 264 265 293 Locations in genome: 374181 374188 374231 374254 374255 374263 374287 374288 374294 374320 374321 374334 374335 374347 374353 374356 374361 374362 374390 Upstream nucleotide (in genome): c a c c a g t a t t a c a c a c g a c Upstream nucleotide summary: a: 7, c: 7, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): c t g a c a a a g a t a g g t g a c a Downstream nucleotide summary: a: 8, c: 3, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 3, ca: 3, cc: 1, cg: 3, ct: 0, ga: 2, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chr4:374101-374422 (+) agttgatttctaccaaatgctaaccataatactgtatatgtgttaataaattttattttcggccaggcgtggtggctcacacctgtaatcccagcactttgggcgcccaaggcaggtggatcatgaggtcaggagtttgagaccagtctggccaacatggtgaaaccccgtctctactacaaatataaaaattagctgggtgtggtgtcaggcgcctgtaatcccagctactcaagaggttgaggcaggagaatcagttgaacctgggaggtggagattgcagtgagccaagatcatgccattgcactccagcctgggtgac >BX953346:4-325 (+) agttgatttctaccaaatgctaaccataatactgtatatgtgttaataaattttattttcggccaggcgtggtggctcacgcctgtagtcccagcactttgggcgcccaaggcaggtggatcatgaggtcgggagtttgagaccagtctggccggcatggtggaaccccgtctctactacaaatatggaaattggctgggtgtggtgtcaggcgcctgtggtcccagctactcgggaggttgaggcgggagagtcggttgggcctgggaggtggagattgcagtgagccgagatcatgccattgcactccagcctgggtgac End editing Edited EST: BF433150, type: ag Aligns to: chr4:166423328-166423879 (++) All mismatches: ag (53), ag (54), ag (72), ag (98), ag (104), ag (117), ag (122), ag (132), ag (136), ag (142), ag (144), ag (148), ag (152), ag (186), ag (187), ag (188), ag (192), ag (224), ag (237), ag (238), ag (239), ag (241), ag (242), ag (263), ag (264), ag (265), ag (277), ag (286), ag (293), ag (295), Editing mismatches: 30, all mismatches: 30, alignment length: 552, cluster length: 243, total number of As: 60 Locations in RNA: 53 54 72 98 104 117 122 132 136 142 144 148 152 186 187 188 192 224 237 238 239 241 242 263 264 265 277 286 293 295 Locations in genome: 166423380 166423381 166423399 166423425 166423431 166423444 166423449 166423459 166423463 166423469 166423471 166423475 166423479 166423513 166423514 166423515 166423519 166423551 166423564 166423565 166423566 166423568 166423569 166423590 166423591 166423592 166423604 166423613 166423620 166423622 Upstream nucleotide (in genome): t a c c c c c t t t c c c t a a c a c a a c a c a a t g c c Upstream nucleotide summary: a: 9, c: 14, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): a a t g g c g g g c g c c a a g g a a a c a t a a g c g c c Downstream nucleotide summary: a: 10, c: 8, g: 10, t: 2, other: 0 Dinucleotide summary: aa: 5, ac: 1, ag: 2, at: 1, ca: 3, cc: 5, cg: 5, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 2, tg: 2, tt: 0, other: 0 >chr4:166423328-166423879 (+) cttcgtcgtcttctttttcttctttcttgggattccctctgttgtccaggctaaatttcagtggccccatcatggctcactgtagccctaacctcccaggcacaggcaatcctttcacctcagcctcctgtagctaggactacaggcacacaccactgcacccagctaatttttgtatattttgtaaagacagggttttgccatgttgcacaggctggtctcaaattccttggctcaaacaatccatctgccttggcctgccaaagtgctgggattacaggcatgagccaccacactcggcctatacttctcttaattcagtctaagatgatactgacatttatttgaagttaagtcacattgttgtttcatataaacttaaaataaatgaaaaatctgaactaagattttttgatctggtttggaagtgaaggttagagcagtcaaggatatgggagatacatgagctgaaggttaaacagatctggattatgaacaagagggtcaaattgctttaggtaagaaaaataagaagagaaggggactgagtag >BF433150:1-552 (+) cttcgtcgtcttctttttcttctttcttgggattccctctgttgtccaggctggatttcagtggccccatcgtggctcactgtagccctaacctcccgggcacgggcaatcctttcgcctcggcctcctgtggctgggactgcgggcgcacgccactgcacccagctaatttttgtatattttgtggggacggggttttgccatgttgcacaggctggtctcagattccttggctcgggcggtccatctgccttggcctgccggggtgctgggattgcaggcatgggccaccgcgctcggcctatacttctcttaattcagtctaagatgatactgacatttatttgaagttaagtcacattgttgtttcatataaacttaaaataaatgaaaaatctgaactaagattttttgatctggtttggaagtgaaggttagagcagtcaaggatatgggagatacatgagctgaaggttaaacagatctggattatgaacaagagggtcaaattgctttaggtaagaaaaataagaagagaaggggactgagtag End editing Edited EST: AW276952, type: ga Aligns to: chr4:92307243-92307586 (++) All mismatches: ga (53), ga (96), ga (114), ga (125), ga (157), ga (160), ga (178), ga (192), ga (195), ga (213), ga (249), ga (262), ga (281), ga (303), ga (306), ga (317), ga (318), Editing mismatches: 17, all mismatches: 17, alignment length: 344, cluster length: 266, total number of Gs: 58 Locations in RNA: 53 96 114 125 157 160 178 192 195 213 249 262 281 303 306 317 318 Locations in genome: 92307295 92307338 92307356 92307367 92307399 92307402 92307420 92307434 92307437 92307455 92307491 92307504 92307523 92307545 92307548 92307559 92307560 Upstream nucleotide (in genome): a a g t a a a a a t a t t a t t g Upstream nucleotide summary: a: 9, c: 0, g: 2, t: 6, other: 0 Downstream nucleotide (in genome): g a a a g t g g c a g t a a g g a Downstream nucleotide summary: a: 7, c: 1, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 5, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 2, gc: 0, gg: 0, gt: 0, ta: 3, tc: 0, tg: 2, tt: 1, other: 0 >chr4:92307243-92307586 (+) tgccctgaatcctgttttttttttaaataccattccccagtgaatggacccagggttccaccaagaaatggctgattacagaactggggcaacaagagtccaaggtaagcctggagaaacttttgatgtcagataataaatgttgaaaaaattataggagtttatcaaaaggtcacaggggatatcttgaaggagctctcactgtaaaatctgagataatttaatctccaaataattaaggatagcaaggaataataaattgtttaacaacagaattcatgagtctatattagtattaaagagatggcaaatagatggattatttaattgaataaatacataac >AW276952:1-344 (+) tgccctgaatcctgttttttttttaaataccattccccagtgaatggacccaaggttccaccaagaaatggctgattacagaactggggcaacaaaagtccaaggtaancctgaagaaacttttaatgtcagataataaatgttgaaaaaattataagaatttatcaaaaggtcacaagggatatcttgaaagaactctcactgtaaaatctaagataatttaatctccaaataattaaggatagcaaagaataataaattatttaacaacagaattcataagtctatattagtattaaagaaatagcaaatagataaattatttaattgaataaatacataac End editing Edited EST: AV760481, type: ag Aligns to: chr4:56827656-56827950 (++) All mismatches: ag (14), tg (22), ag (37), ag (105), ag (111), ag (114), ag (118), ag (155), ag (220), ag (224), ag (225), ag (230), ag (232), Editing mismatches: 12, all mismatches: 13, alignment length: 295, cluster length: 219, total number of As: 59 Locations in RNA: 14 37 105 111 114 118 155 220 224 225 230 232 Locations in genome: 56827669 56827692 56827760 56827766 56827769 56827773 56827810 56827875 56827879 56827880 56827885 56827887 Upstream nucleotide (in genome): c a t t t a a g c a c c Upstream nucleotide summary: a: 4, c: 4, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): c g t c a t t g a g c c Downstream nucleotide summary: a: 2, c: 4, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 2, ca: 1, cc: 3, cg: 0, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 0, tt: 1, other: 0 >chr4:56827656-56827950 (+) cacggtggctcacacctgtaatcccagcacttgggaaggctgaggcgagcagatcacctgaggtctggagttggcgaccagcctgaccaacatggagaaaccctatctctactaaaaatacaaaattagccgggtgtggtggcgcattcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacccgggaggcagaggttgtggtgagccaagatcacaccattgcactccagcctgggcaacaagagcgaaaactctgtctaaaaaaaaaaaaaaaaaaaa >AV760481:1-295 (+) cacggtggctcacgcctgtaagcccagcacttgggagggctgaggcgagcagatcacctgaggtctggagttggcgaccagcctgaccaacatggagaaaccctgtctctgctgaaagtacaaaattagccgggtgtggtggcgcattcctgtagtcccagctacttgggaggctgaggcaggagaattgcttgaacccgggaggcagaggttgtggtgggccgggatcgcgccattgcactccagcctgggcaacaagagcgaaaactctgtcnaaaaaaaaaaaaaaaaaaaa End editing Edited EST: R96084, type: ag Aligns to: chr5:43224842-43225218 (++) All mismatches: ag (22), ag (57), ag (58), ag (74), ag (83), ag (86), ag (96), ag (114), ag (138), ag (140), ag (142), ag (154), ag (186), ag (217), Editing mismatches: 14, all mismatches: 14, alignment length: 378, cluster length: 196, total number of As: 41 Locations in RNA: 22 57 58 74 83 86 96 114 138 140 142 154 186 217 Locations in genome: 43224863 43224898 43224899 43224915 43224924 43224927 43224937 43224955 43224979 43224981 43224983 43224995 43225027 43225058 Upstream nucleotide (in genome): g c a c a t t c a t g c g a Upstream nucleotide summary: a: 4, c: 4, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): t a g g g g c c t g g c c g Downstream nucleotide summary: a: 1, c: 4, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 3, at: 1, ca: 1, cc: 2, cg: 1, ct: 0, ga: 0, gc: 1, gg: 1, gt: 1, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr5:43224842-43225218 (+) aggcttgggggcagtggcgcgatctcggctcactgcaacctctgcctcctgccttcaagcaattctctgcctcagcctcccaagtagctgcgattacaggcgtccaccatcacacccagctaatttttgtatttttaatagagatgggatttcaccatcttggccaggctgatcttgaacccctgaccttgtgatccacctgccttggcctcccaaagtgccgggattacaggcctaagccattgcgcctggccacaagtggatttttaaaagggggacagatacaaaaagagtggg-ctgatacaaagttgttttccaggaattctcattcatttacagaaataacattgattagcgattgactatatattcttaag >R96084:1-378 (+) aggnttgggggcagtggcgcggtctcggctcactgcaacctctgcctcctgccttcgggcaattctctgcctcggcctcccaggnggctgcgattgcaggcntccaccatcacgcccagctaatttttgtatttttagtggggatgggatttcgccatcttggccaggctgntcttgaacccctggccttgtgatccacctgccttggcctcccaaggtgccgggnttacaggcctaagccattgcgcctggccacaagtggatttttaaaagggggacagatacaaaaagagtggggctnatacaaagttgttttccaggaattctcattcatttacagaaataacatngattagcgattgactatanattctnaag End editing Edited EST: DB146886, type: ag Aligns to: chr5:37050666-37051236 (++) All mismatches: ag (329), ag (335), ag (379), ag (393), ag (401), ag (408), ag (461), ag (473), ag (484), ag (485), ag (499), ag (502), Editing mismatches: 12, all mismatches: 12, alignment length: 571, cluster length: 174, total number of As: 33 Locations in RNA: 329 335 379 393 401 408 461 473 484 485 499 502 Locations in genome: 37050994 37051000 37051044 37051058 37051066 37051073 37051126 37051138 37051149 37051150 37051164 37051167 Upstream nucleotide (in genome): c c c a g c t c c a a t Upstream nucleotide summary: a: 3, c: 6, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g g c g g g c g a a g a Downstream nucleotide summary: a: 3, c: 2, g: 7, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 0, ca: 1, cc: 1, cg: 4, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr5:37050666-37051236 (+) tttgttgacattttgccacaattgctttctctctctccctttatacatctgcttttttctgaatcatttggtaggaagtttcaagtaattatgattctttaccactaaacacttcagcatatattttctaagaacaaggacattctcttacaaaaccgtaatataatcattaaatttgggaagtttaacactgatacaatattatctaatatacagttcatttgcagattctgctagttaaccaagggcgttctctatagcctttttcctcttctttttttttgaggcaagatcttgctctgtttcccaggctggagtgcagtgatgcagtctcagcttacctgcagcctccgcctcctggattcaagcactcttcccacctctgcctcccaagtagctgagactacaggtgtgcgccaccacctggctaatttttgtgtttttgtagagacggggttttaccatgttggccaggctggtctcaaacttctgagctcaagtaatctgcctgcctcagtgtcccaaagtgctgggattacaggcatgagccaccgcacccaccttacagcct >DB146886:1-571 (+) tttgttgacattttgccacaattgctttctctctctccctttatacatctgcttttttctgaatcatttggtaggaagtttcaagtaattatgattctttaccactaaacacttcagcatatattttctaagaacaaggacattctcttacaaaaccgtaatataatcattaaatttgggaagtttaacactgatacaatattatctaatatacagttcatttgcagattctgctagttaaccaagggcgttctctatagcctttttcctcttctttttttttgaggcaagatcttgctctgtttcccaggctggagtgcagtgatgcggtctcggcttacctgcagcctccgcctcctggattcaagcactcttcccgcctctgcctcccaggtagctgggactacgggtgtgcgccaccacctggctaatttttgtgtttttgtagagacggggttttgccatgttggccgggctggtctcggacttctgagctcaggtgatctgcctgcctcagtgtcccaaagtgctgggattacaggcatgagccaccgcacccaccttacagcct End editing Edited EST: DB120986, type: ag Aligns to: chr5:61634179-61634745 (++) All mismatches: ag (37), ag (41), ag (42), ag (55), ag (63), ag (64), ag (77), ag (122), ag (160), ag (167), ag (174), ag (191), ag (213), Editing mismatches: 13, all mismatches: 13, alignment length: 567, cluster length: 177, total number of As: 43 Locations in RNA: 37 41 42 55 63 64 77 122 160 167 174 191 213 Locations in genome: 61634215 61634219 61634220 61634233 61634241 61634242 61634255 61634300 61634338 61634345 61634352 61634369 61634391 Upstream nucleotide (in genome): c c a c c a t t a t a c t Upstream nucleotide summary: a: 4, c: 5, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a a t g a g c g a a g g c Downstream nucleotide summary: a: 5, c: 2, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 1, ca: 3, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr5:61634179-61634745 (+) aatcttggctcacttcaacctctgcctcccgggctcaagcaattctcctgtctcagcctcccaagtatctgggattacagacacccaccaccacacctggataattttttgtatttttagtagagttagagttccaccatgttggccagggtggtctcaaactcctaatctcaagtgatctgcccacctcagcctcccacagtgctgggattacaggcctgagccaccacatctggcttataaaactttaaaagaaaatgtaagagactgttttagggatctcaatcttaggaaaaatttcatagcataccaaaaaacaacaaaaaaaatccataatggaaaaacatacatttgactacattagaattaagaatttaaatgcatcaaaagcaccataaagaacatgaaaagataagccacaactttgtagaaaatatttgctatacatacaacaaaagattaatatcaagaatatatatagaattcctatagagaaatagcccaaacaaagaggccccaacactcaagtcagtactcaaaaggcctgaatggctaacaagcacaaaa >DB120986:1-567 (+) aatcttggctcacttcaacctctgcctcccgggctcgagcggttctcctgtctcggcctcccgggtatctgggattgcagacacccaccaccacacctggataattttttgtatttttagtggagttagagttccaccatgttggccagggtggtctcagactcctgatctcaggtgatctgcccacctcggcctcccacagtgctgggattgcaggcctgagccaccacatctggcttataaaactttaaaagaaaatgtaagagactgttttagggatctcaatcttaggaaaaatttcatagcataccaaaaaacaacaaaaaaaatccataatggaaaaacatacatttgactacattagaattaagaatttaaatgcatcaaaagcaccataaagaacatgaaaagataagccacaactttgtagaaaatatttgctatacatacaacaaaagattaatatcaagaatatatatagaattcctatagagaaatagcccaaacaaagaggccccaacactcaagtcagtactcaaaaggcctgaatggctaacaagcacaaaa End editing Edited EST: DW412349, type: ag Aligns to: chr5:68472423-68472730 (++) All mismatches: ct (49), ag (52), ag (53), ag (65), ag (140), ag (147), ag (177), ag (191), ag (192), ag (193), ag (198), ag (199), ag (210), ag (213), ag (214), ag (257), ag (279), ag (280), ag (285), ag (293), ag (321), Editing mismatches: 20, all mismatches: 21, alignment length: 308, cluster length: 270, total number of As: 77 Locations in RNA: 52 53 65 140 147 177 191 192 193 198 199 210 213 214 257 279 280 285 293 321 Locations in genome: 68472458 68472459 68472471 68472546 68472553 68472583 68472597 68472598 68472599 68472604 68472605 68472616 68472619 68472620 68472663 68472685 68472686 68472691 68472699 68472727 Upstream nucleotide (in genome): a a t c a c a a a c a g c a c t a c c a Upstream nucleotide summary: a: 10, c: 7, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): a g c t t g a a g a g c a c g a t g g c Downstream nucleotide summary: a: 6, c: 4, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 3, at: 2, ca: 2, cc: 0, cg: 4, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr5:68472423-68472730 (+) tcctgacctcgtgatccgcccaccttggcctcccaaagtgctgggattacaggcgtgagccattgtgcccggcctaccctaggtcttaagaatagaactatgtagctgggtgcagtggcttacatctgtaatcccagcactttgggaggcagagttgggcagatcacgagctcaaaagttcaagaccagcctgaccaacatggtgaaaccctatctctactaaaaatacaaaaattagccaggtgtggcagtgcgcgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacct >DW412349:17-324 (+) tcctgacctcgtgatccgcccaccttggcctctcagggtgctgggattgcaggcgtgagccattgtgcccggcctaccctaggtcttaagaatagaactatgtagctgggtgcagtggcttacgtctgtagtcccagcactttgggaggcagagttgggcggatcacgagctcaggggttcgggaccagcctggccggcatggtgaaaccctatctctactaaaaatacaaaaattagccgggtgtggcagtgcgcgcctgtggtcccggctactcgggaggctgaggcaggagaatcacttgagcct End editing Edited EST: DW419635, type: ag Aligns to: chr5:125964161-125964450 (++) All mismatches: ag (14), ag (15), ag (16), ag (50), ag (51), ag (57), ag (103), gc (114), ag (128), ag (139), ag (142), ag (151), ag (157), ag (170), ag (189), ag (210), ag (224), ag (225), ag (287), Editing mismatches: 18, all mismatches: 19, alignment length: 290, cluster length: 274, total number of As: 74 Locations in RNA: 14 15 16 50 51 57 103 128 139 142 151 157 170 189 210 224 225 287 Locations in genome: 125964161 125964162 125964163 125964197 125964198 125964204 125964250 125964275 125964286 125964289 125964298 125964304 125964317 125964336 125964357 125964371 125964372 125964434 Upstream nucleotide (in genome): n a a t a a g a t t a c c c c g a g Upstream nucleotide summary: a: 7, c: 4, g: 3, t: 3, other: 1 Downstream nucleotide (in genome): a a a a t c g c c a a g g g g a c g Downstream nucleotide summary: a: 7, c: 4, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 0, at: 1, ca: 0, cc: 0, cg: 4, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 1 >chr5:125964161-125964450 (+) aaaatttatcggcccggcatggtggctcatacctgtaattctaacactgggaggccgaggcaggcggattgcctgagctcaggagttcgagaccagcctgggcaacacggtgaaaccccgtctatactaaaatacaaaaaatcagctgggcatggcagtgtgtgcctgtggtcccagctacttgagagcctgaggcaggagaattgcttgaacccgggagacggaggttgcagtgaacgaagatcatgcaactgcactccagactgggcacagagctagactccatctcc >DW419635:14-303 (+) gggatttatcggcccggcatggtggctcatacctgtggttctagcactgggaggccgaggcaggcggattgcctgagctcaggagttcgggaccagcctgcgcaacacggtgaagccccgtctatgctgaaatacaagaaatcggctgggcatggcggtgtgtgcctgtggtcccggctacttgagagcctgaggcgggagaattgcttgggcccgggagacggaggttgcagtgaacgaagatcatgcaactgcactccagactgggcacagggctagactccatctcc End editing Edited EST: DW426620, type: ag Aligns to: chr5:179137437-179137702 (++) All mismatches: ag (33), ag (68), ag (70), ag (71), ag (76), ag (102), ag (110), ag (127), ag (130), ct (131), ag (133), ag (135), ag (141), ag (161), ag (177), ag (205), ag (263), ag (270), ag (275), Editing mismatches: 18, all mismatches: 19, alignment length: 266, cluster length: 243, total number of As: 64 Locations in RNA: 33 68 70 71 76 102 110 127 130 133 135 141 161 177 205 263 270 275 Locations in genome: 179137454 179137489 179137491 179137492 179137497 179137523 179137531 179137548 179137551 179137554 179137556 179137562 179137582 179137598 179137626 179137684 179137691 179137696 Upstream nucleotide (in genome): a c c a c c a a t a a t c t c t c c Upstream nucleotide summary: a: 6, c: 8, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t c a g g t c a c a a g c c c g g a Downstream nucleotide summary: a: 5, c: 6, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 1, ca: 2, cc: 3, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 2, tt: 0, other: 0 >chr5:179137437-179137702 (+) ggtggctcacacctgtaatcccagcactttgggaggccgaggcgggtggatcacaaggtcaggagatcgagaccatcctggctaacatggtgaaaccccgtctctactaaaaatacaaaaatattagccgggcgtggtggtgggcacctgtagtcgcagctacttgggaggctgaggcaggagaatggcacgaacccgggaggcagagcttgcagtgagccgagatcgcgccactgcactccagcctaggagacagagcaagactc >DW426620:16-281 (+) ggtggctcacacctgtagtcccagcactttgggaggccgaggcgggtggatcgcggggtcgggagatcgagaccatcctggctaacgtggtgaagccccgtctctactaaagatgtagagatattggccgggcgtggtggtgggcgcctgtagtcgcagctgcttgggaggctgaggcaggagaatggcgcgaacccgggaggcagagcttgcagtgagccgagatcgcgccactgcactccagcctgggagacggagcgagactc End editing Edited EST: DW427465, type: ag Aligns to: chr5:24095842-24096104 (++) All mismatches: ag (37), ag (43), ag (74), ag (76), ag (82), ag (91), ag (92), ag (105), ag (110), ag (111), ag (127), ag (139), ag (144), ag (194), ag (197), Editing mismatches: 15, all mismatches: 15, alignment length: 263, cluster length: 161, total number of As: 51 Locations in RNA: 37 43 74 76 82 91 92 105 110 111 127 139 144 194 197 Locations in genome: 24095862 24095868 24095899 24095901 24095907 24095916 24095917 24095930 24095935 24095936 24095952 24095964 24095969 24096019 24096022 Upstream nucleotide (in genome): c g a a c t a t c a a t c t a Upstream nucleotide summary: a: 6, c: 4, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g g a c g a g c a g a g g c t Downstream nucleotide summary: a: 4, c: 3, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 2, at: 1, ca: 1, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr5:24095842-24096104 (+) cacatggtggcagaaagagcagaatgagagccaagcaaatggggtttcccccttataaaaccatcagatctcataagacttattcattaccacaagaactgtatgggggaaactgcccccgtagttcagttgtctcccactgggtccctcccacaacatgaggaaattatggaagctacaattcaagatgagatttgggtggggacacagccaaaccatatcatgtggtaaaacgtttcttcatatgtttgctcagtatctga >DW427465:17-279 (+) cacatggtggcagaaagagcggaatgggagccaagcaaatggggtttcccccttatagagccatcggatctcatgggacttattcattgccacgggaactgtatgggggagactgcccccgtggttcggttgtctcccactgggtccctcccacaacatgaggaaattatggaagctgcagttcaagatgagatttgggtggggacacagccaaaccatatcatgtggtaaaacgtttcttcatatgtttgctcagtatctga End editing Edited EST: DW440385, type: ag Aligns to: chr5:139881097-139881306 (++) All mismatches: ga (179), ag (183), ag (184), ag (192), ag (214), ga (215), ag (229), ag (233), ag (239), ag (250), ag (253), ag (256), ag (257), ag (259), ag (262), ag (270), ag (296), ag (297), ag (302), ag (306), ag (319), ag (323), ag (329), ag (336), ag (337), ag (341), ag (344), ag (348), Editing mismatches: 26, all mismatches: 28, alignment length: 210, cluster length: 166, total number of As: 54 Locations in RNA: 183 184 192 214 229 233 239 250 253 256 257 259 262 270 296 297 302 306 319 323 329 336 337 341 344 348 Locations in genome: 139881101 139881102 139881110 139881132 139881147 139881151 139881157 139881168 139881171 139881174 139881175 139881177 139881180 139881188 139881214 139881215 139881220 139881224 139881237 139881241 139881247 139881254 139881255 139881259 139881262 139881266 Upstream nucleotide (in genome): c a c g a c a t t a a t a t t a c t g c a g a c g c Upstream nucleotide summary: a: 9, c: 7, g: 4, t: 6, other: 0 Downstream nucleotide (in genome): a g g g c g c c a a t c a g a t g c g g t a c g g g Downstream nucleotide summary: a: 6, c: 6, g: 11, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 1, at: 3, ca: 1, cc: 0, cg: 6, ct: 0, ga: 1, gc: 0, gg: 3, gt: 0, ta: 2, tc: 3, tg: 1, tt: 0, other: 0 >chr5:139881097-139881306 (+) ggccaaggcgagcagatcatgaggttaggagatcgagaccatcctggctaacacagtgaaacctcatctctactaaaaatacaaaaaaattagccaggcatgctggcatgtgcctttaatcccagctactcgggaggctgaggcaggagaatccttgaacccaggaggcagaggttgcagtgagctgagatcatgccactgcactccagc >DW440385:179-388 (+) agccggggcgagcggatcatgaggttaggagatcggaaccatcctggctagcacggtgaagcctcatctctgctgaaggtgcagaaaaattggccaggcatgctggcatgtgcctttggtcccggctgctcgggaggctggggcgggagagtccttgggcccggggggcggaggttgcagtgagctgagatcatgccactgcactccagc End editing Edited EST: DW462540, type: ag Aligns to: chr5:70776667-70777016 (++) All mismatches: ag (16), tc (69), ag (103), ag (104), ag (119), ag (141), ag (149), ag (167), ag (169), ag (172), ag (173), ag (184), ag (190), ag (191), ag (199), ag (203), ag (229), ag (235), ag (271), ag (282), ag (332), ag (337), Editing mismatches: 21, all mismatches: 22, alignment length: 349, cluster length: 322, total number of As: 84 Locations in RNA: 16 103 104 119 141 149 167 169 172 173 184 190 191 199 203 229 235 271 282 332 337 Locations in genome: 70776667 70776754 70776755 70776770 70776792 70776800 70776818 70776820 70776823 70776824 70776835 70776841 70776842 70776850 70776854 70776880 70776886 70776922 70776933 70776983 70776988 Upstream nucleotide (in genome): n c a c c a c c a a t a a a t t c a c c c Upstream nucleotide summary: a: 8, c: 9, g: 0, t: 3, other: 1 Downstream nucleotide (in genome): a a c a g a c g a c c a t a g g g c g g a Downstream nucleotide summary: a: 8, c: 5, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 4, ac: 3, ag: 0, at: 1, ca: 3, cc: 1, cg: 5, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 1 >chr5:70776667-70777016 (+) aagaagtgaaccaccatgcccggccaaccgtgagtttttttgaaattgcatactaggccaggcgtagtggctcatgcctgtagtcccaacactttgggaggccaaggcgggtggatcacgaggtcaggagataaagaccatcctggctaacacagaaaccctgtctctactaaaaatgtgaaaaattagccaggcgtggtggcgtgcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcatgaacccgggatgcagaggttgcagtgagctgagatcgcgccactgcgctccagcctgtgagacagagcaagattccgtctcaaaaaaaaaaaatgaa >DW462540:16-364 (+) gagaagtgaaccaccatgcccggccaaccgtgagtttttttgaaattgcataccaggccaggcgtagtggctcatgcctgtagtcccggcactttgggaggccgaggcgggtggatcacgaggtcgggagatagagaccatcctggctaacgcggaggccctgtctctgctaaaggtgtgaaagattggccaggcgtggtggcgtgcgcctgtggtcccggctacttgggaggctgaggcaggagaatggcatgagcccgggatgcggaggttgcagtgagctgagatcgcgccactgcgctccagcctgtgagacggagcgagattccgtctcaaaaaaaaaaaa-gaa End editing Edited EST: DW463096, type: ag Aligns to: chr5:36968712-36969059 (++) All mismatches: ag (35), ag (48), ag (52), ag (53), ag (66), ag (72), ag (81), ag (82), ag (84), ag (90), ag (114), ag (122), ag (132), ag (138), ag (148), ag (152), ag (158), ac (330), Editing mismatches: 17, all mismatches: 18, alignment length: 348, cluster length: 124, total number of As: 46 Locations in RNA: 35 48 52 53 66 72 81 82 84 90 114 122 132 138 148 152 158 Locations in genome: 36968730 36968743 36968747 36968748 36968761 36968767 36968776 36968777 36968779 36968785 36968809 36968817 36968827 36968833 36968843 36968847 36968853 Upstream nucleotide (in genome): a c t a t t c a t a a g t t t a t Upstream nucleotide summary: a: 6, c: 2, g: 1, t: 8, other: 0 Downstream nucleotide (in genome): g c a g a g a t c g g g a c g a g Downstream nucleotide summary: a: 5, c: 3, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 4, at: 1, ca: 1, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 3, tc: 2, tg: 3, tt: 0, other: 0 >chr5:36968712-36969059 (+) cagctactcaagtggccaaggcaggaggatcacttaagcccaggagtttaagtctagcctgtgcaatacagcaagaccccatctgtatggaaaaaaaaggagaagaggttgatttaatgttacctagtggtagaaaaaattagaaacattttgtttcaattcaggaacaggccatgaatgcctataatgacatttatttagtgggtgtcccagccaatacaggaagataagaagcgttaaactatgtataattattggtaaggaagaaaaaagtgtcattttcaggtgacataattgtcttcatagaaaatccaagataagctacagacaagatactagaattaataa >DW463096:17-364 (+) cagctactcaagtggccagggcaggaggatcgcttgggcccaggagtttgagtctggcctgtgcggtgcagcaggaccccatctgtatggaaaaaaagggagaaggggttgatttgatgttgcctagtggtggaagaaattggaaacattttgtttcaattcaggaacaggccatgaatgcctataatgacatttatttagtgggtgtcccagccaatacaggaagataagaagcgttaaactatgtataattattggtaaggaagaaaaaagtgtcattttcaggtgacataattgtcttcatagaaaatcccagataagctacagacaagatactagaattaataa End editing Edited EST: DW466311, type: ag Aligns to: chr5:134000724-134001060 (++) All mismatches: ag (32), ag (41), ag (42), ag (56), ag (63), ag (176), ag (211), ag (219), ag (233), ag (240), ag (249), ag (250), ag (252), ag (274), ag (275), ag (278), ag (280), ag (285), ag (286), tc (288), ag (289), ag (321), Editing mismatches: 21, all mismatches: 22, alignment length: 337, cluster length: 290, total number of As: 78 Locations in RNA: 32 41 42 56 63 176 211 219 233 240 249 250 252 274 275 278 280 285 286 289 321 Locations in genome: 134000740 134000749 134000750 134000764 134000771 134000884 134000919 134000927 134000941 134000948 134000957 134000958 134000960 134000982 134000983 134000986 134000988 134000993 134000994 134000997 134001029 Upstream nucleotide (in genome): c a a c g a t c c c c a t t a a t a a t c Upstream nucleotide summary: a: 8, c: 7, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g a g g g t c g g g a t t a a t c a t g g Downstream nucleotide summary: a: 5, c: 2, g: 9, t: 5, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 1, at: 4, ca: 1, cc: 0, cg: 6, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 1, tt: 1, other: 0 >chr5:134000724-134001060 (+) gtgatccacctgtctcagcctcccaaagtgctgggattacaggcgtgagccactgcacccagcctaataggcaatttttcaacttgatactggagtatttaacagtattggtgaaacattttgaaaaatttcaggctgagcgtggtggctcacgactgtaattccagcactttgagaggccgaggcgggtggattacgaggtcaggagtttgagatcagcctccagcctggccaatatggtgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcgcgcacttgtggacccagctgctgccggaggctgaggcaggagaatcg >DW466311:16-352 (+) gtgatccacctgtctcggcctcccagggtgctgggattacgggcgtgggccactgcacccagcctaataggcaatttttcaacttgatactggagtatttaacagtattggtgaaacattttgaaaaatttcaggctgagcgtggtggctcacgactgtagttccagcactttgagaggccgaggcgggtggattgcgaggtcgggagtttgagatcggcctccggcctggccggtgtggtgaaaccccatctctactggaagtgcaaaggtcggccgggcgtggtggcgcgcacttgtggacccggctgctgccggaggctgaggcaggagaatcg End editing Edited EST: CF454948, type: ag Aligns to: chr5:150651097-150651804 (++) All mismatches: ag (256), ag (259), ag (271), ag (287), ag (296), ag (333), ag (341), ag (342), ag (357), ag (362), ag (382), ag (383), ag (384), ag (387), ag (392), ag (397), ag (401), ag (424), ag (429), ag (433), ag (456), ag (464), ag (503), ag (525), ag (538), Editing mismatches: 25, all mismatches: 25, alignment length: 711, cluster length: 283, total number of As: 66 Locations in RNA: 256 259 271 287 296 333 341 342 357 362 382 383 384 387 392 397 401 424 429 433 456 464 503 525 538 Locations in genome: 150651349 150651352 150651364 150651380 150651389 150651426 150651434 150651435 150651450 150651455 150651475 150651476 150651477 150651480 150651485 150651490 150651494 150651517 150651522 150651526 150651549 150651557 150651596 150651618 150651631 Upstream nucleotide (in genome): a a c t c c c a a g a a a t a t c a c t a g c c c Upstream nucleotide summary: a: 10, c: 9, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): a t g g c g a g c t a a a c a g g t g c t a c g t Downstream nucleotide summary: a: 7, c: 5, g: 8, t: 5, other: 0 Dinucleotide summary: aa: 5, ac: 1, ag: 1, at: 3, ca: 1, cc: 2, cg: 5, ct: 1, ga: 1, gc: 0, gg: 0, gt: 1, ta: 0, tc: 2, tg: 2, tt: 0, other: 0 >chr5:150651097-150651804 (+) agttagtaattcaggaagtatttta-tgtgtgtatta-g-gatggggaaaacaaatatatggtaggtaatgagaacatgggggacatattgaaaggacacaggaaccaaattgaatgtccctcagtggccaaatcttgggcaatttgagcaataaaataatgacaataatgggttatagtccactgactaaaaatacactatagaatcccatacacaatggaatcacaaatgtagaaggaacgatagaaatagaaaaaatggctgggtgcagtggctcacgcctgtagtcccagcactttgggaggccaaggcgggtggatcatctggggtcaggagttcaagaccagcctggccaacatgatgaaaccctgtctctactaaaaatacacaaagttagccaggcgtggtggcacgtgcctgtaatcccagctactccggaggctgaggcaggagaatcgcttgaactgggaggtggaggttgcagtgatctgggactgtgccactgccctctagcctgggtgacagagtgagactccatctcaaacccacaaacaaaaaaacaccattaggcaaacaccataggaatagttgttgcagacaagaaacacctatgaatgccgaattagtgaacagaagtatgatgggaaacacgattttgcatggttttaagatcccttcacaagatactaattacaaagggaaaaacagtc >CF454948:1-711 (+) agttagtaattcaggaagtattttantgtgtgtattatgtgatggggaaaacaaatatatggtaggtaatgagaacatgggggacatattgaaaggacacaggaaccaaattgaatgtccctcagtggccaaatcttgggcaatttgagcaataaaataatgacaataatgggttatagtccactgactaaaaatacactatagaatcccatacacaatggaatcacaaatgtagaaggaacgatagaaatagaagaagtggctgggtgcggtggctcacgcctgtggtcccagcgctttgggaggccaaggcgggtggatcatctggggtcgggagttcgggaccagcctggccagcatggtgaaaccctgtctctactagggatgcacagagttggccgggcgtggtggcacgtgcctgtagtcccggctgctccggaggctgaggcaggagagtcgcttggactgggaggtggaggttgcagtgatctgggactgtgccgctgccctctagcctgggtgacggagtgagactccgtctcaaacccacaaacaaaaaaacaccattaggcaaacaccataggaatagttgttgcagacaagaaacacctatgaatgccgaattagtgaacagaagtatgatgggaaacacgattttgcatggttttaagatcccttcacaagatactaattacaaagggaaaaacagtc End editing Edited EST: CN263691, type: ag Aligns to: chr6:56920790-56921236 (++) All mismatches: ag (1), ag (2), ag (40), ag (121), tc (150), ag (210), ag (256), ag (270), ag (280), ag (281), ag (303), ag (320), ag (342), ag (343), ag (346), ag (356), ag (369), Editing mismatches: 16, all mismatches: 17, alignment length: 449, cluster length: 368, total number of As: 79 Locations in RNA: 1 2 40 121 210 256 270 280 281 303 320 342 343 346 356 369 Locations in genome: 56920790 56920791 56920829 56920910 56920999 56921044 56921058 56921068 56921069 56921091 56921108 56921130 56921131 56921134 56921144 56921157 Upstream nucleotide (in genome): n a c c c c t c a c c c a t t c Upstream nucleotide summary: a: 3, c: 9, g: 0, t: 3, other: 1 Downstream nucleotide (in genome): a a g a c c c a t c g a g g c c Downstream nucleotide summary: a: 5, c: 6, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 1, ca: 3, cc: 4, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 1, tt: 0, other: 1 >chr6:56920790-56921236 (+) aaaacaattttagaaggaactaaggttgtaagtttggccagatgtgaaatagctgagattctttttttttttcccgagacagagtcttgtggtgtcacccaggctggagtgcaatggcgcaatcttggctcactgcaacctccacttcctgggttcaagtgattctcctgcctcagcctcccgagtagctaggattacaggagtgtgccacgacgcctgcctaa-ttttttttttttgagacagagtcttgtgtcacccaggctggagtacagtggtgcaatctcggctcactgcaacttccaccttctgggttcaagcagttctcctgcctcagcctcccaagtagctgggattacaggtgtctgccaccatgcccagctaattttttt-gtattttttatagagacggggttccaccttgttggccaggctggtctcaaactcctga >CN263691:1-449 (+) ggaacaattttagaaggaactaaggttgtaagtttggccggatgtgaaatagctgagattctttttttttttcccgagacagagtcttgtggtgtcacccaggctggagtgcaatggcgcgatcttggctcactgcaacctccacttcccgggttcaagtgattctcctgcctcagcctcccgagtagctaggattacaggagtgtgccgcgacgcctgcctaatttttttttttttgagacagagtcttgtgtcgcccaggctggagtgcagtggtgcggtctcggctcactgcaacttccgccttctgggttcaagcggttctcctgcctcagcctcccgggtggctgggattgcaggtgtctgccgccatgcccagctaattttttttgtattttttatagagacggggttccaccttgttggccaggctggtctcaaactcctga End editing Edited EST: DA094160, type: ag Aligns to: chr6:3021093-3021645 (++) All mismatches: ag (148), ag (161), ag (177), ag (185), cg (186), ag (193), ag (200), ag (229), ag (230), ag (233), ag (239), ag (245), ag (247), ag (265), ag (288), ag (290), ag (301), ag (311), ag (335), ag (339), ag (344), ag (363), ag (375), ag (400), Editing mismatches: 23, all mismatches: 24, alignment length: 553, cluster length: 253, total number of As: 57 Locations in RNA: 148 161 177 185 193 200 229 230 233 239 245 247 265 288 290 301 311 335 339 344 363 375 400 Locations in genome: 3021240 3021253 3021269 3021277 3021285 3021292 3021321 3021322 3021325 3021331 3021337 3021339 3021357 3021380 3021382 3021393 3021403 3021427 3021431 3021436 3021455 3021467 3021492 Upstream nucleotide (in genome): c c c t t a t a t t c c t g c t a c c c a t g Upstream nucleotide summary: a: 4, c: 9, g: 2, t: 8, other: 0 Downstream nucleotide (in genome): c g t c g g a c g c c t a c g t g a g c g c c Downstream nucleotide summary: a: 3, c: 9, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 3, at: 0, ca: 1, cc: 3, cg: 3, ct: 2, ga: 0, gc: 2, gg: 0, gt: 0, ta: 2, tc: 3, tg: 2, tt: 1, other: 0 >chr6:3021093-3021645 (+) cattaacatatatggttatatgttgcatgatgtttcaatcagtgatggactgcatgtacgatggtggtcccctaagattataatgccatgttttgtttattaaaatttatttaagatttattttattatttttatagatgaggtctcactctgttgccccagctgggtgcagtggcatgatcatacctcactaggctcaagtgatcctcctgcctcagcatccctagtaactaggactacaggcacatgctaccacgcctggctaattattttaatttttggtagagacaggatctcattatgttgcccaagctggtcttgaactcctggtctcaagcagtccacccacctcagcttccccaagtgctgagattacaggcatgagctgcctgcacctggactaatacagtaattttactgtaccttttccatgtttagatacagagatacctattattgtgttacagttgcctacagtattcagtacagtaacatctctacaggtttatagccaagggcaataggctctaccataaagcctgggtgtgtagta >DA094160:1-553 (+) cattaacatatatggttatatgttgcatgatgtttcaatcagtgatggactgcatgtacgatggtggtcccctaagattataatgccatgttttgtttattaaaatttatttaagatttattttattatttttatagatgaggtctcgctctgttgccccggctgggtgcagtggcgtgatcatggctcactgggctcaggtgatcctcctgcctcagcatccctagtggctgggactgcaggcgcgtgctaccacgcctggctgattattttaatttttggtagaggcgggatctcattgtgttgcccaggctggtcttgaactcctggtctcgagcggtccgcccacctcagcttccccaggtgctgagattgcaggcatgagctgcctgcacctgggctaatacagtaattttactgtaccttttccatgtttagatacagagatacctattattgtgttacagttgcctacagtattcagtacagtaacatctctacaggtttatagccaagggcaataggctctaccataaagcctgggtgtgtagta End editing Edited EST: DA151356, type: ag Aligns to: chr6:42655289-42655859 (++) All mismatches: ag (46), ag (120), ag (130), ag (143), ag (156), ag (157), ag (171), ag (174), ag (188), ag (193), ag (200), ag (253), ag (265), ga (547), Editing mismatches: 13, all mismatches: 14, alignment length: 573, cluster length: 220, total number of As: 47 Locations in RNA: 46 120 130 143 156 157 171 174 188 193 200 253 265 Locations in genome: 42655334 42655408 42655418 42655431 42655444 42655445 42655459 42655462 42655476 42655481 42655488 42655541 42655553 Upstream nucleotide (in genome): c t t c t a t t c t c a t Upstream nucleotide summary: a: 2, c: 4, g: 0, t: 7, other: 0 Downstream nucleotide (in genome): g g c c a t g g c t g g c Downstream nucleotide summary: a: 1, c: 4, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 0, cc: 2, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 3, tt: 1, other: 0 >chr6:42655289-42655859 (+) tatttattgagacagggtctcactctgttgcccaggctggagtgcagtggtgtgatcttggctcacagcaacctccgcctcccaggttcaagtgattctccagtctcagcctccaaagtagctgggactacaggtgcacaccaccatgcctggctaatttttgtatttttagtagagacggggtttcaccatattggtcaggctggtctcaaactcctgacctcagttgatccacccacctttgcctcccaaagtgctgggattacaggcgtgagccactgcacccagccaattttgcattcattcagcattgtttctaagatttatctgtattgacgtttataactttattgattttt-cattgctccatagtattttattatatggcagtggtacc-gtttatctttttctcctattgatgattttatttatttttttttctccagttactgattctttt-gagtgtttccagtacatggtctttgtatatatgtgcaagatgtttcctattccagattctaggaataaacttgcatagactgtaggatatacacttctttggctttacttg >DA151356:1-573 (+) tatttattgagacagggtctcactctgttgcccaggctggagtgcggtggtgtgatcttggctcacagcaacctccgcctcccaggttcaagtgattctccagtctcagcctccaaagtggctgggactgcaggtgcacaccgccatgcctggctggtttttgtatttttggtggagacggggtttcgccatgttggtcgggctggtctcaaactcctgacctcagttgatccacccacctttgcctcccaaggtgctgggattgcaggcgtgagccactgcacccagccaattttgcattcattcagcattgtttctaagatttatctgtattgacgtttataactttattgattttttcattgctccatagtattttattatatggcagtggtacccgtttatctttttctcctattgatgattttatttatttttttt-ctccagttactgattctttttgagtgtttccagtacatggtctttgtatatatgtgcaagatgtttcctattccagattctaggaataaacttgcatagactgtaagatatacacttctttggctttacttg End editing Edited EST: DW414066, type: ag Aligns to: chr6:109186948-109187189 (++) All mismatches: gt (79), ag (81), ag (86), ag (94), ag (95), ag (116), ag (121), ag (167), ag (190), ag (197), ag (198), ag (227), ag (233), ag (237), ag (241), ag (250), Editing mismatches: 15, all mismatches: 16, alignment length: 242, cluster length: 170, total number of As: 44 Locations in RNA: 81 86 94 95 116 121 167 190 197 198 227 233 237 241 250 Locations in genome: 109186953 109186958 109186966 109186967 109186988 109186993 109187039 109187062 109187069 109187070 109187099 109187105 109187109 109187113 109187122 Upstream nucleotide (in genome): t c t a c c t a a a t c t c g Upstream nucleotide summary: a: 4, c: 5, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g t a t a g g a a t g g c g g Downstream nucleotide summary: a: 4, c: 1, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 2, ca: 1, cc: 0, cg: 3, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 3, tt: 0, other: 0 >chr6:109186948-109187189 (+) gtggtagctcatgcctgtaattccagcactttgggaggccaaggcaggagagcttttgagctcaggagtttgagaccagcctgggccacatagggagaccctgtctctacaaaaaataaaaaattagctgggtgtggtggtgcatgcttgtagtcccagctactcaggaggctgaggctggagaattgcatgagaccaggaagtcaaggctgtggtgagccatgatcgtaccactgcactcc >DW414066:76-317 (+) gtgttggctcgtgcctgtggttccagcactttgggaggccgaggcgggagagcttttgagctcaggagtttgagaccagcctgggccacatggggagaccctgtctctacaaaagataaaaggttagctgggtgtggtggtgcatgcttgtggtcccggctgctcgggaggctggggctggagaattgcatgagaccaggaagtcaaggctgtggtgagccatgatcgtaccactgcactcc End editing Edited EST: DW420534, type: ag Aligns to: chr6:10788703-10788986 (++) All mismatches: ag (24), ag (30), ag (32), ag (40), ag (46), ag (50), ag (69), ag (77), ag (78), ag (92), ag (93), ag (95), ag (102), ag (103), ag (123), ag (126), ag (127), ag (129), ag (130), ag (133), ag (137), ag (149), ag (159), ag (162), ag (163), ag (168), ag (172), ag (175), ag (176), ag (187), ag (189), ag (203), ag (204), ag (215), ag (224), ag (228), ag (238), ag (240), ga (259), ag (286), at (287), ga (288), ga (297), Editing mismatches: 39, all mismatches: 43, alignment length: 284, cluster length: 263, total number of As: 80 Locations in RNA: 24 30 32 40 46 50 69 77 78 92 93 95 102 103 123 126 127 129 130 133 137 149 159 162 163 168 172 175 176 187 189 203 204 215 224 228 238 240 286 Locations in genome: 10788710 10788716 10788718 10788726 10788732 10788736 10788755 10788763 10788764 10788778 10788779 10788781 10788788 10788789 10788809 10788812 10788813 10788815 10788816 10788819 10788823 10788835 10788845 10788848 10788849 10788854 10788858 10788861 10788862 10788873 10788875 10788889 10788890 10788901 10788910 10788914 10788924 10788926 10788972 Upstream nucleotide (in genome): a a c g g c c c a c a c a a t a a a a t c c t c a g t t a g c g a c c g c c a Upstream nucleotide summary: a: 14, c: 14, g: 6, t: 5, other: 0 Downstream nucleotide (in genome): t c c g g g g a g a c t a c c a a a t g g c a a t g c a g c g a c g g g c t a Downstream nucleotide summary: a: 11, c: 10, g: 13, t: 5, other: 0 Dinucleotide summary: aa: 5, ac: 4, ag: 2, at: 3, ca: 3, cc: 3, cg: 6, ct: 2, ga: 1, gc: 1, gg: 4, gt: 0, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr6:10788703-10788986 (+) gcctgtaatcccaacacttttggaggccgaggcaggtggatcacctgaggtcaggagttcaagactagcctggccaacatggtgaaacactgtctctattaaaaatacaaaaaattagccaggcgtggtggcacacgcctgtaacaatctgagctactaaggagactgagacaggagaattgcttgaaccctggaggcagaggttgcagtgagccgagatcacatcactgcactccagcctgggcaatgaagcgacattccgtctcaaaaagaaaaaaaagaaa >DW420534:17-300 (+) gcctgtagtcccagcgcttttgggggccggggcgggtggatcacctgaggtcgggagttcgggactagcctggccggcgtggtgaggcactgtctctattaaaaatgcaggaggttggccgggcgtggtggcgcacgcctgtgacggtctgggctgctggggagactgaggcgggagaattgcttgggccctggaggcggaggttgcggtgggccgagatcgcgtcactgcactccagcctgagcaatgaagcgacattccgtctcaaagtaaaaaaaaaaaaa End editing Edited EST: DW422060, type: ag Aligns to: chr6:27785645-27785923 (++) All mismatches: ag (36), ag (48), ag (81), ag (82), ag (84), ag (85), ag (120), ag (122), ag (126), ag (206), ag (219), ag (245), Editing mismatches: 12, all mismatches: 12, alignment length: 279, cluster length: 210, total number of As: 40 Locations in RNA: 36 48 81 82 84 85 120 122 126 206 219 245 Locations in genome: 27785664 27785676 27785709 27785710 27785712 27785713 27785748 27785750 27785754 27785834 27785847 27785873 Upstream nucleotide (in genome): c c a a c a t c c a a a Upstream nucleotide summary: a: 6, c: 5, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): g t a c a t c g c c g a Downstream nucleotide summary: a: 3, c: 4, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 1, at: 1, ca: 1, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr6:27785645-27785923 (+) gttgcccaggctggagtgcagtggcacaatcatggctcactgcaccttggcttccccaagctcaaacaatcctcccacctcagcctcctgggttgctgggactacaggcacaggccaccaccctgggctaatctttgtatcttttttggtggagacagtgtttcaccatgttgcctaggctgttctcaaacttctgtgctcaagtgatcctcctgccttggccttccaaaatgttggaattacaggtgtgagccactgtgccctgcccctatttttaat >DW422060:17-295 (+) gttgcccaggctggagtgcggtggcacaatcgtggctcactgcaccttggcttccccaagctcaggcggtcctcccacctcagcctcctgggttgctgggactgcgggcgcaggccaccaccctgggctaatctttgtatcttttttggtggagacagtgtttcaccatgttgcctaggctgttctcaagcttctgtgctcaggtgatcctcctgccttggccttccagaatgttggaattacaggtgtgagccactgtgccctgcccctatttttaat End editing Edited EST: DW428186, type: ag Aligns to: chr6:25572671-25572928 (++) All mismatches: ag (33), ag (41), ag (46), ag (69), gc (75), ag (92), ag (96), ag (110), ag (113), ag (114), ag (115), ag (123), ag (128), ag (144), ag (154), ag (168), ag (177), ag (178), ag (185), ag (194), ag (195), tc (230), ag (252), Editing mismatches: 21, all mismatches: 23, alignment length: 258, cluster length: 220, total number of As: 67 Locations in RNA: 33 41 46 69 92 96 110 113 114 115 123 128 144 154 168 177 178 185 194 195 252 Locations in genome: 25572687 25572695 25572700 25572723 25572746 25572750 25572764 25572767 25572768 25572769 25572777 25572782 25572798 25572808 25572822 25572831 25572832 25572839 25572848 25572849 25572906 Upstream nucleotide (in genome): t c c a a c t a a a a t t t c g a a t a t Upstream nucleotide summary: a: 9, c: 4, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): g a g t g a c a a a g a c g g a g g a g g Downstream nucleotide summary: a: 8, c: 2, g: 10, t: 1, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 5, at: 1, ca: 2, cc: 0, cg: 2, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 2, tc: 2, tg: 3, tt: 0, other: 0 >chr6:25572671-25572928 (+) gtaatcccagcactttagggggccaaggcaggaggattgcttgagctcaggaattggagaccagcctgggcaacaaggcaaaaccccgtctctacaaaaaatacaaaggttaaccaggcatggtggtacgtatctgtagtcccagctactcaggaggctgaagtgggaagatggcttaagcccaggaggcagaggttggacaatgagccaagattgagccactgcacttcagactaggtgatagagccagaccttgtc >DW428186:17-274 (+) gtaatcccagcactttggggggccgaggcgggaggattgcttgagctcaggagttggacaccagcctgggcaacagggcgaaaccccgtctctgcagggaatacaagggttgaccaggcatggtggtgcgtatctgtggtcccagctactcgggaggctggggtgggaggatggcttgggcccaggaggcagaggttggacaatgagccaagactgagccactgcacttcagactgggtgatagagccagaccttgtc End editing Edited EST: DW430417, type: ag Aligns to: chr6:88367920-88368172 (++) All mismatches: ag (17), ag (18), ag (53), ag (56), ag (61), ag (84), ag (87), ag (88), ag (93), ag (94), ag (95), ag (125), ag (151), ag (157), ag (161), ag (174), ag (178), ag (197), ag (217), ag (222), Editing mismatches: 20, all mismatches: 20, alignment length: 253, cluster length: 206, total number of As: 55 Locations in RNA: 17 18 53 56 61 84 87 88 93 94 95 125 151 157 161 174 178 197 217 222 Locations in genome: 88367920 88367921 88367956 88367959 88367964 88367987 88367990 88367991 88367996 88367997 88367998 88368028 88368054 88368060 88368064 88368077 88368081 88368100 88368120 88368125 Upstream nucleotide (in genome): n a c g c t c a g a a t t c t g c c g a Upstream nucleotide summary: a: 5, c: 6, g: 4, t: 4, other: 1 Downstream nucleotide (in genome): a t c g g a a g a a c g g g c g g g g g Downstream nucleotide summary: a: 5, c: 3, g: 11, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 1, ca: 1, cc: 1, cg: 4, ct: 0, ga: 1, gc: 0, gg: 3, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 1 >chr6:88367920-88368172 (+) aatcccagcactttgggaggccaaggctggtggatcacgaggtcaggagatcgagaccatcctggctaacaaggtgaaaccctgtctctactgaaagtacaaaaaattagctgggtgtggtggtgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacccaggaggcggagcttgcagtgagccaagatcgtgccactgcactccagcctgggcaacggtgcaagactccgtc >DW430417:17-269 (+) ggtcccagcactttgggaggccaaggctggtggatcgcggggtcgggagatcgagaccatcctggctgacggggtggggccctgtctctactgaaagtacaaaaaattggctgggtgtggtggtgggcacctgtggtcccggctgctcgggaggctggggcgggagaatggcatgaacccgggaggcggagcttgcagtgggccaggatcgtgccactgcactccagcctgggcaacggtgcaagactccgtc End editing Edited EST: DW434441, type: ag Aligns to: chr6:76403776-76403985 (++) All mismatches: ag (10), ag (15), ag (20), ag (24), ag (28), ag (51), ag (56), ag (80), ag (82), ag (83), ag (88), ag (89), ag (93), ag (96), ag (109), ag (110), ag (123), ag (138), ag (186), ag (197), tc (207), Editing mismatches: 20, all mismatches: 21, alignment length: 208, cluster length: 190, total number of As: 57 Locations in RNA: 10 15 20 24 28 51 56 80 82 83 88 89 93 96 109 110 123 138 186 197 Locations in genome: 76403777 76403783 76403789 76403793 76403797 76403820 76403825 76403849 76403851 76403852 76403857 76403858 76403862 76403865 76403878 76403879 76403892 76403907 76403955 76403966 Upstream nucleotide (in genome): c g c g a a t t t a c a a c c a g a c a Upstream nucleotide summary: a: 8, c: 6, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): g g t g c a g t a t a c t g a g a g a a Downstream nucleotide summary: a: 7, c: 2, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 2, at: 2, ca: 3, cc: 0, cg: 2, ct: 1, ga: 1, gc: 0, gg: 2, gt: 0, ta: 1, tc: 0, tg: 1, tt: 1, other: 0 >chr6:76403776-76403985 (+) cagcctgagcaacatggagaaaccccgtctctactaaaaatacaaaattagcctggcatggtggtccatgcctataatcccaactaatcaggaggctgaggcaagagaatcgcttgaacccgggaggtggaagttgtggtgagccgagatcatgccattgcactccagcctgcctgggcaacaagagtgaaactcttatctcaaaaaaaa >DW434441:9-216 (+) cggcc-ggg-aacgtggggaagccccgtctctactaaaaatacagaattggcctggcatggtggtccatgcctgtggtcccggctagtcgggaggctgaggcgggagaatcgcttggacccgggaggtggaggttgtggtgagccgagatcatgccattgcactccagcctgcctgggcgacaagagtgagactcttatcccaaaaaaaa End editing Edited EST: DW436702, type: ag Aligns to: chr6:26376202-26376438 (++) All mismatches: ag (14), ag (17), ag (29), ag (68), ag (69), ag (89), ag (93), ag (101), ag (103), ag (106), ag (132), ag (170), ag (181), ag (185), ag (194), ct (214), Editing mismatches: 15, all mismatches: 16, alignment length: 237, cluster length: 181, total number of As: 59 Locations in RNA: 14 17 29 68 69 89 93 101 103 106 132 170 181 185 194 Locations in genome: 26376202 26376205 26376217 26376256 26376257 26376277 26376281 26376289 26376291 26376294 26376320 26376358 26376369 26376373 26376382 Upstream nucleotide (in genome): n g c a a t a a a t t c a c c Upstream nucleotide summary: a: 6, c: 4, g: 1, t: 3, other: 1 Downstream nucleotide (in genome): g g a a c c a a t g g t g g g Downstream nucleotide summary: a: 4, c: 2, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 1, ca: 1, cc: 0, cg: 2, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 1 >chr6:26376202-26376438 (+) aggagggcggatcacaaggtcaggagatcaagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaataaaaaattagccgggcatggtgacgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacccggaaggcagagcttgcagtgagccgagatcacgccactgcactccagcctgggagacagagcgagactctgtc >DW436702:14-250 (+) gggggggcggatcacgaggtcaggagatcaagaccatcctggctaacacggtgaggccccgtctctactaaaaatgcaagaaataaagagttggccgggcatggtgacgggcacctgtggtcccagctactcgggaggctgaggcaggagaatggcgtgaacccggagggcggagcttgcggtgagccgagatcacgccattgcactccagcctgggagacagagcgagactctgtc End editing Edited EST: DW466179, type: ag Aligns to: chr6:31800294-31800630 (++) All mismatches: ag (39), ag (44), ta (55), ag (60), ag (73), ag (83), ag (88), ag (101), ag (103), ag (111), ag (129), ag (137), ag (138), ag (143), ag (147), ag (164), ag (178), ag (179), ag (186), ag (203), ag (210), ag (223), ag (238), ag (240), ag (241), ag (248), ag (249), ag (259), ag (275), ag (279), ag (334), Editing mismatches: 30, all mismatches: 31, alignment length: 337, cluster length: 296, total number of As: 98 Locations in RNA: 39 44 60 73 83 88 101 103 111 129 137 138 143 147 164 178 179 186 203 210 223 238 240 241 248 249 259 275 279 334 Locations in genome: 31800316 31800321 31800337 31800350 31800360 31800365 31800378 31800380 31800388 31800406 31800414 31800415 31800420 31800424 31800441 31800455 31800456 31800463 31800480 31800487 31800500 31800515 31800517 31800518 31800525 31800526 31800536 31800552 31800556 31800611 Upstream nucleotide (in genome): c g g a a c a t t c t a c t c g a g g g c a c a a a c a a a Upstream nucleotide summary: a: 12, c: 8, g: 6, t: 4, other: 0 Downstream nucleotide (in genome): c g c c c t t c g t a t g c g a c g g t c c a g a c a a a a Downstream nucleotide summary: a: 8, c: 10, g: 7, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 5, ag: 1, at: 2, ca: 2, cc: 2, cg: 2, ct: 2, ga: 1, gc: 1, gg: 3, gt: 1, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr6:31800294-31800630 (+) gggaggccgaggcgggcggatcacctgaggtctggagttcgagaccagcctgaccaacatggagaaaccccatctctactaaaaatacaaaattagccgggtgtggtggcgcatgcctgtaatcccagctaccctggaggctgaggcaggagaatggcttgaacctgggaggcggaggttgctgtgagccgagatcgcgccattgcactccagcctgggcaacaagagcgaaactctgtctcaaaaaaaaaaaaaaaaaaaaaaagaggaactaaagcctctgaccatagcacttagtaaaggcagcttaactgccaaaacagcaggaattagggct >DW466179:17-353 (+) gggaggccgaggcgggcggatcgcctggggtctggagtacgaggccagcctgaccagcatggagaagccccgtctctactaaaagtgcaaaattggccgggtgtggtggcgcgtgcctgtggtcccggctgccctggaggctgaggcgggagaatggcttgggcctggggggcggaggttgctgtgggccgaggtcgcgccattgcgctccagcctgggcagcgggagcgaggctctgtctcgaaaaaaaaaaaaaaagaaagaagaggaactaaagcctctgaccatagcacttagtaaaggcagcttaactgccagaacagcaggaattagggct End editing Edited EST: BM706967, type: ag Aligns to: chr6:83111090-83111377 (++) All mismatches: ag (2), ag (24), ag (55), ag (68), ag (149), ag (155), ag (159), ag (163), ag (176), ag (190), ag (191), ag (215), ag (220), ag (230), ag (235), Editing mismatches: 15, all mismatches: 15, alignment length: 288, cluster length: 234, total number of As: 65 Locations in RNA: 2 24 55 68 149 155 159 163 176 190 191 215 220 230 235 Locations in genome: 83111091 83111113 83111144 83111157 83111238 83111244 83111248 83111252 83111265 83111279 83111280 83111304 83111309 83111319 83111324 Upstream nucleotide (in genome): c t c c t c t c c g a g g t c Upstream nucleotide summary: a: 1, c: 7, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): g a g g a g c g g a c g g c c Downstream nucleotide summary: a: 3, c: 4, g: 8, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 0, ca: 0, cc: 1, cg: 6, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 2, tc: 2, tg: 0, tt: 0, other: 0 >chr6:83111090-83111377 (+) caggcgcattggctcactcctgtaatcccagcactttgggaggacgaggcaggcagatcacaaggtcaggagtttgagaccagcttgaacaacatggtgaaaccccatatctactaaaaatacaaaaattagctgggtgtgtgcctgtaatcccagctacccaggaggctgaggcaggaggattgcttgaacctgggaggtggaggttgcagtgagctgagattgcactactgcactccagcctgggtgacagagatagactccgtctccaaaaaaaaaaaaaaaaaa >BM706967:1-288 (+) cgggcgcattggctcactcctgtgatcccagcactttgggaggacgaggcaggcggatcacaaggtcgggagtttgagaccagcttgaacaacatggtgaaaccccatatctactaaaaatacaaaaattagctgggtgtgtgcctgtgatcccggctgcccgggaggctgaggcgggaggattgcttgggcctgggaggtggaggttgcagtgggctgggattgcactgctgcgctccagcctgggtgacagagatagactccgtctccaaaaaaaaaaaaaaaaaa End editing Edited EST: BX484140, type: ag Aligns to: chr6:150043124-150043621 (++) All mismatches: ag (1), cg (4), ag (6), ag (9), ag (14), ag (22), ag (54), ag (60), ag (61), ag (64), ag (65), cg (80), ag (87), ag (90), ag (102), ag (343), ag (344), ag (381), ag (444), ag (447), ag (489), Editing mismatches: 19, all mismatches: 21, alignment length: 496, cluster length: 491, total number of As: 89 Locations in RNA: 1 6 9 14 22 54 60 61 64 65 87 90 102 343 344 381 444 447 489 Locations in genome: 150043124 150043129 150043132 150043137 150043145 150043177 150043183 150043184 150043187 150043188 150043210 150043213 150043225 150043468 150043469 150043506 150043569 150043572 150043614 Upstream nucleotide (in genome): n t a a a c c a c a a t c c a c t t c Upstream nucleotide summary: a: 7, c: 7, g: 0, t: 4, other: 1 Downstream nucleotide (in genome): g g t t t g a g a t g g g a c g g g g Downstream nucleotide summary: a: 3, c: 1, g: 11, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 4, ca: 3, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 4, tt: 0, other: 1 >chr6:150043124-150043621 (+) aggctagaatgcaatggtgcaatctcggctcactcactgcacctctgcctcccaggctcaagcaatcctcctggctcagcctcccaagtagctgggattacaggcatgtgccaatatgcctggctaattttctttttttttttttttagtagagatggggtttcaccatgttggtcaggctggtctcgaacttcccaccccaggtgatccgcctgcctccgcctcccaaagtgctggaattacaggtgtgagccaccgtgcccagccccattttttctttttttgagatggagtcttgctgtgttgccaggctggagtgcagtggcacgatctccgctcactgcaacctctgcctcctgggttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggtgcctgccaccaggccaggctaatttttgtgtttttagtagagacggggtttcaccatgttggtcttgaacacctgatctcaggtgatc >BX484140:1-496 (+) ggggtggagtgcagtggtgcagtctcggctcactcactgcacctctgcctcccgggctcgggcggtcctcctggctcaggctcccaggtggctgggattacgggcatgtgccaatatgcctggctaattttc--tttttttttttttagtagagatggggtttcaccatgttggtcaggctggtctcgaacttcccaccccaggtgatccgcctgcctccgcctcccaaagtgctggaattacaggtgtgagccaccgtgcccagccccattttttctttttttgagatggagtcttgctgtgttgccaggctggagtgcagtggcacgatctccgctcactgcggcctctgcctcctgggttcaagcaattctcctgcctcggcctcctgagtagctgggactacaggtgcctgccaccaggccaggctaatttttgtgtttttggtggagacggggtttcaccatgttggtcttgaacacctgatctcgggtgatc End editing Edited EST: BG429737, type: ag Aligns to: chr6:111291198-111291573 (++) All mismatches: ag (131), ag (153), ag (154), ag (176), ag (184), ag (191), ag (192), ag (197), ag (220), ag (221), ag (231), ag (236), ag (247), ag (251), ag (254), ag (255), ag (260), ag (264), ag (280), ag (286), ag (287), ag (292), ag (296), ag (300), ag (303), ag (313), ag (319), ag (327), ag (328), ag (360), ag (365), ag (390), ac (409), Editing mismatches: 32, all mismatches: 33, alignment length: 378, cluster length: 259, total number of As: 69 Locations in RNA: 131 153 154 176 184 191 192 197 220 221 231 236 247 251 254 255 260 264 280 286 287 292 296 300 303 313 319 327 328 360 365 390 Locations in genome: 111291290 111291312 111291313 111291335 111291343 111291350 111291351 111291356 111291379 111291380 111291390 111291395 111291406 111291410 111291413 111291414 111291419 111291423 111291439 111291445 111291446 111291451 111291455 111291459 111291462 111291472 111291478 111291486 111291487 111291518 111291523 111291548 Upstream nucleotide (in genome): c t a g c c a c c a a c a t a a t c c t a c t c g c a g a g c c Upstream nucleotide summary: a: 10, c: 13, g: 4, t: 5, other: 0 Downstream nucleotide (in genome): g a t g g a g g a c c t a c a a g g c a t g c g g g t a c t c g Downstream nucleotide summary: a: 8, c: 7, g: 12, t: 5, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 1, at: 3, ca: 2, cc: 2, cg: 8, ct: 1, ga: 1, gc: 0, gg: 2, gt: 1, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr6:111291198-111291573 (+) tagtgatcctcctgtcttagcctctggatgtgctgggattacaggcatgaaccactgcacccagccaaaggtgtataacattaattctggccaggtgcagtggctcacacctgtaatcccaccactttgggaggccgaggtgggcagatcacaaggtcaggagattgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggtgtggtggtgcacacctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggaggc-ggaggttgcagtgagctgagattgcaccactgcactccagcctgggtgacagagtgagactccgtctcaaaaa-aaa >BG429737:39-416 (+) tagtgatcctcctgtcttagcctctggatgtgctgggattacaggcatgaaccactgcacccagccaaaggtgtataacattaattctggccgggtgcagtggctcacacctgtggtcccaccactttgggaggccggggtgggcggatcacggggtcgggagattgagaccagcctggccggcatggtgaagccccgtctctactaagaatgcaggaattggccgggtgtggtggtgcacgcctgtggtcccggctgctcggggggctgaggcgggagagttgcttgggcctgggaggccggaggttgcagtgagctgaggttgcgccactgcactccagcctgggtgacggagtgagactccgtctcacaaacaaa End editing Edited EST: AW262656, type: ga Aligns to: chr6:44081431-44081918 (++) All mismatches: ga (105), ga (121), ga (135), ga (165), ga (193), ga (201), ga (207), ga (210), ga (248), ga (256), ga (259), ga (268), ga (270), ga (280), ga (284), ga (286), ga (289), ga (295), ga (307), ga (308), ga (315), ga (319), ga (324), ga (334), ga (336), ga (338), ga (351), ga (361), ga (362), ga (366), ga (369), ga (375), ga (376), ga (379), ga (388), gt (409), ga (414), ga (418), ga (421), ga (423), ga (425), ga (426), ga (432), ga (435), ga (436), ga (440), ga (441), ga (442), ga (445), cg (448), ga (453), ga (454), ga (460), ga (463), ga (480), Editing mismatches: 53, all mismatches: 55, alignment length: 488, cluster length: 376, total number of Gs: 102 Locations in RNA: 105 121 135 165 193 201 207 210 248 256 259 268 270 280 284 286 289 295 307 308 315 319 324 334 336 338 351 361 362 366 369 375 376 379 388 414 418 421 423 425 426 432 435 436 440 441 442 445 453 454 460 463 480 Locations in genome: 44081534 44081550 44081564 44081594 44081622 44081630 44081636 44081639 44081677 44081685 44081688 44081697 44081699 44081709 44081713 44081715 44081718 44081724 44081736 44081737 44081744 44081748 44081753 44081763 44081765 44081767 44081780 44081790 44081791 44081795 44081798 44081804 44081805 44081808 44081817 44081843 44081847 44081850 44081852 44081854 44081855 44081861 44081864 44081865 44081869 44081870 44081871 44081874 44081882 44081883 44081889 44081892 44081909 Upstream nucleotide (in genome): a c a t c c c a a c t t a t g a c t g g g t t t a c t t g a a t g c t t t a c a g c t g t g g t a g t t c Upstream nucleotide summary: a: 12, c: 11, g: 11, t: 19, other: 0 Downstream nucleotide (in genome): a a a a c c c g g t t a g t a t a g g g c c c a c c t g c t t g t c c g c c a g a a g t g g c t g g t t c Downstream nucleotide summary: a: 11, c: 15, g: 15, t: 12, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 5, at: 3, ca: 4, cc: 6, cg: 0, ct: 1, ga: 2, gc: 3, gg: 4, gt: 2, ta: 3, tc: 4, tg: 6, tt: 6, other: 0 >chr6:44081431-44081918 (+) taaatgaatacatttattctctcacaggatactacactgttacccagtgtgaagggagcagccatgtggctcccaagctcccttagcaaaagggtggttctcagaactgctccattcacgagtcctgcaaccagaggcctgggctcaactcacacaaagttctgagcaatggccagcaccttggaatactcgccttcccgcttgcgcaggctggtggggatgggtgtcttaattcgtgtccccacagggttcccgttgtcctcaatgaggaccacgttgttggagtcgaatctgggggtcattcgggggccaggcatgcagtgccccacaatgagcgcctttttcttctgtcccttgatggccagtagtatctggtcgcccaccttgcccactccattcttcttatagacatggatgcagcgaggagcccgatggtatgggctgttccccagggcactgttgtccaccactcgtacccgcgtcatctt >AW262656:2-489 (+) taaatgaatacatttattctctcacaggatactacactgttacccagtgtgaagggagcagccatgtggctcccaagctcccttagcaaaagggtggttctcaaaactgctccattcacaagtcctgcaaccaaaggcctgggctcaactcacacaaagttctaagcaatggccagcaccttggaatactcaccttcccacttgcacaagctggtggggatgggtgtcttaattcntgtccccacaaggttcccattatcctcaataaagaccacgttattgaaatcaaatctaggggtcattcgaaggccagacatacagtaccccacaataaacacctttttcttctatcccttgataaccaataatatctaatcacccaccttacccactccattcttcttatatacatagatacaacaaaaagcccaataatataaactattgcccaaagcactattatccaccactcgtacccacgtcatctt End editing Edited EST: AA324518, type: ag Aligns to: chr6:25700194-25700469 (++) All mismatches: ag (48), ag (71), ag (79), ag (80), ag (95), ag (105), ag (116), ag (120), ag (122), ag (126), ag (127), ag (129), ag (141), ag (169), ag (177), ag (201), ag (215), Editing mismatches: 17, all mismatches: 17, alignment length: 276, cluster length: 168, total number of As: 49 Locations in RNA: 48 71 79 80 95 105 116 120 122 126 127 129 141 169 177 201 215 Locations in genome: 25700241 25700264 25700272 25700273 25700288 25700298 25700309 25700313 25700315 25700319 25700320 25700322 25700334 25700362 25700370 25700394 25700408 Upstream nucleotide (in genome): a c t a a a t a a c a a c c a a t Upstream nucleotide summary: a: 10, c: 4, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g g a g c c c a t a a a t c g c g Downstream nucleotide summary: a: 5, c: 5, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 3, at: 1, ca: 1, cc: 1, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr6:25700194-25700469 (+) ccgggcacggtggctcactcctgtaatcctagcactttgggaggccaaggtgggcggatcaccaggggtcaggagtttaagaccagcctggccaacaggatgaaaccctatctctactaaaatacaaaaattagccgggcatgatggcgggtgactgtaagcccagccactcgggaagctgagatgggagaatcgcttgaacccgggagacggtagttgcagtgagccgagatcactgccactgcactccagcagggacggctgcgacttcgtctc >AA324518:1-276 (+) ccgggcacggtggctcactcctgtaatcctagcactttgggaggccagggtgggcggntcaccaggggtcgggagtttgggaccagcctggccagcaggatgaagccctatctctgctagagtacggagattagccgggcgtgatggcgggtgactgtaagcccagccgctcgggaggctgagatgggagaatcgcttnagcccgggagacggtggttgcagtgagccgagatcactgccactgcactccagcagggacggctgcnacttcgtctc End editing Edited EST: AA708991, type: ag Aligns to: chr6:35233084-35233352 (++) All mismatches: ag (4), ag (17), ag (39), ag (43), ag (45), ag (48), ag (49), ag (50), ag (54), ag (58), ag (74), ag (80), ag (86), ag (90), ag (110), ag (113), ag (116), ag (122), ag (126), ag (133), ag (146), ag (151), ag (156), Editing mismatches: 23, all mismatches: 23, alignment length: 267, cluster length: 155, total number of As: 47 Locations in RNA: 4 17 39 43 45 48 49 50 54 58 74 80 86 90 110 113 116 122 126 133 146 151 156 Locations in genome: 35233085 35233100 35233122 35233126 35233128 35233131 35233132 35233133 35233137 35233141 35233157 35233163 35233169 35233173 35233193 35233196 35233199 35233205 35233209 35233216 35233229 35233234 35233239 Upstream nucleotide (in genome): g c t a t a a a t c c t c t g a c a c c g g c Upstream nucleotide summary: a: 6, c: 8, g: 4, t: 5, other: 0 Downstream nucleotide (in genome): c t a t c a a a g g c a g c g t c c g g g g c Downstream nucleotide summary: a: 5, c: 7, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 0, at: 2, ca: 0, cc: 3, cg: 4, ct: 1, ga: 0, gc: 1, gg: 3, gt: 0, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr6:35233084-35233352 (+) gaccagcctggccaacatggcgaaaccccagctctactaaaaatacaaaaattagccaggcgtggtggcaggcacctgtaatcccagctactcgggaggctgaggcacgagaatcacttcaacccaggaggcagaggttgcagtgagctgagatcacgctgctgcactccagcctgggcgacagagcgagactctgtctcaaaaaaaaaaaaaaaagaagaagaagaagaagaaaatgccaggattctgggtgttaaaattttaaatag >AA708991:3-269 (+) ggcc-gcctgg-caacgtggcgaaaccccagctctactgaaagtgcagggattggccgggcgtggtggcaggcgcctgtgatcccggctgctcgggaggctgaggcacgggagtcgcttcagcccgggaggcggaggttgcagtgggctgggatcgcgctgctgcactccagcctgggcgacagagcgagactctgtctcaaaaaaaaaaaaaaaagaagaagaagaagaagaaaatgccaggattctgggtgttaaaattttaaatag End editing Edited EST: DA592085, type: ag Aligns to: chr7:56143531-56144112 (++) All mismatches: ag (79), ag (81), ag (87), ag (96), ag (172), ag (211), ag (321), ag (328), ag (331), ag (398), ag (452), ag (453), ag (501), ag (510), ag (516), ag (536), ag (568), Editing mismatches: 17, all mismatches: 17, alignment length: 584, cluster length: 488, total number of As: 82 Locations in RNA: 79 81 87 96 172 211 321 328 331 398 452 453 501 510 516 536 568 Locations in genome: 56143609 56143611 56143617 56143625 56143701 56143739 56143849 56143856 56143859 56143926 56143980 56143981 56144029 56144038 56144044 56144064 56144096 Upstream nucleotide (in genome): t c c c c g t g t t a a t t c c c Upstream nucleotide summary: a: 2, c: 7, g: 2, t: 6, other: 0 Downstream nucleotide (in genome): c g c g c g g c c g a g t g g g t Downstream nucleotide summary: a: 1, c: 5, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 0, cc: 2, cg: 4, ct: 1, ga: 0, gc: 1, gg: 1, gt: 0, ta: 0, tc: 2, tg: 3, tt: 1, other: 0 >chr7:56143531-56144112 (+) ggtacatcagtgatcaaagttttttgttttttgttttttgttttgagacagtctagctctgtcgcccaaggctggagtacagtggcac-gatctcagctccctgcaacctccgcctcccgggttcaagggattctcctgcctcagcctccctagtacctgggattacaggcacctgccaccatgcccggcta-ttttttttttttttttgagacagagtgtcgctgtgtcgcccaggctggagtatggtggcgcgatcgcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccacctcgcccggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatgatctcgatctcctgacctcctgatccgtctgccttggcctcccaaagtgctgggattacaggcgtgagccaccatgccctgcataatttttgtatttttagtagagacaggatttcactgtgttggccaggctggtctcgaactcctgacctcgtgatccatctgcctcggtctccc >DA592085:1-584 (+) ggtacatcagtgatcaaagttttttgttttttgttttttgttttgagacagtctagctctgtcgcccaaggctggagtgcggtggcgctgatctcggctccctgcaacctccgcctcccgggttcaagggattctcctgcctcagcctccctagtacctgggattacaggcgcctgccaccatgcccggctatttttttttttttttttgggacagagtgtcgctgtgtcgcccaggctggagtatggtggcgcgatcgcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaagtggctggggctgcaggcgcccgccacctcgcccggctaattttttgtatttttagtagagacggggtttcaccgtgttggccaggatgatctcgatctcctgacctcctgatccgtctgccttggcctcccagggtgctgggattacaggcgtgagccaccatgccctgcataatttttgtgtttttagtggagacgggatttcactgtgttggccgggctggtctcgaactcctgacctcgtgatccgtctgcctcggtctccc End editing Edited EST: DB122192, type: ag Aligns to: chr7:87523254-87523814 (++) All mismatches: ag (256), ag (268), ag (319), ag (322), ag (331), ag (332), ag (359), ag (375), ag (379), ag (391), ag (401), ag (447), ag (448), Editing mismatches: 13, all mismatches: 13, alignment length: 561, cluster length: 193, total number of As: 50 Locations in RNA: 256 268 319 322 331 332 359 375 379 391 401 447 448 Locations in genome: 87523509 87523521 87523572 87523575 87523584 87523585 87523612 87523628 87523632 87523644 87523654 87523700 87523701 Upstream nucleotide (in genome): c c g c c a a t c c t c a Upstream nucleotide summary: a: 3, c: 7, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): c g c g a c a g g t g a g Downstream nucleotide summary: a: 3, c: 3, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 0, ca: 2, cc: 1, cg: 3, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr7:87523254-87523814 (+) ttttgttgttttattttagtggttgctataggatttacgatatacatgtgtgacctttcgcaatctatcttgaattaatatttaccttcttcaaataaaatgtagaagccttaaaatattcaagcccttttaccttccccaccaacctttatgccataatgtttagtacatcttcttataatgaaaatgtcaccagacaatgttaaactttttgcttgaaaaagtcatattttagggctgggcctggtggctcacacctgtcatcccagcactttgggaggccaaggtgggtggatcactttagctcagaagttcgagaccagcctgggcaacatggtgaaaccccatctctacaaaaaatatatatataaattagccaggcctggtggcatgcgcctgtagtcccacctgcttaggaggctgaggtggcatgatggccttagcccaagaggcggaggttgcagagaggcaagatcatgccactgcttgcgacagggcaagaccctgtctcggggaaaaaaaagaaaaaaaaagttgggttttaaagaaagcgacaggagg >DB122192:1-561 (+) ttttgttgttttattttagtggttgctataggatttacgatatacatgtgtgacctttcgcaatctatcttgaattaatatttaccttcttcaaataaaatgtagaagccttaaaatattcaagcccttttaccttccccaccaacctttatgccataatgtttagtacatcttcttataatgaaaatgtcaccagacaatgttaaactttttgcttgaaaaagtcatattttagggctgggcctggtggctcacgcctgtcatcccggcactttgggaggccaaggtgggtggatcactttagctcagaagttcgaggccggcctgggcggcatggtgaaaccccatctctacaaaagatatatatataaattggccgggcctggtggcgtgcgcctgtggtcccacctgcttaggaggctgaggtggcatgatggccttagcccgggaggcggaggttgcagagaggcaagatcatgccactgcttgcgacagggcaagaccctgtctcggggaaaaaaaagaaaaaaaaagttgggttttaaagaaagcgacaggagg End editing Edited EST: DB204288, type: ag Aligns to: chr7:66174482-66175060 (++) All mismatches: ag (24), ag (70), ag (90), ag (97), ag (107), ag (117), ag (132), ag (134), ag (135), ag (137), ag (145), ag (149), ag (161), ag (174), ag (187), ag (201), ag (227), ag (236), ag (264), ag (269), Editing mismatches: 20, all mismatches: 20, alignment length: 579, cluster length: 246, total number of As: 70 Locations in RNA: 24 70 90 97 107 117 132 134 135 137 145 149 161 174 187 201 227 236 264 269 Locations in genome: 66174505 66174551 66174571 66174578 66174588 66174598 66174613 66174615 66174616 66174618 66174626 66174630 66174642 66174655 66174668 66174682 66174708 66174717 66174745 66174750 Upstream nucleotide (in genome): c c t c a a a a a t t c a c c g a c a c Upstream nucleotide summary: a: 8, c: 8, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g g g g c c a a t c g g t g g a c a g a Downstream nucleotide summary: a: 5, c: 4, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 1, at: 2, ca: 2, cc: 0, cg: 6, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr7:66174482-66175060 (+) atattcaaattgaggctgggcgcagggctcacacctgtaatcccagcactttgtgagtccgaggtgggcagatcaggagttcaggagttagagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatacgaaattagccaggcatcttgtaatcccacctactcaggagcctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgaaccaagatcaagccactgcactccagcctgggtgacaagagcaaaactccatgtcaaagaaaagaaaaaagaaagaaagcaaatattccagttaaatcaggtcattgattttgactagatgtctaagtgtcatgtacacctaggaggtaatactagaaacaattgggtatacccaaccctcacaccacaatgcaaaagtaacattaattaacacagtcatgaaatgcagttctaccaaaacaataaagttgtttagtggagaaaatattttattttgctttcatttttaattttaaattaagtaaaatttgaaagttcttttgcactagcccacctatcaagtagtcagcagc >DB204288:1-579 (+) atattcaaattgaggctgggcgcggggctcacacctgtaatcccagcactttgtgagtccgaggtgggcggatcaggagttcaggagttggagaccggcctgaccagcatggtgaagccctgtctctactagaggtgcgaaattggccgggcatcttgtagtcccacctactcgggagcctgaggcgggagaatcgcttggacctgggaggtggaggttgcagtgagccaagatcgagccactgcactccagcctgggtgacaggagcgaaactccatgtcaaagaaaagaaaaaagaaagaaagcaaatattccagttaaatcaggtcattgattttgactagatgtctaagtgtcatgtacacctaggaggtaatactagaaacaattgggtatacccaaccctcacaccacaatgcaaaagtaacattaattaacacagtcatgaaatgcagttctaccaaaacaataaagttgtttagtggagaaaatattttattttgctttcatttttaattttaaattaagtaaaatttgaaagttcttttgcactagcccacctatcaagtagtcagcagc End editing Edited EST: DW422328, type: ag Aligns to: chr7:75934794-75935074 (++) All mismatches: ag (15), ag (16), ag (18), ag (22), ag (49), ag (54), ag (58), ag (62), ag (81), ag (89), ag (90), ag (94), ag (101), ag (104), ag (110), ag (114), ag (118), ag (140), ag (217), ag (277), Editing mismatches: 20, all mismatches: 20, alignment length: 281, cluster length: 263, total number of As: 83 Locations in RNA: 15 16 18 22 49 54 58 62 81 89 90 94 101 104 110 114 118 140 217 277 Locations in genome: 75934794 75934795 75934797 75934801 75934828 75934833 75934837 75934841 75934860 75934868 75934869 75934873 75934880 75934883 75934889 75934893 75934897 75934919 75934996 75935056 Upstream nucleotide (in genome): n a a t a c t c a g a c c a c g c c a c Upstream nucleotide summary: a: 7, c: 8, g: 2, t: 2, other: 1 Downstream nucleotide (in genome): a a a g t g c g t a c g g g g g a g g a Downstream nucleotide summary: a: 6, c: 2, g: 10, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 2, at: 2, ca: 2, cc: 0, cg: 6, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 1 >chr7:75934794-75935074 (+) aaaaattagccgggcatggtgttgcatgcctgtaattccagctactcaggaggctgaggcaggggaatcgcttgaacccaggaggcagaagttgcagtgagccaagatccatgccactgccctccagcttgggggacaagagcaaaactccatctaaaaaaaaaaaacaaaaaacagatgggagctttggagctcagtcccaaggtcctcaaatattt-gagggacccagagtctgaggctgtagcaagatactcccatgttcaaggcggagcatgcagtga >DW422328:15-295 (+) ggagattggccgggcatggtgttgcatgcctgtagttccggctgctcgggaggctgaggcaggggagtcgcttgggcccgggaggcggaggttgcggtgggccgagatccatgccactgccctccggcttgggggacaagagcaaaactccatctaaaaaaaaaaaacaaaaaacagatgggagctttggagctcagtcccagggtcctcaaat-tttcgagggacccagagtctgaggctgtagcaagatactcccatgttcgaggcggagcatgcagtga End editing Edited EST: DW422653, type: ag Aligns to: chr7:44732462-44732740 (++) All mismatches: ag (39), ag (44), ag (62), ag (64), ag (68), ag (71), ag (80), ag (206), ag (207), ag (212), ag (258), ag (259), ag (260), ag (264), ag (274), ag (278), Editing mismatches: 16, all mismatches: 16, alignment length: 278, cluster length: 241, total number of As: 70 Locations in RNA: 39 44 62 64 68 71 80 206 207 212 258 259 260 264 274 278 Locations in genome: 44732484 44732489 44732507 44732509 44732513 44732516 44732525 44732652 44732653 44732658 44732704 44732705 44732706 44732710 44732720 44732724 Upstream nucleotide (in genome): a t c c t a t t a c c a a c a t Upstream nucleotide summary: a: 6, c: 5, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): a g c c t c c a t g a a a g c g Downstream nucleotide summary: a: 5, c: 5, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 0, at: 1, ca: 1, cc: 2, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 1, other: 0 >chr7:44732462-44732740 (+) catctctacaaaaaaaatttaaaaattagctgggcctggtggtgcacacctataacaccagctacacagaaggctggcatgagaggtgagctacgattgcaccactgcactccagtctggttgacagaccatgactctctctttaaaaaaaaaaaaaaaattcttgctgggcgtggtggctcactcctgtaatcccagcactttgggaggctgaggcaggtggatcacaaggtcaggagttcaaaatcagcctggctaacatagtgaaaccccgtctct >DW422653:17-294 (+) catctctacaaaaaaaatttaagaattggctgggcctggtggtgcgcgcctgtagcaccagctgcacagaaggctggcatgagaggtgagctacgattgcaccactgcactccagtctggttgacagaccatgactctctcttt-aaaaaaaaaaaaaaattcttgctgggcgtggtggctcactcctgtggtcccggcactttgggaggctgaggcaggtggatcacaaggtcaggagttcgggatcggcctggctagcatggtgaaaccccgtctct End editing Edited EST: DW425083, type: ag Aligns to: chr7:99941469-99941713 (++) All mismatches: ag (14), ag (23), ag (28), ag (36), ag (37), ag (59), ag (60), ag (68), ag (69), ag (84), ag (87), ag (107), ag (117), ag (123), ag (131), ag (158), ag (159), ag (172), ag (179), ag (183), ag (184), ag (188), ag (195), ga (224), ga (253), Editing mismatches: 23, all mismatches: 25, alignment length: 244, cluster length: 182, total number of As: 54 Locations in RNA: 14 23 28 36 37 59 60 68 69 84 87 107 117 123 131 158 159 172 179 183 184 188 195 Locations in genome: 99941473 99941482 99941487 99941495 99941496 99941518 99941519 99941527 99941528 99941543 99941546 99941566 99941576 99941582 99941590 99941617 99941618 99941631 99941638 99941642 99941643 99941647 99941654 Upstream nucleotide (in genome): c c c c a c a g a t a c t c c g a g c g a g c Upstream nucleotide summary: a: 6, c: 10, g: 5, t: 2, other: 0 Downstream nucleotide (in genome): g g g a g a c a a a a t g g g a c g g a c g c Downstream nucleotide summary: a: 8, c: 4, g: 10, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 1, at: 0, ca: 2, cc: 1, cg: 6, ct: 1, ga: 3, gc: 0, gg: 2, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr7:99941469-99941713 (+) ggccagggtgggcagatcaggaggtcaagagattgagaccatcctggccaacatggtgaaaccctgtctctactaaaaatacaacaaaattggtggcatgcgcctgtagtcccagctactcaggaggctcagacaggagaatcgcttgaacccgggagacggaggttgcagtgaaccgagattgcaccactgcactccagcctggcaactggacgagactctgtttcaaaaaaaaaaaaaaaaag >DW425083:10-253 (+) ggccggggtgggcggatcgggaggtcgggagattgagaccatcctggccggcatggtgggaccctgtctctactgaagatacaacaaaattggtggcgtgcgcctgtggtcccggctactcgggaggctcagacaggagaatcgcttgggcccgggagacgggggttgcggtgggccgggattgcgccactgcactccagcctggcaactggacaagactctgtt-caaaaaaaaaaaaaaaaaa End editing Edited EST: DW426188, type: ag Aligns to: chr7:4743800-4744073 (++) All mismatches: ag (36), ag (63), ag (72), ag (82), ag (96), ag (113), ag (114), ag (127), ag (130), ag (131), ag (132), ag (136), ag (141), ag (142), ag (155), ag (171), ag (172), ag (177), ag (181), ag (194), ag (198), ag (212), ag (213), ag (217), ag (219), ag (220), ag (244), ag (247), ag (252), ag (271), ag (282), Editing mismatches: 31, all mismatches: 31, alignment length: 274, cluster length: 247, total number of As: 68 Locations in RNA: 36 63 72 82 96 113 114 127 130 131 132 136 141 142 155 171 172 177 181 194 198 212 213 217 219 220 244 247 252 271 282 Locations in genome: 4743826 4743853 4743862 4743872 4743886 4743903 4743904 4743917 4743920 4743921 4743922 4743926 4743931 4743932 4743945 4743961 4743962 4743967 4743971 4743984 4743988 4744002 4744003 4744007 4744009 4744010 4744034 4744037 4744042 4744061 4744072 Upstream nucleotide (in genome): t c c c c t a t t a a c a a t t a c t g c g a c g a g c c c g Upstream nucleotide summary: a: 8, c: 11, g: 5, t: 7, other: 0 Downstream nucleotide (in genome): a g c g g a a c a a a c a t g a t g c g g a c g a g t c c a c Downstream nucleotide summary: a: 11, c: 8, g: 9, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 1, at: 2, ca: 1, cc: 4, cg: 6, ct: 0, ga: 2, gc: 1, gg: 1, gt: 1, ta: 4, tc: 2, tg: 1, tt: 0, other: 0 >chr7:4743800-4744073 (+) ggccgggcgtggtggcgcacacctgtaattccagcactttgggaggctgaggcaggtggatcacttgaggtcaggagtttgagaccagcctggccaatgtggtaaaacctcgtttctactaaaaacacaaaaattagtcgggcgtagtggggcacgcctgtaatcccagctactcgggtggctgaggcaggagaatcacttgaactcagaaggtgaagattgtagtgagctgagatcacgccactgcactccagcctgggcaacagagtgagac >DW426188:10-283 (+) ggccgggcgtggtggcgcacacctgtgattccagcactttgggaggctgaggcgggtggatcgcttgaggtcgggagtttgagaccggcctggccaatgtggtggaacctcgtttctgctgggaacgcaaaggttagtcgggcgtggtggggcacgcctgtggtcccggctgctcgggtggctggggcgggagaatcacttgggctcggggggtgaagattgtagtgagctgaggtcgcgccgctgcactccagcctgggcgacagagtgaggc End editing Edited EST: DW429141, type: ag Aligns to: chr7:4755531-4755787 (++) All mismatches: ag (124), ag (139), ag (147), ag (148), ag (168), ag (191), ag (216), ag (217), ag (218), ag (223), ag (227), ag (244), ag (250), ag (266), ag (270), Editing mismatches: 15, all mismatches: 15, alignment length: 257, cluster length: 147, total number of As: 42 Locations in RNA: 124 139 147 148 168 191 216 217 218 223 227 244 250 266 270 Locations in genome: 4755638 4755653 4755661 4755662 4755682 4755705 4755730 4755731 4755732 4755737 4755741 4755758 4755764 4755780 4755784 Upstream nucleotide (in genome): c a c a g t g a a c t c a a c Upstream nucleotide summary: a: 6, c: 5, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): g g a g t g a a t g c g t g g Downstream nucleotide summary: a: 3, c: 1, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 3, at: 2, ca: 1, cc: 0, cg: 4, ct: 0, ga: 1, gc: 0, gg: 0, gt: 1, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr7:4755531-4755787 (+) ggccaccaatatctgctgtctgtgcttaaaggatcaaaaatgcagacctcagtcaggcgcagtggttcacgcctgtaatcccagcactttgggaggccaaggtgggcagatcacttgaggtaaggagttcaagaccagtttggccaatatgatgaaaccctgtctctacaaattagacaggcgtggtggtgggtgcctgaaatcccagctacctgggaggctgaggcaggagaattgcttgaatccagaaggcagag >DW429141:17-273 (+) ggccaccaatatctgctgtctgtgcttaaaggatcaaaaatgcagacctcagtcaggcgcagtggttcacgcctgtaatcccagcactttgggaggccaaggtgggcggatcacttgaggtagggagttcgggaccagtttggccaatatggtgaaaccctgtctctacaaattggacaggcgtggtggtgggtgcctggggtcccggctgcctgggaggctgaggcgggagagttgcttgaatccagagggcggag End editing Edited EST: DW429515, type: ag Aligns to: chr7:100037671-100038059 (++) All mismatches: ag (14), cg (17), ag (47), ag (56), ag (57), ag (59), ag (63), ag (66), ag (72), ag (81), ag (82), ag (83), ag (95), ag (113), ag (121), ag (122), ag (127), ag (135), ag (159), ag (160), ag (184), ag (203), ac (276), Editing mismatches: 21, all mismatches: 23, alignment length: 389, cluster length: 190, total number of As: 52 Locations in RNA: 14 47 56 57 59 63 66 72 81 82 83 95 113 121 122 127 135 159 160 184 203 Locations in genome: 100037672 100037705 100037714 100037715 100037717 100037721 100037724 100037730 100037739 100037740 100037741 100037753 100037771 100037779 100037780 100037785 100037793 100037817 100037818 100037842 100037861 Upstream nucleotide (in genome): c c c a c g a c t a a t c t a c c g a g t Upstream nucleotide summary: a: 6, c: 8, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): g g a c t g a t a a a g t a t g g a g g c Downstream nucleotide summary: a: 7, c: 2, g: 8, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 1, ca: 1, cc: 0, cg: 4, ct: 3, ga: 1, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr7:100037671-100038059 (+) caggcagatcacctgaggttgggagtttgagatcagcctgaccaacatggagaaaccccatttctactaaaaatacaaaattagccgggtgtggtggtgcatgcttgtaatcccagctactcaggaggctgaggcagaattgcctgaagctgggaggcggaggttgcagtgagccagagatcgtgccattacattccagcctgggcaacaagagcaaaactctgtctcaaaataataataataataataataattaaaaaaaaaaaaacagtacgagtgtgaagatcggaaggtggaggtgagggaggtgagaggtcttgggcctgcccacattcttcctaagctattttggctggcccaggctgggaggccaggaattgcttttcctc >DW429515:13-401 (+) cggggagatcacctgaggttgggagtttgagatcggcctgaccggcgtggggagaccccgtttctactgggaatacaaaattggccgggtgtggtggtgcgtgcttgtggtcccggctactcgggaggctgaggcagaattgcctggggctgggaggcggaggttgcagtgggccagagatcgtgccattgcattccagcctgggcaacaagagcaaaactctgtctcaaaataataataataataataataattaaaaaaaacaaaacagtacgagtgtgaagatcggaaggtggaggtgagggaggtgagaggtcttgggcctgcccacattcttcctaagctattttggctggcccaggctgggaggccaggaattgcttttcctc End editing Edited EST: DW433122, type: ag Aligns to: chr7:73814229-73814476 (++) All mismatches: ag (16), ag (17), ag (34), ag (94), ag (105), ag (108), ag (109), ag (111), ag (112), ag (119), ag (156), ct (189), ag (217), ag (242), ag (255), Editing mismatches: 14, all mismatches: 15, alignment length: 248, cluster length: 240, total number of As: 65 Locations in RNA: 16 17 34 94 105 108 109 111 112 119 156 217 242 255 Locations in genome: 73814229 73814230 73814247 73814307 73814318 73814321 73814322 73814324 73814325 73814332 73814369 73814430 73814455 73814468 Upstream nucleotide (in genome): n a a a t t a a a a t a t g Upstream nucleotide summary: a: 8, c: 0, g: 1, t: 4, other: 1 Downstream nucleotide (in genome): a t g c c a a a t a c g g g Downstream nucleotide summary: a: 5, c: 3, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 2, at: 2, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 1 >chr7:73814229-73814476 (+) aatcccagcactttgggaagccgaggcgggtggatcacgaggtcaggagattgagaccatcctggctaacacggtgaaaccacgtctctactaaaaataggaaaaaattagcggggcgtggtggtgggcccctcccagctactcaggaggctgaggcaggagaatggcatgaacccgggaggcggagcttgcagagacccaagatcgcgccactgcactccagcctaggtgatagagcgagactctgt >DW433122:16-263 (+) ggtcccagcactttgggaggccgaggcgggtggatcacgaggtcaggagattgagaccatcctggctaacacggtgaagccacgtctctgctggaggtaggaagaaattagcggggcgtggtggtgggcccctcccagctgctcaggaggctgaggcaggagaatggcatgaatccgggaggcggagcttgcagagacccaggatcgcgccactgcactccagcctgggtgatagagcgggactctgt End editing Edited EST: DW436701, type: ag Aligns to: chr7:73903231-73903466 (++) All mismatches: ag (19), ag (37), ag (55), ag (56), ag (71), ag (75), ag (76), ag (78), ag (92), ag (95), ag (96), ag (104), ag (137), ag (142), ag (146), ag (150), ag (163), ag (189), ag (206), ag (207), Editing mismatches: 20, all mismatches: 20, alignment length: 236, cluster length: 189, total number of As: 57 Locations in RNA: 19 37 55 56 71 75 76 78 92 95 96 104 137 142 146 150 163 189 206 207 Locations in genome: 73903234 73903252 73903270 73903271 73903286 73903290 73903291 73903293 73903307 73903310 73903311 73903319 73903352 73903357 73903361 73903365 73903378 73903404 73903421 73903422 Upstream nucleotide (in genome): g c c a a t a c t t a a a c t c c c c a Upstream nucleotide summary: a: 7, c: 8, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g c a g c a c a c a a a t g c g g g a g Downstream nucleotide summary: a: 7, c: 5, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 2, at: 1, ca: 3, cc: 1, cg: 4, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 2, tg: 0, tt: 0, other: 0 >chr7:73903231-73903466 (+) gggaggccaaggtggcggatcacctgaggtcaggagttcaagaccagcctggccaacataacaaaaccccgtctctactaaaaatacaaaaattagccgggtgtggtggtgggttcctgtaatcccagctactcaggaggctgaggcaggagaatcatttgaacccaggaggcagaagttgcagtgagccaagatcgtgccactgcactccagcctgggcaacagggtaagactcc >DW436701:16-251 (+) ggggggccaaggtggcggatcgcctgaggtcaggagttcgggaccagcctggccagcatggcgaaaccccgtctctgctggaaatacagaaattagccgggtgtggtggtgggttcctgtagtcccggctgctcgggaggctgaggcgggagaatcatttgaacccaggaggcggaagttgcagtgagccgggatcgtgccactgcactccagcctgggcaacagggtaagactcc End editing Edited EST: DW451667, type: ag Aligns to: chr7:44758553-44758911 (++) All mismatches: ag (17), ag (49), ag (67), ag (70), ag (73), ag (76), ag (89), ag (96), ag (106), ct (120), ag (139), ag (197), tc (245), ag (308), ag (316), ag (317), ag (343), ag (346), ag (349), ag (357), ag (358), ag (369), Editing mismatches: 20, all mismatches: 22, alignment length: 359, cluster length: 353, total number of As: 85 Locations in RNA: 17 49 67 70 73 76 89 96 106 139 197 308 316 317 343 346 349 357 358 369 Locations in genome: 44758553 44758585 44758603 44758606 44758609 44758612 44758625 44758632 44758642 44758675 44758733 44758844 44758852 44758853 44758879 44758882 44758885 44758893 44758894 44758905 Upstream nucleotide (in genome): n g a c a a c c a t t c t a c g a g a c Upstream nucleotide summary: a: 7, c: 6, g: 3, t: 3, other: 1 Downstream nucleotide (in genome): g g g g g t g g t g t t a t g g t a c g Downstream nucleotide summary: a: 2, c: 1, g: 11, t: 6, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 4, ca: 0, cc: 0, cg: 5, ct: 1, ga: 1, gc: 0, gg: 2, gt: 0, ta: 1, tc: 0, tg: 1, tt: 1, other: 1 >chr7:44758553-44758911 (+) agtcgggcatggtgatgcacgcctttagtccgagctactcgggaggctgaagcagaagaatcgcttgaacccaggagacagaggttgcaatgatctgagatcgcgccactgcactccagcctaggtgactctgtctcgggcaaaaaaatttcttttaaagccgagcccagccatgggtttataccatcaagtacctatgagttgggtaaattcctctcctctttatgttccaagataacttgggcctcctgggattgtcagaagtgacattctgcctgggcgaggtggctcatgcctgtaatcccagctactcgggagactgaggcaggagaatcgcttgaacctgggaggcagaggtt >DW451667:17-375 (+) ggtcgggcatggtgatgcacgcctttagtccgggctactcgggaggctgaggcggaggagtcgcttgaacccgggagacggaggttgcagtgatctgagatcgtgccactgcactccagcctgggtgactctgtctcgggcaaaaaaatttcttttaaagccgagcccagccatgggtttgtaccatcaagtacctatgagttgggtaaattcctctcctctttatgtcccaagataacttgggcctcctgggattgtcagaagtgacattctgcctgggcgaggtggctcgtgcctgtggtcccagctactcgggagactgaggcgggggagtcgcttgggcctgggaggcggaggtt End editing Edited EST: DB568069, type: ag Aligns to: chr7:17384683-17384936 (++) All mismatches: ag (48), ag (92), ag (95), ag (96), ag (101), ag (110), ag (136), ag (150), ag (163), ag (178), ag (198), ag (205), Editing mismatches: 12, all mismatches: 12, alignment length: 254, cluster length: 158, total number of As: 47 Locations in RNA: 48 92 95 96 101 110 136 150 163 178 198 205 Locations in genome: 17384730 17384774 17384777 17384778 17384783 17384792 17384818 17384832 17384845 17384860 17384880 17384887 Upstream nucleotide (in genome): a t t a t t t c c a c a Upstream nucleotide summary: a: 4, c: 3, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): g c a a c g g g g c g g Downstream nucleotide summary: a: 2, c: 3, g: 7, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 0, ca: 0, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr7:17384683-17384936 (+) gtaatcccagcacttggggagggcgaggagggtggatcacgaggtcaagagatggagaccatcctgaccaacatggtgaaaccctgtctctactaaaaatacagaaattagctgggcatggtggcgtgagcctgtagtcctagctactcaggaggctgaggcaggagaatagcctgaacctgggaatcggaggttgcagagccaagatcgccccactgcactccagcctggcaatagaccgagactccgtctcc >DB568069:1-254 (+) gtaatcccagcacttggggagggcgaggagggtggatcacgaggtcaggagatggagaccatcctgaccaacatggtgaaaccctgtctctgctggaaatgcagaaattggctgggcatggtggcgtgagcctgtggtcctagctactcgggaggctgaggcgggagaatagcctgagcctgggaatcggaggttgcggagccaggatcgccccactgcactccagcctggcaatagaccgagactccgtctcc End editing Edited EST: DB547471, type: ag Aligns to: chr7:102020282-102020716 (++) All mismatches: tg (82), ag (195), ag (228), ag (279), ag (285), ag (286), ag (287), ag (291), ag (317), ag (318), ag (323), ag (344), ag (347), ag (350), ag (359), ag (363), ag (370), ag (379), ag (422), ag (423), cg (431), Editing mismatches: 19, all mismatches: 21, alignment length: 435, cluster length: 229, total number of As: 59 Locations in RNA: 195 228 279 285 286 287 291 317 318 323 344 347 350 359 363 370 379 422 423 Locations in genome: 102020476 102020509 102020560 102020566 102020567 102020568 102020572 102020598 102020599 102020604 102020625 102020628 102020631 102020640 102020644 102020651 102020660 102020703 102020704 Upstream nucleotide (in genome): t c a a a a t t a c c g a a c c c g a Upstream nucleotide summary: a: 8, c: 6, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): a g a a a a g a t g t g t a g g g a a Downstream nucleotide summary: a: 9, c: 0, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 6, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 5, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chr7:102020282-102020716 (+) agtataattgtcaagatggagctaaaaaaataacatgggtgaacaaggtgccacccacatgcaagcttccttcccatgtcatgtaatgcctctcctcatctgctccatcaatcaataaaggcataatcactcctgtgatacctttaagaaaagaacacactctctcaaagctgggtgcagtggtgcacgcctgtaatcccagcctcctttgggaggccgaggcgggcagatcacctgaggtcaggagttggagaccagcgaaacccatctctactaaaaatacaaaaattagctgggcgtggtggtgcttgtctgtaatcccagctacttgggaggctgaggcatgagaatcgcttgaaaccaggaggcagaggctgcagtgagccgagactgtgccactgcactccagcctgggtgacagaaagagactctgtc >DB547471:1-435 (+) agtataattgtcaagatggagctaaaaaaataacatgggtgaacaaggtgccacccacatgcaagcttccttcccatgtcaggtaatgcctctcctcatctgctccatcaatcaataaaggcataatcactcctgtgatacctttaagaaaagaacacactctctcaaagctgggtgcagtggtgcacgcctgtgatcccagcctcctttgggaggccgaggcgggcggatcacctgaggtcaggagttggagaccagcgaaacccatctctactaaagatacagggattggctgggcgtggtggtgcttgtctgtggtcccggctacttgggaggctgaggcgtgggagtcgcttgagaccgggaggcggaggctgcggtgagccgagactgtgccactgcactccagcctgggtgacagggagagactgtgtc End editing Edited EST: DB538197, type: ag Aligns to: chr7:102020307-102020716 (++) All mismatches: tg (56), ag (169), ag (202), ag (253), ag (259), ag (260), ag (261), ag (265), ag (291), ag (292), ag (297), ag (318), ag (321), ag (324), ag (333), ag (337), ag (344), ag (353), ag (396), ag (397), cg (405), Editing mismatches: 19, all mismatches: 21, alignment length: 409, cluster length: 229, total number of As: 59 Locations in RNA: 169 202 253 259 260 261 265 291 292 297 318 321 324 333 337 344 353 396 397 Locations in genome: 102020476 102020509 102020560 102020566 102020567 102020568 102020572 102020598 102020599 102020604 102020625 102020628 102020631 102020640 102020644 102020651 102020660 102020703 102020704 Upstream nucleotide (in genome): t c a a a a t t a c c g a a c c c g a Upstream nucleotide summary: a: 8, c: 6, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): a g a a a a g a t g t g t a g g g a a Downstream nucleotide summary: a: 9, c: 0, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 6, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 5, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chr7:102020307-102020716 (+) aaaaataacatgggtgaacaaggtgccacccacatgcaagcttccttcccatgtcatgtaatgcctctcctcatctgctccatcaatcaataaaggcataatcactcctgtgatacctttaagaaaagaacacactctctcaaagctgggtgcagtggtgcacgcctgtaatcccagcctcctttgggaggccgaggcgggcagatcacctgaggtcaggagttggagaccagcgaaacccatctctactaaaaatacaaaaattagctgggcgtggtggtgcttgtctgtaatcccagctacttgggaggctgaggcatgagaatcgcttgaaaccaggaggcagaggctgcagtgagccgagactgtgccactgcactccagcctgggtgacagaaagagactctgtc >DB538197:1-409 (+) aaaaataacatgggtgaac-aggtgccacccacatgcaagcttccttcccatgtcaggtaatgcctctcctcatctgctccatcaatcaataaaggcataatcactcctgtgatacctttaagaaaagaacacactctctcaaagctgggtgcagtggtgcacgcctgtgatcccagcctcctttgggaggccgaggcgggcggatcacctgaggtcaggagttggagaccagcgaaacccatctctactaaagatacagggattggctgggcgtggtggtgcttgtctgtggtcccggctacttgggaggctgaggcgtgggagtcgcttgagaccgggaggcggaggctgcggtgagccgagactgtgccactgcactccagcctgggtgacagggagagactgtgtc End editing Edited EST: BM705390, type: ag Aligns to: chr7:156768917-156769260 (++) All mismatches: at (102), ag (148), ag (166), ag (169), ag (179), ag (184), ag (185), ag (198), ag (204), ag (205), ag (222), ag (234), ag (244), ag (262), ag (270), ag (271), ag (285), ag (288), ag (295), ag (302), Editing mismatches: 19, all mismatches: 20, alignment length: 345, cluster length: 155, total number of As: 32 Locations in RNA: 148 166 169 179 184 185 198 204 205 222 234 244 262 270 271 285 288 295 302 Locations in genome: 156769063 156769081 156769084 156769094 156769099 156769100 156769113 156769119 156769120 156769137 156769149 156769159 156769177 156769185 156769186 156769200 156769203 156769210 156769217 Upstream nucleotide (in genome): c c g c c a c c a c t t c t a t t a c Upstream nucleotide summary: a: 4, c: 9, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g c t c a c g a g g g c c a t g g g c Downstream nucleotide summary: a: 3, c: 6, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 1, ca: 2, cc: 4, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 1, tg: 3, tt: 0, other: 0 >chr7:156768917-156769260 (+) tgccttcagctttgttctttctcaaggttgctttggctgtttggggtcttttgtagttccatatgaattttagagttgttttttcttttaattaatta-ttatttttttttttttttgagacaaagtctcgctgtctgtttgttgccaggctggagtgcagtggcacgatctcggctcactgcaacctccacctcccaggttcaagcgattctcctgcctcagcctccccagtagctgggactacaggcacgtgccaccacacctggctaatttttgtatttttagtagagtcaaggtttcaccatgttggccaggctggtcttgatctcttgacctcgtgatcc >BM705390:1-345 (+) tgccttcagctttgttctttctcaaggttgctttggctgtttggggtcttttgtagttccatatgaattttagagttgttttttcttttaattaattatttttttttttttttttttgagacaaagtctcgctgtctgtttgttgccgggctggagtgcagtggcgcggtctcggctcgctgcggcctccacctcccgggttcgggcgattctcctgcctcggcctccccagtggctgggactgcaggcacgtgccaccacgcctggctggtttttgtatttttggtggagtcagggtttcgccatgttggccaggctggtcttgatctcttgacctcgtgatcc End editing Edited EST: CD249907, type: ga Aligns to: chr7:100865884-100866076 (++) All mismatches: tc (183), ga (203), ga (204), ga (206), ga (207), ga (208), ga (209), ga (211), ga (212), ga (214), ga (215), ga (217), ga (218), Editing mismatches: 12, all mismatches: 13, alignment length: 190, cluster length: 19, total number of Gs: 12 Locations in RNA: 203 204 206 207 208 209 211 212 214 215 217 218 Locations in genome: 100866056 100866058 100866060 100866061 100866063 100866064 100866067 100866068 100866070 100866071 100866073 100866074 Upstream nucleotide (in genome): g t a g c g t g a g a g Upstream nucleotide summary: a: 3, c: 1, g: 6, t: 2, other: 0 Downstream nucleotide (in genome): t a g c g a g a g a g a Downstream nucleotide summary: a: 5, c: 1, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 3, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 4, gc: 1, gg: 0, gt: 1, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr7:100865884-100866076 (+) gttcgctcccaggaccccgggcagcggcgggtgctggaccgggctgcccggcagcgtcgcatcaaccggcagctggaggccctggagaatgacaacttccaggatgacccccacgcgggactccctcagctcggcaagagactgcctcagtttgatgacgatgcggacactggtgaggcggatggaggaggaa >CD249907:31-220 (+) gttcgctcccaggaccccgggcagcggcgggtgctggaccgggctgcccggcagcgtcgcatcaaccggcagctggaggccctggagaatgacaacttccaggatgacccccacgcgggactccctcagctcggcaagagactgcctcagttcgatgacgatgcggacactga-aaaa-aaa-aaaaaaaaaa End editing Edited EST: BG896717, type: ag Aligns to: chr7:40113363-40113672 (++) All mismatches: ag (88), ag (97), ag (174), ag (241), ag (242), ag (246), ag (247), ag (248), ag (294), ag (318), ag (324), ag (325), ag (341), ag (363), ag (385), ag (389), Editing mismatches: 16, all mismatches: 16, alignment length: 310, cluster length: 302, total number of As: 55 Locations in RNA: 88 97 174 241 242 246 247 248 294 318 324 325 341 363 385 389 Locations in genome: 40113365 40113374 40113451 40113518 40113519 40113523 40113524 40113525 40113571 40113595 40113601 40113602 40113618 40113640 40113662 40113666 Upstream nucleotide (in genome): t t a t a t a a c c c a c t c t Upstream nucleotide summary: a: 5, c: 5, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): t g g a g a a g g g a g g c g a Downstream nucleotide summary: a: 5, c: 1, g: 9, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 4, at: 0, ca: 1, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 3, tc: 1, tg: 1, tt: 1, other: 0 >chr7:40113363-40113672 (+) gtatttttagtagagacggggtttcaccatgttggccaggatggccttgatatcgcgaccttgtgatctgcccacctcagcctcctaaagtgctgggattacaggcgtgagcaaccgtgcctggcctttctttttttccttttttttttttttttaagataaagtcttgctgtctgtcatccaggctggagtgcagtggcctgatctcagctcactgcaacctccacctcccaggttcaagtgattctctgcctcagcctcccaagtagctgggattacaggtgtgcgccaccatgcccagctaattttt >BG896717:86-395 (+) gtgtttttagtggagacggggtttcaccatgttggccaggatggccttgatatcgcgaccttgtgatctgcccacctcagcctcctaaggtgctgggattacaggcgtgagcaaccgtgcctggcctttctttttttccttttttttttttttttgggatggggtcttgctgtctgtcatccaggctggagtgcagtggcctgatctcggctcactgcaacctccacctcccgggttcgggtgattctctgcctcggcctcccaagtagctgggattgcaggtgtgcgccaccatgcccggctgattttt End editing Edited EST: AW236916, type: ga Aligns to: chr7:103008343-103008587 (++) All mismatches: ga (290), ga (292), ga (295), ga (307), ga (311), ga (318), ga (322), ga (323), ga (327), ga (331), ga (340), ga (345), ga (355), ga (366), ga (375), ga (376), ga (382), ga (390), ga (406), ga (418), ga (435), ga (446), ga (456), ag (526), Editing mismatches: 23, all mismatches: 24, alignment length: 245, cluster length: 167, total number of Gs: 40 Locations in RNA: 290 292 295 307 311 318 322 323 327 331 340 345 355 366 375 376 382 390 406 418 435 446 456 Locations in genome: 103008344 103008346 103008349 103008361 103008365 103008372 103008376 103008377 103008381 103008385 103008394 103008399 103008409 103008420 103008429 103008430 103008436 103008444 103008460 103008472 103008489 103008500 103008510 Upstream nucleotide (in genome): g t t c t a t g t t a g t a t g t a t t t t a Upstream nucleotide summary: a: 5, c: 1, g: 4, t: 13, other: 0 Downstream nucleotide (in genome): t c a t c g g t t c c c c g g a t g c c a a g Downstream nucleotide summary: a: 4, c: 8, g: 6, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 4, at: 0, ca: 0, cc: 0, cg: 0, ct: 1, ga: 1, gc: 1, gg: 0, gt: 2, ta: 3, tc: 6, tg: 2, tt: 2, other: 0 >chr7:103008343-103008587 (+) ggtgctgagattagaagcgtctgcacagaggctggtatgtttgccatcagagcacggcgaaaaattgctaccgagaaggatttcttggaagctgtaaataaggtcattaagtcttatgccaaattcagtgctactcctcgttacatgacatacaactgaaccctgaaggctttcaagtgaaaactttaaattggaatcctaaccttatatagacttgttaataaccaattcataaacaaataaat >AW236916:289-533 (+) gatactaagattagaagcatctacacagaagctaatatatttaccatcagaacacgacgaaaaattactaccgagaaagatttcttaaaagctataaataaagtcattaagtcttataccaaattcagtactactcctcgttacataacatacaactaaaccctgaaagctttcaagtgaaaactttaaattggaatcctaaccttatatanacttgttaataaccaattcataaacgaataaat End editing Edited EST: AW238956, type: ga Aligns to: chr7:102574218-102574499 (++) All mismatches: ga (106), ga (116), ga (143), ga (154), ga (174), ga (202), ga (213), ga (222), ga (224), ga (232), ga (233), ga (240), ga (244), ga (246), ga (248), ga (250), ga (251), ga (260), ga (268), ga (273), ga (279), ga (286), ga (287), ga (290), gc (292), ga (295), ga (297), ga (317), ga (319), ga (331), ga (338), ga (339), ga (342), ga (343), ga (344), ga (346), ga (347), ga (350), ga (354), ga (358), ga (363), ga (364), ga (375), Editing mismatches: 42, all mismatches: 43, alignment length: 283, cluster length: 269, total number of Gs: 80 Locations in RNA: 106 116 143 154 174 202 213 222 224 232 233 240 244 246 248 250 251 260 268 273 279 286 287 290 295 297 317 319 331 338 339 342 343 344 346 347 350 354 358 363 364 375 Locations in genome: 102574225 102574235 102574262 102574273 102574293 102574321 102574332 102574341 102574343 102574351 102574352 102574359 102574363 102574365 102574367 102574369 102574370 102574379 102574387 102574392 102574398 102574405 102574406 102574409 102574414 102574416 102574436 102574438 102574450 102574457 102574458 102574461 102574462 102574463 102574465 102574466 102574469 102574473 102574476 102574481 102574482 102574493 Upstream nucleotide (in genome): a c a a g c c t g t g a t c t t g t t t t c g t t c t t t t g c g g c g t g c a g g Upstream nucleotide summary: a: 5, c: 9, g: 12, t: 16, other: 0 Downstream nucleotide (in genome): g t a t a t a g g g a g c t t g t t c c c g c a c c t a a g c g g c g g g c g g c t Downstream nucleotide summary: a: 7, c: 11, g: 15, t: 9, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 3, at: 1, ca: 1, cc: 1, cg: 4, ct: 3, ga: 2, gc: 5, gg: 3, gt: 2, ta: 3, tc: 5, tg: 5, tt: 3, other: 0 >chr7:102574218-102574499 (+) cagcctagggactccacgtaccccagctgggtctcattgttccagaactgcattagttaagattacccagacttggatttcaaaggaatactttcattgttccgtctgtaacacgaagtaattggggccagctggatgtcaggatgcgtgtggttaccattgtaatcttgctctgcttttgcaaagcggctgagctgcgcaaagcaagcccaggcagtgtgagaagccgagtgaatcatggccgggcgggtggaggcc-ggagaggctccaacccggtcaaac >AW238956:99-381 (+) cagcctaaggactccacataccccagctgggtctcattgttccaaaactgcattaattaagattacccagacttgaatttcaaaggaatactttcattgttccatctgtaacacaaagtaattagagccagctaaatgtcaagatacatataattaccattataatcttactctacttttacaaagcaactaacctacacaaagcaagcccaggcagtataagaagccgagtaaatcataaccaaacaagtagagacccagagaaactccaacccgatcaaac End editing Edited EST: AW770910, type: ga Aligns to: chr7:7606749-7607102 (++) All mismatches: cg (104), ga (199), ga (202), ga (207), ga (222), ga (223), ga (225), ga (244), ga (257), ga (266), ga (268), ga (276), ga (289), ga (309), ga (311), ga (316), ga (322), ga (325), Editing mismatches: 17, all mismatches: 18, alignment length: 354, cluster length: 127, total number of Gs: 45 Locations in RNA: 199 202 207 222 223 225 244 257 266 268 276 289 309 311 316 322 325 Locations in genome: 7606947 7606950 7606955 7606970 7606971 7606973 7606992 7607005 7607014 7607016 7607024 7607037 7607057 7607059 7607064 7607070 7607073 Upstream nucleotide (in genome): c c c c g c a t c g g t c t t c t Upstream nucleotide summary: a: 1, c: 8, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): c c g g c t g c g a a c t c t t t Downstream nucleotide summary: a: 2, c: 6, g: 4, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 2, cg: 3, ct: 3, ga: 2, gc: 1, gg: 0, gt: 0, ta: 0, tc: 3, tg: 0, tt: 2, other: 0 >chr7:7606749-7607102 (+) gcggccgcagcgaggggccggagatagcctagttgaaaggcccgggcgtctcggcggggagcgcgttccgcgctgtagggtaatcgcgccgggcggccggccgcctggccgggcctcagcgggagccaccgggggctgcgggcggccgtgggacctgcggagacctcctcggggcgcagggaacacgctacagccttcgccgcggcgggcttgtggggagcggcgtcccagcctttcccgggaggctcagccaggtgcctggagcgggagagtcggactcagattcctgctttacctagaatagcaacgtgccctgttcccgttgtaccctcttaaatactatacttcttaaac >AW770910:1-354 (+) gcggccgcagcgaggggccggagatagcctagttgaaaggcccgggcgtctcggcggggagcgcgttccgcgctgtagggtaatcgcgccgggcggccggccggctggccgggcctcancgggagccaccgggggctgcgggcggccgtgggacctgcggagacctcctcggggcgcagggaacacgctacanccttcaccacggcaggcttgtggggagcaacatcccagcctttcccgggaagctcagccaggtacctggagcagaagagtcgaactcagattcctactttacctagaatagcaacataccctattcccattataccctcttaaatactatacttcttaaac End editing Edited EST: DA092575, type: ag Aligns to: chr8:105242228-105242667 (++) All mismatches: ag (42), ag (79), ag (80), ag (85), ag (91), ag (94), ag (95), ag (105), ag (128), ag (133), ag (155), ag (159), ag (160), ag (165), ag (173), ag (205), ag (225), ag (230), ag (235), ag (245), ag (269), ag (270), ag (271), Editing mismatches: 23, all mismatches: 23, alignment length: 440, cluster length: 230, total number of As: 64 Locations in RNA: 42 79 80 85 91 94 95 105 128 133 155 159 160 165 173 205 225 230 235 245 269 270 271 Locations in genome: 105242269 105242306 105242307 105242312 105242318 105242321 105242322 105242332 105242355 105242360 105242382 105242386 105242387 105242392 105242400 105242432 105242452 105242457 105242462 105242472 105242496 105242497 105242498 Upstream nucleotide (in genome): g c a c g c a a a c c t a c c c g g c c a a a Upstream nucleotide summary: a: 8, c: 10, g: 4, t: 1, other: 0 Downstream nucleotide (in genome): g a g g c a c c a g t a t g g g g g c c a a c Downstream nucleotide summary: a: 6, c: 6, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 1, at: 1, ca: 2, cc: 2, cg: 5, ct: 1, ga: 0, gc: 1, gg: 3, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr8:105242228-105242667 (+) gccggcatgctggctcacacctgtaatcccagcactttgggaggctgaggtgggcggatcacctgaggtcgggagttcaagaccagcctgaccaacatggagaaaccctgtctctactaaaaatacaaaatcagccaggcttggtggtgcatgcatgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggtggaggttggggtgagctgagatcactccattgcactccagtctgggcaacgagagcaaaactacatctcaaaaaaaaaaaaaaaataggttttgtttaaatgagactaaaaggaaaggaaattttattttagcaacttaaaaataaaactatcagccaggcgcggtggctcacgcttataatctcagcactttgggaggccgagccaggtggatcgcctgaggtcagga >DA092575:1-440 (+) gccggcatgctggctcacacctgtaatcccagcactttggggggctgaggtgggcggatcacctgaggtcgggagttcgggaccggcctggccggcatggagaagccctgtctctactaaaaatacagaatcggccaggcttggtggtgcatgcgtgtggtcccggctactcgggaggctgaggcaggagaatctcttgaacccgggaggtggaggttggggtgggctgggatcgctccattgcgctccagtctgggcaacgagagcagggctacatctcaaaaaaaaaaaaaaaataggttttgtttaaatgagactaaaaggaaaggaaattttattttagcaacttaaaaataaaactatcagccaggcgcggtggctcacgcttataatctcagcactttgggaggccgagccaggtggatcgcctgaggtcagga End editing Edited EST: DA096447, type: ag Aligns to: chr8:10289952-10290498 (++) All mismatches: ag (11), ag (12), ag (17), tc (37), ag (47), ag (57), ag (71), ag (80), ag (81), ag (83), ag (89), ag (90), ag (91), ag (111), ag (126), ag (148), ag (149), ag (154), ag (158), ag (162), ag (171), ag (175), ag (181), ag (184), ag (189), ag (190), ag (201), ag (210), ag (214), ag (218), ag (221), ag (229), ag (239), ag (249), ag (252), Editing mismatches: 34, all mismatches: 35, alignment length: 548, cluster length: 242, total number of As: 67 Locations in RNA: 11 12 17 47 57 71 80 81 83 89 90 91 111 126 148 149 154 158 162 171 175 181 184 189 190 201 210 214 218 221 229 239 249 252 Locations in genome: 10289962 10289963 10289968 10289998 10290008 10290022 10290031 10290032 10290034 10290040 10290041 10290042 10290062 10290077 10290099 10290100 10290105 10290109 10290113 10290122 10290126 10290132 10290135 10290140 10290141 10290152 10290161 10290165 10290169 10290172 10290180 10290190 10290200 10290203 Upstream nucleotide (in genome): t a c c c c c a c g a a t c t a c t c g c a c g a c c g c t c c a a Upstream nucleotide summary: a: 9, c: 16, g: 4, t: 5, other: 0 Downstream nucleotide (in genome): a t g c g g a c t a a c c g a t g c g g g t c a c g g g a t c g c g Downstream nucleotide summary: a: 7, c: 9, g: 13, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 4, ag: 1, at: 3, ca: 2, cc: 3, cg: 10, ct: 1, ga: 2, gc: 0, gg: 2, gt: 0, ta: 2, tc: 2, tg: 0, tt: 1, other: 0 >chr8:10289952-10290498 (+) tcgcacctgtaatcccagcactttgggaggccgaggtgggcggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaaaattatccaggtgtggtggttggcacctgtaatcccagctactcaggatgctgaggcaggagaatcacttgaacctgggaggcagaggttgcagcgagccaatattgcaccactgcactccagcctgggcaacaagagcgagactccatctcaagaaaaataaataaacaaaaattgaactggacagttcacttagggacatgttgcttgtttaacgtcttagagcttctgttgtgatggccatggcgtgtcattctactgcccctgttgaccctgccacccccaacttctagcagaaagtgctggtagattgccacgctctttcctgccaagcccaggcacactttcagaattcctctacaccaaggaccttgggaaggccctgccaacctatcagacttggttt-ccaggtgagacccagagctttcct >DA096447:1-548 (+) tcgcacctgtggtcccggcactttgggaggccgaggcgggcggatcgcctgaggtcgggagttcgagaccggcctggccggcgtggtggggccccgtctctactaaaaatgcaaaaaaattatccgggtgtggtggttggcacctgtggtcccggctgctcgggatgctggggcgggagagtcgcttgggcctgggaggcggaggttgcggcgggccgatgttgcaccgctgcactccggcctgggcagcaggagcgagactccatctcaagaaaaataaataaacaaaaattgaactggacagttcacttagggacatgttgcttgtttaacgtcttagagcttctgttgtgatggccatggcgtgtcattctactgcccctgttgaccctgccacccccaacttctagcagaaagtgctggtagattgccacgctctttcctgccaagcccaggcacactttcagaattcctctacaccaaggaccttgggaaggccctgccaacctatcagacttggttttccaggtgagacccagagctttcct End editing Edited EST: DW412389, type: ag Aligns to: chr8:25138621-25138929 (++) All mismatches: ag (16), ag (60), ag (82), ag (83), ag (118), ag (136), ag (137), ag (138), ag (139), ag (160), ag (161), ag (163), ag (174), ag (177), ag (180), ag (183), ag (186), ag (187), ag (192), ag (202), ag (218), ag (219), ag (224), ag (228), ag (262), ag (270), ag (271), ag (282), ag (299), ag (300), ag (305), Editing mismatches: 31, all mismatches: 31, alignment length: 309, cluster length: 290, total number of As: 82 Locations in RNA: 16 60 82 83 118 136 137 138 139 160 161 163 174 177 180 183 186 187 192 202 218 219 224 228 262 270 271 282 299 300 305 Locations in genome: 25138621 25138665 25138687 25138688 25138723 25138741 25138742 25138743 25138744 25138765 25138766 25138768 25138779 25138782 25138785 25138788 25138791 25138792 25138797 25138807 25138823 25138824 25138829 25138833 25138867 25138875 25138876 25138887 25138904 25138905 25138910 Upstream nucleotide (in genome): n c t a c c a a a t a a t t a t a a t t t a c t a g a c c a c Upstream nucleotide summary: a: 13, c: 7, g: 1, t: 9, other: 1 Downstream nucleotide (in genome): g g a t c a a a c a a c c a a c a a g g a t g c t a c g a g c Downstream nucleotide summary: a: 13, c: 8, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 6, ac: 3, ag: 1, at: 3, ca: 2, cc: 2, cg: 3, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 4, tc: 3, tg: 2, tt: 0, other: 1 >chr8:25138621-25138929 (+) aggtctaccattgaatagaatgaagaaagaagtgaatgggggccaggtgcagtggctcgtgcctgtaatcccagcactttgggaggctgaggacggcggatcacttgaggtcacgagttcaaaaccagcccgtcccaatatggtaaaaccccttctctactaaaaatacaaaaattagctgggtgtagtggcttgtgcctgtaatcccagctactcgggaggctgaggcaggagaatcgcaggagaatcgcttgaactggggaggcagaggttgcagtgagccaagatcacactgttgcacttcagcct >DW412389:16-324 (+) gggtctaccattgaatagaatgaagaaagaagtgaatgggggccgggtgcagtggctcgtgcctgtggtcccagcactttgggaggctgaggacggcggatcgcttgaggtcacgagttcggggccagcccgtcccaatatggtggagccccttctctgctgaagatgcaggaattggctgggtgtggtggcttgtgcctgtggtcccggctgctcgggaggctgaggcaggagaatcgcaggagagtcgcttgggctggggaggcggaggttgcagtgagccgggatcgcactgttgcacttcagcct End editing Edited EST: DW430052, type: ag Aligns to: chr8:33355110-33355486 (++) All mismatches: ag (16), ag (17), ag (46), ag (56), ag (92), ag (98), ag (101), ag (115), ag (118), ag (137), ag (156), ag (157), ag (170), ag (187), ag (192), ta (213), ag (264), ag (265), ag (270), ag (281), ag (300), ag (310), ag (319), ag (324), ag (333), ag (334), ag (338), ag (341), ag (343), ag (344), ag (362), ag (364), ag (367), ag (373), Editing mismatches: 33, all mismatches: 34, alignment length: 377, cluster length: 358, total number of As: 94 Locations in RNA: 16 17 46 56 92 98 101 115 118 137 156 157 170 187 192 264 265 270 281 300 310 319 324 333 334 338 341 343 344 362 364 367 373 Locations in genome: 33355110 33355111 33355140 33355150 33355186 33355192 33355195 33355209 33355212 33355231 33355250 33355251 33355264 33355281 33355286 33355358 33355359 33355364 33355375 33355394 33355404 33355413 33355418 33355427 33355428 33355432 33355435 33355437 33355438 33355456 33355458 33355461 33355467 Upstream nucleotide (in genome): n a t t t t t c c t t a c a t t a t g c c g c c a t c a a a t a t Upstream nucleotide summary: a: 9, c: 8, g: 2, t: 13, other: 1 Downstream nucleotide (in genome): a g g c t g g c t g a t g g g a t g g c g g g a c g a a c t c a g Downstream nucleotide summary: a: 7, c: 6, g: 15, t: 5, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 2, at: 3, ca: 2, cc: 2, cg: 3, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 2, tg: 8, tt: 1, other: 1 >chr8:33355110-33355486 (+) aagcgattctcctccttcagcctcccaagtagctggaattacaggcatgtgccactccacccggctaattttttgtatttttagtagacacggggtttcaccatgttggccaggctggtctagaactccagacctctggtaatccgcctgcctcagtctcccaaagtgctaagattagaggcatgagtcacagggcctggcctaaaattttttaaaaatcatgaccaggcgtggtggctcacgcctataatcctagcactttgggaggccgaggtgggcggatcacatgaggtcaggagttcgagaccagcctggccaacatagcaaaaccccgtgtctactaaaaatacaaaaattagctaggtatggtggtgcat >DW430052:16-392 (+) gggcgattctcctccttcagcctcccaagtggctggaattgcaggcatgtgccactccacccggctaattttttgtgtttttggtggacacggggtttcgccgtgttggccaggctggtctggaactccagacctctggtggtccgcctgcctcggtctcccaaagtgctaggattggaggcatgagtcacagggccaggcctaaaattttttaaaaatcatgaccaggcgtggtggctcacgcctatggtcctggcactttggggggccgaggtgggcggatcgcatgaggtcgggagttcgggaccggcctggccggcatggcgaggccccgtgtctactaaaagtgcagaaattggctaggtatggtggtgcat End editing Edited EST: DW432052, type: ag Aligns to: chr8:8872976-8873226 (++) All mismatches: ag (73), ag (110), ag (111), ag (113), ag (114), ag (116), ag (121), ag (126), ag (130), ag (158), ag (179), ag (193), ag (194), ag (201), ga (260), Editing mismatches: 14, all mismatches: 15, alignment length: 251, cluster length: 129, total number of As: 36 Locations in RNA: 73 110 111 113 114 116 121 126 130 158 179 193 194 201 Locations in genome: 8873032 8873069 8873070 8873072 8873073 8873075 8873080 8873085 8873089 8873117 8873138 8873152 8873153 8873160 Upstream nucleotide (in genome): g t a a a t a c c c c g a g Upstream nucleotide summary: a: 5, c: 4, g: 3, t: 2, other: 0 Downstream nucleotide (in genome): c a a a t c g g g g g a c g Downstream nucleotide summary: a: 4, c: 3, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 1, ca: 0, cc: 0, cg: 4, ct: 0, ga: 1, gc: 1, gg: 1, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr8:8872976-8873226 (+) cacttagtttacagagttgtgagcataaaataagaccatcgtgtcaggagatcgagaccatcctggctaacatggtgaaacccagtctctactaaaaatacaaaagatcagccaggcgtggtggcaggcgtctgtagtcccagctagttgggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagccgagattgtggcagtgcactccagcctgggagacagagcgagactct >DW432052:17-267 (+) cacttagtttacagagttgtgagcataaaataagaccatcgtgtcaggagatcgaggccatcctggctaacatggtgaaacccagtctctactggaggtgcaaaggatcggccgggcgtggtggcaggcgtctgtagtcccggctagttgggaggctgaggcgggagaatggcgtgggcctggggggcggagcttgcagtgagccgagattgtggcagtgcactccagcctgggagacagagcaagactct End editing Edited EST: DW432396, type: ag Aligns to: chr8:25122099-25122346 (++) All mismatches: ag (50), ag (58), ag (73), ag (74), ag (99), ag (100), ag (104), ag (107), ag (108), ag (113), ag (114), ag (141), ag (154), ag (218), ag (231), ag (248), Editing mismatches: 16, all mismatches: 16, alignment length: 249, cluster length: 199, total number of As: 62 Locations in RNA: 50 58 73 74 99 100 104 107 108 113 114 141 154 218 231 248 Locations in genome: 25122132 25122140 25122155 25122156 25122181 25122182 25122186 25122189 25122190 25122195 25122196 25122223 25122236 25122300 25122313 25122330 Upstream nucleotide (in genome): c c c a t a t a a t a a g c c c Upstream nucleotide summary: a: 6, c: 6, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g a a c a a c a a a g t g c g g Downstream nucleotide summary: a: 7, c: 3, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 1, ca: 2, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr8:25122099-25122346 (+) tgggaggccgaggctggtggatcaattgaggtcaggagttcaagaccagtctggccaacgtggtgaaaccctgtctctacttaaaatacaaaaaataagctaggcatggtggcacacctctgtaatcccagctactgagaaggatgaaccatgagaatttcttgaacctgggaggaggaggttgcagtgaaccaacattgcaccactgcactccagcctgggtgacagagcaggactgtctca-aaaaa >DW432396:17-265 (+) tgggaggccgaggctggtggatcaattgaggtcgggagttcgagaccagtctggccggcgtggtgaaaccctgtctctacttggaatgcaggaaatgggctaggcatggtggcacacctctgtagtcccagctactgggaaggatgaaccatgagaatttcttgaacctgggaggaggaggttgcagtgaaccaacattgcgccactgcactccggcctgggtgacagagcgggactgtctcataaaaa End editing Edited EST: DW452249, type: ag Aligns to: chr8:33355110-33355464 (++) All mismatches: ag (16), ag (17), ag (46), ag (56), ag (92), ag (98), ag (101), ag (115), ag (118), ag (137), ag (156), ag (157), ag (170), ag (187), ag (192), ta (213), ag (264), ag (265), ag (270), ag (281), ag (300), ag (310), ag (319), ag (324), ag (333), ag (334), ag (338), ag (341), ag (343), ag (344), ag (362), ag (364), ag (367), Editing mismatches: 32, all mismatches: 33, alignment length: 355, cluster length: 352, total number of As: 90 Locations in RNA: 16 17 46 56 92 98 101 115 118 137 156 157 170 187 192 264 265 270 281 300 310 319 324 333 334 338 341 343 344 362 364 367 Locations in genome: 33355110 33355111 33355140 33355150 33355186 33355192 33355195 33355209 33355212 33355231 33355250 33355251 33355264 33355281 33355286 33355358 33355359 33355364 33355375 33355394 33355404 33355413 33355418 33355427 33355428 33355432 33355435 33355437 33355438 33355456 33355458 33355461 Upstream nucleotide (in genome): n a t t t t t c c t t a c a t t a t g c c g c c a t c a a a t a Upstream nucleotide summary: a: 9, c: 8, g: 2, t: 12, other: 1 Downstream nucleotide (in genome): a g g c t g g c t g a t g g g a t g g c g g g a c g a a c t c a Downstream nucleotide summary: a: 7, c: 6, g: 14, t: 5, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 2, at: 3, ca: 2, cc: 2, cg: 3, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 2, tg: 7, tt: 1, other: 1 >chr8:33355110-33355464 (+) aagcgattctcctccttcagcctcccaagtagctggaattacaggcatgtgccactccacccggctaattttttgtatttttagtagacacggggtttcaccatgttggccaggctggtctagaactccagacctctggtaatccgcctgcctcagtctcccaaagtgctaagattagaggcatgagtcacagggcctggcctaaaattttttaaaaatcatgaccaggcgtggtggctcacgcctataatcctagcactttgggaggccgaggtgggcggatcacatgaggtcaggagttcgagaccagcctggccaacatagcaaaaccccgtgtctactaaaaatacaaaaa >DW452249:16-370 (+) gggcgattctcctccttcagcctcccaagtggctggaattgcaggcatgtgccactccacccggctaattttttgtgtttttggtggacacggggtttcgccgtgttggccaggctggtctggaactccagacctctggtggtccgcctgcctcggtctcccaaagtgctaggattggaggcatgagtcacagggccaggcctaaaattttttaaaaatcatgaccaggcgtggtggctcacgcctatggtcctggcactttggggggccgaggtgggcggatcgcatgaggtcgggagttcgggaccggcctggccggcatggcgaggccccgtgtctactaaaagtgcagaaa End editing Edited EST: AL133762, type: ag Aligns to: chr8:37634108-37634733 (++) All mismatches: ag (214), ag (221), ag (247), ag (264), ag (271), ag (277), ag (278), ag (282), ag (303), ag (307), ag (317), ag (344), ag (367), ag (380), ag (440), ag (458), Editing mismatches: 16, all mismatches: 16, alignment length: 625, cluster length: 245, total number of As: 54 Locations in RNA: 214 221 247 264 271 277 278 282 303 307 317 344 367 380 440 458 Locations in genome: 37634321 37634328 37634354 37634371 37634378 37634384 37634385 37634389 37634410 37634414 37634424 37634451 37634474 37634487 37634547 37634565 Upstream nucleotide (in genome): t c c c c c a g c t t a c t a c Upstream nucleotide summary: a: 3, c: 8, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): t g g c g a g t a g c t g t g t Downstream nucleotide summary: a: 2, c: 2, g: 7, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 1, ca: 2, cc: 1, cg: 4, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 1, tg: 1, tt: 2, other: 0 >chr8:37634108-37634733 (+) ggaaataagaaattaattataattataatttcataaattataaacataattccataagtgtagtctaaaggaaaataagaaattaagctataatttttggaaaggcatttcattacgtaagtgcgtgggcatggctgtatcacagcaaatcacgatgaagcagcctaaggcttcatgtttgtttgtttttttttggagactgagtctcgctctattgcccaggccggagtgcagtggcgcgatctcagctcactgtaacctccacctcccaggttcaagtgattctcctgcttcagcctcccaagtagctgggattacaggcgcctgccacaatgcccagctaatttttgaatttttagttaagacagggtttcaccgtattggccaggctggtctcgaactcctgacctcaggtaatccacccacctaggcctcccaaagtgatgggattacaggcatgagccactgcacccgtccgaggcttaatcttatgtgtagattcaccaacaatcttatatgtacatcaacagctgtaaatatcaactgatacaggtgtgctagattggcaacgcaaatacatgattttctgaaatagcaaataacttgataaagtttcaaaaatcaaa >AL133762:1-625 (+) ggaaataagaaattaattataattataatttcataaattataaacataattccataagtgtagtctaaaggaaaataagaaattaagctataatttttggaaaggcatttcattacgtaagtgcgtgggcatggctgtatcacagcaaatcacgatgaagcagcctaaggcttcatgtttgtttgtttttttttggagactgagtctcgctctgttgcccgggccggagtgcagtggcgcgatctcggctcactgtaacctccgcctcccgggttcgggtggttctcctgcttcagcctcccgagtggctgggattgcaggcgcctgccacaatgcccagctagtttttgaatttttagttaagacggggtttcaccgtgttggccaggctggtctcgaactcctgacctcaggtaatccacccacctaggcctcccaaggtgatgggattacaggcgtgagccactgcacccgtccgaggcttaatcttatgtgtagattcaccaacaatcttatatgtacatcaacagctgtaaatatcaactgatacaggtgtgctagattggcaacgcaaatacatgattttctgaaatagcaaataacttgataaagtttcaaaa-tcaaa End editing Edited EST: N23461, type: ag Aligns to: chr9:12713113-12713611 (++) All mismatches: ag (411), ag (414), ag (440), ag (444), ag (448), ag (453), ag (465), ag (467), ag (473), ag (474), ag (483), ag (485), ag (491), ag (493), Editing mismatches: 14, all mismatches: 14, alignment length: 500, cluster length: 82, total number of As: 25 Locations in RNA: 411 414 440 444 448 453 465 467 473 474 483 485 491 493 Locations in genome: 12713523 12713526 12713552 12713556 12713560 12713565 12713577 12713579 12713585 12713586 12713595 12713597 12713602 12713604 Upstream nucleotide (in genome): c t c c t c t t t a a t a t Upstream nucleotide summary: a: 3, c: 4, g: 0, t: 7, other: 0 Downstream nucleotide (in genome): c t t g t a t t a a t t t t Downstream nucleotide summary: a: 3, c: 1, g: 1, t: 9, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 2, ca: 1, cc: 1, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 6, other: 0 >chr9:12713113-12713611 (+) taaatttaaaaaatgtatctataaaccaagaacagagtctgatatgaaatagacaaactttaataaggaaaaatgcaaaatccggtagttaaaaagcatgatggcaaaactgaagggtagaaggaggcaggagtttttgcaaaataaccagggaattttaatttcaaattaaatataagccaatagtgcaatgcaaccgataaagggaaaaatcaaatacaactgatcaagttggaaaacagtgagctattgggcttcattaatccacaaaaggaaatatgtggtaaagttggaatcacacctggcctatttatacaactttcaggccacacattaaggggaacattggcaaactgatcttctgcctggatgttttatccattattaaaaggggaatattgaagtctaccactattattgtattgctgtcaatttctccattcagatatgtcaatatttgctttatatatttaaatgctctaata-ttgaatatgtatat >N23461:1-500 (+) taaatttaaaaaatgtatctataaaccaagaacagagtctgatatgaaatagacaaactttaataaggaaaaatgcaaaatccggtagttaaaaagcatgatggcaaaactgaagggtagaaggaggcaggagtttttgcaaaataaccagggaattttaatttcaaattaaatataagccaatagtgcaatgcaaccgataaagggaaaaatcaaatacaactgatcaagttggaaaacagtgagctattgggcttcattaatccacaaaaggaaatatgtggtaaagttggaatcacacctggcctatttatacaactttcaggccacacattaaggggaacattggcaaactgatcttctgcctggatgttttatccattattaaaaggggaatattgaagtctaccgctgttattgtattgctgtcaatttctccgttcggatgtgtcgatatttgctttgtgtatttggatgctctagtggttgagtgtgtatat End editing Edited EST: DA324841, type: ag Aligns to: chr9:134383631-134383917 (++) All mismatches: ag (79), ag (102), ag (104), ag (112), ag (117), ag (126), ag (138), ag (181), ag (190), ag (194), ag (200), ag (233), Editing mismatches: 12, all mismatches: 12, alignment length: 287, cluster length: 155, total number of As: 44 Locations in RNA: 79 102 104 112 117 126 138 181 190 194 200 233 Locations in genome: 134383709 134383732 134383734 134383742 134383747 134383756 134383768 134383811 134383820 134383824 134383830 134383863 Upstream nucleotide (in genome): a a c a c t a c g c a g Upstream nucleotide summary: a: 5, c: 4, g: 2, t: 1, other: 0 Downstream nucleotide (in genome): g c t c t a t g g g t g Downstream nucleotide summary: a: 1, c: 2, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 2, ca: 0, cc: 0, cg: 2, ct: 2, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr9:134383631-134383917 (+) ataaataagccgggcacggtggctcacacctgtaatcccagcactttgggaggctgaggcgggtggatcacaaggtcaagagatcgagaccatccgggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggcatggtggcacccaccttttgtcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagattgtaccactgcactccagcctggtgacagaacaagactctgtctca >DA324841:1-287 (+) ataaataagccgggcacggtggctcacacctgtaatcccagcactttgggaggctgaggcgggtggatcacaaggtcaggagatcgagaccatccgggccagcgtggtgaagccccgtctctactgaaaatacaaaagttagctgggcatggtggcacccaccttttgtcccagctactcgggaggctggggcgggagagtcgcttgaacccgggaggcggaggttgcagtgggccgagattgtaccactgcactccagcctggtgacagaacaagactctgtctca End editing Edited EST: DA120523, type: ag Aligns to: chr9:131089628-131090102 (++) All mismatches: ag (16), ag (27), ag (36), ag (40), ag (50), ag (52), ct (64), ag (83), ag (188), ag (196), ag (203), ag (232), ag (242), ag (251), ag (253), ag (256), ag (266), ag (268), ag (292), ag (293), ag (294), ag (299), ag (302), ag (305), ag (309), ag (310), ag (323), ag (325), ag (329), ag (331), ag (376), ag (381), ag (399), ag (409), ag (411), ag (417), ag (441), ag (442), Editing mismatches: 37, all mismatches: 38, alignment length: 475, cluster length: 427, total number of As: 128 Locations in RNA: 16 27 36 40 50 52 83 188 196 203 232 242 251 253 256 266 268 292 293 294 299 302 305 309 310 323 325 329 331 376 381 399 409 411 417 441 442 Locations in genome: 131089643 131089654 131089663 131089667 131089677 131089679 131089710 131089815 131089823 131089830 131089859 131089869 131089878 131089880 131089883 131089893 131089895 131089919 131089920 131089921 131089926 131089929 131089932 131089936 131089937 131089950 131089952 131089956 131089958 131090003 131090008 131090026 131090036 131090038 131090044 131090068 131090069 Upstream nucleotide (in genome): a c c g c c g c t a c c g g c a c a a a a a t c a t t c t g c g c c t c a Upstream nucleotide summary: a: 10, c: 15, g: 6, t: 6, other: 0 Downstream nucleotide (in genome): c c g g c c g t a t c g g c g c t a a t a t g a g t c t g g g g c c c a g Downstream nucleotide summary: a: 6, c: 11, g: 13, t: 7, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 2, at: 3, ca: 2, cc: 6, cg: 4, ct: 3, ga: 0, gc: 1, gg: 5, gt: 0, ta: 1, tc: 2, tg: 2, tt: 1, other: 0 >chr9:131089628-131090102 (+) aggagaattgattgaacccgggaggcacaggttgcagtgagctgagatcacaccactgcactccagcctgggcgacagagtgagactctgtctccaacaaaacaaaacaaaaaaattcatataaaaatacaggtaaaatgtttcaagtaattagaatattctggcactggtccatgcgtgttggctcatgcctgtaatcctaatactttggggggctgaagtgggcggatcacttgagcccaggagtttgagaccagcctggacaacatggtgaaaccctgtctctgcaaaaaatgcaaaaattagccaagtgtggtggtgtatacccatagtcccagctacctgggagggagtttgaggtaggaggatcagttgagcccaggaggtcgagggcggtgagccgtaatcacaccactacactccagcttggacaacagagcaagactctgtctcaaaaataaaaaaaagtatacca >DA120523:1-475 (+) aggagaattgattgagcccgggaggcgcaggttgcggtgggctgagatcgcgccactgcactctagcctgggcgacagagtgggactctgtctccaacaaaacaaaacaaaaaaattcatataaaaatacaggtaaaatgtttcaagtaattagaatattctggcactggtccatgcgtgttggctcgtgcctgtgatcctagtactttggggggctgaagtgggcggatcgcttgagcccgggagtttggggccggcctggacagcgtggtgaaaccctgtctctgcaaagggtgcagaagttggccgggtgtggtggtgtgtgcccgtggtcccagctacctgggagggagtttgaggtaggaggatcagttgggcccgggaggtcgagggcggtgggccgtantcgcgccactgcactccagcttggacaacagagcgggactctgtctcaaaaataaaaaaaagtatacca End editing Edited EST: DB156693, type: ag Aligns to: chr9:86239692-86240221 (++) All mismatches: ag (12), ac (13), ag (18), ag (37), ag (38), ag (41), ag (42), ag (63), ag (79), ag (99), ag (103), ag (104), ag (119), ag (139), ag (159), ag (200), ag (201), ag (213), Editing mismatches: 17, all mismatches: 18, alignment length: 530, cluster length: 202, total number of As: 44 Locations in RNA: 12 18 37 38 41 42 63 79 99 103 104 119 139 159 200 201 213 Locations in genome: 86239703 86239709 86239728 86239729 86239732 86239733 86239754 86239770 86239790 86239794 86239795 86239810 86239830 86239850 86239891 86239892 86239904 Upstream nucleotide (in genome): c a c a c a t t c t a t c c a a t Upstream nucleotide summary: a: 6, c: 6, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): a c a g a t a g g a t g t a a g c Downstream nucleotide summary: a: 7, c: 2, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 2, ca: 4, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 2, tt: 0, other: 0 >chr9:86239692-86240221 (+) aatcttggctcaatgcaacctcctcctcccgggttcaagcaattctcctgcctcaggctcctaagtagctgggattataggcgcccaccaccatgcacagctaattttttgtatttttagtagagacggggtttcatcatgttggcgaggctggtctcaaactcctgacctcaggtgatccatgcgtctcagcctcccaaagtgcagggattacaggcgtgagccaccgcgcccagctaaggcttggcttctttaaggagcaggaaggaacccattgtggctgagtgaggggaagcatgatgggagatgaagtcagaaacaatgcaggtaaagagaatgtggtcatatgctggcaatattttgaaggtagagtcagaaagatgtgtttgtggactggatgttgggtgtaagaagacaagagagaagtcaaggatgattcaagattttaggcctgagtaattggaaggagggagtcgccacaaactgatttggggaagcagtagatagagcagatttggaagacaacctca >DB156693:1-530 (+) aatcttggctcgctgcagcctcctcctcccgggttcgggcggttctcctgcctcaggctcctgagtagctgggattatgggcgcccaccaccatgcacggctggttttttgtatttttggtagagacggggtttcatcgtgttggcgaggctggtctcgaactcctgacctcaggtgatccatgcgtctcagcctcccagggtgcagggattgcaggcgtgagccaccgcgcccagctaaggcttggcttctttaaggagcaggaaggaacccattgtggctgagtgaggggaagcatgatgggagatgaagtcagaaacaatgcaggtaaagagaatgtggtcatatgctggcaatattttgaaggtagagtcagaaagatgtgtttgtggactggatgttgggtgtaagaagacaagagagaagtcaaggatgattcaagattttaggcctgagtaattggaaggagggagtcgccacaaactgatttggggaagcagtagatagagcagatttggaagacaacctca End editing Edited EST: DB093629, type: ag Aligns to: chr9:102865304-102865851 (++) All mismatches: ag (15), ag (54), ag (66), ag (94), ag (106), ag (108), ag (162), ag (190), ag (195), ag (251), ag (256), ag (272), ag (278), ag (350), ag (351), ag (372), ag (381), ag (386), ag (396), ag (419), ag (420), ag (447), ag (449), ag (451), ag (455), ag (456), ag (460), ag (471), ag (476), ag (484), ag (486), ag (487), ag (492), ag (496), ag (500), ag (513), ag (527), ag (539), Editing mismatches: 38, all mismatches: 38, alignment length: 548, cluster length: 525, total number of As: 122 Locations in RNA: 15 54 66 94 106 108 162 190 195 251 256 272 278 350 351 372 381 386 396 419 420 447 449 451 455 456 460 471 476 484 486 487 492 496 500 513 527 539 Locations in genome: 102865318 102865357 102865369 102865397 102865409 102865411 102865465 102865493 102865498 102865554 102865559 102865575 102865581 102865653 102865654 102865675 102865684 102865689 102865699 102865722 102865723 102865750 102865752 102865754 102865758 102865759 102865763 102865774 102865779 102865787 102865789 102865790 102865795 102865799 102865803 102865816 102865830 102865842 Upstream nucleotide (in genome): t a c a t c c c a c c t t t a c c c c c a a a t a a t g c t t a c t g c g c Upstream nucleotide summary: a: 10, c: 15, g: 3, t: 10, other: 0 Downstream nucleotide (in genome): g c g g c g g t t c g g c a t a g c g a c a t c a c g t g t a t g c g g g g Downstream nucleotide summary: a: 6, c: 9, g: 16, t: 7, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 1, at: 4, ca: 2, cc: 2, cg: 10, ct: 1, ga: 0, gc: 0, gg: 2, gt: 1, ta: 2, tc: 4, tg: 3, tt: 1, other: 0 >chr9:102865304-102865851 (+) tttgtatttttagtagagacacagtttcgccatgttggccacgctggtctcgaactcctgacctcaggtgatctgcccgccttgccctcccaaagtgctgggattacaggcgtgagccatcacacccggccttaactaatttttttatttttttctgagtcagggtctcaacctgttgcccagtctggcatgcaatggtgtgatctcagctcactgcaaaccctgtttctcaggttcaagtgaaacttccacctcagcctcccgagtagctaggattacagtgcatgccaccatgctcagctaatttttaaaaacttttggtaggcagggcatggtggcttatgcctgtaatcccagcactttgggatgccaaggtgggcagatcacttgagatcaggagttcgagaccagcctggccaacatggtgaaaccccgtcgctactaaaaaatacaaaacttagccggtcgtgatggcaggtgcctataatcccagctactgaggaggctgaggcaggagacttgcttgagccctggaggcagaggctgca >DB093629:1-548 (+) tttgtatttttagtggagacacagtttcgccatgttggccacgctggtctcgagctcctgacctcgggtgatctgcccgccttgccctcccaaggtgctgggattgcgggcgtgagccatcacacccggccttaactaatttttttatttttttctgagtcggggtctcaacctgttgcccagtctggcgtgcagtggtgtgatctcagctcactgcaaaccctgtttctcaggttcaagtgaaacttccgcctcggcctcccgagtagctgggattgcagtgcatgccaccatgctcagctaatttttaaaaacttttggtaggcagggcatggtggcttatgcctgtggtcccagcactttgggatgccgaggtgggcggatcgcttgagatcgggagttcgagaccagcctggccggcatggtgaaaccccgtcgctactaaagagtgcaaggcttggccggtcgtggtggcgggtgcctgtggtcccggctgctggggaggctgaggcgggagacttgcttgggccctggaggcggaggctgca End editing Edited EST: DW425427, type: ag Aligns to: chr9:130557328-130557565 (++) All mismatches: ag (18), ag (56), ag (68), ag (71), ag (72), ag (79), ag (80), ag (81), ag (86), ag (123), ag (139), ag (142), ag (154), ag (165), ag (190), ag (193), ag (198), ag (215), ct (232), ag (239), ga (249), ag (251), Editing mismatches: 20, all mismatches: 22, alignment length: 238, cluster length: 234, total number of As: 74 Locations in RNA: 18 56 68 71 72 79 80 81 86 123 139 142 154 165 190 193 198 215 239 251 Locations in genome: 130557329 130557367 130557379 130557382 130557383 130557390 130557391 130557392 130557397 130557434 130557450 130557453 130557465 130557476 130557501 130557504 130557509 130557526 130557550 130557562 Upstream nucleotide (in genome): g a t t a c a a t a c g a c c c c c a a Upstream nucleotide summary: a: 8, c: 7, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g g c a a a a a g t g g c g c c c g a a Downstream nucleotide summary: a: 7, c: 5, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 5, ac: 1, ag: 1, at: 1, ca: 1, cc: 3, cg: 3, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr9:130557328-130557565 (+) gaggtcaggagttcgagaccagcctggctaagatgacgaagccccgtctctactaaaaatacaaaaattagccgggcgtgatggtgggcacctgtagtcccagttaattgggaggctgaggcaggagaatcacttgaacccgggaggcagaggttgcggtgagccggtatcacaccactgcactccagcctgggcaacagagcgagactccgtctcaaaaaaaaaaaaaaaagaaaaa >DW425427:17-254 (+) ggggtcaggagttcgagaccagcctggctaagatgacgaggccccgtctctgctggaaatacgggaattggccgggcgtgatggtgggcacctgtagtcccagttagttgggaggctgaggcgggggaatcacttgagcccgggaggcggaggttgcggtgagccggtatcacgccgctgcgctccagcctgggcaacggagcgagactccgtcttaaaaaagaaaaaaaaaaagaaa End editing Edited EST: DW430647, type: ag Aligns to: chr9:125668559-125668813 (++) All mismatches: ag (38), ag (58), ag (65), ag (82), ag (86), ag (108), ag (112), ag (115), ag (121), ag (141), ag (147), ag (148), ag (153), ag (157), ct (160), ag (174), ag (180), ag (188), ag (189), ag (209), ag (213), ag (218), Editing mismatches: 21, all mismatches: 22, alignment length: 256, cluster length: 181, total number of As: 49 Locations in RNA: 38 58 65 82 86 108 112 115 121 141 147 148 153 157 174 180 188 189 209 213 218 Locations in genome: 125668580 125668600 125668607 125668624 125668628 125668650 125668654 125668657 125668663 125668683 125668689 125668690 125668695 125668699 125668716 125668722 125668730 125668731 125668751 125668755 125668760 Upstream nucleotide (in genome): a c t a t a t a t c t a c t c a g a c g g Upstream nucleotide summary: a: 7, c: 5, g: 3, t: 6, other: 0 Downstream nucleotide (in genome): g g g c g a c a g c a t g c g t a c g g g Downstream nucleotide summary: a: 4, c: 5, g: 10, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 1, at: 2, ca: 0, cc: 1, cg: 4, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 1, tc: 2, tg: 3, tt: 0, other: 0 >chr9:125668559-125668813 (+) accagcactttgggaggccgaagcgggtggaccgccaggtcagaagttagagaccagtctggccaacatagtgaaaccctggctctactaaaaatacaaaaattagccgggtgtggtggcgggcacctgtaatcccagctactcggggggctgaggcaggagaatcacttgaacccgggagacggaggttgcagtgagccgagaccgcgccattgcactacagccaggcggggggg-cagtgccagactccgtctc >DW430647:17-272 (+) accagcactttgggaggccgaggcgggtggaccgccaggtcggaagttggagaccagtctggccagcatggtgaaaccctggctctactaagaatgcagaaattggccgggtgtggtggcgggcgcctgtggtcccggctgcttggggggctgaggcgggagagtcacttgggcccgggagacggaggttgcggtgggccgggaccgcgccattgcactacagccaggcggggggggcagtgccagactccgtctc End editing Edited EST: DW462765, type: ag Aligns to: chr9:37862980-37863330 (++) All mismatches: ag (106), ag (107), ag (112), ct (126), ag (142), ag (145), ag (150), ag (159), ag (173), ag (174), ag (176), ag (184), ag (189), ag (195), ag (198), ag (199), ag (202), ag (204), ag (210), ag (213), ag (233), ag (239), ag (240), ag (245), ag (249), ag (253), ag (267), ag (269), ag (272), ag (275), ag (280), ag (281), ag (288), ag (292), ag (304), ag (305), ag (310), ag (320), ag (335), ag (344), Editing mismatches: 39, all mismatches: 40, alignment length: 350, cluster length: 239, total number of As: 68 Locations in RNA: 106 107 112 142 145 150 159 173 174 176 184 189 195 198 199 202 204 210 213 233 239 240 245 249 253 267 269 272 275 280 281 288 292 304 305 310 320 335 344 Locations in genome: 37863069 37863070 37863075 37863105 37863108 37863113 37863122 37863136 37863137 37863139 37863147 37863152 37863158 37863161 37863162 37863165 37863167 37863173 37863176 37863196 37863202 37863203 37863208 37863212 37863216 37863230 37863232 37863235 37863238 37863243 37863244 37863251 37863255 37863267 37863268 37863273 37863283 37863298 37863307 Upstream nucleotide (in genome): t a c c a c g c a c a c t t a a t a t c t a c t c a g a c g a g c t a g c t g Upstream nucleotide summary: a: 12, c: 12, g: 6, t: 9, other: 0 Downstream nucleotide (in genome): a t g c g g g a c t c t c a a t c t g c a t g c g g g t c a c g g a g g c g g Downstream nucleotide summary: a: 7, c: 10, g: 15, t: 7, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 3, at: 5, ca: 1, cc: 4, cg: 5, ct: 2, ga: 1, gc: 0, gg: 5, gt: 0, ta: 4, tc: 3, tg: 2, tt: 0, other: 0 >chr9:37862980-37863330 (+) gagggtctcgggattgcaggttgaaaaacacaaccttaatcagcagtaaattcttctctactcggccaggcgcagtggctcatgcctgtaatcccagcactttgggaggccgaggtgggtggatcacaaggtcaggagttcgagaccagcctgaccaacatggtgaaacgccatctctactaaaaatacaaaaattagccgggcgtggtggtgctcacctgtaatcccagctacccaggaggctgaggcaagagaatcacttgaacccgggaggcagagggtgcagtaagccgagattgcaccactgcactccagcctaggcgacagagcgagactctgtctcaaaaaaaa >DW462765:17-366 (+) gagggtctcgggattgcaggttgaaaaacacaaccttaatcagcagtaaattcttctctactcggccaggcgcagtggctcatgcctgtggtcccggcactttgggaggtcgaggtgggtggatcgcagggtcgggagttcgggaccagcctgaccggcgtggtgaagcgccgtctctgctggaagtgcaaaagttggccgggcgtggtggtgctcgcctgtggtcccggctgcccgggaggctgaggcaggggagtcgcttgggcccggggggcggagggtgcagtgggccgggattgcaccgctgcactccagcctgggcgacagggcgagactctgtc-caaaaaaaa End editing Edited EST: BX090705, type: ag Aligns to: chr9:12713217-12713946 (++) All mismatches: ag (310), ag (344), ag (349), ag (361), ag (369), ag (370), ag (371), ag (379), ag (381), ag (386), ag (392), ag (394), ag (436), ag (443), ag (444), ag (446), ag (528), ag (559), ag (589), tg (657), Editing mismatches: 19, all mismatches: 20, alignment length: 731, cluster length: 280, total number of As: 76 Locations in RNA: 310 344 349 361 369 370 371 379 381 386 392 394 436 443 444 446 528 559 589 Locations in genome: 12713526 12713560 12713565 12713577 12713585 12713586 12713587 12713595 12713597 12713602 12713608 12713610 12713652 12713659 12713660 12713662 12713744 12713775 12713805 Upstream nucleotide (in genome): t t c t t a a a t a t t t t a t t c a Upstream nucleotide summary: a: 6, c: 2, g: 0, t: 11, other: 0 Downstream nucleotide (in genome): t t a t a a t t t t t t t a t a c c a Downstream nucleotide summary: a: 6, c: 2, g: 0, t: 11, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 4, ca: 1, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 3, tc: 1, tg: 0, tt: 7, other: 0 >chr9:12713217-12713946 (+) caaaactgaagggtagaaggaggcaggagtttttgcaaaataaccagggaattttaatttcaaattaaatataagccaatagtgcaatgcaaccgataaagggaaaaatcaaatacaactgatcaagttggaaaacagtgagctattgggcttcattaatccacaaaaggaaatatgtggtaaagttggaatcacacctggcctatttatacaactttcaggccacacattaaggggaacattggcaaactgatcttctgcctggatgttttatccattattaaaaggggaatattgaagtctaccactattattgtattgctgtcaatttctccattcagatatgtcaatatttgctttatatatttaaatgctctaatattgaatatgtatatacttataattgttatatcttcttactgaattgatcattttatcatataataacctttatctctagagacaattttcaattttaagtctgttttgcctgacataaatatagccatttctgctttctttttgttaccattttggaatatctttttctatcttgtcactttcagcctatgtgtatctttacatctaaagtgagtttcttgtagatagcaagtcactggatcttgttttcttcataattcagtcttgacgtattgttatattagttcattttcacagtgctataaagaaatacccaagactaggtaatttataaagg-aaagaagtttaa >BX090705:1-731 (+) caaaactgaagggtagaaggaggcaggagtttttgcaaaataaccagggaattttaatttcaaattaaatataagccaatagtgcaatgcaaccgataaagggaaaaatcaaatacaactgatcaagttggaaaacagtgagctattgggcttcattaatccacaaaaggaaatatgtggtaaagttggaatcacacctggcctatttatacaactttcaggccacacattaaggggaacattggcaaactgatcttctgcctggatgttttatccattattaaaaggggaatattgaagtctaccactgttattgtattgctgtcaatttctccattcagatgtgtcgatatttgctttgtatatttgggtgctctagtgttgagtatgtgtgtacttataattgttatatcttcttactgaattgatcattttgtcatatggtgacctttatctctagagacaattttcaattttaagtctgttttgcctgacataaatatagccatttctgctttctttttgttgccattttggaatatctttttctatcttgtcgctttcagcctatgtgtatctttacatctagagtgagtttcttgtagatagcaagtcactggatcttgttttcttcataattcagtcttgacgtattggtatattagttcattttcacagtgctataaagaaatacccaagactaggtaatttataaaggnaaagaagnttaa End editing Edited EST: BX114915, type: ag Aligns to: chr9:12711417-12712197 (++) All mismatches: ag (35), ag (44), ag (48), ag (62), ag (70), ag (75), ag (81), ag (83), ag (84), ag (87), ag (104), ag (117), ag (150), ag (151), ag (154), ag (182), ag (183), ag (208), ag (224), ag (228), ag (252), ag (256), ag (258), ag (259), ag (262), ag (268), ag (275), ag (277), ag (279), ag (286), ag (289), ag (298), ag (302), ag (306), ag (307), ag (311), ag (312), ag (313), ag (330), ag (336), ag (337), ag (347), ag (349), ag (360), ag (371), ag (387), ag (388), ag (396), ag (397), ta (531), ga (741), Editing mismatches: 49, all mismatches: 51, alignment length: 781, cluster length: 363, total number of As: 166 Locations in RNA: 35 44 48 62 70 75 81 83 84 87 104 117 150 151 154 182 183 208 224 228 252 256 258 259 262 268 275 277 279 286 289 298 302 306 307 311 312 313 330 336 337 347 349 360 371 387 388 396 397 Locations in genome: 12711451 12711460 12711464 12711478 12711486 12711491 12711497 12711499 12711500 12711503 12711520 12711533 12711566 12711567 12711570 12711598 12711599 12711624 12711640 12711644 12711668 12711672 12711674 12711675 12711678 12711684 12711691 12711693 12711695 12711702 12711705 12711714 12711718 12711722 12711723 12711727 12711728 12711729 12711746 12711752 12711753 12711763 12711765 12711776 12711787 12711803 12711804 12711812 12711813 Upstream nucleotide (in genome): a c g a c t t a a t t a a a a a a t t t a t t a a a t c t t c t t c a c a a a a a a t t a t a a a Upstream nucleotide summary: a: 25, c: 6, g: 1, t: 17, other: 0 Downstream nucleotide (in genome): c g c g c g a a a c a g a g a a t g t a g t a c t a c t t t g a t a a a a t g a t t c g t a t a c Downstream nucleotide summary: a: 18, c: 8, g: 10, t: 13, other: 0 Dinucleotide summary: aa: 10, ac: 3, ag: 5, at: 7, ca: 2, cc: 1, cg: 2, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 6, tc: 3, tg: 3, tt: 5, other: 0 >chr9:12711417-12712197 (+) taagaatgcttaaagtagctgagtgaatcaaaaaacatgatccagtgacttgctgtctataagagactcactttagatttaaaaatacatataggctggaagtaaagagatggaaaaggatattatgaaaatggtaaaaagaaaaaaaaaagaaagcaggggaggctatcctatcagacaaaatagacaaagtcaaaaacttcctctagaggtgaagttcattatataataataaaagggtcaatttaacaagatataacaattgtaaatatatacatattcaatatcagagcacttaaatatacaaagcaaatgttgatagatctgaaaggagaaattgatatcaatacaatactagtagtagaatctaatattccactttcaataatgtataaaacatccaggtaggagatctataaagaaagagagtacttgaacaacactgtacaccagttggactttagggacatatacattacataccactcaacagcagcagaatattcttatacttcagcaacatgttcttctcaaacacaggtggaacatactccaggataaattacatcagacctcaaaacaagtccccccaacattaaaaagataaaagtcatttcaaagatcttttaagatcacaattgagtaaaattagaaatcaatagtgcaagaaagtgggaaattcacaatgacgaaaaaacaatacactcttaaataaccattgggtcaattaggaaatcatagaggaatttaaattatatctcaaggcaagtgaaaacaaaaa >BX114915:1-781 (+) taagaatgcttaaagtagctgagtgaatcaaaaagcatgatccggtggcttgctgtctataggagactcgctttggatttgaggatgcatataggctggaagtgaagagatggaaagggatattatgaaaatggtaaaaagaaaaaaaagggagagcaggggaggctatcctatcagacaaggtagacaaagtcaaaaacttcctctggaggtgaagttcattgtatgataataaaagggtcaatttaacaggatgtggcagttgtagatatatgcgtgttcaatgtcggagcacttgaatgtacggagcgggtgttgatagatctgaagggagaggttgatatcagtgcaatactagtggtagaatctagtattccactttcaatggtgtataaggcatccaggtaggagatctataaagaaagagagtacttgaacaacactgtacaccagttggactttagggacatatacattacataccactcaacagcagcagaatattcttatacttcagcaacatgttcttcacaaacacaggtggaacatactccaggataaattacatcagacctcaaaacaagtccccccaacattaaaaagataaaagtcatttcaaagatcttttaagatcacaattgagtaaaattagaaatcaatagtgcaagaaagtgggaaattcacaatgacgaaaaaacaatacactcttaaataaccattgggtcaattaggaaatcataaaggaatttaaattatatctcaaggcaagtgaaaacaaaaa End editing Edited EST: BX485875, type: ga Aligns to: chr9:79880437-79880747 (++) All mismatches: ga (72), ga (74), ga (97), ga (101), ga (104), ga (109), ga (121), ga (136), ga (148), ga (150), ga (154), ga (180), ga (192), ga (205), ga (297), Editing mismatches: 15, all mismatches: 15, alignment length: 311, cluster length: 226, total number of Gs: 40 Locations in RNA: 72 74 97 101 104 109 121 136 148 150 154 180 192 205 297 Locations in genome: 79880505 79880507 79880530 79880534 79880537 79880542 79880554 79880569 79880581 79880583 79880587 79880613 79880625 79880638 79880730 Upstream nucleotide (in genome): g t a t a t g a t t t a a t a Upstream nucleotide summary: a: 6, c: 0, g: 2, t: 7, other: 0 Downstream nucleotide (in genome): t t t t t t t c t t t t t t t Downstream nucleotide summary: a: 0, c: 1, g: 0, t: 14, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 5, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 2, ta: 0, tc: 0, tg: 0, tt: 7, other: 0 >chr9:79880437-79880747 (+) ttgagagggtgtatgtgtccaggaatttatccatttcttctagatttttgtagtttatttgtgtagaggtgtttatagtattctctgatagtagtttgtagttctgtggaatcagtggtgatatcctctttagcattttttattgtgtctgtttgattcttctcttttctttattagtctggctagcagtctatgtattttgttaatcttttcaaaaaaccagcacctggattcactgatatttttgaagggtttttcgtgtctctatctccttcatttctgctctgatcttagttatttcttgtcttctg >BX485875:4-314 (+) ttgagagggtgtatgtgtccaggaatttatccatttcttctagatttttgtagtttatttgtgtagagatatttatagtattctctgatagtaatttataattctatggaatcagtgatgatatcctctttaacattttttattatatctatttgattcttctcttttctttattaatctggctagcaatctatgtatttnattaatcttttcaaaaaaccagcacctggattcactgatatttttnaagggtttttcgtgtctctatctccttcatttctgctctgatcttaattatttcttgtcttctg End editing Edited EST: BX377742, type: ga Aligns to: chr9:139557380-139557560 (++) All mismatches: ga (32), ga (66), ga (87), ga (89), ga (95), ga (97), ga (104), ga (108), ga (127), ga (133), ga (140), ga (143), ga (145), ga (160), ga (164), ga (165), ga (166), ga (172), ga (175), ga (181), Editing mismatches: 20, all mismatches: 20, alignment length: 181, cluster length: 150, total number of Gs: 53 Locations in RNA: 32 66 87 89 95 97 104 108 127 133 140 143 145 160 164 165 166 172 175 181 Locations in genome: 139557411 139557445 139557466 139557468 139557474 139557476 139557483 139557487 139557506 139557512 139557519 139557522 139557524 139557539 139557543 139557544 139557545 139557551 139557554 139557560 Upstream nucleotide (in genome): a a a t t a a a a a a a c c t g g a a a Upstream nucleotide summary: a: 13, c: 2, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g g t g a g c g t g c c g c g g c c c n Downstream nucleotide summary: a: 1, c: 7, g: 9, t: 2, other: 1 Dinucleotide summary: aa: 0, ac: 5, ag: 5, at: 2, ca: 0, cc: 1, cg: 1, ct: 0, ga: 0, gc: 1, gg: 1, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 1 >chr9:139557380-139557560 (+) caccaagctggccctgcacggctgcaagggaggctcctgtggacaggccaggcaggtgggcctcaggaggtgcctccaggcggccagtgggcctgaggccccagcaagggctagggtccatctccagtcccaggacacagcagcggccaccatggccacgcctgggctccagcagcatcag >BX377742:1-181 (+) caccaagctggccctgcacggctgcaaggraagctcctgtggacaggccaggcaggtgggcctcaagaggtncctccanncggccaataggcctaaagccccaacaaaggctagggtccatctccaatcccaagacacaacaacagccaccatggccacacctaaactccaacaacatcaa End editing Edited EST: AW674473, type: ga Aligns to: chr9:135895659-135896132 (++) All mismatches: gt (147), ga (159), ga (163), ga (168), ga (176), ga (179), ga (181), ga (182), ga (187), ga (190), ga (193), ga (194), ga (196), ga (208), ga (219), ga (220), ga (229), ga (230), ga (238), ag (242), ga (243), ga (244), ga (246), ga (255), ga (275), ga (277), ga (280), ga (281), ga (286), ga (292), ga (297), ga (298), ga (302), tc (308), ga (310), ga (319), ga (323), ga (331), ga (334), ag (341), ga (342), ga (343), ga (352), gt (364), ga (375), ga (379), ga (383), ga (399), ga (403), ga (404), ga (409), gt (412), ga (418), ga (426), ga (427), ga (434), ga (438), ga (445), ga (447), ga (452), ga (454), Editing mismatches: 55, all mismatches: 61, alignment length: 474, cluster length: 297, total number of Gs: 81 Locations in RNA: 159 163 168 176 179 181 182 187 190 193 194 196 208 219 220 229 230 238 243 244 246 255 275 277 280 281 286 292 297 298 302 310 319 323 331 334 342 343 352 375 379 383 399 403 404 409 418 426 427 434 438 445 447 452 454 Locations in genome: 135895817 135895821 135895826 135895834 135895837 135895839 135895840 135895845 135895848 135895851 135895852 135895854 135895866 135895877 135895878 135895887 135895888 135895896 135895901 135895902 135895904 135895913 135895933 135895935 135895938 135895939 135895944 135895950 135895955 135895956 135895960 135895968 135895977 135895981 135895989 135895992 135896000 135896001 135896010 135896033 135896037 135896041 135896057 135896061 135896062 135896067 135896076 135896084 135896085 135896092 135896096 135896104 135896106 135896111 135896113 Upstream nucleotide (in genome): t t a c c t g c t t g t t t g t g t a g t t a c c g t t t g t g t t t t a g t t a g a t g t t t g g a t t a a Upstream nucleotide summary: a: 9, c: 5, g: 13, t: 28, other: 0 Downstream nucleotide (in genome): t t g t t g c t c g t a a g a g c c g t a a c c g c c t g a c c c c c a g a a g a c t g t c t g t c c t t a c Downstream nucleotide summary: a: 11, c: 18, g: 12, t: 14, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 3, at: 1, ca: 0, cc: 1, cg: 1, ct: 3, ga: 3, gc: 6, gg: 0, gt: 4, ta: 6, tc: 8, tg: 8, tt: 6, other: 0 >chr9:135895659-135896132 (+) cctgttggccgagtggagactggtgttctcaaacccggtatggtggtcacctttgctccagtcaacgttacaacggaagtaaaatctgtcgaaatgcaccatgaagctttgagtgaagctcttcctggggacaatgtgggcttcaaggtcaagaatgtgtctgtcaaggatgttcgtcgtggcaacgttgctggtgacagcaaaaatgacccaccaatggaagcagctggcttcactgctcaggtgattatcctgaaccatccaggccaaataagcgccggctatgcccctgtattggattgccacatggctcacattgcatgcaagtttgctgagctgaaggaaaagattgatcgccgttctggtaaaaagctggaagatggccctaaattcttgaagtctggtgatgctgccattgttgatatggttcctggcaagcccatgtgtgttgagag-cttctcagactatccacct >AW674473:1-474 (+) cctgttggccgagtggagactggtgttctcaaacccggtatggtggtcacctttgctccagtcaacgttacaacggaagtaaaatctgtcgaaatgcaccatgaagctttgagtgaagctcttcctggggacaatgtgggcttcaatgtcaagaatgtatctatcaaagatgttcatcataacaacattactaataacagcaaaaataacccaccaataaaagcagctaacttcactactcgaataattatcctaaaccatccaggccaaataaacaccaactatacccctatattaaattaccacacgactcacattacatacaagtttactaagctgagaaaaaagattaatcgccgttcttgtaaaaagctagaaaatgaccctaaattcttgaaatctaatgatacttccattattgatataattcctgacaaacccat-tatattgaaaaacttctcagactatccacct End editing Edited EST: BF738223, type: ag Aligns to: chr9:140103454-140103759 (++) All mismatches: ag (28), ag (32), ag (42), ag (63), ag (88), ag (110), ag (120), ag (125), ag (155), ag (163), ag (164), ag (234), Editing mismatches: 12, all mismatches: 12, alignment length: 306, cluster length: 207, total number of As: 47 Locations in RNA: 28 32 42 63 88 110 120 125 155 163 164 234 Locations in genome: 140103458 140103462 140103472 140103493 140103518 140103540 140103550 140103555 140103585 140103593 140103594 140103664 Upstream nucleotide (in genome): c t t c t t g c c c a g Upstream nucleotide summary: a: 1, c: 5, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): a g c g g g t a g a a g Downstream nucleotide summary: a: 4, c: 1, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 3, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 1, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr9:140103454-140103759 (+) tcccaagtagatgggactacaggcgccgccaccacgcccagctaattttttgtatttttttagtagagatcgggtttcaccgtgttagccaggatgatctcaatctcctgacctcgtgatccacctgcctcagcctcccaaagtggtgggattacaggcgtgagccaccacacccggccaaaacttggcatgtttaattgctggcaggggagagacaggagaaagaggctgaagactgagtaggtatggcaggggatgtgcagcggcttgggggagagctgaacataggtcgaggggtctcagata >BF738223:24-329 (+) tcccgagtggatgggactgcaggcgccgccaccacgcccggctaattttttgtatttttttagtggagatcgggtttcaccgtgttggccaggatggtctcgatctcctgacctcgtgatccacctgcctcggcctcccggagtggtgggattacaggcgtgagccaccacacccggccaaaacttggcatgtttaattgctggcaggggggagacaggagaaagaggctgaagactgagtaggtatggcaggggatgtgcagcggcttgggggagagctgaacataggtcgaggggtctcagata End editing Edited EST: DB267100, type: ag Aligns to: chrX:57212802-57213274 (++) All mismatches: ag (6), ag (8), ag (22), ag (29), ag (68), ag (90), ag (93), ag (113), ag (122), ag (291), ag (299), ag (341), ag (348), ag (349), ag (363), ag (372), ag (375), ag (382), ag (385), ag (386), ag (394), ag (412), Editing mismatches: 22, all mismatches: 22, alignment length: 474, cluster length: 406, total number of As: 92 Locations in RNA: 6 8 22 29 68 90 93 113 122 291 299 341 348 349 363 372 375 382 385 386 394 412 Locations in genome: 57212807 57212809 57212823 57212830 57212869 57212891 57212894 57212914 57212923 57213091 57213099 57213141 57213148 57213149 57213163 57213172 57213175 57213182 57213185 57213186 57213194 57213212 Upstream nucleotide (in genome): g g t t t t t a a t a a t a t t a a a a c t Upstream nucleotide summary: a: 9, c: 1, g: 2, t: 10, other: 0 Downstream nucleotide (in genome): g g t c a t g a a t g g a a a t g g a g g t Downstream nucleotide summary: a: 7, c: 1, g: 9, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 5, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 3, tc: 1, tg: 1, tt: 5, other: 0 >chrX:57212802-57213274 (+) ttttgagaggtgtctgtacatatcccttacccatattttgatgttttttcttcttgtaaatttgtttaagttccttttagattcttgatattagacctttttcacatggataaattgcaaaaattttctcctattccatgtgttgcctgttcac-tttgataacagtttcttttgctgagcagaaactctttagtttaattagatcccacttgtcaattttggcttttgttgcaattgcttttgttgttttagtcatgaagtctttgcctatgtttatttgctgaatgatattgcctaagttttcttctagggttttgaaggttttaggtttcacatttaagtctttaaaccatcttgagttaatttttgtataaggtgtaagaaaggagtccagtttctgttttctgcatatggctagccagtctccccagcgccatttattaagtaaagaatcctttccccattgcttgttt >DB267100:1-474 (+) ttttggggggtgtctgtacatgtcccttgcccatattttgatgttttttcttcttgtaaatttgtttgagttccttttagattcttgatgttggacctttttcacatggatagattgcaaagattttctcctattccatgtgttgcctgttcacttttgataacagtttcttttgctgagcagaaactctttagtttaattagatcccacttgtcaattttggcttttgttgcaattgcttttgttgttttagtcatgaagtctttgcctatgtttatttgctgaatgatgttgcctaggttttcttctagggttttgaaggttttaggtttcacatttaggtctttggaccatcttgagttgatttttgtgtagggtgtaggaggggagtccggtttctgttttctgcatgtggctagccagtctccccagcgccatttattaagtaaagaatcctttccccattgcttgttt End editing Edited EST: DB260648, type: ag Aligns to: chrX:73229692-73229975 (++) All mismatches: ag (75), ag (83), ag (110), ag (151), ag (152), ag (167), ag (169), ag (177), ag (178), ag (180), ag (183), ag (269), ag (277), ag (278), Editing mismatches: 14, all mismatches: 14, alignment length: 284, cluster length: 204, total number of As: 52 Locations in RNA: 75 83 110 151 152 167 169 177 178 180 183 269 277 278 Locations in genome: 73229766 73229774 73229801 73229842 73229843 73229858 73229860 73229868 73229869 73229871 73229874 73229960 73229968 73229969 Upstream nucleotide (in genome): a c c a a a a a a a t c c a Upstream nucleotide summary: a: 9, c: 4, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): t c c a c a a a a t g g a g Downstream nucleotide summary: a: 6, c: 3, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 5, ac: 1, ag: 1, at: 2, ca: 1, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chrX:73229692-73229975 (+) atatgtggaaagacatctcatatttgtggactagaagatttaagcatcgctaggtgcggtggctcacgcctgtaatcccagcactttggtaggctgaggtgggcggatcacaaggtcgggagttcgagaccagcctggccaatatggtgaaaccccgtctctactaaaaatacaaaaaaattaggcgggtgtggtggcgcatgcctgtaatcccaatccctctaggctgaggcaggagaatctcttgatcccgggaggcggaggttgcagtgagccaagatcgg >DB260648:1-284 (+) atatgtggaaagacatctcatatttgtggactagaagatttaagcatcgctaggtgcggtggctcacgcctgtagtcccagcgctttggtaggctgaggtgggcggatcgcaaggtcgggagttcgagaccagcctggccaatatggtgaggccccgtctctactagagatacaaaggagttgggcgggtgtggtggcgcatgcctgtaatcccaatccctctaggctgaggcaggagaatctcttgatcccgggaggcggaggttgcggtgagccgggatcgg End editing Edited EST: DW427971, type: ag Aligns to: chrX:100412368-100412628 (++) All mismatches: ag (30), ag (31), ag (52), ag (53), ag (102), ag (104), tc (130), ag (157), ag (161), ag (177), ag (185), ta (188), ag (190), ag (203), ag (205), ag (208), ag (213), ag (217), ag (233), ag (240), ag (253), Editing mismatches: 19, all mismatches: 21, alignment length: 261, cluster length: 224, total number of As: 54 Locations in RNA: 30 31 52 53 102 104 157 161 177 185 190 203 205 208 213 217 233 240 253 Locations in genome: 100412381 100412382 100412403 100412404 100412453 100412455 100412508 100412512 100412528 100412536 100412541 100412554 100412556 100412559 100412564 100412568 100412584 100412591 100412604 Upstream nucleotide (in genome): t a c a t t c c t a g t c g t a g g a Upstream nucleotide summary: a: 5, c: 4, g: 4, t: 6, other: 0 Downstream nucleotide (in genome): a t a g t g t c c g g c t g g g g t c Downstream nucleotide summary: a: 2, c: 4, g: 8, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 3, at: 1, ca: 1, cc: 1, cg: 0, ct: 2, ga: 0, gc: 0, gg: 3, gt: 1, ta: 1, tc: 2, tg: 2, tt: 1, other: 0 >chrX:100412368-100412628 (+) gatgcatgcctgtaatcccagcactttgggaggccaaggtgggaggattgcgtgagcccaggagtttgagaccagccttggcaatatagtgtgatgctgtctttacataaaattttaaaaacttagctgggtttggtggcatgcacctgtgctctcagttacttgggaagttgaggtgggaggattacatgagcctaggaagtcaaggttgctgtgagctgtgattgctccattgaactctagcctgggtgacagagtgag >DW427971:17-277 (+) gatgcatgcctgtggtcccagcactttgggaggccggggtgggaggattgcgtgagcccaggagtttgagaccagccttggcaatgtggtgtgatgctgtctttacataaaatcttaaaaacttagctgggtttggtggcgtgcgcctgtgctctcagttgcttgggaggtaggggtgggaggattgcgtgggcctgggaggtcaaggttgctgtgggctgtggttgctccattgagctctagcctgggtgacagagtgag End editing Edited EST: DW434573, type: ag Aligns to: chrX:47018540-47018781 (++) All mismatches: ag (27), ag (30), ag (31), ag (45), ag (47), ag (61), ag (96), ag (102), ag (115), ag (124), ag (126), ag (131), ag (142), ag (164), ag (165), ag (174), ag (206), ag (229), ag (234), Editing mismatches: 19, all mismatches: 19, alignment length: 242, cluster length: 208, total number of As: 59 Locations in RNA: 27 30 31 45 47 61 96 102 115 124 126 131 142 164 165 174 206 229 234 Locations in genome: 47018550 47018553 47018554 47018568 47018570 47018584 47018619 47018625 47018638 47018647 47018649 47018654 47018665 47018687 47018688 47018697 47018729 47018752 47018757 Upstream nucleotide (in genome): c t a g g c g c c t a a c t a t a g g Upstream nucleotide summary: a: 5, c: 5, g: 5, t: 4, other: 0 Downstream nucleotide (in genome): g a t g g g c t t a a a g a t c c g g Downstream nucleotide summary: a: 5, c: 3, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 2, ca: 0, cc: 0, cg: 3, ct: 2, ga: 0, gc: 1, gg: 4, gt: 0, ta: 3, tc: 1, tg: 0, tt: 0, other: 0 >chrX:47018540-47018781 (+) ggcccatgccagtaatcccatcactttgagaggccgaggtgggcagatcacctgaggtagggagttcgagaccagcctgaccaacatggagaaacgccatctctactaaaaataaaaaattagccaggcgtggtggcacgtgcctgtaatcacagctactcgggaggctgaggcaggagaatctcttgaaccaggaggtggaggttgcggtgagccgagattgcaccattgcactccagcct >DW434573:17-258 (+) ggcccatgccggtggtcccatcactttggggggccgaggtgggcggatcacctgaggtagggagttcgagaccagcctggccaacgtggagaaacgccgtctctactgagaatagaaaattagccgggcgtggtggcacgtgcctgtggtcacagctgctcgggaggctgaggcaggagaatctcttgagccaggaggtggaggttgcggtgggccgggattgcaccattgcactccagcct End editing Edited EST: DW434870, type: ag Aligns to: chrX:9465208-9465449 (++) All mismatches: ag (15), ag (16), ag (17), ag (69), ag (79), ag (95), ag (96), ag (97), ag (101), ag (102), ag (105), ag (108), ag (255), Editing mismatches: 13, all mismatches: 13, alignment length: 242, cluster length: 241, total number of As: 64 Locations in RNA: 15 16 17 69 79 95 96 97 101 102 105 108 255 Locations in genome: 9465209 9465210 9465211 9465263 9465273 9465289 9465290 9465291 9465295 9465296 9465299 9465302 9465449 Upstream nucleotide (in genome): g a a a a a a a c a a t c Upstream nucleotide summary: a: 9, c: 2, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): a a g c c a a t a a t g n Downstream nucleotide summary: a: 6, c: 2, g: 2, t: 2, other: 1 Dinucleotide summary: aa: 4, ac: 2, ag: 1, at: 2, ca: 1, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 1 >chrX:9465208-9465449 (+) gaaagccgaggcgaggggttaacttgagcccaggggtttgagaccagcctgggcaacatggtgaaaccttgtctctacaaaaaatacaaaaattagctgggtgtggtgttgtgtgcctgtagtcccagctactagggaggctgaggcaggaaaatcacctgaacccaggaggtggaggttgcagtcaggcaccatcctgcgattgcactccagcctgggagacacagccagactccatctca >DW434870:14-255 (+) gggggccgaggcgaggggttaacttgagcccaggggtttgagaccagcctgggcagcatggtgaagccttgtctctacaaagggtacggaagttggctgggtgtggtgttgtgtgcctgtagtcccagctactagggaggctgaggcaggaaaatcacctgaacccaggaggtggaggttgcagtcaggcaccatcctgcgattgcactccagcctgggagacacagccagactccatctcg End editing Edited EST: CD521917, type: ag Aligns to: chrX:13709552-13709808 (++) All mismatches: ag (20), ag (23), ag (30), ag (65), ag (70), ag (72), ag (74), ag (77), ag (78), ag (83), ag (87), ag (109), ag (110), ag (142), ag (150), ag (151), ag (162), ag (182), ag (185), at (225), ga (259), Editing mismatches: 19, all mismatches: 21, alignment length: 258, cluster length: 166, total number of As: 48 Locations in RNA: 20 23 30 65 70 72 74 77 78 83 87 109 110 142 150 151 162 182 185 Locations in genome: 13709569 13709572 13709579 13709614 13709619 13709621 13709623 13709626 13709627 13709632 13709636 13709658 13709659 13709691 13709699 13709700 13709711 13709731 13709734 Upstream nucleotide (in genome): c g a t a a t a a t c t a a g a c g c Upstream nucleotide summary: a: 8, c: 4, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): g g a c a t c a a g g a t t a c g t c Downstream nucleotide summary: a: 6, c: 4, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 0, at: 3, ca: 0, cc: 1, cg: 3, ct: 0, ga: 1, gc: 0, gg: 1, gt: 1, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chrX:13709552-13709808 (+) gggcggatcacgaggtcaggagtttgaaaccagcctggccaacatggtgaaactccgtttctactaaaaatacaaaaattagccaggcgtggtggcggatgcccgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcagaggttgcagtgagccgagatcacgccattgcgctccagcctgggcaacagaatgagactccatctca-aaaaaaaaaaaaaaaaaaaaaaaaaaaga >CD521917:3-260 (+) gggcggatcacgaggtcgggggtttgagaccagcctggccaacatggtgaaactccgtttctgctaagagtgcaggaattggccgggcgtggtggcggatgcccgtggtcccagctactcaggaggctgaggcaggagagtcgcttgggcctgggaggcggaggttgcagtgagccgaggtcgcgccattgcgctccagcctgggcaacagaatgagactccttctcataaaaaaaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: AW239008, type: ga Aligns to: chrX:154255130-154255351 (++) All mismatches: ga (104), ga (135), ga (137), ga (147), ga (155), ga (157), ga (170), ga (172), ga (180), ga (182), ga (196), ga (205), ga (207), ga (217), ga (221), Editing mismatches: 15, all mismatches: 15, alignment length: 221, cluster length: 119, total number of Gs: 36 Locations in RNA: 104 135 137 147 155 157 170 172 180 182 196 205 207 217 221 Locations in genome: 154255233 154255264 154255266 154255276 154255284 154255286 154255299 154255301 154255309 154255311 154255325 154255334 154255336 154255346 154255351 Upstream nucleotide (in genome): c c c c c c c t c c c c c a a Upstream nucleotide summary: a: 2, c: 12, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): t c c g c c t t c a a c t g n Downstream nucleotide summary: a: 2, c: 6, g: 2, t: 4, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 2, cc: 6, cg: 1, ct: 3, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 1, other: 1 >chrX:154255130-154255351 (+) ctgagctctgtgatgtagccgcttgcggagactgcaagcagccgcggcgcgcccggccctccctcttccgctgccgccgtgggaatggaaacatctgccccacgtgccggaagccaagtggtggcgacaactgcgcgccactccgcggcctaccgcgcagatcctctacgtgtgtcctcgcgagacaagctcaccgaaatggccgcgtccagtcaaggtaag >AW239008:1-221 (+) ctgagctctgtgatgtagccgcttgcggagactgcaagcagccgcggcgcgcccggccctccctcttccgctgccgccgtgggaatggaaacatctgccccacatgccggaagccaagtggtggcgacaactgcacaccactccgcagcctaccacacagatcctctacatatgtcctcacaagacaagctcaccaaaatggccacatccantcaaag-aaa End editing Edited EST: AW664205, type: ga Aligns to: chrX:40794196-40794519 (++) All mismatches: ga (31), ga (72), ga (82), ga (103), ga (113), tc (118), ga (123), ga (127), ag (139), ga (159), ga (164), ga (171), ga (178), ga (188), ga (193), ga (202), ga (205), ga (211), ga (212), ga (214), ga (220), ga (225), ga (226), ga (230), ga (235), ga (244), ga (245), ga (248), ga (250), ga (253), ga (265), ga (293), ga (294), ga (299), ga (302), ga (305), ga (310), ga (319), Editing mismatches: 36, all mismatches: 38, alignment length: 324, cluster length: 289, total number of Gs: 96 Locations in RNA: 31 72 82 103 113 123 127 159 164 171 178 188 193 202 205 211 212 214 220 225 226 230 235 244 245 248 250 253 265 293 294 299 302 305 310 319 Locations in genome: 40794226 40794267 40794277 40794298 40794308 40794318 40794322 40794354 40794359 40794366 40794373 40794383 40794388 40794397 40794400 40794406 40794407 40794409 40794415 40794420 40794421 40794425 40794430 40794439 40794440 40794443 40794445 40794448 40794460 40794488 40794489 40794494 40794497 40794500 40794505 40794514 Upstream nucleotide (in genome): t c a c a t a a g a t a t a t t g c t a g g t g g t a t c a g a t g c t Upstream nucleotide summary: a: 11, c: 5, g: 8, t: 12, other: 0 Downstream nucleotide (in genome): t c a a t a g g g g t a g g g g c a c g g c c g c a g t a g c g c a a c Downstream nucleotide summary: a: 9, c: 9, g: 14, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 8, at: 1, ca: 4, cc: 1, cg: 0, ct: 0, ga: 1, gc: 4, gg: 3, gt: 0, ta: 2, tc: 4, tg: 3, tt: 3, other: 0 >chrX:40794196-40794519 (+) ttcacgcttaattcactttatttttcttgtgtaaaaaccctatgttgtagccacagctggagcctgagtccgctgcacggagactctggtgtgggtcttgacgaggtggtcagtgaattcctgatagggagacttggtaaatacagtctccttccagaggtcgggggtcaggtagctgtaggtcttagaaatggcatcaaaggtggccttggcgaagttgcccagggtggcagtgcagccccgggctgaggtgtagcagtcatcgataccagccatcataagcagcttcttaggcacaggtgcggagacgatgccagtgcccct >AW664205:1-324 (+) ttcacgcttaattcactttatttttcttgtataaaaaccctatgttgtagccacagctggagcctgagtccactgcacggaaactctggtgtgggtcttgacaaggtggtcaatgaactcctaataaggagacttggtgaatacantctccttccagaagtcgagggtcaagtanctataggtcttaaaaatagcatcaaaagtagccttaacaaagttacccaaagtgacagtacagccccgaactaaagtatagcagtcatcaataccagccatcataagcagcttcttaaacacaagtacgaagacaatgccantacccct End editing Edited EST: AA164669, type: ag Aligns to: chrX:54591182-54591623 (++) All mismatches: ag (17), ag (60), ag (66), ag (90), ag (115), ag (166), ag (171), ag (196), ag (221), ag (223), ag (224), ag (230), ag (234), tc (417), Editing mismatches: 13, all mismatches: 14, alignment length: 442, cluster length: 218, total number of As: 43 Locations in RNA: 17 60 66 90 115 166 171 196 221 223 224 230 234 Locations in genome: 54591198 54591241 54591247 54591271 54591296 54591347 54591352 54591377 54591402 54591404 54591405 54591411 54591415 Upstream nucleotide (in genome): c c a g t t g c c a a c c Upstream nucleotide summary: a: 3, c: 6, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): c c c t a g g g a a g c c Downstream nucleotide summary: a: 3, c: 5, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 0, ca: 1, cc: 4, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 1, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chrX:54591182-54591623 (+) tttgaaacagagtctcactctttcactgaggctggagtgcagtggcgtgatcttggctcactgcaacctccacctcctgggttcaagcgattctcctgccttagcctcccgagtaacagggactacaggtgcccaccaccatgctgggctaatttttgtatttttagtagaggcgggggtttctccacactggccaggctggtcttgaacttctgacctcaaaagatccacccacctcggcctcccaaagtgctgggattataggcatgaaccaccgtgtccggccatatattttcgtcttttgaagactgttatatacatgaaattatatggtatgtagcattttgagagcgacttcttttgctatgagtaatacatttgagattcatccatatttctcagtatattaatagttcttatttctgagtcactccattgtgtg >AA164669:1-442 (+) tttgaaacagagtctcgctctttcactgaggctggagtgcagtggcgtgatcttggctcgctgcagcctccacctcctgggttcaagcggttctcctgccttagcctcccgagtgacagggactacaggtgcccaccaccatgctgggctaatttttgtatttttggtaggggcgggggtttctccacactggccgggctggtcttgaacttctgacctcgagggatccgcccgcctcggcctcccaaagtgctgggattataggcatgaaccaccgtgtccggccatatattttcgtcttttgaagactgttatatacatgaaattatatggtatgtagcattttgagagcgacttcttttgctatgagtaatacatttgagattcatccatatttctcagtatattaatagttcctatttctgagtcactccattgtgtg End editing Edited EST: AI791253, type: ag Aligns to: chrX:75411942-75412402 (++) All mismatches: ag (77), ag (122), ag (202), ag (216), ag (232), ag (242), ag (255), ag (260), ag (264), ag (269), ag (270), ag (273), ag (282), Editing mismatches: 13, all mismatches: 13, alignment length: 461, cluster length: 206, total number of As: 53 Locations in RNA: 77 122 202 216 232 242 255 260 264 269 270 273 282 Locations in genome: 75412018 75412063 75412143 75412157 75412173 75412183 75412196 75412201 75412205 75412210 75412211 75412214 75412223 Upstream nucleotide (in genome): g t t t g t a t t t a c a Upstream nucleotide summary: a: 3, c: 1, g: 2, t: 7, other: 0 Downstream nucleotide (in genome): g a g t t g t c t a a g c Downstream nucleotide summary: a: 3, c: 2, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 1, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 1, ta: 2, tc: 1, tg: 2, tt: 2, other: 0 >chrX:75411942-75412402 (+) gcctctggtaaccatccttctactcttgatgtccattagttcaatttattggacttttagatcccacaaatgggtgagaacattcaacgtttgtctttctgtgccttatttcacctaaaataatgatctccagttccatctatgttgttgcaaatgatagaatctcactcttttttattgcagactttattgtgtgtatgtagcacattttctctatcaattcatttgttgatggacacttaggttgcttccaaatgttacctattgtaaacagtgctgcaacaaacataggagtgcaggtatatccctgatatactgatttcctgtcttttgggtatatacccagcagtgggattgctggatcatatggtaactctatttttagttttttgaggaaccaccaaactgttcatagtggttgtactaatttacattttaaccaacagtatacaagggcttcc >AI791253:1-461 (+) gcctctggtaaccatccttctactcttgatgtccattagttcaatttattggacttttagatcccacaaatgggtgggaacattcaacgtttgtctttctgtgccttatttcacctaaaatgatgatctccagttccatctatgttgttgcaaatgatagaatctcactcttttttattgcagactttattgtgtgtatgtggcacattttctctgtcaattcatttgttggtggacacttgggttgcttccaagtgttgcctgttgtggacggtgctgcagcaaacataggagtgcaggtatatccctgatatactgatttcctgtcttttgggtatatacccagcagtgggattgctggatcatatggtaactctatttttagttntttgaggaaccaccaaactgttcatagtggttgtactaatttacattntaaccaacagtatacaagggcttcc End editing Edited EST: DB297163, type: ag Aligns to: chr10:104660343-104660849 (+-) All mismatches: ag (22), ag (24), ag (58), ag (74), ag (77), ag (81), ag (86), ag (95), ag (101), ag (128), ag (130), ag (134), ag (154), ag (157), ag (158), ag (163), ag (166), ag (171), ag (172), ag (187), ag (196), ag (197), ag (206), ag (220), ag (235), ag (239), ag (265), ag (266), ag (268), ga (446), ga (505), Editing mismatches: 29, all mismatches: 31, alignment length: 507, cluster length: 246, total number of As: 72 Locations in RNA: 22 24 58 74 77 81 86 95 101 128 130 134 154 157 158 163 166 171 172 187 196 197 206 220 235 239 265 266 268 Locations in genome: 104660828 104660826 104660792 104660776 104660773 104660769 104660765 104660756 104660750 104660723 104660721 104660717 104660697 104660694 104660693 104660688 104660685 104660680 104660679 104660664 104660655 104660654 104660645 104660631 104660616 104660612 104660586 104660585 104660583 Upstream nucleotide (in genome): g c t t a c a a c t t c t a a a t a c a a c c c c c a t t Upstream nucleotide summary: a: 10, c: 10, g: 1, t: 8, other: 0 Downstream nucleotide (in genome): g g a g g g c t g g t c g t a a c a a a c a g g g g t a t Downstream nucleotide summary: a: 8, c: 4, g: 12, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 2, ag: 1, at: 3, ca: 2, cc: 1, cg: 7, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 3, tt: 2, other: 0 >chr10:104660343-104660849 (+) ttgacaggatataatcacagatccatttaagcttgcagaagagtctgacagtatgaagtccagatgtgtccctgatgctgctggaggctgctgtggcacaaagaaaagctgctaaatctatagccaaccaggggaccacagtagtgggcaagagtgatctgcatgttttttaacctgcttttccccatagcacagaccataagaaacaacaaatggggccgggcacagtggctcatgcctataatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagtttgataccagcctggccaacatggtgaaatcctgtctctaccaaaaatacaaaaaaaattagctgggcatggtggtgcacacctatagtctcagctactcgggaggctgaggcaggagaattgcttgaa-cccaggaagtagaggctgcagtgagtaagcatcacgccactgtactccagcctgggcaacagagcaagactctgtctcaaaagc >DB297163:1-507 (-) ttaa-aggatataatcacagatccatttaagcttgcagaagagtctgacagtatgaagtccaaatgtgtccctgatgctgctggaggctgctgtggcacaaagaaaagctgctaaatctatagccaaccaggggaccacagtagtgggcaagagtgatctgcatgttttttaacctgcttttccccatagcacagaccataagaaacaacaaatggggccgggcacagtggctcatgcctgtggtcccagcactttgggaggccgaggcgggcggatcacctgaggtcgggagtttgataccggcctggccggcatggtgagatcctgtctctaccggaaatgcagaaaaggttggctgggcatggtggtgcacgcctgtggtctcagctactcgggaggctgaggcgggagagttgcttgaggcccgggaggtggaggctgcagtgagtgagcatcacgccactgtactccagcctgggcaacggggcaagactctgtctcaaaagc End editing Edited EST: DB343952, type: ag Aligns to: chr10:11716683-11717245 (+-) All mismatches: ag (75), ag (120), ag (121), ag (156), ag (158), ag (161), ag (162), ag (165), ag (202), ag (209), ag (220), ag (255), ag (277), ga (426), Editing mismatches: 13, all mismatches: 14, alignment length: 563, cluster length: 203, total number of As: 60 Locations in RNA: 75 120 121 156 158 161 162 165 202 209 220 255 277 Locations in genome: 11717171 11717126 11717125 11717090 11717088 11717085 11717084 11717081 11717044 11717037 11717026 11716991 11716969 Upstream nucleotide (in genome): c a t t a a t t a a c t c Upstream nucleotide summary: a: 5, c: 3, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): g t a c t a a c a g c a g Downstream nucleotide summary: a: 5, c: 3, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 2, ca: 0, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 3, tc: 2, tg: 0, tt: 0, other: 0 >chr10:11716683-11717245 (+) aggcggaagcctgcaggcaggaccctgcctttaactgagagctttccttttgcttaatcaattcagccctcctcacccttcaatgtgtccacgtgcctattttttcctggctgtgagacaagaacccagattaagctgaactaaggagcaaaaatccttgaatcacattcatggccctttgctgtgtgctgaggctacggggaggaaaaagactgtcaaggaccctgccctcaagaagtttagagtctggaaagagacacaggcattaaaaaagtaatttcaggccaggcacagtagctcatgcctgtaatcccagcacttgggaggctgaggtgggtggatcacatgaggccaagagttaaagaccagcctggctaacacggtgaaaccctgtctctactaaaaatacaaaaattaaccaggcatggtggcaggtgcctgtaatcctagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcggaggttgcaatgtgccgagataccaccactgcactccagcctgggagacagagcaagactctgcctc >DB343952:1-563 (-) aggcggaagcctgcaggcaggaccctgcctttaactgagagctttccttttgcttaatcaattcagccctcctcacccttcaatgtgtccacgtgcctattttttcctggctgtgagacaagaacccagattaagctaaactaaggagcaaaaatccttgaatcacattcatggccctttgctgtgtgctgaggctacggggaggaaaaagactgtcaaggaccctgccctcaagaagtttagagtctggaaagagacacaggcattaaaaaagtaatttcaggccgggcacagtagctcatgcctgtgatcccagcacttgggaggctgaggtgggtggatcgcatgaggccaggagttagagaccagcctggctaacacggtgaaaccctgtctctgctggaagtgcaaaaattaaccaggcatggtggcaggtgcctgtggtcctagctacttgggaggctgaggcaggagaatcacttgaacccgggaggcggaggttgcaatgtgccgagataccaccactgcactccagcctgggagacagagcaagactctgcctc End editing Edited EST: DB349385, type: ag Aligns to: chr10:38312527-38313091 (+-) All mismatches: ag (73), ag (126), ag (158), ag (159), ag (165), ag (170), ag (176), ag (189), ag (191), ag (195), ag (234), ag (244), ag (260), ag (261), ag (263), ag (269), ag (277), ag (283), ct (559), Editing mismatches: 18, all mismatches: 19, alignment length: 565, cluster length: 211, total number of As: 56 Locations in RNA: 73 126 158 159 165 170 176 189 191 195 234 244 260 261 263 269 277 283 Locations in genome: 38313019 38312966 38312934 38312933 38312927 38312922 38312916 38312903 38312901 38312897 38312858 38312848 38312832 38312831 38312829 38312823 38312815 38312809 Upstream nucleotide (in genome): t a a c a t c t a g c g a t t c c c Upstream nucleotide summary: a: 5, c: 6, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): c t a a a c t t t c g g t a t t g g Downstream nucleotide summary: a: 4, c: 3, g: 4, t: 7, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 3, ca: 1, cc: 0, cg: 3, ct: 2, ga: 0, gc: 1, gg: 1, gt: 0, ta: 1, tc: 2, tg: 0, tt: 2, other: 0 >chr10:38312527-38313091 (+) gaggatcttcctcaatttgatgaatgaacatgcacaaaatatttatagcaaatatatttgctggtaagatgaatgctttccctgtaaaactgggaacaaggcaaggatgtttgctcctgccactcttattcattgtagtactgtaacttctatcaagcacaatgaggcaagaaagtgaaatagaagtcatacacgtagagaagaaataaaactttatatttacatatgacatgattgtatacgtagaatattacaaggaatcttagaaaaaaacctcaggccaggcgcagtggctcatgcctataatcccagcgctttgggaggctgaggcaggtggatcacctgagatcgggagttcaagagcagcctgaccaatatggagaaaccccatctctactaaaaatacaaaattagccgggtgtggtggtgcatgcctgtaatcccagctacgtgggaggcaggagaattgcttcaacctggaaggtggaggttacggtgagccgagatcacgccattgcataccagcttgggcaacaagagtgaaactccgtctcaaaaacaaaac >DB349385:1-565 (-) gaggnttttcntcaatttgatgaatgaacatgcncaaaatatttatagcaaatatatttgctggtaagatgaatgctttccctgtaaaactgggaacaaggcaaggatgtttgctcctgccactcttattcattgtagtactgtaacttctatcaagcacaatgaggcaagaaagtgaaatagaagtcatacacgtagagaagaaataaaactttatatttacatatgacatgattgtatacgtagaatattacaaggaatcttagaaaaaaacctcaggccgggcgcggtggctcgtgcctgtggtcccagcgctttggggggctgaggcgggtggatcacctgagatcgggagttcaagagcagcctggccagtgtggagaaaccccgtctctgctaagaatacggaattagccgggtgtggtggtgcatgcctgtagtcccagctacgtgggaggcaggagaattgcttcaacctggaaggtggaggttgcggtgagccgagatcacgccattgcataccagcttgggcaacaagagtgaaactccgtctcaaaaacaaaac End editing Edited EST: DW416541, type: ag Aligns to: chr10:126162709-126163014 (+-) All mismatches: ag (3), ag (9), ag (32), ag (35), ag (57), ag (75), ag (100), ag (109), ag (119), ag (120), ag (122), ag (124), ag (129), ag (167), ag (170), ag (175), ag (180), at (183), ag (184), ag (192), ag (197), ag (209), ag (210), ag (223), ag (230), ag (235), ag (245), ag (248), gt (253), ag (254), ag (270), ag (278), tg (296), Editing mismatches: 30, all mismatches: 33, alignment length: 307, cluster length: 275, total number of As: 63 Locations in RNA: 3 9 32 35 57 75 100 109 119 120 122 124 129 167 170 175 180 184 192 197 209 210 223 230 235 245 248 254 270 278 Locations in genome: 126163014 126163009 126162986 126162983 126162961 126162943 126162918 126162909 126162899 126162898 126162896 126162894 126162889 126162851 126162848 126162843 126162838 126162834 126162826 126162821 126162809 126162808 126162795 126162788 126162783 126162773 126162770 126162764 126162748 126162740 Upstream nucleotide (in genome): g c a t c c c c a c g c t a t g t a c c a c g c c a c c c c Upstream nucleotide summary: a: 6, c: 16, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): n t g c g a g c g a c g g g c g g a g c g a c g c t c g c c Downstream nucleotide summary: a: 4, c: 10, g: 13, t: 2, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 4, at: 1, ca: 3, cc: 6, cg: 6, ct: 1, ga: 0, gc: 2, gg: 1, gt: 0, ta: 0, tc: 2, tg: 2, tt: 0, other: 1 >chr10:126162709-126163014 (+) ttttttttttttttttttgagacagggtctcactttgtcacctaggctggagtgcagtggcacaatcttggctcactgcagcctcgacctcctgggctcaagcgatcctttcacctcagcccccaaagtagctgagactacaagtgcacaccactgcacctggccaatttttgtatttttagtacagacaaggttttgccacgttgcccaggctggtcttgaactccagagctcaacggatctgcccacctcagtctcccaaagtgttgggattacaagtatgaaccaccgtgcccggccata-tga >DW416541:3-309 (-) tttttttttttttgttttgagacagggtctcgctttgtcgcctaggctggagtgcgttggcgcagtcttggctcgctgcggcctcggcctcctgggctcgggcgatcctttcgcctcggcccccagtgtggctgggactgcaggtgcacaccactgcacctggccaatttttgtatttttggtacgggcggggttttgccgcgttgcccgggctggtcttgaactccagagctcgacggatctgcccacctcggtctcccaaagtgttgggattgcaggtatgaaccaccgtgcccggccgtaatgg End editing Edited EST: AI358288, type: ag Aligns to: chr10:131287293-131287645 (+-) All mismatches: ac (57), ag (69), ag (141), ag (142), ag (168), ag (171), ag (178), ag (198), ag (204), ag (206), ag (208), ag (209), ag (213), ag (275), ag (276), Editing mismatches: 14, all mismatches: 15, alignment length: 352, cluster length: 208, total number of As: 59 Locations in RNA: 69 141 142 168 171 178 198 204 206 208 209 213 275 276 Locations in genome: 131287576 131287504 131287503 131287477 131287474 131287467 131287447 131287441 131287439 131287437 131287436 131287432 131287370 131287369 Upstream nucleotide (in genome): g a t t a t a t c a c t a t Upstream nucleotide summary: a: 5, c: 2, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): t t a g t g c g t c a g t a Downstream nucleotide summary: a: 3, c: 2, g: 4, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 3, ca: 1, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 2, tc: 0, tg: 4, tt: 0, other: 0 >chr10:131287293-131287645 (+) caatgcattaattactatagctttaggctaactcttaaaattgatgagtcagccaggcacagtggctcatgcctgtaatcccagcactttgggagactgaggtgggcagatcatgagttcaggagtttgagaccagtctagccaacatagtgaaaccccatctttactaaaaatagaaaaaattagctgggtgtggtggtgtgtgcctgtaatcccagttactcgggaggctgagacaggggaattgcatgaacccgggaagcggaggttgcagtgagctgagatagcgccattgcactccagcctgggtgacagtgcaggactctgtctcaaaaaaaaaaaaaaaaaaaaaa >AI358288:1-352 (-) caatgcattaattactatagctttaggctaactcttaaaattgatgagtcagccaggcacagtggctcatgcctgtggtcccagcactttgggagactgaggtgggcagatcatgagttcaggagtttgagaccagtctggccggcgtggtgaagccccatctttactaaaaatggaaaaagttggctgggtgtggtggtgtgtgcctgtggtcccagttactcgggaggctgagacaggggaattgcatgaacccgggaagcggaggttgcagtgagctgaggtagc-ccattgccctccagcctgggtgacagtgcaggactctgtctcaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: DW409648, type: ag Aligns to: chr11:118873054-118873354 (+-) All mismatches: ag (3), ag (4), at (5), ga (6), ag (29), ag (35), ag (41), ag (47), ag (74), ag (75), ag (100), ag (125), ag (126), ag (129), ag (134), ag (167), ag (169), ag (173), ag (179), ag (191), ag (196), ag (205), ag (208), ag (209), ag (215), ag (222), ag (228), ag (234), ag (239), ag (244), ag (245), ag (247), ag (253), ag (265), ag (277), ag (283), gt (286), Editing mismatches: 34, all mismatches: 37, alignment length: 302, cluster length: 280, total number of As: 64 Locations in RNA: 3 4 29 35 41 47 74 75 100 125 126 129 134 167 169 173 179 191 196 205 208 209 215 222 228 234 239 244 245 247 253 265 277 283 Locations in genome: 118873353 118873352 118873328 118873322 118873316 118873310 118873283 118873282 118873257 118873232 118873231 118873228 118873223 118873190 118873188 118873184 118873178 118873166 118873161 118873152 118873149 118873148 118873142 118873135 118873129 118873123 118873118 118873113 118873112 118873110 118873104 118873092 118873080 118873074 Upstream nucleotide (in genome): a a c t t a a c c a t t t c t g t c c c a c c c a c c a c c c c c c Upstream nucleotide summary: a: 8, c: 18, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): c a t c g g g a g a a g t g c a g g t g g a g c c c g t a c g g c g Downstream nucleotide summary: a: 7, c: 8, g: 15, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 3, at: 1, ca: 3, cc: 4, cg: 9, ct: 2, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 3, tt: 1, other: 0 >chr11:118873054-118873354 (+) ttttttttttttttttggacagtctcactctgttgcccaggctggagtgcagtggcacaatctcagctcactgcaacctccacctcccaggttcaagcagttctcccatctcagcttccagagtaggtggaattacaggcttgtgccactacgcctgactaatttttgtattttagtaaagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcaagtgatccacctgactcggcttcccaaagtgctaggattacaggcatgagccaccacacccggcc-tagaaac >DW409648:2-303 (-) ttttttttttttttttgtacggtctcgctctgttgcccgggctggagtgcggtggcgcggtctcggctcgctgcagcctccgcctcccgggttcgggcggttctcccgtctcggcttccagagtgggtgggattgcgggcttgtgccactacgcctgactaatttttgtgttttggtggagatggggtttcaccatgttggccgggctggtcttgaactcctgacctcgggtgatccacctgactcggcttcccaaggtgctgggattgcaggcgtgagccaccacacccggccgtaatggc End editing Edited EST: BM672450, type: ag Aligns to: chr11:101960260-101960529 (+-) All mismatches: ag (19), ag (20), ag (57), ag (67), ag (116), ag (131), ct (137), ag (147), ag (148), ag (156), ag (223), ag (264), ag (265), ag (267), ag (271), Editing mismatches: 14, all mismatches: 15, alignment length: 271, cluster length: 252, total number of As: 67 Locations in RNA: 19 20 57 67 116 131 147 148 156 223 264 265 267 271 Locations in genome: 101960511 101960510 101960473 101960463 101960414 101960399 101960383 101960382 101960374 101960307 101960266 101960265 101960263 101960260 Upstream nucleotide (in genome): a c a g t a a g a a a a a n Upstream nucleotide summary: a: 9, c: 1, g: 2, t: 1, other: 1 Downstream nucleotide (in genome): g a t g g a a a c t t a a c Downstream nucleotide summary: a: 6, c: 2, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 1, at: 3, ca: 1, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 1 >chr11:101960260-101960529 (+) aca-aaaatgttagtatacttggccgggcacagtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacaaggtcaggagatcgagaccattctgtctaacatggtgaaacctcatctctactaaaaatacaaaaaattagccgggcgtggtggcgggcgcctgtggtcccagctacttgggaggctgaggtaggagaatggcatgaacccgggaggcagaccttgcagtgagccaagatggtgccactgcactc >BM672450:1-271 (-) gcacgaggtgttagtatacttggccgggcacagtggctcacgcctgtagtcccagcactttgggaggccgaggcgggcggatcacaaggtcaggagatcgagaccattctgtctagcatggtgggacctcatctttactagaaatacaaaaaattggccgggcgtggtggcgggcgcctgtggtcccagctacttgggaggctggggtaggagagtggcatgaacccgggaggcagaccttgcagtgagccgggatggtgccactgcactc End editing Edited EST: AA021365, type: ag Aligns to: chr11:117200943-117201359 (+-) All mismatches: ag (12), ag (50), ag (63), ag (74), ag (75), ag (89), ag (93), ag (106), ag (115), ag (116), ag (126), ag (146), ag (153), ag (165), ag (180), ag (181), ag (210), ag (222), ag (223), ag (228), ag (239), Editing mismatches: 21, all mismatches: 21, alignment length: 417, cluster length: 230, total number of As: 59 Locations in RNA: 12 50 63 74 75 89 93 106 115 116 126 146 153 165 180 181 210 222 223 228 239 Locations in genome: 117201348 117201310 117201297 117201286 117201285 117201271 117201267 117201254 117201245 117201244 117201234 117201213 117201206 117201194 117201179 117201178 117201149 117201136 117201135 117201130 117201119 Upstream nucleotide (in genome): a g c a g c g t a t c a a c a c c a c g c Upstream nucleotide summary: a: 7, c: 8, g: 4, t: 2, other: 0 Downstream nucleotide (in genome): g g g c a g g c t a g a a t c a c g a g g Downstream nucleotide summary: a: 6, c: 4, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 2, at: 1, ca: 2, cc: 1, cg: 4, ct: 1, ga: 1, gc: 0, gg: 3, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr11:117200943-117201359 (+) tcatgtaacacattttgt-agtcatgtgtttacgtgtttggctttccaggtaggctgagctcaagttcagggccatgtgtaatcaggtttgtagccctaacacgtcgcacaatgtctggccca-tggtgggtgttcagtaagtgattacttggcgcggtgactcacgcctgtaatctcagcactttgggaggccaaggcgggcggatcacctgaggtcaggagttcgagacttggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcaggcgcctgtaatcctagctactcgtgaggctgaggcaggagcatcatttgaacctgggaggcagaggctgcagtgagcagagatcgtgccattgcaccccagcctgggtgacaagaatgatactc >AA021365:1-417 (-) tcatgtaacacattttgtaagtcatgtgtttacgtgtttngctttccaggtaggctgagctcaagttcagggccatgtgtaatcaggtttgtagccctaacacgtcgcacaatgtctggcccantggtgggtgttcagtaagtgattacttggcgcggtgactcacgcctgtaatctcggcactttggggggccggggc-ggcggatcgcctgaggtcaggagttcgagacttggccggcatggtgaaaccccgtctctactaaagatacaagaattagccgggcgtggtg-cgggcgcctntggtcctagctgctcgtgaggctggggcgggagcatcatttgggcctgggaggcggaggctgcagtgggcagagatcgtgccattgcaccccagcctgggtgacaggaatgatactc End editing Edited EST: AA134961, type: ag Aligns to: chr11:126164758-126165250 (+-) All mismatches: ag (32), ag (46), ag (61), ag (71), ag (82), ag (88), ag (114), ag (118), ag (120), ag (123), ag (128), ag (174), ag (221), Editing mismatches: 13, all mismatches: 13, alignment length: 492, cluster length: 190, total number of As: 55 Locations in RNA: 32 46 61 71 82 88 114 118 120 123 128 174 221 Locations in genome: 126165219 126165205 126165190 126165180 126165169 126165163 126165137 126165133 126165131 126165128 126165123 126165077 126165030 Upstream nucleotide (in genome): a a c g c t t a a t a g t Upstream nucleotide summary: a: 5, c: 2, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): g c g g g g g a a c a g a Downstream nucleotide summary: a: 4, c: 2, g: 7, t: 0, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 0, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr11:126164758-126165250 (+) aggcaggtggatcacctgaggtcaggagttcaagactagcctggccaatatggtgaaaccctgtctctactaaaaaaacaaaaaaaatcagctgggtgtggtggcgggggcctgtagtctcaactactcgggaggttgaggcaggagaattgcttgaacctgggaggtggagattgcagtgagctgaaatcacgccactgcactcgagcctgggcaactgagcgagactctgtctcaaaaaaaaaaggccaggcatggtggctcatgcctgtaatcctagtactttgggaggctgaggtgggcagaatacaaggtcaagaga-tcaagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggcgtgggcctgtagtcccagctactcgggaggctgaggcaggagaattgcttgaacctgggaggcagaagttgcagtgagccgatattgcaccaccgcac >AA134961:1-492 (-) aggcangtggatcacctgaggtcaggagttcaagactagcntggccaatatgntgaaaccctgtctctactaaaaaaacaaaaaaaatcagctgngtgtggtggcggnggcctgtagtctcaactactcgggaggttgaggcaggagaattgcttgaacctgggaggtggagattgcagtgagctgaaatcacgccactgcactcgagcctgggcaactgagcgagactctgtctcaaaaaaaaaaggccaggcatggt-gctcatgcctgtgatcctagtactttgggaggctgaggtgggcagaatacaaggtcaagggattc-anannatcctggccaacatggtgaaaccccatctctactagaaatgcagagattggctgggtgtggtggcgtgggcctgtggtcccggctactcggggggctgaggcgggagaattgcttgagcctgggaggcagaggttgcagtgagccgatattgcaccaccgcac End editing Edited EST: AA773288, type: ag Aligns to: chr11:117194772-117195155 (+-) All mismatches: ag (61), ag (68), ag (104), ag (108), ag (114), ag (124), ag (142), ag (155), ag (169), ag (177), ag (179), ag (194), ag (195), ag (203), ag (208), ag (213), ag (218), ag (226), ag (248), ag (314), Editing mismatches: 20, all mismatches: 20, alignment length: 383, cluster length: 255, total number of As: 67 Locations in RNA: 61 68 104 108 114 124 142 155 169 177 179 194 195 203 208 213 218 226 248 314 Locations in genome: 117195095 117195088 117195052 117195048 117195042 117195032 117195014 117195001 117194987 117194979 117194977 117194962 117194961 117194953 117194948 117194943 117194938 117194929 117194907 117194841 Upstream nucleotide (in genome): c c t c t c c t a c a a c c g c c c t c Upstream nucleotide summary: a: 3, c: 12, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g g c g g c t a g t c g a g g c g a a c Downstream nucleotide summary: a: 4, c: 5, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 0, ca: 2, cc: 3, cg: 5, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr11:117194772-117195155 (+) atatgacccctaaatgttcatccttactgtagaagacaacctatgagtgaagtcctctctctcttcttcactcattgggtatattactggtatatcatttagtgtgtcaggatgggcacagtggctcatgcttgtaatcccagcattttgggaggccaaggcaggcagatcacctgaggtcaggagttcaagaccagcctggccaacatgatgaaagcccatttctactaaaactacaaaacatagcccggtgtggtggcacatgcttgtagtcccagctacttgggaggctggggcaggagaatcgcttgaacccaggaggcagagattgcagtgagctgagattgcaccactgcactccagcctgggcaacaaactccctct >AA773288:1-383 (-) atatgacccctaaatgttcatccttactgtagaagacaacctatgagtgaagtcctctctctcttcttcgctcattgggtatattactggtatatcatttagtgtgtcaggatgggcacagtggctcatgcttgtgatcccagcattttgggaggccgaggcag-cggatcgcctggggtcgggagttcgggaccagcctggccagcgtgatgaaggcccatttctactgaaactacaaaacgtagcccggtgtggtggcgcatgcttgtggtcccggctgcttgggaggctggggcaggagaatcgcttgaacccgggaggcggagattgcagtgagctgagattgcaccactgcactccagcctgggcaacaaactccctct End editing Edited EST: AI380121, type: ag Aligns to: chr11:129730249-129730476 (+-) All mismatches: ag (34), ag (60), ag (76), ag (86), ag (95), ag (99), ag (112), ag (116), ag (122), ag (148), ag (159), ag (162), ag (187), ag (188), ag (210), ag (211), Editing mismatches: 16, all mismatches: 16, alignment length: 228, cluster length: 178, total number of As: 51 Locations in RNA: 34 60 76 86 95 99 112 116 122 148 159 162 187 188 210 211 Locations in genome: 129730443 129730417 129730401 129730391 129730382 129730378 129730365 129730361 129730355 129730329 129730318 129730315 129730290 129730289 129730267 129730266 Upstream nucleotide (in genome): c c c c c g t c t t a a a c a c Upstream nucleotide summary: a: 4, c: 8, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): c c g c g g c g g g t a c a g a Downstream nucleotide summary: a: 3, c: 5, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 1, ca: 2, cc: 3, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr11:129730249-129730476 (+) gggtggatcatgaggtcaagagatcgagaccatcctggccaacatggtgaaaccctgtctctactaaaaatataaaaattagcttggtgtggtggtgagcacctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacccagtaggcggaggttgcacagtgagccgagattatgccactgcactccaatctggcaacagagtgagactccatctc >AI380121:1-228 (-) gggtggatcatgaggtcgggagatcgagaccatcctggccggcatggtgaaaccctgtctctactagaagtataaaaattggcttggtgtggtggtgagcacctgtggtcccggctgcttgggaggctggggcgggagaatcgcttgaacccggtaggcggaggttgcgcagtgagccgagattatgccactgcgctccaatctggcaacagagtgagactccatctc End editing Edited EST: DB296675, type: ag Aligns to: chr12:122215981-122216356 (+-) All mismatches: ag (15), ag (35), ag (40), ag (45), ag (51), ag (55), ag (72), ag (75), ag (79), ag (80), ag (88), ag (91), ag (93), ag (94), ag (107), ag (111), ag (115), ag (121), ag (158), ag (161), ag (162), ag (176), ag (177), ag (186), ag (196), ag (201), ag (202), ag (210), ag (218), ag (231), ag (232), ag (237), ag (253), ag (262), Editing mismatches: 34, all mismatches: 34, alignment length: 376, cluster length: 248, total number of As: 68 Locations in RNA: 15 35 40 45 51 55 72 75 79 80 88 91 93 94 107 111 115 121 158 161 162 176 177 186 196 201 202 210 218 231 232 237 253 262 Locations in genome: 122216342 122216322 122216317 122216312 122216306 122216302 122216285 122216282 122216278 122216277 122216269 122216266 122216264 122216263 122216250 122216246 122216242 122216236 122216199 122216196 122216195 122216181 122216180 122216171 122216161 122216156 122216155 122216147 122216139 122216126 122216125 122216120 122216104 122216095 Upstream nucleotide (in genome): a c c c c g g c a g a g a c c t c t a a t a a a c a c c c a t g a c Upstream nucleotide summary: a: 12, c: 13, g: 5, t: 4, other: 0 Downstream nucleotide (in genome): t c c t a g g g c a t g g a g c g g t a a c a c g g a g c g a g t c Downstream nucleotide summary: a: 8, c: 8, g: 13, t: 5, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 3, at: 4, ca: 3, cc: 4, cg: 5, ct: 1, ga: 1, gc: 0, gg: 4, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr12:122215981-122216356 (+) aggcgacaccgactcctaggcgccctccagagccaagcagcttgcgacttctggtaggcaccggaatcccctgggatgcttgttttaaaagtcctgggccgggcacggtggctcacgcctgtaatcccagcactttgggaggctaaggcgggtggatcacgaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccggacgtggtggtgtgcgcatgtagtcccagctactcaggaggctgaggcaagagaatcgcttgaacccaggaggtggagcttgcagtgagccaagatcatgccactgcactctagcctgagtgacagaatgagactctgtccc >DB296675:1-376 (-) aggcgacaccgactcctaggcgccctccagagccaagcagcttgcgacttctggtaggcaccggaatcccctgggatgcttgttttaaaagtcctgggccgggcacggtggctcgcgcctgtagtcccagcactttggggggctggggcgggtggatcgcgaggtcgggagttcgggaccggcctggccagcatggtgaggccctgtctctactggaagtacaaaaattagccggacgtggtggtgtgcgcatgtggtcccggctgctcgggaggctgaggcgggggagtcgcttgggcccggggggtggagcttgcagtgggccgagatcgtgccgctgcgctctagcctgagtgacagagtgagactctgtccc End editing Edited EST: DW407566, type: ag Aligns to: chr12:2959152-2959661 (+-) All mismatches: ag (53), ca (54), ag (66), ag (81), ag (96), ag (99), ag (101), ag (106), ag (110), ag (134), ag (143), ag (149), ag (153), ag (176), ag (186), ag (202), ag (205), ag (206), ag (211), ag (215), ag (217), ag (220), ag (231), ag (236), ag (251), ag (264), ag (265), ag (303), ag (308), ag (309), ag (315), ag (336), ag (345), Editing mismatches: 32, all mismatches: 33, alignment length: 509, cluster length: 293, total number of As: 79 Locations in RNA: 53 66 81 96 99 101 106 110 134 143 149 153 176 186 202 205 206 211 215 217 220 231 236 251 264 265 303 308 309 315 336 345 Locations in genome: 2959642 2959629 2959614 2959599 2959596 2959594 2959589 2959585 2959561 2959552 2959546 2959542 2959519 2959509 2959493 2959490 2959489 2959484 2959480 2959478 2959475 2959464 2959459 2959444 2959431 2959430 2959392 2959387 2959386 2959380 2959359 2959350 Upstream nucleotide (in genome): c c c c g c g c a a c g t c t a a t a t t a g c a c c a t c t a Upstream nucleotide summary: a: 9, c: 12, g: 4, t: 7, other: 0 Downstream nucleotide (in genome): a a g t t g g g c t g g g g g t a c a a c c t g g a g t a c g g Downstream nucleotide summary: a: 7, c: 5, g: 14, t: 6, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 2, at: 3, ca: 3, cc: 1, cg: 7, ct: 1, ga: 0, gc: 0, gg: 2, gt: 2, ta: 2, tc: 2, tg: 3, tt: 0, other: 0 >chr12:2959152-2959661 (+) tttctatgactcagcgcactttgcccctggttcggcagatagtcccctgtttgctgttgttggtttatgcaggggctctcagcctggctgcacattacaatcaccctgggagcttttaaacacaacccacccacactgccctcaaggtcagttagttagaatctccagagggaggctcaaacctcagcatttgaaaaaagagcccctaggccggacccagtggctcacacctgtaatcccagcactttgggaggccgaggcgggtggatcacaaggtcaagagttcgagaccagcctggccgacatgatgaaactccgtctctactaaaaatacaaaaattagccagacatggtggcaggcacctgtagtcccagctactcgggaggctgaggcaggagaatcacttgaacccgggaggaggaggttgcaagcagtgagcccagatcatgccactgcactccagcctgggcaagagcaagactctgtctcaaaaaaaaaaaaaaaaaaaa >DW407566:34-542 (-) tttctatgactcagcgcactttg-ccctggttcggcagatagtcccctgtttgctgttgttggtttatgcaggggctctcagcctggctgcacattacaatcaccctgggagcttttaaacacaacccacccacactgccctcaaggtcagttagttagaatctccagagggaggctcaaacctcagcatttgaaaaaggagcccctgggccggacccagtggctcacgcctgtggtcccggcactttgggaggccgaggcgggtggatcacaaggtcgggagttcgagaccggcctggccgacatggtgaagctccgtctctgctgagaatgcaaaggttggccagacatggtggcgggcacctgtggtcccagctactcgggaggctggggcgggagagtcacttgagcccgggaggaggaggttgcaagcggtgggcccgggtcgtgccactgcactccggcctgggcaagagcgagactctgtctagaaaaaaaaaaaaaaaaaaa End editing Edited EST: BX101995, type: ag Aligns to: chr12:1616092-1616498 (+-) All mismatches: ag (70), ag (98), ag (124), ag (125), ag (131), ag (176), ag (183), ag (188), ag (196), ag (198), ag (199), ag (203), ag (207), ag (226), ag (230), ag (252), ag (261), ag (269), Editing mismatches: 18, all mismatches: 18, alignment length: 407, cluster length: 200, total number of As: 55 Locations in RNA: 70 98 124 125 131 176 183 188 196 198 199 203 207 226 230 252 261 269 Locations in genome: 1616429 1616401 1616375 1616374 1616368 1616323 1616316 1616311 1616303 1616301 1616300 1616296 1616292 1616273 1616269 1616247 1616238 1616230 Upstream nucleotide (in genome): c c a t t c a c g a c a c c a a c c Upstream nucleotide summary: a: 6, c: 9, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g g t a c a c g c g a t g g g t c g Downstream nucleotide summary: a: 3, c: 4, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 3, ca: 2, cc: 1, cg: 6, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr12:1616092-1616498 (+) tccacaacatcgtgaatgagtttagtgccacagcattaaatgtattcatggtgtacttgtgtacttatgaatggctaagatgataaatattatgtacattttaccacaataaaaaagtaatgaattctggccaggtacagtggctcacccctgtaatcccagcactttgggaggctaaggcaggctgatcacttgaggtcaggaattcaagaccagcccagccaacatggcaaaaccccatctctactaaaaatatagccaggcgtggtggcgcatacctgtaatctctgctatttgggagactgaggcaggagaatcgcatgaacccgggaggtgcaggttgcagtgagccaagattgtaccactgcactccaacctgggttacagcatctcaaaaaaaaaaaaaa >BX101995:1-407 (-) tccacaacatcgtgaatgagtttagtgccacagcattaaatgtattcatggtgtacttgtgtacttatgaatggctaagatgataaatattatgtacattttaccacaataaaaaagtaatgaattctggccaggtacggtggctcgcccctgtagtcccagcactttgggaggctagggcgggctgatcacttgaggtcgggagttcggggccagcccggccagcatggcgaaaccccatctctactaaaaatatagccaggcgtggtggcgcatgcctgtggtctctgctatttgggagactgaggcgggagaatcgcatgaacccgggaggtgcgggttgcagtgagccaagattgtaccactgcactccaacctgggttacagcatctcaaaaaaaaaaaaaa End editing Edited EST: BX404424, type: ag Aligns to: chr12:21794886-21795064 (+-) All mismatches: ag (464), ag (465), ag (466), ag (475), ag (476), ag (478), ag (479), ag (483), ag (488), ag (492), ag (499), ag (526), ag (533), ag (554), ag (558), ag (564), ag (568), ag (575), ag (583), ag (603), Editing mismatches: 20, all mismatches: 20, alignment length: 179, cluster length: 140, total number of As: 43 Locations in RNA: 464 465 466 475 476 478 479 483 488 492 499 526 533 554 558 564 568 575 583 603 Locations in genome: 21795064 21795063 21795062 21795053 21795052 21795050 21795049 21795045 21795040 21795036 21795029 21795002 21794995 21794974 21794970 21794964 21794960 21794953 21794945 21794925 Upstream nucleotide (in genome): a a t a g a t t t c t a c t a t a c a c Upstream nucleotide summary: a: 8, c: 4, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): n a a t a g a c a g g t c g t g g g g g Downstream nucleotide summary: a: 5, c: 2, g: 9, t: 3, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 3, at: 3, ca: 0, cc: 1, cg: 3, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 3, tc: 1, tg: 3, tt: 0, other: 1 >chr12:21794886-21795064 (+) cacttgagtcgccatgttcccccaaaatccatccatggcagctgctgggatgaatgccaagtttttcagccataaggtagcgaaatctagcagaatccagattacatccacttccaatcacgcggtgtttgggtaatccacttagtttccaggtaacatacgtaagaatgtccactaaa >BX404424:464-642 (-) cacttgagtcgccatgttcccccaaaatccatccatggcggctgctgggatgaatgccaggtttttcggccatagggtggcgaagtctggcvgaatccsgattacatccgcttccagtcacgcggtgtttgggtaatccacttggtttccgggtgacatgcgtgggggtgtccactggg End editing Edited EST: AW882931, type: ag Aligns to: chr12:122505125-122505398 (+-) All mismatches: ag (32), ag (35), ag (42), ag (47), ag (56), ag (61), ag (62), ag (63), ag (69), ag (71), ag (94), ag (117), ag (118), ag (134), ag (205), ag (207), ag (232), ag (242), ag (247), ag (251), ta (257), ag (278), tc (291), Editing mismatches: 21, all mismatches: 23, alignment length: 272, cluster length: 249, total number of As: 73 Locations in RNA: 32 35 42 47 56 61 62 63 69 71 94 117 118 134 205 207 232 242 247 251 278 Locations in genome: 122505398 122505395 122505388 122505382 122505373 122505368 122505367 122505366 122505360 122505358 122505334 122505311 122505310 122505294 122505223 122505221 122505196 122505186 122505181 122505177 122505150 Upstream nucleotide (in genome): t a t t c a a g c a c a c c c a c c c c t Upstream nucleotide summary: a: 6, c: 10, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): n t c a t c a a t c g g a g t c g c g g a Downstream nucleotide summary: a: 5, c: 5, g: 6, t: 4, other: 1 Dinucleotide summary: aa: 1, ac: 3, ag: 1, at: 1, ca: 1, cc: 1, cg: 5, ct: 3, ga: 1, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 1 >chr12:122505125-122505398 (+) aaaaaaaaaacttctttttgcctgtaaatccatcactttgggaggctgaggcaggcagatcacttgaggtcaggagtttgagaaccagcctgggcaacatggtgaaactctgtctctaccaaaatacaaaagttagccgagtggccgggcatggtacacctgtgatcccagcactttgggaggccaaggtgggtggatcatctgaggtcaggactttgagaccagcctggccaacatggtgaaaccccatctctactaaaagtacaaaaaatta >AW882931:32-303 (-) aaaaaaaaaactcctttttgcctgtgaatccatcactttgggaggcagaggcgggcggatcgcttgaggtcgggagtttgagaaccagcctgggcagcgtggtgaaactctgtctctaccaaaatacaaaagttagccgagtggccgggcatggtacacctgtgatcccggcactttgggaggccggggtgggtggatcatctgaggtcgggactttgagaccagcctg-ccagcgtggtggggccccgtctctactgaaa-tgcaaaaagttg End editing Edited EST: AA617823, type: ag Aligns to: chr12:27574169-27574561 (+-) All mismatches: ag (26), ag (28), ag (43), ag (51), ga (54), ag (62), ag (66), ag (87), ag (105), ag (121), ag (127), ag (128), ag (134), ag (136), ag (234), ag (235), ag (244), ag (247), ag (258), ag (259), ag (269), ag (283), ag (284), ag (292), ag (297), ag (307), ag (338), ag (359), Editing mismatches: 27, all mismatches: 28, alignment length: 391, cluster length: 336, total number of As: 96 Locations in RNA: 26 28 43 51 62 66 87 105 121 127 128 134 136 234 235 244 247 258 259 269 283 284 292 297 307 338 359 Locations in genome: 27574536 27574534 27574519 27574511 27574499 27574495 27574474 27574456 27574440 27574434 27574433 27574427 27574425 27574327 27574326 27574317 27574314 27574303 27574302 27574292 27574278 27574277 27574269 27574264 27574254 27574223 27574201 Upstream nucleotide (in genome): c a c c g c g g a a t c c a a t t a a c a c c g c t c Upstream nucleotide summary: a: 8, c: 11, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): g c c c g g a g c t a c c a a a c c a a g a g g g a g Downstream nucleotide summary: a: 9, c: 8, g: 9, t: 1, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 1, at: 1, ca: 2, cc: 4, cg: 5, ct: 0, ga: 1, gc: 0, gg: 3, gt: 0, ta: 3, tc: 1, tg: 0, tt: 0, other: 0 >chr12:27574169-27574561 (+) cctctgcatataagatttactcttaataggccagacgtggtggctcacgcctgtaatcccagtactttgggaggctgagacgggcagatcacttgaggtcaggagttcaagaccagcctggccaatatggtgaaaccccgtttctactaaaaatacaaaaaaaattacccaggcactcactcttgaggtaactaaccaactcccacgataatgacagtccattcatgagcgcaaaggcctcatgacctaatggcacacacctgtaatcccaactgcttgggaggctgaggcgagaggattgcttgaacctgggaggcagaggttgcagtgagccgagatcgc-accactgcactccagtctgggcaacagagtgagacttcatctcaaaaaaag >AA617823:1-391 (-) cctctgcatataagatttactcttaataggccggacgtggt-gctcacgcctgtgatcccagtactttgggaggctgagacgggcggatcacttggggtcgggagttcgggaccagcctggccgatatggtgaggccccgtttctgctgaaaatacaggaaaaattacccaggcactcactcttgaggtaactaaccaactcccacgataatgacagtccattcatgagcgcaaaggcctcatgacctaatggcacgcgcctgtggtcccagctgcttgggaggctggggcgagaggattgcttggacctgggaggcagaggttgcggtgggccgag-t-accgccactgcgctccagtctgggcagcggagtgagacttcatctcaaaaaaag End editing Edited EST: AI871371, type: ag Aligns to: chr12:109930188-109930562 (+-) All mismatches: ag (4), ag (69), ag (73), ag (80), ag (81), ag (85), ag (86), ag (90), ag (94), ag (99), ag (112), ag (118), ag (121), ag (125), ag (129), ag (161), ag (172), ag (176), ag (179), ag (190), ag (198), ag (200), ag (201), ag (215), ag (216), ag (221), ag (224), ag (229), ag (235), ag (240), ag (254), ag (262), ag (265), ag (270), ag (271), ag (293), Editing mismatches: 36, all mismatches: 36, alignment length: 374, cluster length: 290, total number of As: 82 Locations in RNA: 4 69 73 80 81 85 86 90 94 99 112 118 121 125 129 161 172 176 179 190 198 200 201 215 216 221 224 229 235 240 254 262 265 270 271 293 Locations in genome: 109930558 109930493 109930489 109930482 109930481 109930477 109930476 109930472 109930468 109930463 109930450 109930444 109930441 109930437 109930433 109930401 109930390 109930386 109930383 109930372 109930364 109930362 109930361 109930347 109930346 109930341 109930338 109930333 109930327 109930322 109930308 109930300 109930297 109930292 109930291 109930269 Upstream nucleotide (in genome): a g c a c a g c g c g g c t c t a a t a c a c a c g c g c c g c c a t c Upstream nucleotide summary: a: 9, c: 15, g: 8, t: 4, other: 0 Downstream nucleotide (in genome): g g g g a g a g g c g g g c g g t a c c t c a g a g g g t g g c g t a g Downstream nucleotide summary: a: 6, c: 6, g: 20, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 4, at: 2, ca: 3, cc: 2, cg: 8, ct: 2, ga: 1, gc: 0, gg: 7, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr12:109930188-109930562 (+) tctgttggacaaggctgacctagagcaggtctgtccgatggaaacacagttagagccacatttaaaaagccaaaagaggccaggcacggcggcccatgcctgtaatcccagcactttgggagactgaggtgggcagatcattttgagctcaggagttcaagaccagtctgggcaacatggccaaaccttgtctctacaaaaaatacaaacattagctgggcatggtgccatgtgcctgtggttccagctactcaggagtctgaggtgggaggatcactggagccagggaagtcaaggctgcagcgagccgtgattgagcttctccagcctggatgacagagtgatacctggtctcaaaaaaaaaaaaaaaagtca >AI871371:1-374 (-) tctgttggacaaggctgacctagagcaggtctgtccgatggaaacacagttagagccacatttaaaaagccaaaagaggccgggcacggcggcccatgcctgtggtcccggcgctttgggggactgaggtgggcggatcgttttgggctcgggggttcgggaccagtctgggcggcgtggccaagccttgtctctgcagaaagtacaaacattggctgggcatggtgccatgtgcctgtggttccggctgctcgggggtctggggtgggaggatcgctggggccgggggggtcggggctgcggcgggccgtgattgagcttctccagcctggatgacagagtgatacctggtctcaaaaaaaaaaaaaaag-tca End editing Edited EST: DB348832, type: ag Aligns to: chr13:32866551-32866938 (+-) All mismatches: ag (29), ag (45), ag (55), ag (65), ag (79), ag (89), ag (95), ag (98), ag (103), ag (116), ag (130), ag (144), ag (153), ag (157), ag (161), ag (169), ag (186), ag (196), ag (197), ag (220), ag (225), ag (233), Editing mismatches: 22, all mismatches: 22, alignment length: 388, cluster length: 205, total number of As: 60 Locations in RNA: 29 45 55 65 79 89 95 98 103 116 130 144 153 157 161 169 186 196 197 220 225 233 Locations in genome: 32866910 32866894 32866884 32866874 32866860 32866850 32866844 32866841 32866836 32866823 32866809 32866795 32866786 32866782 32866778 32866770 32866753 32866743 32866742 32866719 32866714 32866706 Upstream nucleotide (in genome): c c c g g a c a a g a t c t a a a a c c a c Upstream nucleotide summary: a: 9, c: 8, g: 3, t: 2, other: 0 Downstream nucleotide (in genome): g c t g g c c t g g t g g g a t c c a g g g Downstream nucleotide summary: a: 2, c: 5, g: 11, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 2, at: 3, ca: 1, cc: 2, cg: 4, ct: 1, ga: 0, gc: 0, gg: 3, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr13:32866551-32866938 (+) ctgcagttttgaaagaagttccaaggtgtataaaatgctgtcacatgctacagagaaatatttcatgaaaggaagagtcaatcaataaagcaaactttggcagggtgcggtggctcacgcctgtaatcccagcactttgggaggccaaggtgggcagatcacaaggtcaggagattgagatcatcttggccaacatggtgaaaccctgcctctactaaaatacaaaaaactagccaggcatggtagcccgtgcccgtaatcccagctacttgagaggctgaggtaagggaatcacttgaacccgggaggaggaggttgcagtgagctgagatcatgtcactgcactccagcctggtgacagagcaagactccatctcaataaataaat >DB348832:1-388 (-) ctgcagttttgaaagaagttccaaggtgtataaaatgctgtcacatgctacagagaaatatttcatgaaaggaagagtcaatcaataaagcaaactttggcagggtgcggtggctcacgcctgtaatcccagcactttgggaggccaaggtgggcggatcacagggtcgggagattgagatcatcttggccggcatggtgaagccctgcctctactaaagtacaaaagactggccgggcatggtggcccgtgcccgtagtcccagctacttgggaggctgaggtaggggagtcgcttgagcccgggagggggaggttgcagtgggctgagatcgtgtcactgcgctccagcctggtgacggagcaagactccatctcaataaataaat End editing Edited EST: BU738234, type: ag Aligns to: chr13:112554987-112555547 (+-) All mismatches: ga (12), ga (14), ga (15), ca (17), ag (33), ag (37), ag (38), ag (39), ag (40), ag (41), ag (46), ag (72), ag (73), ag (80), ag (82), ag (83), ag (84), ag (85), ag (86), ag (107), ag (120), tc (124), ag (126), ag (140), ag (141), ag (160), ag (168), ag (180), ag (184), ag (185), ag (186), ag (191), ag (202), ag (203), ag (204), ag (207), ag (221), ag (224), ag (231), ag (242), ag (247), ag (250), ag (259), ag (260), ag (261), ag (264), ag (269), ag (286), ag (289), ag (290), ag (291), ag (292), ag (293), ag (295), ag (296), ct (304), ag (319), ag (320), ag (323), ag (324), ag (325), ag (327), ag (329), ag (331), ag (332), ag (337), ag (346), ag (352), ag (362), ag (366), ag (370), ag (371), ag (378), ag (414), ag (415), ag (416), tc (419), ag (440), ag (441), ag (444), ag (450), ag (456), ag (478), ag (495), ag (498), ag (500), ag (501), ag (511), ag (512), ag (513), ag (519), ag (520), ag (530), ag (535), ag (541), ag (545), ag (546), ag (554), ag (560), Editing mismatches: 92, all mismatches: 99, alignment length: 561, cluster length: 528, total number of As: 153 Locations in RNA: 33 37 38 39 40 41 46 72 73 80 82 83 84 85 86 107 120 126 140 141 160 168 180 184 185 186 191 202 203 204 207 221 224 231 242 247 250 259 260 261 264 269 286 289 290 291 292 293 295 296 319 320 323 324 325 327 329 331 332 337 346 352 362 366 370 371 378 414 415 416 440 441 444 450 456 478 495 498 500 501 511 512 513 519 520 530 535 541 545 546 554 560 Locations in genome: 112555525 112555521 112555520 112555519 112555518 112555517 112555512 112555486 112555485 112555478 112555476 112555475 112555474 112555473 112555472 112555451 112555438 112555432 112555418 112555417 112555398 112555390 112555378 112555374 112555373 112555372 112555367 112555356 112555355 112555354 112555351 112555337 112555334 112555327 112555316 112555311 112555308 112555299 112555298 112555297 112555294 112555289 112555272 112555269 112555268 112555267 112555266 112555265 112555263 112555262 112555239 112555238 112555235 112555234 112555233 112555231 112555229 112555227 112555226 112555221 112555212 112555206 112555196 112555192 112555188 112555187 112555180 112555144 112555143 112555142 112555118 112555117 112555114 112555108 112555102 112555080 112555063 112555060 112555058 112555057 112555047 112555046 112555045 112555039 112555038 112555028 112555023 112555017 112555013 112555012 112555004 112554998 Upstream nucleotide (in genome): a a a a a c t a t c a a a a t t g t a g t t c a a c t a a c c c c a t g c a a g g t c a a a a g a t a a a a c a t a a a t t c t a c t a a t a c c c c t c t a t a a c a t t c g a c c c Upstream nucleotide summary: a: 40, c: 23, g: 7, t: 22, other: 0 Downstream nucleotide (in genome): c g a a a a a t a c c a a a a t t c c a t g g t a a t g a a g t g g t g c g a a g g c t a a a a g a t a c a a c a t a t g t t c c a a a a a g a g g g a g t t a g a a g a t c g c a g g Downstream nucleotide summary: a: 39, c: 13, g: 23, t: 17, other: 0 Dinucleotide summary: aa: 18, ac: 7, ag: 8, at: 7, ca: 8, cc: 4, cg: 9, ct: 2, ga: 3, gc: 0, gg: 3, gt: 1, ta: 10, tc: 2, tg: 3, tt: 7, other: 0 >chr13:112554987-112555547 (+) cgtcttctcccagcgccagcctttcaacagagcagcacattatgcctggataagactcaaagagcagcttaatatcaggttctctggggctgtaatcatcggttcaggatggagcagacacagccgcagcaaggcctctgtgcagcccccggtttaaaacacatcaacgcatccgtgggcacttttgtgagttaaagctcaacttacacatctgcctgtatccataggaaatgaatgaaaataaacaaacaaattccttgcattcaacgcagcgtaagaaaaatcacatcctgttccccagtagctgaggaaagccggctcacgagagtatacagggagaagaggccagcattgtgtggctgccagcaaagctcacttgtatgtcaaatgcagcgcttttcttagcccattatgtattttttttttcttgaacactcctgtgtctactgggatctcctgtttttattgttttgggatgagattttaaaaacaccatttaatgtagcctgtgtgctcttgttcattaaaccaaaaagaaaccctggatcacggcacaggaga >BU738234:11-571 (-) cgtcttctcccggcgccggcctttcggcagggcagcgcattgtgcctggatgggactcggggagcagcttggtgtcgggttctctggggctgtgatcatcggttcaggatggagcggacacggccgcggcggggcctctgtgcagcccccggcttgggacacatcaacgcatccgtgggcacttttgtgagttgaagctcggcttgcacgtctgcctgtgtccatgggaaatgagtgaaggtgagcgggcaggttccttgcattcaatgcagcgtggggggggtcgcatcctgttccccagtggctggggggggccggctcgcgggagtgtacagggagaggaggccggcgttgtgtggctgccggcggggctcacttgtgtgtcgggtgcggcgcttttcttggcccattgtgtattttttttttcttgggcactcctgtgtctgccggggtctcctgtttttgttgttttgggatgagattttgggggcgccatttggtgtagcctgtgtgctcttgttcattgaaccggggggaagccctggatcacggcaaaaaaaa End editing Edited EST: BF833317, type: ag Aligns to: chr13:100290220-100290527 (+-) All mismatches: ag (35), ag (96), ag (112), ag (113), ag (114), ag (127), ag (128), ag (162), ag (249), ag (278), ag (279), ag (281), ag (286), ct (304), ag (318), Editing mismatches: 14, all mismatches: 15, alignment length: 308, cluster length: 284, total number of As: 58 Locations in RNA: 35 96 112 113 114 127 128 162 249 278 279 281 286 318 Locations in genome: 100290525 100290464 100290448 100290447 100290446 100290433 100290432 100290398 100290311 100290282 100290281 100290279 100290274 100290242 Upstream nucleotide (in genome): t c a a c a c t c a c c a a Upstream nucleotide summary: a: 6, c: 6, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): a g t a a a a g g t a c t g Downstream nucleotide summary: a: 6, c: 1, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 3, ca: 3, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr13:100290220-100290527 (+) ttttttttttttttttgagacaaggtcttgctctgtcgcctaggctggagtgcaatggcacaatcgcggttcactgcattctcgaccacccagactccagtgagtctcctaccttagcctcctgagtagctaagaccaccagctacacctggctaatttttattttttaattttttgtagagatgtctccccatgttgccctggctggtctcaaatgcctgggctcaaatggtccccctgcctcagccttctgaagtgctgggattacaggaatgagccactgtgcccagcttaatgatgctattaaa >BF833317:33-340 (-) ttttttttttttttttgagacagggtcttgctctgttgcctaggctggagtgcagtggcgcggtcgcggttcactgcattctcgaccacccggactccagtgagtctcctaccttagcctcctgagtagctaagaccaccagctacacctggctaatttttattttttaattttttgtggagatgtctccccatgttgccctggctggtctcggatgcctgggctcgggtggtccccctgcctcggccttctgaagtgctgggattacaggaatgagccactgtgcccagcttaatgatgctattgaa End editing Edited EST: AW403445, type: ag Aligns to: chr13:28227928-28228384 (+-) All mismatches: ag (172), ag (180), ag (192), ag (195), ag (199), ag (203), ag (212), ag (213), ag (223), ag (226), ag (230), ag (258), ag (259), ag (260), ag (265), ag (272), ag (274), ag (284), ag (291), ag (292), ag (293), ag (296), ag (301), ag (302), ag (312), ag (328), ag (340), Editing mismatches: 27, all mismatches: 27, alignment length: 457, cluster length: 169, total number of As: 65 Locations in RNA: 172 180 192 195 199 203 212 213 223 226 230 258 259 260 265 272 274 284 291 292 293 296 301 302 312 328 340 Locations in genome: 28228220 28228212 28228200 28228197 28228193 28228189 28228180 28228179 28228169 28228166 28228162 28228134 28228133 28228132 28228127 28228120 28228118 28228108 28228101 28228100 28228099 28228096 28228091 28228090 28228080 28228064 28228052 Upstream nucleotide (in genome): t t a a g t a g c a a a a t c a t t a a c t a a t t t Upstream nucleotide summary: a: 12, c: 3, g: 2, t: 10, other: 0 Downstream nucleotide (in genome): c t c g g c c a a c a t a a g g a g g a a a g a c t c Downstream nucleotide summary: a: 10, c: 7, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 3, ag: 4, at: 1, ca: 2, cc: 0, cg: 1, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 3, tc: 4, tg: 1, tt: 2, other: 0 >chr13:28227928-28228384 (+) gtaattttggaaacctctttgatgtctggcttatagaagacacctgggttcttatatctgcttctgaattcgatctattgtaatgtgttattttggctgaagtatgtgaagaaaatactaccttacaaagatatgtattttcaaaaggaaatacatatcagaaagtttaacaaagccagtaggtgatactaaagttgtcaggataaatgatgtctatctggagagctggcaagaaacaaccaagccccttgaacgctccttacagagcaagaactatgattgatattttcttactcacttgtaaattgcgtgattttagctctatttcaataactttttcagaagactgtagatattcttctttgatactacatcagaactttgcaagtaacttcaagtagtaatttcgtaatattctttttaataatgtgtacttttcctatcctattacagtaaa >AW403445:8-464 (-) gtaattttggaaacctctttgatgtctggcttatagaagacacctgggttcttatatctgcttctgaattcgatctattgtaatgtgttattttggctgaagtatgtgaagaaaatactaccttgcaaagatatgtgttttcaaaaggaaatgcatatcagagggtttgacggggccagtgggtgatactgaggttgtcgggatgggtgatgtctatctggagagctggcaagagacagccgagccccttgggcgctccttgcagggcaggagctatgattgatgttttcttgctcacttgtaaattgcgtgattttagctctatttcaataactttttcagaagactgtagatattcttctttgatactacatcagaactttgcaagtaacttcaagtagtaatttcgtaatattctttttaataatgtgtacttttcctatcctattacagtaaa End editing Edited EST: AI003731, type: ag Aligns to: chr13:100790705-100791187 (+-) All mismatches: ag (12), ag (44), ag (49), ag (50), ag (58), ag (67), ag (78), ag (86), ag (110), ag (120), ag (130), ag (136), ag (162), ag (187), ag (197), ag (203), ag (211), ag (255), Editing mismatches: 18, all mismatches: 18, alignment length: 482, cluster length: 244, total number of As: 73 Locations in RNA: 12 44 49 50 58 67 78 86 110 120 130 136 162 187 197 203 211 255 Locations in genome: 100791176 100791144 100791139 100791138 100791130 100791121 100791110 100791102 100791078 100791068 100791058 100791052 100791026 100791001 100790991 100790985 100790977 100790933 Upstream nucleotide (in genome): c c a c c t a a t t t c a a c c c t Upstream nucleotide summary: a: 5, c: 8, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): a c g a g g c g c a g g a g g a g a Downstream nucleotide summary: a: 6, c: 3, g: 9, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 3, at: 0, ca: 3, cc: 1, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 2, tt: 0, other: 0 >chr13:100790705-100791187 (+) acaatgttaaaatttttgctttcaacagttaaacgtatttcaaaagcaatgttatcatttctgttgctcttccttcattccttatgttccagatttccttctaatgttattttccttctgtctgaagaacttccttaagcagttttagagctgatctgctagcaactaatgctcttagttttcctttatttgaaaatgtcttggctgggtgca--atagctcacgcctgtaatcacagcactttgggaggccgaagcgggtggatcacgaggtcaggagttcaagaccagcctggccaagatggtgaaactctgtctctaccaaaactacaaaaaaattagccaggcgcagtggtaggcgtctgtaatcccagctacttgggaggctgaggcaggagaaaggcttgaaccaggacagtagaggttgcagtgagccaagatcacaccactgcactccagcctgggagacagagcaaaactccatct >AI003731:1-482 (-) acaatgttaaaatttttgctttcaacagttaaacgtatttcaaaagcaatgttatcatttctgttgctcttccttcattccttatgttccagatttccttctaatgttattttccttctgtctgaagaacttccttaagcagttttagagctgatct-ctagcaactaatgctcttagttttcctttatttgaaaatgtcttggctgggtgcannat-g-tcacgcctgtgatcacagcactttgggaggccgaagcgggtggatcacgaggtcgggagttcgagaccggcctggccaggatggtgaaactctgtctctaccagaactacaaaaaaattagccaggcgcggtggtgggcgtctgtgatcccagctgcttgggaggctgaggcaggagaagggcttgagccaggacagtggaggttgcggtgagccgggatcgcaccactgcactccagcctgggagacagagcgaaactccatct End editing Edited EST: DW422033, type: ag Aligns to: chr14:55526908-55527193 (+-) All mismatches: ag (9), ag (33), ag (47), ag (98), ag (102), ag (127), ct (154), ag (171), ag (173), ag (183), ag (186), ag (187), ag (195), ag (213), ag (219), ag (232), ag (248), ag (249), ag (257), ag (269), ag (285), ag (294), Editing mismatches: 21, all mismatches: 22, alignment length: 287, cluster length: 285, total number of As: 50 Locations in RNA: 9 33 47 98 102 127 171 173 183 186 187 195 213 219 232 248 249 257 269 285 294 Locations in genome: 55527193 55527169 55527155 55527104 55527100 55527075 55527031 55527029 55527019 55527016 55527015 55527007 55526989 55526983 55526970 55526954 55526953 55526945 55526933 55526918 55526909 Upstream nucleotide (in genome): c t a c t t c t t a c c c c a a c c c t g Upstream nucleotide summary: a: 4, c: 10, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): n g g g g g g c g g a g t g g t a g g g t Downstream nucleotide summary: a: 2, c: 1, g: 14, t: 3, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 3, at: 1, ca: 2, cc: 0, cg: 6, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 1, tg: 5, tt: 0, other: 1 >chr14:55526908-55527193 (+) gatatggagtagccctcc-gttgcccaggctggagtgcagtggcgcaatctcggctcactgcaagctccgcctcccaggttcatgccattctcctgcctcagcctcccaagtagctgggactacaggcacccgccaccacactgggctaatcgtttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcttgacctcgtgatccgcctgcctcggcctcccaaagtgctgggattataggcgtgagccactgcacccggcca >DW422033:9-295 (-) ggtatggagtggccctccggttgcccgggctggagtgcggtggcgcggtctcggctcactgcaggctccgcctcccgggttcgtgccattctcctgcctcggcctcccgggtggctgggactgcgggcacccgccaccacattgggctaatcgtttttttgtatttttggtagagacggggtttcaccgtgttggccgggatggtctcgatctcttgacctcgtgatccgcctgcctcggcctcccaaggtgctgggattatgggcgtgagccactgcacccggccg End editing Edited EST: AI621196, type: ag Aligns to: chr14:103950501-103950749 (+-) All mismatches: ag (191), ag (195), ag (209), ag (210), ag (221), ag (242), ag (244), ag (276), ag (284), ag (286), ag (307), ag (359), ag (362), ag (367), ag (375), ag (384), ta (408), Editing mismatches: 16, all mismatches: 17, alignment length: 247, cluster length: 196, total number of As: 44 Locations in RNA: 191 195 209 210 221 242 244 276 284 286 307 359 362 367 375 384 Locations in genome: 103950749 103950745 103950731 103950730 103950719 103950697 103950695 103950663 103950655 103950653 103950632 103950579 103950576 103950571 103950563 103950554 Upstream nucleotide (in genome): g a a c c t a c c t c g c a t t Upstream nucleotide summary: a: 4, c: 6, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): n g a a g g t c g c g t c t g c Downstream nucleotide summary: a: 2, c: 4, g: 6, t: 3, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 2, ca: 1, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 2, tg: 2, tt: 0, other: 1 >chr14:103950501-103950749 (+) ttttttttttttctttttttctttttttttctgcgatggagtctcgctcttttacccaggctagagtgcaatggcacgatctcgggtcactgcaacctccatctcccgggttcatgcagttcttctgcctcagcctcccagtagctgggattacaggcacacaccaccacacctggctgatttttgtatttttaatagaaatggggtttcactaggccaggctggtctcaaattcctgacttcaagtga >AI621196:191-437 (-) ttttttttttttctttttttcttttttttactgcgatggagtctcgctcttttgcccaggctggagtgcagtggcgcggtctcgggtcactgca-cctccatctcccgggttcatgcagttcttctgcctcggcctcncagtagctgggattgcgggcacacgccaccacacctggctgatttttgtatttttagtggaa-tggggtttcactaggccgggctggtctcggattcctgacttcaggtgg End editing Edited EST: AL048200, type: ag Aligns to: chr14:103961543-103961823 (+-) All mismatches: ag (43), ag (51), ag (100), ag (101), ag (111), ag (122), ag (127), ag (128), ag (163), ag (165), ag (172), ag (178), ag (183), ag (184), ag (222), ag (231), ag (244), Editing mismatches: 17, all mismatches: 17, alignment length: 280, cluster length: 204, total number of As: 64 Locations in RNA: 43 51 100 101 111 122 127 128 163 165 172 178 183 184 222 231 244 Locations in genome: 103961782 103961774 103961724 103961723 103961713 103961702 103961697 103961696 103961661 103961659 103961652 103961646 103961641 103961640 103961602 103961592 103961579 Upstream nucleotide (in genome): c c a c a c a t t a t c a a a t c Upstream nucleotide summary: a: 7, c: 6, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): c c g a g g t a c t c t c a g g g Downstream nucleotide summary: a: 3, c: 5, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 3, at: 2, ca: 1, cc: 2, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr14:103961543-103961823 (+) tacgcctgtaatcccagcactttgggaggccaaggcaggtagatcaggtagatcactcaaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagcttgatgttgtggcacatgcttgtaattccagctatttggaagggtgaggcaagaggatggcttgaacccaggaggcgtaggttgcagagagccaagatcacaccattgcactccagcctgg-cgacagattgacactccatctcaaaaaaaa >AL048200:1-280 (-) tacgcctgtaatcccagcactttgggaggccaaggcgggtagatcaggtggatca-tcagggtcaggagttcaagaccagcctggccaacatggtgaggccccgtctctgctaaaagtgcaaaaattagcttgatgttgtggcacatgcttgtggttccggctatttggaggggtgaggcgggaggatggcttgaacccaggaggcgtaggttgcagagagccaagatca-gccattgcgctccagcctgggcgacagattgacactccatctcaaaaaaaa End editing Edited EST: AI888082, type: ag Aligns to: chr14:73419971-73420418 (+-) All mismatches: ag (20), ag (46), ag (52), ag (92), ag (116), ag (162), ag (165), ag (183), ag (191), ag (202), ag (203), ag (211), ag (235), ag (256), ag (257), Editing mismatches: 15, all mismatches: 15, alignment length: 448, cluster length: 238, total number of As: 69 Locations in RNA: 20 46 52 92 116 162 165 183 191 202 203 211 235 256 257 Locations in genome: 73420399 73420373 73420367 73420327 73420303 73420257 73420254 73420236 73420228 73420217 73420216 73420208 73420184 73420163 73420162 Upstream nucleotide (in genome): a c c g c a t t g a c c c a t Upstream nucleotide summary: a: 4, c: 6, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): a c t g g a c g g g a g a t a Downstream nucleotide summary: a: 5, c: 2, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 1, ca: 2, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr14:73419971-73420418 (+) gtgctgggattacaggcgtgagccaccacgcctggcatggattgttttatttcttaacctgggtggtgggtacatggctatatttagtttgtgataactcactgaactgtatccttacaatctgtacgttctatcaatgcaaaagtttattttaaaaaatattttttcgaagcacagtggctcatgcctgtaatctcaacactttgggaggccaaggcaggataatcgtttgagcccaggagttcaagaccagcctgagcaacatagcaagactccaatctctacaaaaaataaataattagccatgtgtggtggctcacacctgtgatcccagctacttgggaggctgagatgggaggattccttgagcctgggaggttgaggatgcattgagccatgatcacgccactgcactccagactgggcaaaagaacaagaccctgtctta >AI888082:1-448 (-) gtgctgggattacaggcgtgagccaccacgcctggcatggattgttttatttcttaacctgggtggtgggtacatggctatatttagtttgtgataactcactgaactgtatccttacaatctgtacgttctatcaatgcaaaagtttattttaaaaaatattttttcgaagcacagtggctcatgcctgtggtctcaacactttgggaggccgaggcaggataatcgtttgagcccgggagttcgggaccagcctgggcaacatggcaagactccaatctctgcagaaaataaataattagccatgtgtggtggctcacacctgtgatcccggctacttgggaggctgagatggggggattccttgagcctgggaggttgaggatgcattgagccgtgatcgcgccactgcactccagactgggcaagagaacaagaccctgtctta End editing Edited EST: AI888092, type: ag Aligns to: chr14:73419962-73420418 (+-) All mismatches: ag (20), ag (46), ag (52), ag (92), ag (116), ag (162), ag (165), ag (183), ag (191), ag (202), ag (203), ag (211), ag (235), ag (256), ag (257), Editing mismatches: 15, all mismatches: 15, alignment length: 457, cluster length: 238, total number of As: 69 Locations in RNA: 20 46 52 92 116 162 165 183 191 202 203 211 235 256 257 Locations in genome: 73420399 73420373 73420367 73420327 73420303 73420257 73420254 73420236 73420228 73420217 73420216 73420208 73420184 73420163 73420162 Upstream nucleotide (in genome): a c c g c a t t g a c c c a t Upstream nucleotide summary: a: 4, c: 6, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): a c t g g a c g g g a g a t a Downstream nucleotide summary: a: 5, c: 2, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 1, ca: 2, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr14:73419962-73420418 (+) cctcctaaagtgctgggattacaggcgtgagccaccacgcctggcatggattgttttatttcttaacctgggtggtgggtacatggctatatttagtttgtgataactcactgaactgtatccttacaatctgtacgttctatcaatgcaaaagtttattttaaaaaatattttttcgaagcacagtggctcatgcctgtaatctcaacactttgggaggccaaggcaggataatcgtttgagcccaggagttcaagaccagcctgagcaacatagcaagactccaatctctacaaaaaataaataattagccatgtgtggtggctcacacctgtgatcccagctacttgggaggctgagatgggaggattccttgagcctgggaggttgaggatgcattgagccatgatcacgccactgcactccagactgggcaaaagaacaagaccctgtctta >AI888092:1-457 (-) cctcctaaagtgctgggattacaggcgtgagccaccacgcctggcatggattgttttatttcttaacctgggtggtgggtacatggctatatttagtttgtgataactcactgaactgtatccttacaatctgtacgttctatcaatgcaaaagtttattttaaaaaatattttttcgaagcacagtggctcatgcctgtggtctcaacactttgggaggccgaggcaggataatcgtttgagcccgggagttcgggaccagcctgggcaacatggcaagactccaatctctgcagaaaataaataattagccatgtgtggtggctcacacctgtgatcccggctacttgggaggctgagatggggggattccttgagcctgggaggttgaggatgcattgagccgtgatcgcgccactgcactccagactgggcaagagaacaagaccctgtctta End editing Edited EST: CA427818, type: ag Aligns to: chr15:50660384-50660786 (+-) All mismatches: ag (52), ag (62), ag (97), ag (106), ag (111), ag (129), ag (138), ag (139), ag (145), ag (165), ag (178), ag (179), ag (180), ag (194), ag (196), ag (197), ag (229), ag (234), ag (239), ag (261), ag (358), Editing mismatches: 21, all mismatches: 21, alignment length: 404, cluster length: 306, total number of As: 88 Locations in RNA: 52 62 97 106 111 129 138 139 145 165 178 179 180 194 196 197 229 234 239 261 358 Locations in genome: 50660741 50660731 50660697 50660688 50660683 50660665 50660656 50660655 50660649 50660629 50660616 50660615 50660614 50660600 50660598 50660597 50660565 50660560 50660555 50660533 50660436 Upstream nucleotide (in genome): t c a a a t a t c t a a t a a c c g c t c Upstream nucleotide summary: a: 8, c: 6, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): c t c t g c t a c c a a a c a a g g c g t Downstream nucleotide summary: a: 6, c: 7, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 1, at: 2, ca: 1, cc: 2, cg: 1, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 3, tg: 1, tt: 0, other: 0 >chr15:50660384-50660786 (+) cagctactcaggaggcttgcctgagcccagaagtttgagactgcagtgagccatgatattgccagcctgggtgacagagcaagaccttgtctcaagaaaaaaaaaaaaaattgccaattgcgatggctcacgcctgtaatcccagcactaggaggccgaggtgggtgaatcacctgaggtcaggagttttgagaccagcctggccaacgtggcaaaaccccgtctctactaaaaatgcaaaaattaccgggacgtgttggtgagcacctgtaatccctgctactcgggaggctgaggcaagagaatctcttgaaccc-agggggtggaggttgcactgagccgagatcatgccattgtacttcacctgggcaacaagagggaaactgtctccaaaaaaaaaaaa >CA427818:7-410 (-) cagctactcaggaggcttgcctgagcccagaagtttgagactgcagtgagccgtgatattgccagcctgggtgacagagcaagaccttgtctcaagaaaaaaaaaaaaaattgccaattgcgatggctcacgcctgtaatcccagcactgggaggccgaggtgggtgaatcgcctggggtcgggagttttgagaccagcctggccaacgtggcggagccccgtctctactgggaatgcaaaaattgccgggacgtgttggtgagcgcctgtggtccctgctgctcgggaggctgaggcaggagagtctcttgagccccagggggtggaggttgcactgagccgagatcgtgccattgtgcttcacctgggcaacaagagggaaactgtctccaaaaaaaaaaaa End editing Edited EST: CA428375, type: ag Aligns to: chr15:50660384-50660786 (+-) All mismatches: ag (52), ag (62), ag (96), ag (105), ag (110), ag (128), ag (137), ag (138), ag (144), ag (164), ag (177), ag (178), ag (179), ag (193), ag (195), ag (196), ag (228), ag (233), ag (238), ag (260), ag (357), Editing mismatches: 21, all mismatches: 21, alignment length: 403, cluster length: 306, total number of As: 88 Locations in RNA: 52 62 96 105 110 128 137 138 144 164 177 178 179 193 195 196 228 233 238 260 357 Locations in genome: 50660741 50660731 50660697 50660688 50660683 50660665 50660656 50660655 50660649 50660629 50660616 50660615 50660614 50660600 50660598 50660597 50660565 50660560 50660555 50660533 50660436 Upstream nucleotide (in genome): t c a a a t a t c t a a t a a c c g c t c Upstream nucleotide summary: a: 8, c: 6, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): c t c t g c t a c c a a a c a a g g c g t Downstream nucleotide summary: a: 6, c: 7, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 1, at: 2, ca: 1, cc: 2, cg: 1, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 3, tg: 1, tt: 0, other: 0 >chr15:50660384-50660786 (+) cagctactcaggaggcttgcctgagcccagaagtttgagactgcagtgagccatgatattgccagcctgggtgacagagcaagaccttgtctcaagaaaaaaaaaaaaaattgccaattgcgatggctcacgcctgtaatcccagcactaggaggccgaggtgggtgaatcacctgaggtcaggagttttgagaccagcctggccaacgtggcaaaaccccgtctctactaaaaatgcaaaaattaccgggacgtgttggtgagcacctgtaatccctgctactcgggaggctgaggcaagagaatctcttgaacccagggggtggaggttgcactgagccgagatcatgccattgtacttcacctgggcaacaagagggaaactgtctccaaaaaaaaaaaa >CA428375:7-409 (-) cagctactcaggaggcttgcctgagcccagaagtttgagactgcagtgagccgtgatattgccagcctgggtgacagagcaagaccttgtctcaagaaaaaaaaaaaaaattgccaattgcgatggctcacgcctgtaatcccagcactgggaggccgaggtgggtgaatcgcctggggtcgggagttttgagaccagcctggccaacgtggcggagccccgtctctactgggaatgcaaaaattgccgggacgtgttggtgagcgcctgtggtccctgctgctcgggaggctgaggcaggagagtctcttgagcccagggggtggaggttgcactgagccgagatcgtgccattgtgcttcacctgggcaacaagagggaaactgtctccaaaaaaaaaaaa End editing Edited EST: AA513852, type: ag Aligns to: chr15:72890670-72891063 (+-) All mismatches: ag (21), ag (58), ag (63), ag (67), ag (87), ag (119), ag (128), ag (129), ag (151), ag (155), ag (158), ag (161), ag (168), ag (173), ag (184), ag (190), ag (192), ag (207), gt (208), ag (215), ag (218), ag (237), ga (242), ag (263), ag (264), Editing mismatches: 23, all mismatches: 25, alignment length: 393, cluster length: 245, total number of As: 65 Locations in RNA: 21 58 63 67 87 119 128 129 151 155 158 161 168 173 184 190 192 207 215 218 237 263 264 Locations in genome: 72891043 72891005 72891000 72890996 72890976 72890944 72890935 72890934 72890912 72890908 72890905 72890902 72890895 72890890 72890879 72890873 72890871 72890856 72890848 72890845 72890826 72890800 72890799 Upstream nucleotide (in genome): a g g c a t a t c t a t a t a t c g g c c a t Upstream nucleotide summary: a: 7, c: 5, g: 4, t: 7, other: 0 Downstream nucleotide (in genome): g g g g c c t a g g t a a c c g t c g g g t a Downstream nucleotide summary: a: 4, c: 5, g: 10, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 3, ca: 0, cc: 0, cg: 4, ct: 1, ga: 0, gc: 1, gg: 3, gt: 0, ta: 3, tc: 2, tg: 2, tt: 0, other: 0 >chr15:72890670-72891063 (+) gttgttgtttgctagagtgggaggtatattccttgtgactttgttcatatcactagtgaatttcagaagtaggagtttatttttttaataaaaaatttttttaggtcaggcacagtgtctcatgcctgtaatcccagcactttgggaggccgaggcaggtggatcacctgagatcaggagtttgagaccagcctggccaacatagtgaaaccccaactctactaaaaatactaaaattagccaggtgtggtggtgggcgcctgtaatcccagctacttgagagactgagtcaggagatttgcttgaacctgggaggcggaggttgcagtgagccgagattgtgccactgcactccagcctgggtgacagagcaagactccctctcaaaaaaaaa >AA513852:1-393 (-) gttgttgtttgctagagtgggaggtatattccttgtgactttgttcatatcactagtgaatttcagaagtaggagtttatttttttaataaaaaatttttttaggtcaggcacagtgtctcatgcctgtggtcccagcactttgggaggccaaggcgggtggatcacctgagatcgggggtttgatgccagcctggccaacgtggtgaagccccaactctgctaagaatactgaagttggccgggtgtggtggtgggcgcctgtggtcccagctgcttgagagactgagtcaggagatttgcttgagcctgggaggcggaggttgcggtgggccgggattg-gccactgcactccagcctgggtgacagagcaggactccctctcaaaaaaaaa End editing Edited EST: AA668894, type: ag Aligns to: chr15:42647961-42648224 (+-) All mismatches: ag (62), ag (76), ag (77), ag (85), ag (144), ag (147), ag (148), ag (151), ag (184), ag (193), ag (205), ag (208), ag (218), Editing mismatches: 13, all mismatches: 13, alignment length: 264, cluster length: 157, total number of As: 48 Locations in RNA: 62 76 77 85 144 147 148 151 184 193 205 208 218 Locations in genome: 42648163 42648149 42648148 42648140 42648081 42648078 42648077 42648074 42648041 42648032 42648020 42648017 42648007 Upstream nucleotide (in genome): a a g a t a a c a a g c c Upstream nucleotide summary: a: 7, c: 3, g: 2, t: 1, other: 0 Downstream nucleotide (in genome): g c a t g t a a c c g g c Downstream nucleotide summary: a: 3, c: 4, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 1, at: 2, ca: 1, cc: 1, cg: 1, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr15:42647961-42648224 (+) ttacgcctgtaatcccagcactttgggaggccgaggcagggggttcacttgagttcaggagttcgagaccaacctggccaacatggtgaagccccatctctactaaaaataacaaaaattagcagggcatggtggcacatgcctgtaatctcagctgttcaggagactgaggcaggagaatcgcttgaacccgggaggcggaagttgcagtgagctaagattgcaccagtgcactccagcctggtgacagagagagactccatc >AA668894:1-264 (-) ttacgcctgtaatcccagcactttgggaggccgaggcagggggttcgcttgagttcgggggttcgagaccagcctggccagcatggtgaagccccatctctactaaaaataacgaaggttggcagggcatggtggcacatgcctgtaatctcagctgttcaggagactgaggcaggagagtcgcttgggcccgggaggcggaggttgcagtgagctaagattgcaccagtgcactccagcctggtgacagagagagactccatc End editing Edited EST: N27325, type: ag Aligns to: chr16:58374585-58374835 (+-) All mismatches: ag (91), ag (108), ag (118), ag (144), ag (147), ag (151), ag (159), ag (169), ag (184), ag (200), ag (235), ag (243), ag (251), Editing mismatches: 13, all mismatches: 13, alignment length: 251, cluster length: 161, total number of As: 43 Locations in RNA: 91 108 118 144 147 151 159 169 184 200 235 243 251 Locations in genome: 58374745 58374728 58374718 58374692 58374689 58374685 58374677 58374667 58374652 58374636 58374601 58374593 58374585 Upstream nucleotide (in genome): c t t t a a a c a c g c n Upstream nucleotide summary: a: 4, c: 4, g: 1, t: 3, other: 1 Downstream nucleotide (in genome): g c g g t a a t c a g c t Downstream nucleotide summary: a: 3, c: 3, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 1, ca: 1, cc: 1, cg: 1, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 1 >chr16:58374585-58374835 (+) atcccagcactttgggaggccgaggcaggtggatcacgaggtcaggagatcaagaccatcctggctaacacggtgaaaccccatctctactaaaaatgcaaaaaattagccgggcgtggtggtgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggtgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcattccagcctgggcgacagacagactcatctc >N27325:1-251 (-) gtcccagcgctttggggggccgaggcaggtggatcacgaggtcaggagatcgagaccatcctggctagcacggtgaaaccccgtctctactagaaatgcagaaagttggccgggcgtggtggtgggcgcctgtggtcccagctgctcaggaggctgaggcgggagaatggtgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcattccagcctgggcgacagacagactcatctc End editing Edited EST: DB314164, type: ag Aligns to: chr16:70187702-70188058 (+-) All mismatches: ag (45), ag (68), ag (75), ag (100), ag (127), ag (130), ag (131), ag (132), ag (160), ag (165), ag (166), ag (170), ag (195), ag (226), ag (232), ag (239), ag (251), Editing mismatches: 17, all mismatches: 17, alignment length: 358, cluster length: 206, total number of As: 60 Locations in RNA: 45 68 75 100 127 130 131 132 160 165 166 170 195 226 232 239 251 Locations in genome: 70188014 70187991 70187984 70187959 70187932 70187929 70187928 70187927 70187899 70187895 70187894 70187890 70187865 70187834 70187828 70187821 70187809 Upstream nucleotide (in genome): c c c t a a a c c a t t c a a c c Upstream nucleotide summary: a: 6, c: 8, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): c g g t t a a a g c a g a c t c c Downstream nucleotide summary: a: 5, c: 5, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 0, at: 2, ca: 2, cc: 3, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 1, other: 0 >chr16:70187702-70188058 (+) ctttgggaggctgaggcgggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggcaaaacccgtctctactaaaaatacaaaaagtaggccgggcacggtggctcacacctgtaatcccaacactttgggaggccaaggcgggcggatcacaagttcaggagatcgagatcatcctagctaacac-agtgaaaccccgtctctactaaaaatacaaaaaattagccgggtgtggttgcgggcgcctatagtcaggagaatggcgtgaacccaggaggcagaggttgcagtgagccgagatcacgccactgcactccagcctgggcgacagagcgagactccgtctc >DB314164:1-358 (-) ctttgggaggctgaggcgggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggcaaaacccgtctctactaaaaatacaaaaagtaggccgggcgcggtggctcacgcctgtagtcccagcactttgggaggccaaggcgggcggatcacgagttcaggagatcgagatcatcctggctggcacaggtgaaaccccgtctctactaaaaatacgggaagttagccgggtgtggttgcgggcgcctgtagtcaggagaatggcgtgaacccgggaggcggaggttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactccgtctc End editing Edited EST: DB317476, type: ag Aligns to: chr16:25831046-25831331 (+-) All mismatches: ag (30), ag (40), ag (48), ag (50), ag (55), ga (67), ag (79), ag (85), ag (88), ag (94), ag (111), ag (115), ag (120), ag (121), tg (146), ag (147), ag (150), ag (153), ag (154), ag (186), ag (187), Editing mismatches: 19, all mismatches: 21, alignment length: 286, cluster length: 158, total number of As: 44 Locations in RNA: 30 40 48 50 55 79 85 88 94 111 115 120 121 147 150 153 154 186 187 Locations in genome: 25831302 25831292 25831284 25831282 25831277 25831253 25831247 25831244 25831238 25831221 25831217 25831212 25831211 25831185 25831182 25831179 25831178 25831146 25831145 Upstream nucleotide (in genome): c c g g g a c a c t t a t t a a c a c Upstream nucleotide summary: a: 6, c: 6, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): g c t g g c c t g c g c a t t a a c a Downstream nucleotide summary: a: 4, c: 6, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 0, at: 2, ca: 2, cc: 2, cg: 2, ct: 0, ga: 0, gc: 0, gg: 2, gt: 1, ta: 1, tc: 1, tg: 1, tt: 1, other: 0 >chr16:25831046-25831331 (+) aatagacaggctgagggatttgacattcattggcctgtcttttccgggactggaatcccgaggaaatgcccattaagaggaaaggatttcagtttggccaacatggtgaaaccccgtctctattaaaaatacaaaaattatccgggaatggtggtgggcgcctgtaactctagctacttgggaggctgaggcaggagaatcacttgaacccgggaggcagaggctgcagtgagccgagatcgtgccactgcactccagcctgggtgacagagtgatactctgtctc >DB317476:1-286 (-) aatanacaggctgagggatttgacattcattggcctgtcttttccgggactggaatcccgaggaaatgcccattaanaggaaaggatttcagtttggccggcatggtgaaaccccgtctctattaaaaatacggaagttggccgggaatggtggtgggcgcctgtggctctggctgcttgggaggctnaggcggganagtcgcttgagcccgggaggcaaaggctgcagtgggccggggtcgtgccgctgcactccggcctgggtgacagagtgatactctgtctc End editing Edited EST: DB333629, type: ag Aligns to: chr16:75085812-75086298 (+-) All mismatches: ag (12), ag (68), ag (75), ag (80), ag (90), ag (121), ag (150), ag (151), ag (152), ag (158), ag (209), ag (212), ag (216), ag (236), ag (252), Editing mismatches: 15, all mismatches: 15, alignment length: 487, cluster length: 241, total number of As: 64 Locations in RNA: 12 68 75 80 90 121 150 151 152 158 209 212 216 236 252 Locations in genome: 75086287 75086231 75086224 75086219 75086209 75086178 75086149 75086148 75086147 75086141 75086090 75086087 75086083 75086063 75086047 Upstream nucleotide (in genome): c c c g a t a a a t a c a c c Upstream nucleotide summary: a: 6, c: 6, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g g g g a g t a a c g g c a g Downstream nucleotide summary: a: 4, c: 2, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 1, ca: 1, cc: 0, cg: 5, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr16:75085812-75086298 (+) agtaaactatagacatctgtatacttatctttaaatatttcaatatgtacatcattaactggtgttaagtatttctttatagcttttcctcttggtggaaagtttacatacaaagaaatgtacacattttaagtacatgttcactgggttttgacaagtacatgcatcagcaaaacccaaaaccctatcaagatagagaatgtgcccgggcgtggtggctcacgcctgtttttccagcactttgggaggccaaggctggaggattgcttgaacccagaagttcgagaccaacttgggcaacatggtgaaaccccatctctaccaaaaatacataaaaattacctgggtgtggtggcgtgcacctgtagtctcagctgcttgggaggctgaggtgggaaaattgcttgagcccaggaggcagaggttgcagtgagccagcatggcaccactgcattccagcctgagtgacagagccagaccctgtctc >DB333629:1-487 (-) agtaaactatagacatctgtatacttatctttaaatatttcaatatgtacatcattaactggtgttaagtatttctttanagcttttcctcttggtggaaagtttacatacaaagaaatgtacacattttaagtacatgttcactgggttttgacaagtacatgcatcagcaaaacccaaaaccctatcaagatagagaatgtgcccgggcgtggtggctcacgcctgtttttccggcactttgggaggccgaggctggaggattgcttgagcccggaggttcgagaccaacttgggcaacatggtgaaaccccatctctaccaaaaatgcataagggttacctgggtgtggtggcgtgcacctgtggtctcagctgcttgggaggctgaggtgggagaattgcttgggcccgggaggcggaggttgcagtgagccagcatggcaccactgcattccagcctgagtgacagagccggaccctgtctc End editing Edited EST: DB300328, type: ag Aligns to: chr16:68627850-68628327 (+-) All mismatches: ag (139), ag (141), ag (178), ag (214), ag (230), ag (269), ag (276), ag (282), ag (292), ag (320), cg (329), ag (341), ag (360), ag (366), Editing mismatches: 13, all mismatches: 14, alignment length: 479, cluster length: 228, total number of As: 42 Locations in RNA: 139 141 178 214 230 269 276 282 292 320 341 360 366 Locations in genome: 68628189 68628187 68628150 68628114 68628098 68628059 68628052 68628046 68628036 68628008 68627987 68627968 68627962 Upstream nucleotide (in genome): t c c t c c c t t c a c c Upstream nucleotide summary: a: 1, c: 8, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a t c g g c c c g c g c g Downstream nucleotide summary: a: 1, c: 6, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 5, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr16:68627850-68628327 (+) tcttgaaagtgattgtgcagccccagtaaagccttcagatgactgcagtcccagcaacatc-ttttttttttgtttgagatggagtctcgctctgtcgcccaggctggagtgcagtggcacgatctccgctcactgcaagctccgcctcccgggttcacaccattctcctgcctcagcctcctgagtagctgggactacaggcacccgccaccatgcccggctaatttttttgtatttttagtagagacagggtttcatcctgttagccaggatggtctcgatctcctgacctcgtgatccacctgcctcggcctcccaaagtgctgggattacaggcataagccaccatgcccggcctccagcaacatcttaaccataaccttgtcagagaccccaagccaaaaccactcagtcaagccacttgcaaattttttatccatagaaactatgtgagataataaatgtctgtttttaagcc >DB300328:1-479 (-) tcttgaaagtgattgtgcagccccagtaaagccttcagatgantgcagtcccagcaacatctttttttttttgtttgagatggagtctcgctctgtcgcccaggctggagtgcggtggcgcgatctccgctcactgcaggctccgcctccggggttcacgccattctcctgcctcagcctcctgagtggctgggactgcaggcgcccgccgccatgcccggctaatttttttgtatttttagtagagacggggtttcatcctgttggccaggatggtctcgatctcctgacctcgtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgcccggcctccagcaacatcttaaccataaccttgtcagagaccccaagccaaaaccactcagtcaagccacttgcaaattttttatccatagaaactatgtgagataataaatgtctgtttttaagcc End editing Edited EST: BM664605, type: ag Aligns to: chr16:29383566-29383989 (+-) All mismatches: ag (241), ag (316), ag (330), ag (334), ag (350), ag (356), ag (362), ag (382), ag (392), ag (398), ag (402), ag (418), ag (429), ag (433), ag (436), ag (442), Editing mismatches: 16, all mismatches: 16, alignment length: 425, cluster length: 201, total number of As: 60 Locations in RNA: 241 316 330 334 350 356 362 382 392 398 402 418 429 433 436 442 Locations in genome: 29383766 29383692 29383678 29383674 29383658 29383652 29383646 29383626 29383616 29383610 29383606 29383590 29383579 29383575 29383572 29383566 Upstream nucleotide (in genome): a c c g a c g t t c c t a t t n Upstream nucleotide summary: a: 3, c: 5, g: 2, t: 5, other: 1 Downstream nucleotide (in genome): a t g t c c g c g c g g t a c t Downstream nucleotide summary: a: 2, c: 5, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 1, ca: 0, cc: 2, cg: 2, ct: 1, ga: 0, gc: 0, gg: 1, gt: 1, ta: 1, tc: 2, tg: 2, tt: 0, other: 1 >chr16:29383566-29383989 (+) atccctactaaaaatacaaaaattagctgggcgtggtggcaggcacctgtagtcccagctactcgggaggctgaggcaggagaatcacctgaacctgggaggcggaggatgcagtgcgctgagatcatgccactgcactccagcctgggtgacagagcgagaccctgtctcaaaaaaaaaaaaaa-tcacctggcttgttaaaacagattcctggaccccaccccagaatttgattcaggttgggagtgaggcctgtgaatttgcatttctagcaaattcccaggtgatgctcatgccgctggtcccaaaccacactgtgaagtgccagttccagactaggagactccaaagagacactggagccaaccacaatgtgcaaacctgattgggtcctgatttggaaattaaacatctttaaaatgca >BM664605:18-442 (-) gtccctgctgaaagtacaaaaattggctgggcgtggtggcgggcgcctgtggtcccagctgctcgggaggctgaggcaggggaatcgcctgagcctgggaggcggagggtgcggtgcgctgagatcgtgccactgcactccagcctgggtgacagagcgagaccctgtctcaaaaaaaaaaaaaaatcacctggcttgttagaacagattcctggaccccaccccagaatttgattcaggttgggagtgaggcctgtgaatttgcatttctagcaaattcccaggtgatgctcatgccgctggtcccaaaccacactgtgaagtgccagttccagactaggagactccaaagagacactggagccaaccacaatgtgcaaacctgattgggtcctgatttggaaattaaacatctttaaaatgca End editing Edited EST: BF883626, type: ag Aligns to: chr16:1410322-1410691 (+-) All mismatches: ag (116), ag (121), ag (125), ag (145), ag (146), ag (151), ag (154), ag (160), ag (164), ag (177), ag (181), ag (312), ag (320), ag (321), ag (327), Editing mismatches: 15, all mismatches: 15, alignment length: 369, cluster length: 212, total number of As: 52 Locations in RNA: 116 121 125 145 146 151 154 160 164 177 181 312 320 321 327 Locations in genome: 1410575 1410570 1410566 1410546 1410545 1410540 1410537 1410531 1410527 1410514 1410510 1410379 1410371 1410370 1410364 Upstream nucleotide (in genome): g g c a g c a c g t c c a t c Upstream nucleotide summary: a: 3, c: 6, g: 4, t: 2, other: 0 Downstream nucleotide (in genome): g g g c a c t g g c g c t a c Downstream nucleotide summary: a: 2, c: 5, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 2, ca: 0, cc: 3, cg: 3, ct: 0, ga: 1, gc: 0, gg: 3, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr16:1410322-1410691 (+) taaatctgaagttagtctttcaggccgggcatagtggctcacacctgtaatcccagcacttgggaggccaaggtggacggatcacttcaggtccacagttgcagaccagcctggccaacacagtgaaaccccgcctctgctgaagatacaaaaattagctgggcgtggtggcgggcacgtgggatcccagctactcgggaggctgaggcaggggaatcacttgaacccaggaggcggaggttgcagtgagccgagatcgcgccactgcatttcaccttgggtgacagagtgagactgtctccaaaagaaaaaaaagaatctaatgcctgatgagctgaggtggaacagtttcatccccaaaccacccatc >BF883626:1-369 (-) taaatctgaagttagtctttcaggccgggcatagtggctcacgcctgtggtcccagcgcttgggaggccaaggtggacggatcacttcaggtccacagttgcagaccagcctggccaacacagtgaaaccccgcctctgctgaagatacaaaaattagctgggcgtggtggcgggcacgtgggatcccggctgctcgggaggctggggcgggggagtcgcttgggcccaggaggcggaggttgcggtgggccgggatcgcgccactgcatttcaccttgggtgacagagtgagactgtctccaaaagaaaaaaaagaatctaatgcctgatgagctgaggtgga-cagtttcatccccaaaccacccatc End editing Edited EST: AA531266, type: ag Aligns to: chr16:85484520-85484687 (+-) All mismatches: ag (12), ag (20), ag (28), ag (59), ag (63), ag (67), ag (76), ag (83), ag (107), ag (116), ag (119), ag (128), ag (131), ag (157), ag (158), ag (159), at (160), ag (162), ag (165), Editing mismatches: 18, all mismatches: 19, alignment length: 167, cluster length: 155, total number of As: 49 Locations in RNA: 12 20 28 59 63 67 76 83 107 116 119 128 131 157 158 159 162 165 Locations in genome: 85484676 85484668 85484660 85484629 85484625 85484621 85484612 85484605 85484581 85484572 85484569 85484560 85484557 85484529 85484528 85484527 85484524 85484522 Upstream nucleotide (in genome): c c g c g c c c c t t a t a a a t a Upstream nucleotide summary: a: 5, c: 7, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): t a c a g g g g a g c t t a a a c t Downstream nucleotide summary: a: 6, c: 3, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 0, at: 2, ca: 3, cc: 0, cg: 3, ct: 1, ga: 0, gc: 1, gg: 1, gt: 0, ta: 0, tc: 2, tg: 1, tt: 1, other: 0 >chr16:85484520-85484687 (+) aaat-acaaaaattagctgggcatggtggtgtgtgcctataatcccagctactagggaggccaaggcaggagaattgcttgaaaccaggaagcagaggttgcagtgagccaagatcgcaccactgcactcaagcctgggtgacaagagcaaaacgccatctcaaaaaaa >AA531266:1-167 (-) aagtagctgggatt-gc-gggcatggtggtgtgtgcctgtagtcccagctgctggggaggccgaggcaggagaattgcttgaaaccgggaagcggaggttgcggtgggccgagatcgcaccactgcactcaagcctgggtggcaagagcgaaacgccgtctcaaaaaaa End editing Edited EST: AA533733, type: ag Aligns to: chr16:85484431-85484691 (+-) All mismatches: ag (63), ag (67), ag (87), ag (91), ag (111), ag (120), ag (123), ag (132), ag (135), ag (172), ag (177), ag (240), Editing mismatches: 12, all mismatches: 12, alignment length: 261, cluster length: 178, total number of As: 50 Locations in RNA: 63 67 87 91 111 120 123 132 135 172 177 240 Locations in genome: 85484629 85484625 85484605 85484601 85484581 85484572 85484569 85484560 85484557 85484520 85484515 85484452 Upstream nucleotide (in genome): c g c a c t t a t a t a Upstream nucleotide summary: a: 4, c: 3, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): a g g a a g c t t a c g Downstream nucleotide summary: a: 4, c: 2, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 1, ca: 2, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 2, tg: 1, tt: 1, other: 0 >chr16:85484431-85484691 (+) ccgaggtgggccgatcacctaaggttaggcgttcgagaccagcctggccaatatggtgaaaccatccccctgccccctgtctctactaaaaatacaaaaattagctgggcatggtggtgtgtgcctataatcccagctactagggaggccaaggcaggagaattgcttgaaaccaggaagcagaggttgcagtgagccaagatcgcaccactgcactcaagcctgggtgacaagagcaaaacgccatctcaaaaaaaaaaa >AA533733:1-261 (-) ccgaggtgggccgatcacctagggttaggcgttcgagaccagcctggccaatatggtgaaaccatccccctgccccctgtctctgctaagaatacaaaaattagctgggcatggtggtgtgtgcctgtagtcccagctgctggggaggccgaggcaggagaattgcttgagaccgggaagcagaggttgcagtgggccgagatcgcaccactgcactcaagcctgggtgacaagagcaaaacgccatctcaaaaaaaaaaa End editing Edited EST: AA555267, type: ag Aligns to: chr16:85484431-85484691 (+-) All mismatches: ag (63), ag (67), ag (87), ag (91), ag (111), ag (120), ag (123), ag (132), ag (135), ag (172), ag (177), ag (240), Editing mismatches: 12, all mismatches: 12, alignment length: 261, cluster length: 178, total number of As: 50 Locations in RNA: 63 67 87 91 111 120 123 132 135 172 177 240 Locations in genome: 85484629 85484625 85484605 85484601 85484581 85484572 85484569 85484560 85484557 85484520 85484515 85484452 Upstream nucleotide (in genome): c g c a c t t a t a t a Upstream nucleotide summary: a: 4, c: 3, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): a g g a a g c t t a c g Downstream nucleotide summary: a: 4, c: 2, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 1, ca: 2, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 2, tg: 1, tt: 1, other: 0 >chr16:85484431-85484691 (+) ccgaggtgggccgatcacctaaggttaggcgttcgagaccagcctggccaatatggtgaaaccatccccctgccccctgtctctactaaaaatacaaaaattagctgggcatggtggtgtgtgcctataatcccagctactagggaggccaaggcaggagaattgcttgaaaccaggaagcagaggttgcagtgagccaagatcgcaccactgcactcaagcctgggtgacaagagcaaaacgccatctcaaaaaaaaaaa >AA555267:1-261 (-) ccgaggtgggccgatcacctagggttaggcgttcgagaccagcctggccaatatggtgaaaccatccccctgccccctgtctctgctaagaatacaaaaattagctgggcatggtggtgtgtgcctgtagtcccagctgctggggaggccgaggcaggagaattgcttgagaccgggaagcagaggttgcagtgggccgagatcgcaccactgcactcaagcctgggtgacaagagcaaaacgccatctcaaaaaaaaaaa End editing Edited EST: AI810846, type: ag Aligns to: chr16:48387131-48387411 (+-) All mismatches: ag (1), ag (2), ag (57), ag (58), ag (116), ag (134), ag (142), ag (147), ag (148), ag (151), ag (153), ag (154), ag (174), ag (196), ag (197), ag (205), ag (210), ag (211), Editing mismatches: 18, all mismatches: 18, alignment length: 281, cluster length: 211, total number of As: 60 Locations in RNA: 1 2 57 58 116 134 142 147 148 151 153 154 174 196 197 205 210 211 Locations in genome: 48387411 48387410 48387355 48387354 48387296 48387278 48387270 48387265 48387264 48387261 48387259 48387258 48387238 48387216 48387215 48387207 48387202 48387201 Upstream nucleotide (in genome): a a a c t c t a a t a a c a c c a t Upstream nucleotide summary: a: 9, c: 5, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): n a g a g t g a a c t a a g a g g a Downstream nucleotide summary: a: 8, c: 1, g: 6, t: 2, other: 1 Dinucleotide summary: aa: 4, ac: 0, ag: 3, at: 1, ca: 3, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 1 >chr16:48387131-48387411 (+) tctgggctgggcatggtggctcacgcctgtaaccctagcactttaggaaatcgaggcgagtggatcacttaagctcaggagttcaaggccagcctgggcaacatggcaaaaccccatttctacaaaaaatacaaaaattagctgggcatggtggcacccgcctgtagtccagctacttgaggctgagatgggaggatgagggaggtcggggctgcagtgagccaagatcacgccactgcactccagcaccctgggcgacagagtgagaccctgtctcaaaa >AI810846:1-281 (-) tctgggctgggcatggtggctcacgcctgtaaccctagcactttaggaaatcgaggcgagtggatcacttgggctcgggagttcggggccagcctgggcaacatggcgaaaccccatttctacaaaaggtgcaggaattggctgggcgtggtggcacccgcctgtggtccagctacttgaggctgagatgggaggatgagggaggtcggggctgcagtgagccgggatcacgccactgcactccagcaccctgggcgacagagtgagaccctgtctcaagg End editing Edited EST: DB352453, type: ag Aligns to: chr17:73090375-73090779 (+-) All mismatches: ag (20), ag (67), ag (74), ag (78), ag (87), ag (93), ag (97), ag (106), ag (110), ag (120), ag (146), ag (149), ag (150), ag (174), ag (176), ag (178), ag (184), ag (185), ag (188), ag (194), ag (199), ag (205), ag (213), ag (218), ag (223), ag (253), ag (254), ag (262), ag (269), Editing mismatches: 29, all mismatches: 29, alignment length: 405, cluster length: 250, total number of As: 59 Locations in RNA: 20 67 74 78 87 93 97 106 110 120 146 149 150 174 176 178 184 185 188 194 199 205 213 218 223 253 254 262 269 Locations in genome: 73090760 73090713 73090706 73090702 73090693 73090687 73090683 73090674 73090670 73090660 73090634 73090631 73090630 73090606 73090604 73090602 73090596 73090595 73090592 73090586 73090581 73090575 73090567 73090562 73090557 73090527 73090526 73090518 73090511 Upstream nucleotide (in genome): c c c a a c g c t t t a a a g g a c g c g g g c c a t t g Upstream nucleotide summary: a: 7, c: 9, g: 8, t: 5, other: 0 Downstream nucleotide (in genome): a g g c t g g g c a g t a c a g c a c g g g g c g t a c t Downstream nucleotide summary: a: 6, c: 7, g: 12, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 0, at: 3, ca: 2, cc: 1, cg: 6, ct: 0, ga: 1, gc: 1, gg: 5, gt: 1, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr17:73090375-73090779 (+) ttccctggaggtgctgggagctgggaaatgtatgcggctgtgaattattaatattttggagaccctcactagggcagggagtggcttcaggataggaaaggggacgcaaggaagacaccaggaatggccgggcgcgatggcttacgcctgtaatcccagcactttgggaggccgaggcggtcagatcacctgaggtcgggagtttgagaccagcctgaccaacatggagaaaccctgtctctactgaaaatacaaaattagctgggcgtggtggcgggtgcctgtaatcccagctactcaggaggctgaggcaggagaatctcttgaacccaggaggcagaggttgcggtgagctgagatggtgccattgcactccagcctgggcaacaagagtgaaactgtctc >DB352453:1-405 (-) ttccctggaggtgctggganctgggaaatgtatncggctgtgaattattaatattttggagaccctcactagggcagggagtggcttcaggataggaaaggggacgcaaggaagacaccaggaatggccgggcncggtggcttgcgcctgtggtcccagcactttgggaggccgaggcggtcggatcgcctggggtcgggggtttgggaccggcctggccggcatgggggagccctgtctctactgaaaatacaaggttggctgggcgtggtggcgggtgcctgtgatcccagctgctcgggaggctggggcgggagagtctcttgagcccgggaggcggaggttgcggtgagctgagatggtgccattgcactccagcctgggcgacaagagtgaaactgtctc End editing Edited EST: AA600160, type: ag Aligns to: chr17:57281467-57281764 (+-) All mismatches: ag (5), ag (20), ag (24), ag (58), ag (129), tc (136), ag (151), ag (155), ag (158), ag (159), ag (185), ag (191), ag (194), ag (252), ag (260), ag (266), ag (274), Editing mismatches: 16, all mismatches: 17, alignment length: 297, cluster length: 270, total number of As: 69 Locations in RNA: 5 20 24 58 129 151 155 158 159 185 191 194 252 260 266 274 Locations in genome: 57281760 57281745 57281741 57281707 57281636 57281614 57281610 57281607 57281606 57281580 57281574 57281571 57281513 57281505 57281499 57281491 Upstream nucleotide (in genome): a c g g t c t a a a g c t c t c Upstream nucleotide summary: a: 4, c: 5, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): a g g g g g g t a c t t g g a c Downstream nucleotide summary: a: 3, c: 2, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 1, ca: 0, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 2, gt: 1, ta: 1, tc: 0, tg: 3, tt: 0, other: 0 >chr17:57281467-57281764 (+) tgctagggccgggcaccatggctcacgcctgtaatcccaggactttaggaggccaaggcaggtggatgacttgagctcaggagtttgagaccagcctgggcaacatgatgaaaactccgtctctaccaaaaatcaaaaaaattagccaggtgtgatgttgtgtgcctgtagtcccagctacttgtgaggctgaggtgggaggatggtttgggccccggaggtagaggttgcagtgagctgagattgtgccactgtattccatcctgggcaacagagccagaccctgcctcaaaaaaaa >AA600160:1-297 (-) tgctagggccgggcaccat-gctcgcgcctgtgatcccgggactttgggaggccaaggcaggtggatgacttgagctcaggagtttgagaccagcctgggcaacgtggtgaaagctccgtctctaccaaaaatcaaaaaggttggccgggtgtgatgttgtgcgcctgtggtcccagctacttgtgaggctgaggtgggaggatggtttgggccccggaggtagaggttgcagtgagctgggattgtgccactgtattccatcctgggcaacagggccggaccctgcctcaaagaaaa End editing Edited EST: AI360230, type: ag Aligns to: chr17:27657498-27657967 (+-) All mismatches: ag (1), ag (14), ag (15), ag (16), ag (22), ag (26), ag (30), ag (49), ag (50), ag (60), ag (70), ag (77), ag (84), ag (85), ag (93), ag (96), ag (99), ag (103), ag (116), ag (120), ag (125), ag (126), ag (148), ag (152), ag (156), ag (164), ag (180), ag (190), ag (211), ag (216), ag (221), ag (251), ag (256), ag (257), ag (275), ag (339), ag (341), ag (351), ag (357), ag (369), ag (370), ag (384), ag (388), ag (397), ag (409), ag (422), cg (423), ag (431), ag (448), Editing mismatches: 48, all mismatches: 49, alignment length: 470, cluster length: 448, total number of As: 112 Locations in RNA: 1 14 15 16 22 26 30 49 50 60 70 77 84 85 93 96 99 103 116 120 125 126 148 152 156 164 180 190 211 216 221 251 256 257 275 339 341 351 357 369 370 384 388 397 409 422 431 448 Locations in genome: 27657967 27657954 27657953 27657952 27657946 27657942 27657938 27657919 27657918 27657908 27657898 27657891 27657884 27657883 27657875 27657872 27657869 27657865 27657852 27657848 27657843 27657842 27657820 27657816 27657812 27657804 27657788 27657778 27657757 27657752 27657747 27657717 27657712 27657711 27657693 27657629 27657627 27657617 27657611 27657599 27657598 27657584 27657580 27657571 27657559 27657546 27657537 27657520 Upstream nucleotide (in genome): a a a g a c t a c g a g a g a g c g t c a t c t a a a a c g c c a t c c c c t a a c c c a c c t Upstream nucleotide summary: a: 17, c: 17, g: 7, t: 7, other: 0 Downstream nucleotide (in genome): n c a a g a g g a g g g c a t g g g c g t a g g a a c c g g c g t a c c c t c g a c c g c g t a Downstream nucleotide summary: a: 11, c: 13, g: 18, t: 5, other: 1 Dinucleotide summary: aa: 4, ac: 5, ag: 4, at: 3, ca: 2, cc: 6, cg: 7, ct: 2, ga: 2, gc: 0, gg: 5, gt: 0, ta: 3, tc: 2, tg: 2, tt: 0, other: 1 >chr17:27657498-27657967 (+) gcctagttttcatatttttagtaaagatggggtttcaccatgttggccaggctggtctcgaactcttgacctcaggtgatccacccaccttggcctcccaaagtgcttggattacaggcatgatccgccacacccgaccttaactatactgtttataacctgcgtggggttttaaaaagccattccaggctgggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggcgggtcacctgaggtcaggagttccagaccagcctcaacatggggaaaccccgtgtctactaaaaatacaaaattagccaggcgtggtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacctgggaggcggaagttgcagtgagccgagatcaagccattgcactccagcctaggcaacaagagcgaaactccatctcaaaa >AI360230:1-470 (-) gcctagttttcatatttttagtgaagatggggtttcaccgtgttggcggggctggtctcgagctcttgacctcgggtgatccgcccgccttggcctcccagggtgcttggattgcaggcgtgatccgccgcgcccgaccttaactatactgtttataacctgcgtggggttttaaaaagccattccaggctgggcgcggtggctcacgcctgtggtcccggcactttgggaggccgaggtgggcgggtcgcctggggtcgggagttccagaccagcctcagcatggggaagccccgtgtctactaagaatacaagattggccgggcgtggtggtgcatgcctgtggtcccggctgcttgggaggctggggcgggggagttgcttgggcctggggggcggaggttgcagtgggccgagatcgggccattgcactccagcctgggcgacaggagcggggctccatctcaaag End editing Edited EST: DB310259, type: ag Aligns to: chr18:29605093-29605627 (+-) All mismatches: ag (56), ag (58), ag (79), ag (85), ag (94), ag (107), ag (120), ag (150), ag (155), ag (158), ag (161), ag (279), Editing mismatches: 12, all mismatches: 12, alignment length: 535, cluster length: 224, total number of As: 59 Locations in RNA: 56 58 79 85 94 107 120 150 155 158 161 279 Locations in genome: 29605572 29605570 29605549 29605543 29605534 29605521 29605508 29605478 29605473 29605470 29605467 29605349 Upstream nucleotide (in genome): t a a c c c a a a t a c Upstream nucleotide summary: a: 6, c: 4, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g t c c g g t t g c a g Downstream nucleotide summary: a: 1, c: 3, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 3, ca: 0, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr18:29605093-29605627 (+) tcgaaaaacatttgggatagttaatttgtgagtactcatttatttagaagtcagtttggtactacagactatacaaactcatgtgtaaacatatatatacatgtagacacaacatatatcacatgcacacaccagtatccaaaagccagagagattaggaagtttaatgcaggagagcagaactttagacatgagaggatggaccctgcccatggcttctgtggctcagtgagaagacagaggacccccaatggccaggcgtggtggctcacgcctgtaatcccagcattttgggaggctgaggtggggggatcacctgaggtcaggagttcgagaccagcctgcccaacatggcgaaaccccgtttctctaaaaatacaagaaaattagccaggggtggtggcaggcacctgtaattccagcaactcaggaggctgaggcaggagaatcacttgaacccaggaggtggaggttgcaatagccgagatggcgccactgcactctagcctgggtgacaagagtgaaactctgtctc >DB310259:1-535 (-) tcgaaaaacatttgggatagttaatttgtgagtactcatttatttagaagtcagtttggtactacagactatacaaactcatgtgtaaacatatatatacatgtagacacaacatatatcacatgcacacaccagtatccaaaagccagagagattaggaagtttaatgcaggagagcagaactttagacatgagaggatggaccctgcccatggcttctgtggctcagtgagaagacagaggacccccaatggccgggcgtggtggctcacgcctgtaatcccagcattttgggaggctgaggtggggggatcacctgaggtcaggagttcgagaccagcctgcccaacatggcgaaaccccgtttctctaaagatgcaggaaagttagccaggggtggtggcaggcacctgtagttccagcaactcgggaggctgaggcgggagaatcgcttgagcccaggaggtggaggttgcagtggccgagatggcgccactgcactctagcctgggtgacaagagtgaaactctgtctc End editing Edited EST: DB343931, type: ag Aligns to: chr18:43694872-43695424 (+-) All mismatches: ag (18), ag (68), ag (79), ag (80), ag (81), ag (85), ag (91), ag (115), ag (120), ag (139), ag (143), ag (147), ag (150), ag (151), ag (153), ag (161), ag (162), ag (171), ag (184), ag (195), ag (246), tc (398), Editing mismatches: 21, all mismatches: 22, alignment length: 553, cluster length: 229, total number of As: 61 Locations in RNA: 18 68 79 80 81 85 91 115 120 139 143 147 150 151 153 161 162 171 184 195 246 Locations in genome: 43695407 43695357 43695346 43695345 43695344 43695340 43695334 43695310 43695305 43695286 43695282 43695278 43695275 43695274 43695272 43695264 43695263 43695254 43695241 43695230 43695179 Upstream nucleotide (in genome): c c a a t c g c a c c t a a a a t c a c c Upstream nucleotide summary: a: 8, c: 9, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g g c a a c g g t t g g t a a a a t t g c Downstream nucleotide summary: a: 6, c: 3, g: 7, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 0, at: 3, ca: 0, cc: 2, cg: 5, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chr18:43694872-43695424 (+) atttttagaggctttaaatgcttgggtttgttttctttctttcttctgattttcaccagtttcacagaagagcaggtcagcccaactcccacactattatgctggaagttgatctcctggtcaattgaattttgacaagggtgtaacaagacaattcaacggagaaaacaatagccttttcaacaaaagggacaactggatatccatatgctcaagaatgaagttggactcaaactcacacaaaatagaagaattctctcaaaatgaataaagcgcctaaaaaggccaggcacggtgtaatcccagcacttggggaggccgaggtgggtggatcacctgaggtcaggagtttgagaccagctttgccaaatggcgaaaccccatctctactaaaaatgcaaaaattagccaggcatggtggcatgtccctgtaatcccagctactagaggggctgaggcaggaggatcacttaaacctgggaggcagaggttgcagtgagccgagattgtgccactgcactccagcctgggaaacagagtgagactgcatctc >DB343931:1-553 (-) atttttagaggctttaaatgcttgggtttgttttctttctttcttctgattttcaccagtttcacagaagagcaggtcagcccaactcccacactattatgctggaagttgatctcctggtcaattgaattttgacaagggtgtaacaagacaatccaacggagaaaacaatagccttttcaacaaaagggacaactggatatccatatgctcaagaatgaagttggactcaaactcacacaaaatagaagaattctctcaaaatgaataaagcgcctaaaaaggccaggcacggtgtaatcccagcgcttggggaggccgaggtgggtggatcacctgaggtcaggagtttgagaccggctttgccaagtggcgaaaccccgtctctactggaaatgcagaggttggccgggcgtggtggcatgtccctgtagtcccggctactagaggggctgaggcagggggatcgcttgggcctgggaggcggaggttgcagtgagccgagattgtgccactgcactccagcctgggaaacggagtgagactgcatctc End editing Edited EST: DA124638, type: ag Aligns to: chr19:17596401-17596684 (+-) All mismatches: ag (127), ag (134), ag (135), ag (140), ag (144), ag (150), ag (161), ag (167), ag (173), ag (193), ag (198), ag (199), ag (202), ag (207), ag (208), ag (222), ag (223), ag (227), ag (233), ag (242), ag (247), ag (253), ag (280), Editing mismatches: 23, all mismatches: 23, alignment length: 284, cluster length: 154, total number of As: 42 Locations in RNA: 127 134 135 140 144 150 161 167 173 193 198 199 202 207 208 222 223 227 233 242 247 253 280 Locations in genome: 17596558 17596551 17596550 17596545 17596541 17596535 17596524 17596518 17596512 17596492 17596487 17596486 17596483 17596478 17596477 17596463 17596462 17596458 17596452 17596443 17596438 17596432 17596405 Upstream nucleotide (in genome): t a g c g g c t c t a a t a t a a g c c g g c Upstream nucleotide summary: a: 6, c: 6, g: 6, t: 5, other: 0 Downstream nucleotide (in genome): a t a g g g g a c g a a c a a c a t a g g g g Downstream nucleotide summary: a: 9, c: 3, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 0, at: 1, ca: 1, cc: 1, cg: 4, ct: 0, ga: 1, gc: 0, gg: 4, gt: 1, ta: 3, tc: 1, tg: 1, tt: 0, other: 0 >chr19:17596401-17596684 (+) ggccagggctggtggattacctgaggtcaggagtttgagaccagcctgaccaatatgatgaaaccccgtctctactaaaaatacaaaaattagtcgggtgtggtggtgggcacctgtaatcccagctactgtggaggctgaggcaggagaattgcttaaacccaggaggcggagggtgagccgagattgcaccactgtactctggcctgggcgacagagtgagactccgtctcaaaaaaaaaacaaaaaaacagttcattctcattcatctaacagcaagtggt >DA124638:1-284 (-) ggccggggctggtggattacctgaggtcaggggtttgggaccggcctgaccgatatggtgaggccccgtctctactggaaatgcaggaattggtcgggtgtggtggtgggcgcctgtgatcccggctactgtgggggctggggcgggagggttgcttgaacccaggaggcggagggtgagccgagattgcaccactgtactctggcctgggcgacagagtgagactccgtctcaaaaaaaaaacaaaaaaacagttcattctcattcatctaacagcaagtggt End editing Edited EST: DB342505, type: ag Aligns to: chr19:36253388-36253929 (+-) All mismatches: ag (43), ag (47), ag (48), ag (77), ag (117), ag (126), ag (154), ag (160), ag (163), ag (200), ag (221), ag (225), ag (246), ag (251), ag (252), ag (254), ag (279), ac (449), Editing mismatches: 17, all mismatches: 18, alignment length: 542, cluster length: 236, total number of As: 65 Locations in RNA: 43 47 48 77 117 126 154 160 163 200 221 225 246 251 252 254 279 Locations in genome: 36253887 36253883 36253882 36253853 36253813 36253804 36253777 36253771 36253768 36253731 36253710 36253706 36253685 36253680 36253679 36253677 36253652 Upstream nucleotide (in genome): t a c g a c t t t c c c c a t t a Upstream nucleotide summary: a: 4, c: 6, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): g g a a t c c a c g g g g t a t g Downstream nucleotide summary: a: 4, c: 3, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 2, ca: 1, cc: 1, cg: 4, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 2, tc: 2, tg: 1, tt: 1, other: 0 >chr19:36253388-36253929 (+) ctgcttgaggccaggagttcaagaccagcttgggtgacatggtgagattctgcctctactaaaaaaaaaaaaaaaaagagagagagagagagaaccaggtgtggtggtatgtacctgtaatcccagctacttgagagcctgaggctggaggatggcttgagcctaggagttcaaggctgctgtgagctatgatcatgccactgcactccagcctgggcagtagagcaagaccctgtctctatttaaaaaaaaaaaaaaaaaaaaagcctgggcaccgtggctcatgcctataatcccagcactttggtaggctgaggcaggcagatcacgaggtcaggagttcaggaccagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggtac-acacctgtaatcccagctactcaggagcctgaggcaggagaattgcttgaacccgggagacggaggttgcagtgagccaagatagcgccagcgcactccagcctggcgacagcaagactccatctc >DB342505:1-542 (-) ctgcttgaggccaggagttcaagaccagcttgggtgacatggtnanattctgcctctnctaaaaaaaaaaaaaaaaagagagagagagagagacccaggtgtggtggtatgtacctgtaatcccagctacttgagagcctgaggctggaggatggcttgagcctaggagttcaaggctgctgtgagctatgatcatgccactgcactccagcctgggcagtagagcaagaccctgtctctattt-aaaaaaaaaaaaaaaaaaaggcctgggcaccgtggctcatgcctgtggtcccggcactttggtaggctgaggcgggcggatcacgaggtcaggagttcgggaccagcctgaccaacatggtgaaaccccgtctctgctgaaaatgcaaaaattagccgggcgtggtggtactgcacctgtagtcccagctactcaggagcctgaggcaggagaattgcttggacccgggagacggaggttgcagtgagccgggatggcgccagcgcactccagcctggcgacagcaagactccatctc End editing Edited EST: DB343191, type: ag Aligns to: chr19:44634315-44634853 (+-) All mismatches: ag (30), ag (45), ag (75), ag (79), ag (114), ag (118), ag (124), ag (126), ag (150), ag (153), ag (154), ag (155), ag (160), ag (165), ag (175), ag (180), ag (186), ag (190), ag (191), ag (200), ag (214), ag (222), ag (257), ag (258), ag (264), ag (274), ag (320), ag (377), ag (400), ag (402), ag (409), ag (413), ag (445), ag (449), ag (453), ag (481), ag (484), ag (536), Editing mismatches: 38, all mismatches: 38, alignment length: 539, cluster length: 507, total number of As: 140 Locations in RNA: 30 45 75 79 114 118 124 126 150 153 154 155 160 165 175 180 186 190 191 200 214 222 257 258 264 274 320 377 400 402 409 413 445 449 453 481 484 536 Locations in genome: 44634824 44634809 44634779 44634775 44634740 44634736 44634730 44634728 44634704 44634701 44634700 44634699 44634694 44634689 44634679 44634674 44634668 44634664 44634663 44634654 44634640 44634632 44634597 44634596 44634590 44634580 44634534 44634477 44634454 44634452 44634445 44634441 44634409 44634405 44634401 44634373 44634370 44634318 Upstream nucleotide (in genome): c c c a t c t t t a a a t a c a c a t c c c a t c c c c g c c t t t a c t c Upstream nucleotide summary: a: 9, c: 17, g: 1, t: 11, other: 0 Downstream nucleotide (in genome): g c g c c g g t g t a a c g t a g c a t g c t a c g g g g g g c g g a a g a Downstream nucleotide summary: a: 8, c: 8, g: 17, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 2, ag: 1, at: 2, ca: 2, cc: 3, cg: 10, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 3, tg: 5, tt: 1, other: 0 >chr19:44634315-44634853 (+) gccaaaatgggagtatcacttgtggccaggagttcaagaccagccttggcaacatagcaagaccttgtctctacaaaaagtgtaaaaattagctagttatggtggtatgtgcctgtagtcctagctactcaggaggcagaggtgggaggatcacttgagcccaggaggtcaaggctgcagcgagccatgattgtgtccctgcactccagcctgggtgacagagggagacactctctttaaaaaaggaaaatacagggctgggcgcagtggcttacacctgtaatcccagcactttgggaggctgaggagggcggatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaacccatctgtactaagaatacaaaaaattagctgggcgtggtggcgggcgcctatagtcccagctactgaggaggctgaggcgggagaatggtgtgaacaacccaggaggtggagcttgcagtgagcggagatcacgccactgcactccagcctgggggacagagcgagactccatctc >DB343191:1-539 (-) gccgaaatgggagtatcacttgtggccaggagttcaagaccagccttggcaacatggcgagaccttgtctctacaaaaagtgtaaagattggctggttatggtggtatgtgcctgtagtcctagctgctcgggaggcgggggtgggaggatcacttgagcccgggaggtcaaggctgcagcgagccatgattgtgtccctgcactccagcctgggtgacggagggagacactctctttaaaaaaggaaaatacagggctgggcgcggtggcttacgcctgtggtcccagcactttgggaggctgaggagggcggatcgcgaggtcgggagatcgagaccgtcctggctggcacggtgaagacccgtctgtactaggaatgcaaagggttggctgggcgtggtggcgggcgcctgtggtcccggctgctgaggaggctgaggcgggagaatggtgtgaacagcccgggaggtggagcttgcagtgagcggagatcgcgccactgcactccggcctgggggacagagcgagactccatctc End editing Edited EST: DB348113, type: ag Aligns to: chr19:12304268-12304787 (+-) All mismatches: ag (1), ag (5), ag (12), ag (17), ag (85), ag (88), ag (108), ag (134), ag (137), ag (156), ag (161), ag (170), ag (173), ag (190), ag (243), ag (247), ag (261), ag (264), ag (278), ag (292), ag (297), ag (312), ag (313), ag (342), ag (357), ag (425), ag (443), ag (468), Editing mismatches: 28, all mismatches: 28, alignment length: 520, cluster length: 468, total number of As: 126 Locations in RNA: 1 5 12 17 85 88 108 134 137 156 161 170 173 190 243 247 261 264 278 292 297 312 313 342 357 425 443 468 Locations in genome: 12304787 12304783 12304776 12304771 12304703 12304700 12304680 12304654 12304651 12304632 12304627 12304618 12304615 12304598 12304545 12304541 12304527 12304524 12304510 12304496 12304491 12304476 12304475 12304446 12304431 12304363 12304345 12304320 Upstream nucleotide (in genome): a a c g a c c a t a c t a a c g c c c c t a a g c a t t Upstream nucleotide summary: a: 10, c: 10, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): n a t c t g g t t g g c a c g g g g t g g a a c c g g g Downstream nucleotide summary: a: 4, c: 5, g: 13, t: 5, other: 1 Dinucleotide summary: aa: 4, ac: 1, ag: 2, at: 2, ca: 0, cc: 1, cg: 7, ct: 2, ga: 0, gc: 2, gg: 1, gt: 0, ta: 0, tc: 1, tg: 3, tt: 1, other: 1 >chr19:12304268-12304787 (+) ccatcctggctaacacggtgaaacccgtctctactaaaaaatacaaaaaattagctgggcgtggtggcaggccctgtagtcccagctactcgggaagctgaggcaggagagtggtgtgaacccgggaggcggagcttgcagtgagccgagatggcgccactgcactccagcctgggcgacagagcgagattccgtctcaaacaagaaaaaaagaaaatgttctaggccaggtgccgtggctcatgcctgtaatcccagcagtttgggagactgaggcaggtggatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctccactagaaatacaaaaatcagccaagcacagtggcgcgcgcctataatcccagctactctggaggctgaggcagaagaatcgcttgaacaccagaatcggaggctgtagtgacccgagatcgcgccattgcattctgcactccagcctgggcaacagagtgagactccatctcaaaaaaa >DB348113:1-520 (-) ccatcctggctaacacggtgaaacccgtctctactaaaaaatacaaaaaattggctgggcgtggtggcaggccctgtggtcccagctactcgggaggctgaggcaggagagtggtgtgaacccgggaggcggagcttgcagtgagccgagatggcgccactgcgctccagcctgggcggcagagcgagattccgtctcaaacaagaaggaaagaaaatgttctgggccgggtgccgtggctcgtgcctgtaatcccggcggtttgggagactggggcgggtggatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaagccccgtctccactagagatgcaaaaatcggccaggcacagtggcgcgcgcctgtagtcccagctactctggaggctgaggcggaagaatcgcttgaacaccggagtcggaggctgtagtgacccgagatcgcgccattgcattctgcactccagcctgggcaacagagtgaggctccgtctcaagaaag End editing Edited EST: BU629423, type: ag Aligns to: chr19:53071346-53072002 (+-) All mismatches: ag (434), ag (448), ag (464), ag (468), ag (536), ag (543), ag (545), ag (575), ag (591), ag (594), ag (597), ag (601), ga (632), ag (646), Editing mismatches: 13, all mismatches: 14, alignment length: 657, cluster length: 213, total number of As: 53 Locations in RNA: 434 448 464 468 536 543 545 575 591 594 597 601 646 Locations in genome: 53071582 53071568 53071552 53071548 53071480 53071473 53071471 53071441 53071425 53071422 53071419 53071415 53071370 Upstream nucleotide (in genome): c t c a t a c c a t a c a Upstream nucleotide summary: a: 5, c: 5, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): c g g c g g a t a g t g t Downstream nucleotide summary: a: 2, c: 2, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 2, ca: 1, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 3, tt: 0, other: 0 >chr19:53071346-53072002 (+) caggcatgcaggctcaggcctgtaatcccagcactctgggaggctgaggcgggcggatcgcctgacgtcaggaattagaaaccagcctggccaacatggggaaaccccgtctctactgaaaatacaaagccattagccgggcatggtggcgcacgcctgtattttcagctatttgggaggctgaggcaggagaactgcttgaacccaggacgtggaggtcgtagtgagccgagatcacatcactgcattccagcctgggcgacagagcaggacgccttcccaaaacaaaacaaaacaaaacaaaatgtgctatacaatttagtttcctaatatcaattttaaaaagttttcgtgtaaataattaggaaaactaagcagccccagagataagacctcctggcatcattgtcccttcttatggagtgataatgtaaccttccttgaagtgtatcactccatcaccagtcaagctgccgcagcctatgcactggacttgaatggaaaatgtggtggttctgggaaagcttctctgtatttccttgtgtgtgtgaaatgttaatgtctctacttgggaacgctgaccccattcatttggagttgaggtttccaggtggctattctcatgctttgtgtccaaataaactctataattaataa >BU629423:14-670 (-) caggcatgcaggctcaggcctgtagtcccagcactctgagaggctgaggcgggcggatcgcctgacgtcgggagttggagaccagcctggccaacgtggggaaaccccgtctctactgaaaatacgaggccattggccgggcatggtggcgcacgcctgtattttcagctatttgggaggctgaggcaggagaactgcttgagcccgggacgtggaggtcgtggtgagccgagatcgcatcactgcattccagcctgggcgacagagcaggacgccttcccaaaacaaaacaaaacaaaacaaaatgtgctatacaatttagtttcctaatatcaattttaaaaagttttcgtgtaaataattaggaaaactaagcagccccagagataagacctcctggcatcattgtcccttcttatggagtgataatgtaaccttccttgaagtgtatcactccatcaccagtcaagctgccgcagcctatgcactggacttgaatggaaaatgtggtggttctgggaaagcttctctgtatttccttgtgtgtgtgaaatgttaatgtctctacttgggaacgctgaccccattcatttggagttgaggtttccaggtggctattctcatgctttgtgtccaaataaactctataattaataa End editing Edited EST: CA777008, type: ag Aligns to: chr19:12007855-12008387 (+-) All mismatches: ag (35), ag (72), ag (78), ag (89), ag (105), ag (109), ag (119), ag (277), ag (281), ag (292), ag (298), ag (305), ag (311), ag (314), ag (320), ag (324), ag (330), ag (337), ag (341), ag (346), ag (347), ag (369), ag (381), ag (383), ag (386), ag (387), ag (390), ag (404), ag (409), ag (424), ag (427), ag (435), ag (440), ag (479), ag (480), ag (498), Editing mismatches: 36, all mismatches: 36, alignment length: 533, cluster length: 464, total number of As: 143 Locations in RNA: 35 72 78 89 105 109 119 277 281 292 298 305 311 314 320 324 330 337 341 346 347 369 381 383 386 387 390 404 409 424 427 435 440 479 480 498 Locations in genome: 12008353 12008316 12008310 12008299 12008283 12008279 12008269 12008111 12008107 12008096 12008090 12008083 12008077 12008074 12008068 12008064 12008058 12008051 12008047 12008042 12008041 12008019 12008007 12008005 12008002 12008001 12007998 12007984 12007979 12007964 12007961 12007953 12007948 12007909 12007908 12007890 Upstream nucleotide (in genome): t a g a c t t c g a g a c a c g g t c a t c t a a t t a c g c c g a t c Upstream nucleotide summary: a: 10, c: 10, g: 7, t: 9, other: 0 Downstream nucleotide (in genome): c g g g g c g a g g g c c t g g g c g t a g c t a a c a t c a g g t a t Downstream nucleotide summary: a: 7, c: 8, g: 15, t: 6, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 3, at: 4, ca: 2, cc: 1, cg: 5, ct: 2, ga: 0, gc: 1, gg: 6, gt: 0, ta: 3, tc: 5, tg: 1, tt: 0, other: 0 >chr19:12007855-12008387 (+) agaaaattagttttaatagaaattagtggctgggcatggtggctcatgcctgtaatcccaatatttgggaggctgaggtgggtggatcacctgaggtcaggagttcaagaccagcctgatgaacatggaaaaaccttgtctctactaaaaatacaaaattagccaggcctggtggcacatgcctgtaatcccagctacctgggaggctgaggcaggagaatcacttgaacctgggaggccaaggtggcggtgagccaagatcacgccattgcactccagcctgggcaacaagagtgaaactccatctcaaaaaaataaaaataaaaataaaaataaagagattattccagcatcggcaacatggcaaactttgcctatacaaaaaattacctcgtcactgtgatgtgtgcctgtagtcccagctactcaggaggctgaggtagaaggatctgttgagcctaagagttcgaggctgcagtgagctatgattgcaccgctacactccagcctgggcaacagaatgagaccctgtt >CA777008:1-533 (-) agaaaattagttttaatagaaattagtggctgggcgtggtggctcatgcctgtggtcccaatatttgggaggctgaggtgggtggatcacctggggtcgggagttcgaggccagcctgatgaacgtggagaaaccttgtctctgctggaagtgcaaaattagccgggcctggtggcacatgcctgtggtcccggctgcctggggggctggggcgggagagtcgcttgagcctggggggccagggtggcggtgggccgagatcacgccattgcactccagcctgggcaacaagagtgaaactccatctcaaaaaaataaaaataaaaataaaaataaagagattattccagcatcggcaacatggcaaactttgcctatacaaaaaattacctcgtcactgtgatgtgtgcctgtggtcccagctgctcgggaggctgaggtagagggatctgttgggcctaggagttcgaggctgcagtgagctatgattgcaccgctgcactccagcctgggcaacagaatgagaccctgtt End editing Edited EST: CA848154, type: ag Aligns to: chr19:36446385-36446852 (+-) All mismatches: ag (102), ag (125), ag (127), ag (170), ag (179), ag (180), ag (198), ag (220), ct (225), ag (234), ag (235), ag (245), ag (273), ag (283), ag (308), ag (314), ag (316), ag (320), ag (349), ag (350), ag (372), ag (381), ag (396), ag (445), ag (455), ag (462), Editing mismatches: 25, all mismatches: 26, alignment length: 468, cluster length: 361, total number of As: 100 Locations in RNA: 102 125 127 170 179 180 198 220 234 235 245 273 283 308 314 316 320 349 350 372 381 396 445 455 462 Locations in genome: 36446751 36446728 36446726 36446683 36446674 36446673 36446655 36446633 36446619 36446618 36446608 36446580 36446570 36446545 36446539 36446537 36446533 36446504 36446503 36446481 36446472 36446457 36446408 36446398 36446391 Upstream nucleotide (in genome): c g c t a t c t a a c g c t t t c a a c c t c a t Upstream nucleotide summary: a: 6, c: 9, g: 2, t: 8, other: 0 Downstream nucleotide (in genome): c g g c t a t a c a a g g g t t c a a a g t g a c Downstream nucleotide summary: a: 8, c: 5, g: 7, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 0, at: 1, ca: 2, cc: 2, cg: 4, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 2, tg: 1, tt: 3, other: 0 >chr19:36446385-36446852 (+) tcagctacttggaaagctgaggcaggagaattgcttgaacccaggaggcggaggttgcagtcagccaggattatgccactgcactccagcctgggcaacagagcgagattccatctcaaaaaaaaaaggtcctggcgtggtggctcacacctatattcctagcactttgggaggccgaggtgggcagatcacctgaggtcaggagttcgagaccagcctgaccaatatggagaaaccccatctctactaaaaatacaaaattagccaggcatcgtgatgcatgcctgtaattccagctactcgggaggctgaggcaggagaatcgtttgaacccgggaggcagaggttggggtgagccgagattgcaccattgcacactccagcctggtcaacaagagcgaaactccgtctaaaaaaaaaaaaaaaaaaaaaaaggctttcctggaataaattactttcttgtctgtc >CA848154:1-468 (-) tcagctgcttggagagctgaggcgggagaattgcttgaacccaggaggcggaggttgcagtcagccaggattgtgccactgcactccggcctgggcgacagagcgagattccatctcaggaaaaaaaggtcctggcgtggtggctcacgcctgtgttcctggcactttgggaggccgaggtgggcggatcacctggggtcaggagttcgagaccagcctgaccgatatggagaggccccatctttactgaaaatacaaaattagccaggcgtcgtgatgcatgcctgtggttccagctgctcgggaggctgaggcaggagaatcgtttgaacccgggaggcgggggttggggtgagccgagattgcgccattgcacactccagcctggtcaacaagagcgaaactccgtctaaaaaaaaaaaaaaaaaaaaaaaggctttcctggaataaattactttcttgtctgtc End editing Edited EST: BG538716, type: ag Aligns to: chr19:16194570-16194894 (+-) All mismatches: ag (29), ag (32), ag (33), ag (81), ag (89), ag (115), ag (136), ag (253), ag (258), ag (284), ag (288), ag (291), Editing mismatches: 12, all mismatches: 12, alignment length: 326, cluster length: 262, total number of As: 53 Locations in RNA: 29 32 33 81 89 115 136 253 258 284 288 291 Locations in genome: 16194866 16194863 16194862 16194814 16194806 16194780 16194760 16194643 16194638 16194612 16194608 16194605 Upstream nucleotide (in genome): t a c t c c c c c c c t Upstream nucleotide summary: a: 1, c: 8, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g g a c g g g c g g c t Downstream nucleotide summary: a: 1, c: 3, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 1, cc: 2, cg: 5, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 1, other: 0 >chr19:16194570-16194894 (+) tttttttttttttttttgagacagggtcttactctatcacccaggctggaatgtagtggtgcgatcacagctcactgcagcctcgacctcctgggctcaagcgatcctcccgccacggcctccagagttccagagtaaagctgggactacaggcgcatgccatcatgcccagctaatttttttttgagacagagtctcgct-ctgtcgcccaggctggagtgcactggcgtgatctcagctcactacaagcttcacctcctgggttcacgacattctcctgcctcagcctcccaagtagctgggactacaggcacccgccaccaca >BG538716:1-326 (-) tttttttttttttttttgagacagggtcttactctgtcgcccgggctggaatgtagtggtgcgatcacggctcgctgcagcctcgacctcctgggctcaagcgatcctcccgccacggcctccagagttccagagtaaagctgggactacaggcgcatgccatcatgcccagctaatttttttttgagacggagtctcgctactgtcgcccgggctggagtgcactggcgtgatctcggctcactgcaagcttcacctcctgggttcacgacattctcctgcctcagcctcccgggtggctgggactacaggcacccgccaccaca End editing Edited EST: AW128958, type: ag Aligns to: chr19:12350871-12351270 (+-) All mismatches: ag (23), ag (48), ag (70), ag (131), ag (132), ag (165), ag (168), ag (189), ag (190), ag (196), ag (213), ag (221), Editing mismatches: 12, all mismatches: 12, alignment length: 400, cluster length: 199, total number of As: 58 Locations in RNA: 23 48 70 131 132 165 168 189 190 196 213 221 Locations in genome: 12351248 12351223 12351201 12351140 12351139 12351106 12351103 12351082 12351081 12351075 12351058 12351050 Upstream nucleotide (in genome): g t c a t a t a g c a a Upstream nucleotide summary: a: 5, c: 2, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g c g t a a c a a c g g Downstream nucleotide summary: a: 4, c: 3, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 2, at: 1, ca: 0, cc: 1, cg: 1, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 0, tt: 0, other: 0 >chr19:12350871-12351270 (+) atgttcatggattgtaagacttcctattgttaggatgagcatactacccaaattaatctacagatacaatgcaacccctatcaaaatccttatggccttctttttaggccgggcacaatggctcacacctgtaatcccagcactttgggaggctgaggcaggcagatcacttgaggtcaagagttcaagaccagcatggccaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggtgtggtggctcgtgcctgtaattccagctactcaggaggctgaggcaggagaattacttgaacccaggagatggagggtgcagtgcactgagattgtgccactacactccagcctgggagacagagtgagattctatctcaaaaaaaaaaa >AW128958:1-400 (-) atgttcatggattgtaagacttcctattgttaggatgagcatactacccaaattaatctacagatacaatgcaacccctatcaaaatccttatggccttctttttaggccgggcacaatggctcacacctgtaatcccagcactttgggaggctgaggcaggcagatcacttgaggtcaggagttcaggaccagcatggccaacgcggtgggaccccgtctctactaaaaatgcagaaaattagccgggtgtggtggctcgtgcctgtggttccagctactcaggaggctgaggcaggagaattacttgaacccaggagatggagggtgcggtgcactgagattgtgccactgcactccagcctgggagacagagtgggattctatctcaaaaaaaaaaa End editing Edited EST: AA205323, type: ag Aligns to: chr19:56890424-56890925 (+-) All mismatches: ag (144), ag (153), ag (192), ag (225), ag (239), ag (261), ag (289), ag (294), ag (295), ag (299), ag (321), ag (334), ga (411), Editing mismatches: 12, all mismatches: 13, alignment length: 505, cluster length: 191, total number of As: 59 Locations in RNA: 144 153 192 225 239 261 289 294 295 299 321 334 Locations in genome: 56890784 56890775 56890736 56890703 56890689 56890667 56890639 56890634 56890633 56890629 56890607 56890594 Upstream nucleotide (in genome): a c a t a t c a t c t a Upstream nucleotide summary: a: 5, c: 3, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g g c g a g g g a c g t Downstream nucleotide summary: a: 2, c: 2, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 1, ca: 0, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 3, tt: 0, other: 0 >chr19:56890424-56890925 (+) catgagtata-cttctgaaatgatctgtttcatcaatctatttgtc-ttctcagtagttccacattgtcttaattatagctttagaggaagtctt-gaaatttggtagtaagtcttccagttttgttattttaacaaatttctctaggctgggcatggtggctcatgcctataatcccagcactttaggagccccagacaggaggatcacttaagcgcagaagatcaagaccagcctgggaaatatagcaagaccttatctctacaaaaaaatttagaaattagctgggcatggtggcacccatctgtagtcctaactgctcaggaggctgaggtgggaggattgcttgagtccaggagttcaaggctgcagtgagttgtgatcacaccattgcagtccagccaggttgacagaatgagaccctgtctcttaaaaaaaaaaaaaaaaatcctggtgatgcttttctggattaaaaaataaaataaaataaaaattggcctcacta >AA205323:3-507 (-) catgagtataccttctgaaatgatctgtttcatcaatctatttgtctttctcagtagttccacattgtcttaattatagctttagaggaagtcttgaaaatttggtagtaagtcttccagttttgttattttaacaaatttctctaggctgggcatggtggctcatgcctatagtcccagcactttgggagccccagacaggaggatcgcttgggcgcggaagatcaagaccagcctgggaaatatggcaagaccttatctctacaaagaaatttagaaattggctgggcatggtggcacccatctgtagtcctagctgctcaggaggctgaggtgggaggattgcttgagtccgggagttcagggctgcagtgagttgtgatcacaccattgcagtccagncaggttgacagaatgagaccctgtctcttaaaaaaaaaaaaaaaaatcctggtgatgcttttctggattaaaaaataaaataaaataaaaattggcctcacta End editing Edited EST: AA652627, type: ag Aligns to: chr19:13884242-13884445 (+-) All mismatches: ag (27), ag (28), ag (38), ag (69), ag (78), ag (100), ag (121), ag (129), ag (132), ag (159), ag (169), ag (186), Editing mismatches: 12, all mismatches: 12, alignment length: 203, cluster length: 161, total number of As: 48 Locations in RNA: 27 28 38 69 78 100 121 129 132 159 169 186 Locations in genome: 13884419 13884418 13884408 13884377 13884368 13884346 13884325 13884317 13884313 13884286 13884276 13884259 Upstream nucleotide (in genome): a t c a c a t c a a t t Upstream nucleotide summary: a: 5, c: 3, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g a c g g g g c c t c g Downstream nucleotide summary: a: 1, c: 4, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 3, at: 1, ca: 0, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr19:13884242-13884445 (+) accagtttgggtaacataggaagagcttgtctctacaaacaaaaatttaaaaacaatgagctgggcatggaactcacacc-tctagccccagctactcaggctgaagtgggaggatggcttgagcccaggagttcaaggatgcagtgtgctttgattgcactactgcacttcaccctaagcaacagagtgagaccccatctcttt >AA652627:1-203 (-) accagtttgggtaacatgggaagagcttgtctctgcaaacaaaagtttaaaaacaatgagctgggcatggag-tcg-accctctggccccagctactcaggctgaggtgggaggatggcttgagcccgggagttcagggatgcagtgtgctttgattgcactactgcgcttcaccctgggcaacagagtgagaccccatctcttt End editing Edited EST: AA745406, type: ag Aligns to: chr19:50026878-50027133 (+-) All mismatches: ag (47), ag (75), ag (137), ag (173), ag (177), ag (183), ag (185), ag (212), ag (213), ag (219), ag (224), ag (239), ag (240), ag (249), Editing mismatches: 14, all mismatches: 14, alignment length: 256, cluster length: 203, total number of As: 69 Locations in RNA: 47 75 137 173 177 183 185 212 213 219 224 239 240 249 Locations in genome: 50027132 50027104 50027042 50027006 50027002 50026996 50026994 50026967 50026966 50026960 50026955 50026940 50026939 50026930 Upstream nucleotide (in genome): a c c t c t t a a t a a a a Upstream nucleotide summary: a: 7, c: 3, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t a g c g g t t a c a c a g Downstream nucleotide summary: a: 4, c: 3, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 2, ca: 1, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 1, tt: 1, other: 0 >chr19:50026878-50027133 (+) gaggcccaggcggatggatcatgaggtcaggagattgagaccatcctggctaagacggtgaaaccccgtctctactaaaaatacaaaaaattagccaagtgtggtggtgggcacctatagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccaggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggagacagagcaagattccatctcaaaaaaaaaaaaaaaat >AA745406:46-301 (-) gaggcccaggcggatggatcatgaggtcaggagattgagaccatcctggctaggacggtgaggccccgtctctactagaaatgcaaaaggttagccaagtgtggtggtgggcacctgtggtcccggctgctcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggagacagagcgagattccatctcaaaaaaaaaaaaaaagt End editing Edited EST: AI689020, type: ag Aligns to: chr19:17388748-17389006 (+-) All mismatches: ta (7), ag (94), ag (105), ag (114), ag (115), ag (133), ag (147), ag (149), ag (153), ag (169), ag (172), ag (173), ag (178), ag (183), ag (184), ag (202), ag (211), ag (212), ag (215), ag (261), Editing mismatches: 19, all mismatches: 20, alignment length: 259, cluster length: 168, total number of As: 49 Locations in RNA: 94 105 114 115 133 147 149 153 169 172 173 178 183 184 202 211 212 215 261 Locations in genome: 17388915 17388904 17388895 17388894 17388876 17388862 17388860 17388856 17388840 17388837 17388836 17388831 17388826 17388825 17388807 17388798 17388797 17388794 17388748 Upstream nucleotide (in genome): c a a g c t t t c a t a a a a a c g n Upstream nucleotide summary: a: 8, c: 4, g: 2, t: 4, other: 1 Downstream nucleotide (in genome): g c t a g a t c g c a a t a a c a c g Downstream nucleotide summary: a: 7, c: 5, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 0, at: 2, ca: 1, cc: 0, cg: 3, ct: 0, ga: 1, gc: 1, gg: 0, gt: 0, ta: 2, tc: 1, tg: 0, tt: 1, other: 1 >chr19:17388748-17389006 (+) agccgaggcgggtgactcacttgagttgggagttcggaccagcctgaccaacatggagaaaccctgtctctactaaaaatacaaaattaaccaggcgtggtggcacatacctataatcccatctactcaggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcggtgagccgagatcgtgccgttgcactccagcctgggaacaacagcgaaaccctgtctcaaaaaaaaaattaaaaaaataaaa >AI689020:3-261 (-) ggccgaggcgggtgactcacttgagttgggagttcggaccagcctggccggcatggagagaccctgtctctactaaaggtacagaattggccgggcgtggtggcacatgcctgtgatcccatctactcgggaggctgaggcaggagggtcgcttgagcccgggaggcggaggttgcggtgagccgagatcgtgccgttgcactccagcctgggaacaacagcgaaaccctgtctcaaaaaaaaaattaaaaaaaaaaaa End editing Edited EST: AI923318, type: ag Aligns to: chr19:46883184-46883579 (+-) All mismatches: ag (78), ag (83), ag (109), ag (123), ag (124), ag (153), ag (154), ag (156), ag (157), ag (159), ag (161), ag (162), Editing mismatches: 12, all mismatches: 12, alignment length: 396, cluster length: 85, total number of As: 29 Locations in RNA: 78 83 109 123 124 153 154 156 157 159 161 162 Locations in genome: 46883502 46883497 46883471 46883457 46883456 46883427 46883426 46883424 46883423 46883421 46883419 46883418 Upstream nucleotide (in genome): c g g a t a a a c t a a Upstream nucleotide summary: a: 6, c: 2, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): g a g t a t a a a c t a Downstream nucleotide summary: a: 6, c: 1, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 0, at: 3, ca: 1, cc: 0, cg: 1, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr19:46883184-46883579 (+) aaggctgctccaaagattacaatgtgtaactttaacttgtcctattctactttcaaataataatatgatacttaatggacaatataagaatcttatggcctggggcagtggctcatgcctgtaatcccagcagtttcggaggccgaggcaggtgaatcacttggggtcaggagttccagactagcctggtcaacatggcaaaaaccccatctctacaaccctgtctctactaaaaatacaaaaattagccaggcatggtggcacacacttctaatcccagctgctcgagaggctgaggcagaagaatcacttgaacccaggaggtggaggttgcagtgagccaaggtcgtgccactgcactccagcctgggcaacagagcgagactccatctcaaa >AI923318:1-396 (-) aaggctgctccaaagattacaatgtgtaactttaacttgtcctattctactttcaaataataatatgatacttaatggacaatataagaatcttatggcctggggcagtggctcatgcctgtaatcccagcagtttcggaggccgaggcaggtgaatcacttggggtcaggagttccagactagcctggtcaacatggcaaaaaccccatctctacaaccctgtctctactaaaggtgcggaggttagccaggcatggtggcacacacttctggtcccagctgctcgggaggctgaggcagaagaatcacttggacccgggaggtggaggttgcagtgagccaaggtcgtgccactgcactccagcctgggcaacagagcgagactccatctcaaa End editing Edited EST: AI962045, type: ag Aligns to: chr19:21328891-21329214 (+-) All mismatches: ag (52), ag (57), ag (77), ag (81), ag (82), ag (87), ag (93), ag (94), ag (95), ag (96), ag (109), ag (113), ag (117), ag (122), ag (123), ag (129), ag (131), ag (145), ag (149), ag (152), ag (153), ag (178), ag (188), ag (192), ag (198), ag (212), ag (217), Editing mismatches: 27, all mismatches: 27, alignment length: 324, cluster length: 166, total number of As: 53 Locations in RNA: 52 57 77 81 82 87 93 94 95 96 109 113 117 122 123 129 131 145 149 152 153 178 188 192 198 212 217 Locations in genome: 21329163 21329158 21329138 21329134 21329133 21329128 21329122 21329121 21329120 21329119 21329106 21329102 21329098 21329093 21329092 21329086 21329084 21329070 21329066 21329063 21329062 21329037 21329027 21329023 21329017 21329003 21328998 Upstream nucleotide (in genome): g g c a g c a a a c c t c a t c c c t a a a a g c c a Upstream nucleotide summary: a: 10, c: 10, g: 4, t: 3, other: 0 Downstream nucleotide (in genome): g g g c a c g a a a g c g t a c c g g t a c c t g g g Downstream nucleotide summary: a: 6, c: 7, g: 11, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 2, at: 2, ca: 1, cc: 3, cg: 6, ct: 0, ga: 1, gc: 0, gg: 2, gt: 1, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr19:21328891-21329214 (+) gaggtcccaatccaagccccaaaagagggttcttggattttgctcaagaaaaaattcagggtgagtccatacagtaaagtaaaaggaagtattaagaaaatatcacaaggtcaggagtttgagaccagcctgatcaacatggtgaaaccccgtctctactaaaaacataaaaattagccaggcttggtggtgcacacctgtaatcccagctactcaggagactgaggcaaaagaatcacttgaacccaggaggcagaggttgtagtgagccgagaccgtgccactgcactccagcctgggtgacagagtgacactctgtctgaa >AI962045:1-324 (-) gaggtcccaatccaagccccaaaagagggttcttggattttgctcaagaaaaaattcagggtgagtccatacagtaaagtaaaaggaagtattaagaaaatatcacagggtcgggagtttgagaccggcctggtcagcatggtgaagccccgtctctactaaaaacataaaggttggccgggcttggtggtgcgcgcctgtggtcccggctgctcgggagactgaggcgggggaatcgcttgggcccgggaggcagaggttgtagtgggccgggaccgtgccactgcactccagcctgggtgacagagtgacactctgtctgaa End editing Edited EST: DW431535, type: ag Aligns to: chr1:47809348-47809564 (+-) All mismatches: ag (62), ag (66), ag (98), ag (103), ag (123), ag (127), ag (142), ag (155), ag (159), ag (163), ag (168), ag (220), ag (222), ag (223), ag (245), ag (255), ag (259), Editing mismatches: 17, all mismatches: 17, alignment length: 216, cluster length: 198, total number of As: 50 Locations in RNA: 62 66 98 103 123 127 142 155 159 163 168 220 222 223 245 255 259 Locations in genome: 47809545 47809541 47809509 47809504 47809484 47809480 47809465 47809452 47809448 47809444 47809439 47809387 47809385 47809384 47809362 47809352 47809348 Upstream nucleotide (in genome): g c g g c a c c t c t g a c g c n Upstream nucleotide summary: a: 2, c: 7, g: 5, t: 2, other: 1 Downstream nucleotide (in genome): g g g g g c g g c g g c g a a g g Downstream nucleotide summary: a: 2, c: 3, g: 12, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 1, cc: 0, cg: 6, ct: 0, ga: 1, gc: 1, gg: 3, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 1 >chr1:47809348-47809564 (+) agccagggtgcaagaattacttgagccaaggagttcaagaccagcctgggaaacatcaaaagcccatccctgcatggtggcgggcgcctgtagtccagctactcaggaggctgaggcaggagcatggcgtgaacccaggaggcggagcttgcggtgagccgagatcgcgccactgcactccagcctggatgacagagagagactccgtctcaaaaaa >DW431535:44-259 (-) ggccggggtgcaaggattacttgagccaaggagttcggggccagcctgggaaacatcaaaagcccatccctgcatggtggcgggcgcctgtggtccggctgctcgggaggctgaggcgggagcatggcgtgagcccgggaggcggagcttgcggtgggccgggatcgcgccactgcactccagcctggatgacggagggagactccgtct-aaaaaa End editing Edited EST: BM083852, type: ag Aligns to: chr1:25107269-25107578 (+-) All mismatches: ag (10), ag (11), ag (12), ag (44), ag (56), ag (72), ag (80), ag (90), ag (91), ag (100), ag (121), ag (122), ag (130), ag (148), ct (150), ag (153), ag (156), ag (184), ag (186), ag (195), ag (198), ag (210), ga (225), Editing mismatches: 21, all mismatches: 23, alignment length: 310, cluster length: 201, total number of As: 61 Locations in RNA: 10 11 12 44 56 72 80 90 91 100 121 122 130 148 153 156 184 186 195 198 210 Locations in genome: 25107569 25107568 25107567 25107535 25107523 25107507 25107499 25107489 25107488 25107479 25107458 25107457 25107449 25107431 25107426 25107423 25107395 25107393 25107384 25107381 25107369 Upstream nucleotide (in genome): a a g c g a a a a t a t c t a t c a a a c Upstream nucleotide summary: a: 11, c: 4, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): c a a c g g c a a a t a t g a c t c c c a Downstream nucleotide summary: a: 8, c: 7, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 5, ag: 1, at: 1, ca: 1, cc: 1, cg: 0, ct: 2, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr1:25107269-25107578 (+) gagaagctgggatagaaactgaaaggacagctgggcacggtgtctcatgcctgtaatcccagtgctttgggaggcagaggcgggtggatcacctgaggtcaagagtttgagaacaacctgaccaacatggagaagccctgtctctactaaaaatacaaaactagctgggcacggtggcgcatgcctgtaatcccagctactcgggaggctaaggcaggaaaatcgcttgaacctgggaagtggaggttgtggtgagctgagatcgcaccattgcactccagcctcggcaacaagagtgaaactccatctc >BM083852:1-310 (-) gagaagctgggatagaaactgaaaggacagctgggcacggtgtctcatgcctgtaatcccagtgctttgggaggcagaggcgggtagatcacctgaggtcgagagtttgagagcagcctgaccagcgtggagaagccctgtctctactaaaaatgcagaattggctgggcacggtggcgcgtgcctgtggtcccagctactcgggaggctgaggcaggaggatcgcttgagcctgggaggtggaggttgtggtgggctgagatcgcgccattgcactccagcctcggcaacaagagtggggctccatctc End editing Edited EST: BM668498, type: ag Aligns to: chr1:204521110-204521418 (+-) All mismatches: ga (12), ag (20), ag (29), ag (59), ag (91), ag (98), ag (107), ag (113), ag (140), ag (166), ag (169), ag (173), ag (178), ag (179), ag (182), ag (197), ag (210), ag (260), ag (261), ag (269), ag (307), ag (308), ag (310), Editing mismatches: 22, all mismatches: 23, alignment length: 309, cluster length: 291, total number of As: 89 Locations in RNA: 20 29 59 91 98 107 113 140 166 169 173 178 179 182 197 210 260 261 269 307 308 310 Locations in genome: 204521400 204521391 204521361 204521329 204521322 204521313 204521307 204521280 204521254 204521251 204521247 204521242 204521241 204521238 204521223 204521210 204521160 204521159 204521151 204521113 204521112 204521110 Upstream nucleotide (in genome): c a c g a a c t t a a a a t a g a t c a a n Upstream nucleotide summary: a: 11, c: 4, g: 2, t: 4, other: 1 Downstream nucleotide (in genome): g a t g c t g g g t a t a a a c t a c a a a Downstream nucleotide summary: a: 9, c: 3, g: 5, t: 5, other: 0 Dinucleotide summary: aa: 6, ac: 1, ag: 0, at: 4, ca: 0, cc: 1, cg: 2, ct: 1, ga: 0, gc: 1, gg: 1, gt: 0, ta: 2, tc: 0, tg: 2, tt: 0, other: 1 >chr1:204521110-204521418 (+) aaaaaaaaaaaaaaaaaatcgtggaccgggcgtagtggctcacgcctgtaatcccaacactttgggagatcacctaggtcgggagtttgagaccagcctgaccgacatggagaaaccccatttttactaaaaatacaaaaaattagctgggcatggtggtgcatgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacctgagagggggagattgcggtgagctgagattgcgccattgcaccccagcctgggcaacaatagcgaaactgtctcagaaaaaagaaaaaaaaaa >BM668498:2-310 (-) gaggaaaaaaaaaaaaaatcgtggaccgggcgtagtggctcgcgcctgtggtcccaacactttgggagatcacctaggtcgggagtttgagaccagcctggccgacatggagagaccccatttttactgaaggtacagaaagttggctgggcatggtggtgcatgcctgtggtcccagctactcaggaggctgaggcgggagagtcgcttgagcctgagggggggagattgcggtgagctgagattgcgccgttgcaccccagcctgggcaacaatagcgagactgtctcggaaaaaaaaaaaaaaaaa End editing Edited EST: BQ778247, type: ag Aligns to: chr1:247516849-247517308 (+-) All mismatches: ag (50), ag (65), ag (90), ag (103), ag (109), ag (135), ag (145), ag (158), ag (162), ag (180), ag (192), ag (199), ag (201), ag (225), ag (235), ag (244), Editing mismatches: 16, all mismatches: 16, alignment length: 460, cluster length: 195, total number of As: 57 Locations in RNA: 50 65 90 103 109 135 145 158 162 180 192 199 201 225 235 244 Locations in genome: 247517259 247517244 247517219 247517206 247517200 247517174 247517164 247517151 247517147 247517129 247517117 247517110 247517108 247517084 247517074 247517065 Upstream nucleotide (in genome): c a c a c a a c t t a c a c c c Upstream nucleotide summary: a: 6, c: 8, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): c g g t g t g g g c a t c g c g Downstream nucleotide summary: a: 1, c: 4, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 2, ca: 0, cc: 2, cg: 5, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr1:247516849-247517308 (+) tcaaggcctgataaatctaagcactggcagccagtctgtaaatgtaacaaaccacatggctcatgcacccagaaggtcacaataagcaaacagaatgtagagaaggggtcagtccataaaagggaagaaagtttcgttatagggaaatcaaaacttaagtgggagctgggcgcagtggctcacacctgtaatcccagcatctcggaaggctgaggcaggtggatcacctgaggtcaggagttcgagactagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggtgtagtggcaagcgcctgcaatcccagctactcaggaggctgaggcaggagaattgcttgaacccaggaggcagaggttacagtttgccaagattgtgccattgcactccagccggggtgacagagtgagattctgtctcaaaagaaaaagaaaa >BQ778247:1-460 (-) tcaaggcctgataaatctaagcactggcagccagtctgtaaatgtaacaaaccacatggctcatgcacccagaaggtcacaataagcaaacagaatgtagagaaggggtcagtccataaaagggaagaaagtttcgttatagggaaatcaaaacttaagtgggagctgggcgcagtggctcacacctgtaatcccagcatctcggaaggctgaggcgggtggatcgcctgaggtcgggagttcgagactagcctggccagcgtggtgagaccccatctctgctaaaaatacaaaaattggccgggtgtagtggcaggcgcctgcagtcccagctactcaggaggctgaggcgggagagttgcttgaacccgggaggcagaggttacagtttgccaggattgtgccattgcgctccagccggggtgacagagtgagattctgtctcaaaagaaaaagaaaa End editing Edited EST: AA610747, type: ag Aligns to: chr1:36265475-36265885 (+-) All mismatches: ag (89), ag (90), ag (117), ag (125), ag (130), ag (131), ag (149), ag (153), ag (157), ag (160), ag (164), ag (171), ag (172), ag (173), ag (187), ag (188), ag (189), ag (197), ag (198), ag (212), ag (213), ag (221), ag (234), ag (252), ag (261), tc (263), ag (266), ag (267), Editing mismatches: 27, all mismatches: 28, alignment length: 411, cluster length: 179, total number of As: 54 Locations in RNA: 89 90 117 125 130 131 149 153 157 160 164 171 172 173 187 188 189 197 198 212 213 221 234 252 261 266 267 Locations in genome: 36265797 36265796 36265769 36265761 36265756 36265755 36265737 36265733 36265729 36265726 36265722 36265715 36265714 36265713 36265699 36265698 36265697 36265689 36265688 36265674 36265673 36265665 36265652 36265634 36265625 36265620 36265619 Upstream nucleotide (in genome): a g c c a t c t t a a a a t a a g a c a c c g g t a t Upstream nucleotide summary: a: 11, c: 6, g: 4, t: 6, other: 0 Downstream nucleotide (in genome): c a g g t a t g g t a a a a c a a c a g a g t g g t a Downstream nucleotide summary: a: 11, c: 3, g: 8, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 3, ag: 1, at: 3, ca: 2, cc: 0, cg: 3, ct: 1, ga: 2, gc: 0, gg: 1, gt: 1, ta: 3, tc: 0, tg: 3, tt: 0, other: 0 >chr1:36265475-36265885 (+) aataaatggaaagatatcctgtgttcatgaattgcaatacttaatattgttaagatggcaatactccccaaattgacttacagattcaatgtaattcatatcaaaattccaacaaaaaggctgggctcagtggctcatgcctgtaatcttagcactttgagaggtcgaggcgggtggatcatctgaggtcaggagttcaagaccagcctggccaacatggtgaaacaccgtctctactaaaaatacaaaaaattagctaggcatggtggcacgtgcctgtaatcccagctactcaggaggctgaggcatgagaatcacttgaacccgggagatggaggttgcagtgagctgagatcgtgagatggcgccactgcactccaggctgggccacagagtgagactgtcgcaaaa >AA610747:1-411 (-) aataaatggaaagatatcctgtgttcatgaattgcaatacttaatattgttaagatggcaatactccccaaattgacttacagattcaatgtaattcatatcaaaattccaacaaaaaggctgggctcagtggctcatgcctgtggtcctggcactttgggaggtcgaggcgggtgggtcatctgaggtcgggagttcgggaccagcctggccggcatggtggggcaccgtctctactgggaatacagaaagttggctgggcgtggtggcacgtgcctgtggtcccggctactcgggaggctgaggcatgagaatcacttgggcccgggagatggaggttgcagtgagctgagatcgtgagatggcgccactgcactccaggctgggccacagagtgagactgtcgcaaaa End editing Edited EST: AA665017, type: ag Aligns to: chr1:15724453-15724780 (+-) All mismatches: ag (199), ag (204), ag (205), ag (213), ag (222), ag (229), ag (233), ag (239), ag (242), ag (269), ag (275), ag (300), ag (312), ag (313), ag (318), Editing mismatches: 15, all mismatches: 15, alignment length: 327, cluster length: 121, total number of As: 39 Locations in RNA: 199 204 205 213 222 229 233 239 242 269 275 300 312 313 318 Locations in genome: 15724582 15724577 15724576 15724568 15724559 15724552 15724548 15724542 15724539 15724512 15724506 15724480 15724468 15724467 15724462 Upstream nucleotide (in genome): c a c c c t a c a c t t a a t Upstream nucleotide summary: a: 5, c: 6, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): c g a g g g c c t g g g a a c Downstream nucleotide summary: a: 3, c: 4, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 1, ca: 1, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr1:15724453-15724780 (+) cctgtctctactaaaaatacaaaaattagccaggtgtggtggcacatgcctgtagtcccagctacacaggaggctgaggtgggagaatcacttgaacctaggaggcagaggttgcagtgagccaagaccacgccattgcacgccagcctaacagagtgagactctgtctttaaaaaaaaaaaaaaatggctgggcctgtaatcccagctactcgggaggctgagacaggagaatcacttcaacccgggaggtgatgattgcagggagccaagatcacacaactgcactctagcctgagtgacagagcaagactccatctcaaaaaaaa >AA665017:1-327 (-) cctgtctctgctaaggatacaaaaattggccaggtgtggt-gcacatgcctgtggtcccggctacacaggaggctgaggtgggagagtcgcttgagcctgggaggcggaggttgcggtgagccgggaccgcgccattgcacgccagcctaacagagtgagactctgtctttaaaaaaaaaaaaaaatggctgggcctgtaatcccagctactcgggaggctgagacaggagaatcacttcaacccgggaggtgatgattgcagggagccaagatcacacaactgcactctagcctgagtgacagagcaagactccatctcaaaaaaaa End editing Edited EST: AI978999, type: ag Aligns to: chr1:226327007-226327528 (+-) All mismatches: ag (20), ag (23), tc (46), ag (53), ag (57), ag (81), ag (82), ag (93), ag (122), ag (123), ag (149), ag (152), ag (154), ag (157), ag (163), ag (177), ag (184), ag (186), ag (187), ag (196), ag (215), ag (220), ag (255), ag (264), Editing mismatches: 23, all mismatches: 24, alignment length: 522, cluster length: 245, total number of As: 60 Locations in RNA: 20 23 53 57 81 82 93 122 123 149 152 154 157 163 177 184 186 187 196 215 220 255 264 Locations in genome: 226327509 226327506 226327476 226327472 226327448 226327447 226327436 226327407 226327406 226327380 226327377 226327375 226327372 226327366 226327352 226327345 226327343 226327342 226327333 226327314 226327309 226327274 226327265 Upstream nucleotide (in genome): c c c g a g g a t t a a t t a c a c c g c a c Upstream nucleotide summary: a: 7, c: 8, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): g a g g c a g t a g t a c a c t c a g g c t c Downstream nucleotide summary: a: 6, c: 6, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 0, at: 3, ca: 2, cc: 2, cg: 3, ct: 1, ga: 1, gc: 0, gg: 3, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr1:226327007-226327528 (+) atgacagcagactacacattctactcaagtgaacatggaacatcca-ctaaaagacaccattctgggacataaaacaagccttggtaaataaaaaaaaaaatgaaataatgaaattaaattagaaatcaacaacagaaaaagacttgggaaatcctcaaatacatggagcctaatacacttctaaataacccatgtaacaaggaagaaatcacaaaggaaattagaaaatattttaaactgggccgggctcggtggctcacgcctgtaatcctggcactttgggaggtctaggtgggtggatcacctgaggtcaggagttggagaccagcctggccaacatgtgaaaccctgtctctactaaaaatacaaaattagctgggcatggtggcatgtgcctgtaatcccagctactcgggaggctgaggtaggagaatcgcttgaacttgggaggcggaggttgcagtgagccaggattatgccactgcactccagcctgagcaacagagtgagactccgtctcaa >AI978999:1-522 (-) atgacagcagactacacattctactcaagtgaacatggaacat-cacctaaaagacaccattctgggacataaaacaagccttggtaaataaaaaaaaaaatgaaataatgaaattaaattagaaatcaacaacagaaaaagacttgggaaatcctcaaatacatggagcctaatacacttctaaataacccatgtaacaaggaagaaatcacaaaggaaattagaaaatattttaaactgggccgggctcggtggctcgcgcctgtagtcctggcactttgggaggtctaggtgggtggatcgcctggggtcaggagttggagaccggcctggccggcgtgtgaagccctgtctctactgaaaatgcagagttggctgggcatggtggcatgtgcctgtggtcccagctactcgggaggctgaggtaggggaatcgcttgggcttgggaggcggaggttgcagtgggccgggattacgccactgcactccagcctgagcgacggagtgagactccgtctcaa End editing Edited EST: BM687439, type: ag Aligns to: chr20:33490716-33491161 (+-) All mismatches: ga (18), ag (84), ag (90), ag (102), ag (113), ag (114), ag (122), ag (125), ag (128), ag (145), ag (173), ag (181), ag (210), ag (220), ag (230), ag (244), ag (254), ag (258), ag (259), ag (263), ag (267), ag (289), ag (367), ag (369), ag (380), ag (383), ag (396), ag (404), ag (405), ag (421), ag (463), Editing mismatches: 30, all mismatches: 31, alignment length: 446, cluster length: 380, total number of As: 99 Locations in RNA: 84 90 102 113 114 122 125 128 145 173 181 210 220 230 244 254 258 259 263 267 289 367 369 380 383 396 404 405 421 463 Locations in genome: 33491095 33491089 33491077 33491066 33491065 33491057 33491054 33491051 33491034 33491006 33490998 33490969 33490959 33490949 33490935 33490925 33490921 33490920 33490916 33490912 33490890 33490812 33490810 33490799 33490796 33490783 33490775 33490774 33490758 33490716 Upstream nucleotide (in genome): a t c a g a g c t c t a a c c c a c c a t c t a c c a c a n Upstream nucleotide summary: a: 10, c: 12, g: 2, t: 5, other: 1 Downstream nucleotide (in genome): g a g c a t g g c t g c c g g c a a g g a g c t a c t a c g Downstream nucleotide summary: a: 7, c: 8, g: 11, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 4, ag: 2, at: 3, ca: 3, cc: 2, cg: 6, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 2, tg: 1, tt: 0, other: 1 >chr20:33490716-33491161 (+) agtagagagagcatttcgctatgttgcccagtctggtctcgaactcttgggctcaagcaatcctcccaccttggcttcccaaaatgctgggattacaggcatgagccaccatgcctggccaatttatgtttttaatagatcattctgtggccgggtgcagtggctcatgcttgtaatcccagcactttgggagccaaggcaggcaaatcacttgaggtcaggagttcgagaccagactggctaacatggtaaaacttcatctctactaaaaatacaaaaattagccaggcatggtggcatgcacctgtggtcccagctacttgggaggctgaggcaggagaatcatttgaacccggcaggcagaggttgcagtaagtcaagatcacaccactgcattccagcctgggtgacagactgagactctctcaaaaaaaaaaaaaaaaaag >BM687439:18-463 (-) ggtagagagagcatttcgctatgttgcccagtctggtctcgagctcttgggctcaagcggtcctcccgccttggcttcccgaagtgctgggattgcgggcatgagccaccatgcctggccaatttatgtttttaatagatcattctgtggccgggtgcagtggctcatgcttgtgatcccagcactttgggagccagggcgggcggatcgcttgaggtcgggagttcgagaccggactggctagcatggtaaagcttcatctctactaaaaatacaaaaattggccaggcgtggtggcatgcacctgtggtcccagctgcttgggaggctgaggcgggggagtcatttgggcccggcaggcggaggttgcagtgagtcaggatcacaccactgcattccagcctgggtgacagactgagactctctcaaaaaaaaaaaaaaaaaaa End editing Edited EST: CN414155, type: ag Aligns to: chr21:44555380-44555746 (+-) All mismatches: ga (1), ag (48), ag (53), ag (63), ag (96), ag (106), ag (112), ag (115), ag (119), ag (128), ag (129), ag (169), ag (170), ag (190), ct (201), ag (209), ag (263), ag (264), ag (266), ag (287), ag (291), ag (299), Editing mismatches: 20, all mismatches: 22, alignment length: 367, cluster length: 252, total number of As: 73 Locations in RNA: 48 53 63 96 106 112 115 119 128 129 169 170 190 209 263 264 266 287 291 299 Locations in genome: 44555699 44555694 44555684 44555651 44555641 44555635 44555632 44555628 44555619 44555618 44555578 44555577 44555557 44555538 44555484 44555483 44555481 44555460 44555456 44555448 Upstream nucleotide (in genome): c c g a g g c c a t a t c g a t t c c a Upstream nucleotide summary: a: 5, c: 7, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): c c g t g g g c t a a a g g t a t g g g Downstream nucleotide summary: a: 4, c: 3, g: 9, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 3, ca: 0, cc: 3, cg: 4, ct: 0, ga: 0, gc: 0, gg: 4, gt: 0, ta: 3, tc: 0, tg: 0, tt: 1, other: 0 >chr21:44555380-44555746 (+) ttaaaggagaagaaaatgattatgtgtacatgctggtggcacacataacttagtattaagtattacaaagtcttacaggcagggcacagtggctcacgcctataatcccagtattttgggaggctgaggtgggcagatcacctgaggtcagcaatttgagaccagtctggccaacacagtgaaaccccatctctactaaaaatacaaaaattagccaggtatggtggcacacacctgtaattccagccactcaggaggctgaggcaggagaatcatttgaacccgggaggctgaggttgcagtgagctgagatcacaccactgcactccagcctgagtgacggagtgagactctgtttcaaaaaaag >CN414155:1-367 (-) ttaaaggagaagaaaatgattatgtgtacatgctggtggcacacataacttagtattaagtattacaaggtcttacgggcggggcacagtggctcacgcctgtggtcccagtattttgggaggctgaggtgggcagatcacctgaggtcagcaatttgggaccagtttggccaacacggtgaaaccccatctctactggaaatacaaaaattagccaggtatggtggcacacacctgtggttccagccgctcggggggctggggcaggagagtcatttgaacccgggaggctgaggttgcagtgggctgagatcgcaccgctgcactccagcctgagtgacggagtgagactctgtttcaaaaaaaa End editing Edited EST: DB347561, type: ag Aligns to: chr22:31650428-31650949 (+-) All mismatches: ag (1), ag (9), ag (14), ag (15), ag (16), ag (17), ag (35), ag (40), ag (45), ag (60), ag (64), ag (73), ag (76), ag (84), ag (85), ag (90), ag (93), ag (94), ag (95), ag (96), ag (112), ag (116), ag (120), ag (125), ag (126), ag (129), ag (136), ag (152), ag (156), ag (161), ag (164), ag (165), ag (181), ag (182), ag (189), ag (192), ag (195), ag (201), ag (204), ag (225), ag (230), ag (238), ag (239), ag (252), ag (260), ag (261), ag (277), ag (279), ag (283), Editing mismatches: 49, all mismatches: 49, alignment length: 522, cluster length: 283, total number of As: 80 Locations in RNA: 1 9 14 15 16 17 35 40 45 60 64 73 76 84 85 90 93 94 95 96 112 116 120 125 126 129 136 152 156 161 164 165 181 182 189 192 195 201 204 225 230 238 239 252 260 261 277 279 283 Locations in genome: 31650949 31650941 31650936 31650935 31650934 31650933 31650915 31650910 31650905 31650890 31650886 31650877 31650874 31650866 31650865 31650860 31650857 31650856 31650855 31650854 31650838 31650834 31650830 31650825 31650824 31650821 31650814 31650798 31650794 31650789 31650786 31650785 31650769 31650768 31650761 31650758 31650755 31650749 31650746 31650725 31650720 31650712 31650711 31650698 31650690 31650689 31650673 31650671 31650667 Upstream nucleotide (in genome): a c a a a c c c c g c c a a g c a a a g c t c a t c c t a t a a a a c c c c g c c a c c a t t c c Upstream nucleotide summary: a: 17, c: 22, g: 4, t: 6, other: 0 Downstream nucleotide (in genome): n t t a a a g c c g g g g c a c t a a a g c g t a g t g a g a a c a t a c g c c g g a c t a g t g Downstream nucleotide summary: a: 15, c: 10, g: 15, t: 8, other: 1 Dinucleotide summary: aa: 8, ac: 2, ag: 2, at: 4, ca: 3, cc: 6, cg: 9, ct: 4, ga: 2, gc: 1, gg: 1, gt: 0, ta: 2, tc: 1, tg: 3, tt: 0, other: 1 >chr22:31650428-31650949 (+) aatatttgttaaggctttgctcttccaggtcctttgcttggtgctgagtctaccaagagtaagtgggatgctgtttttgtcctcagggagctaacagtctagtgaagaagaaagatggttgcccaggaacttctaagtcagaaggcaggaggcaagaaggaagcccctgctcctactgccagccctctgttgggcaccccatagttcttcagaaccacatttaatcctcactgcaggccaggcatagtggctcacacctgtaatcgcagcacttcgggaggccaaggcgggcagatcacttgaggtcgggagttcgagaccagcctcaccaacatggggaaaccccgtctctactaaaaatagaaaaattagccgggtgtggtggcatgcgccagtaatcccagctactcaggaggctgaggtgggaaaatcacttgaactcgggaagcagaggttgcagtgagccgagattgtgccactgcactccagcctgggcgataagagcaaaattccatctcaaaa >DB347561:1-522 (-) aatatttgttaaggctttgctcttccaggtcctttgcttggtgctgagtctaccaagagtaagtgggatgctgtttttgtcctcagggagctaacagtctagtgaagaagaaagatggttgcccaggaacttctaagtcagaaggcaggaggcaagaaggaagcccctgctcctactgccagccctctgttgggcaccccatagttcttcagaaccacatttaatcctcactgcaggccgggcgtggtggctcacacctgtggtcgcagcgcttcgggaggccggggcgggcggatcgcttgaggtcgggagttcgaggccggcctcgccgacgtggggaggccccgtctctactaaggatggaaagattggccgggtgtggtggcgtgcgccggtggtcccggctgctcgggaggctgaggtgggggggtcgcttgggctcgggaggcggaggttgcggtgggccgagattgtgccgctgcgctccggcctgggcgataagagcggggttccgtctcaaag End editing Edited EST: DW432067, type: ag Aligns to: chr22:35675127-35675363 (+-) All mismatches: ag (12), ag (49), ag (52), ag (58), ag (92), ag (114), ag (127), ag (128), ag (131), ag (132), ag (153), ag (169), ag (170), ag (172), ag (177), ag (189), ac (215), Editing mismatches: 16, all mismatches: 17, alignment length: 237, cluster length: 178, total number of As: 37 Locations in RNA: 12 49 52 58 92 114 127 128 131 132 153 169 170 172 177 189 Locations in genome: 35675361 35675324 35675321 35675315 35675281 35675259 35675246 35675245 35675242 35675241 35675220 35675204 35675203 35675201 35675196 35675184 Upstream nucleotide (in genome): g t t t t c a c a c a a c c a a Upstream nucleotide summary: a: 6, c: 5, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): c g g t c g t a g a c t a c t g Downstream nucleotide summary: a: 3, c: 4, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 3, ca: 3, cc: 1, cg: 1, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 1, other: 0 >chr22:35675127-35675363 (+) ttttttttttttttttttttttttttttttgagacggagtttcactcttgttgtctaagctggagtgcaatggcacaatctcggctcaccgcaacctctgtctcctgggttttcaagcaattctcctgcctcagcctcccgagtagctgcaattacaggcatgtgccaccacacccggctaattttgtatttttagtagagacagggtttctccatgttggtctcgaactcccgacc >DW432067:10-246 (-) ttttttttttttttttttttttttttttttgcgacggagtttcactcttgttgtctaggctggagtgcagtggcgcggtctcggctcaccgcagcctctgtctcctgggttttcgggcggttctcctgcctcggcctcccgagtagctgcaattgcaggcatgtgccaccacacccggctaattttgtgtttttggtggagacagggtttctccatgttggtctcgaactcccggcc End editing Edited EST: AA827538, type: ag Aligns to: chr22:36662500-36662952 (+-) All mismatches: ag (18), ag (32), ag (42), ag (52), ag (61), ag (81), ag (82), ag (90), ag (91), ag (96), ag (113), ag (123), ag (149), ag (155), ag (156), ag (159), ag (163), ag (164), ag (165), ag (179), ag (181), ag (185), ag (189), ag (199), ag (210), ag (213), ag (218), ag (234), ag (256), ag (257), Editing mismatches: 30, all mismatches: 30, alignment length: 453, cluster length: 240, total number of As: 62 Locations in RNA: 18 32 42 52 61 81 82 90 91 96 113 123 149 155 156 159 163 164 165 179 181 185 189 199 210 213 218 234 256 257 Locations in genome: 36662935 36662921 36662911 36662901 36662892 36662872 36662871 36662863 36662862 36662857 36662840 36662830 36662804 36662798 36662797 36662794 36662790 36662789 36662788 36662774 36662772 36662768 36662764 36662754 36662743 36662740 36662735 36662719 36662697 36662696 Upstream nucleotide (in genome): g c c g c a g a g c t t t a a t a a t a g c a c g c g a a t Upstream nucleotide summary: a: 10, c: 7, g: 7, t: 6, other: 0 Downstream nucleotide (in genome): g g c g g c a t a g a g g a a c a a a c a g c t g g g g t a Downstream nucleotide summary: a: 10, c: 5, g: 12, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 3, ag: 1, at: 2, ca: 0, cc: 1, cg: 5, ct: 1, ga: 3, gc: 0, gg: 4, gt: 0, ta: 3, tc: 1, tg: 2, tt: 0, other: 0 >chr22:36662500-36662952 (+) ggactttggcatttccatagctgagcacagcaggggaggggttaatgcagatggcagtgcagcaaggagaaggcaggaacattggagcctgcaataagggaaaaatgggaactggagagtgtggggaatgggaagaagcagtttactttagactaaagaatatattggggggccgggtgtagtggctcatgcctgtaatccgagcactttgggaggccaaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccgtctctactaaaaatacaaaaaattagccgggcatggtggcgggcgcctgtagttccagctaactgggcggctgaggcaggagaatggcgtgaacctgggaggtggagcttgcagtgagccgagatatcgccactgcactccagcctgggtgacagagcgagactccatctcaa >AA827538:1-453 (-) ggactttggcatttccatagctgagcacagcaggggaggggttaatgcagatggcagtgcagcaaggagaaggcaggaacattggagcctgcaataagggaaaaatgggaactggagagtgtggggaatgggaagaagcagtttactttagactaaagaatatattggggggccgggtgtagtggctcatgcctgtggtccgagcactttgggaggccagggcgggcggatcacggggtcgggggatcgagaccgtcctggctagcacggtggagccccgtctctactgggaatgcaggaaattggccgggcatggtggcgggcgcctgtggttccagctgactgggcggctgaggcgggagggtggcgtgggcctgggaggtggagcttgcggtgagccgggatatcgccgctgcactccggcctgggtgacagggcgagactccatctcaa End editing Edited EST: CV406833, type: ag Aligns to: chr2:75893973-75894393 (+-) All mismatches: at (17), ag (30), ag (33), ag (57), ag (64), ag (100), ag (122), ag (134), ag (140), ag (143), ag (151), ag (158), ag (166), ag (181), ag (182), ag (205), ag (241), ag (242), ag (252), ag (259), ag (299), ag (320), ag (350), Editing mismatches: 22, all mismatches: 23, alignment length: 422, cluster length: 320, total number of As: 78 Locations in RNA: 30 33 57 64 100 122 134 140 143 151 158 166 181 182 205 241 242 252 259 299 320 350 Locations in genome: 75894365 75894362 75894338 75894331 75894295 75894273 75894261 75894255 75894252 75894244 75894237 75894229 75894215 75894214 75894191 75894155 75894154 75894144 75894137 75894097 75894076 75894046 Upstream nucleotide (in genome): t t t t c t c a g c c t a t t a a t t a t t Upstream nucleotide summary: a: 5, c: 4, g: 1, t: 12, other: 0 Downstream nucleotide (in genome): a g g a g a g a g g g t g a a g a g g g c g Downstream nucleotide summary: a: 7, c: 1, g: 13, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 3, at: 0, ca: 0, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 5, tc: 1, tg: 5, tt: 1, other: 0 >chr2:75893973-75894393 (+) gatgcagacaattgggaaagaagggaggtcagagtaactcaccagaccaactcaaagttctaagcttttttctagtgcttgtatatatttaaagctccgtgctacgtgtgggattgtaactgcaagtgggagtgttgcattcaatctctatctcatctttagctagggactagggtctggaaagctttctcgagagtcttggaaagtttcttaatcttaagacagaatgaggtgtatgtgtaagaatgc-ttttattattccatcagatttcaggggctgagaaaacccaggcaggttcttaatgggttggtttttgcattccagttttgtactcaggcaccagtttctccagttttttaatgtttagcttacactttcattaacgttatagtaacgggttcttggaaactgatcgttctgt >CV406833:2-423 (-) gatgcagacaattgggaaagaagggaggtcagagtaactcaccagaccaactcaaagttctaagcttttttctggtgcttgtatatatttaaagctccgtgctgcgtgtgggattgtaactgcaggtgggagtgttgcattcaatctctatctcatctttagctggggactggggtctggagggctttctcgagagtcttggaaagtttcttaatcttgagacagaatgaggtgtatgtgtgggaatgctttttattgttccatcggatttcgggggctgggagaacccgggcaggttcttgatgggttggtttttgcattccggttttgtactcaggcaccagtttctccagttttttgatgtttggcttacactttcattaacgttatggtgacgggttcttggtaactgatcgttctgt End editing Edited EST: DB298425, type: ag Aligns to: chr2:109069918-109070241 (+-) All mismatches: ag (11), ag (14), ag (56), ag (59), ag (66), ag (76), ag (108), ag (121), ag (148), ag (157), ag (162), ag (177), ag (202), ag (211), ag (234), ag (235), ag (263), Editing mismatches: 17, all mismatches: 17, alignment length: 324, cluster length: 253, total number of As: 71 Locations in RNA: 11 14 56 59 66 76 108 121 148 157 162 177 202 211 234 235 263 Locations in genome: 109070231 109070228 109070186 109070183 109070176 109070166 109070134 109070121 109070094 109070085 109070080 109070065 109070040 109070031 109070008 109070007 109069979 Upstream nucleotide (in genome): g c g a a c c a t t a a g c a c c Upstream nucleotide summary: a: 6, c: 6, g: 3, t: 2, other: 0 Downstream nucleotide (in genome): c a g t g g g t g c a c g g g a c Downstream nucleotide summary: a: 3, c: 4, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 2, ca: 2, cc: 1, cg: 3, ct: 0, ga: 0, gc: 1, gg: 2, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr2:109069918-109070241 (+) aaaatattgtttttattccccgtttaaaaacctgagttgcaggccaaatgcagtggctcacacctgtaatcccagcactttgggaggccaaggtgggaggatcacttgaggtcaggagtttgagatcagcctggccagcatggtgaaaccctgtctgtactaaaaatacaacatttagctgggcgtgattgcccacacctgaaatcccaactactcaggaggctgaggcacgaggattgcttgaacccaggaggcagaagttgcaatgagttgagattgagccactgtactccagcctgggcaacacagcaagactccgttttt >DB298425:1-324 (-) aaaatantgtttttatnncccgtttaaaaacctgagttgcaggccaaatgcagtggctcacgcctgtaatcccagcactttgggaggccggggtgggaggatcacttgaggtcgggagtttgggatcagcctggccagcatggtgaagccctgtctgtactagaaatgcaacatttggctgggcgtgattgcccacacctgaagtcccaactactcgggaggctgaggcacgaggattgcttgaacccgggaggcagaggttgcagtgggttgagattgagccactgtactccagcctgggcaacacagcgaggctccgttttt End editing Edited EST: DB346686, type: ag Aligns to: chr2:159595772-159596314 (+-) All mismatches: ag (323), ag (325), ag (337), ag (368), ag (369), ag (392), ag (397), ag (412), ag (433), ag (459), ag (462), ag (465), Editing mismatches: 12, all mismatches: 12, alignment length: 543, cluster length: 143, total number of As: 28 Locations in RNA: 323 325 337 368 369 392 397 412 433 459 462 465 Locations in genome: 159595992 159595990 159595978 159595947 159595946 159595923 159595918 159595903 159595882 159595856 159595853 159595850 Upstream nucleotide (in genome): c t a a t t c g t t g c Upstream nucleotide summary: a: 2, c: 3, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): g c g c a g t g a c c g Downstream nucleotide summary: a: 2, c: 4, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 0, cc: 0, cg: 2, ct: 1, ga: 0, gc: 1, gg: 1, gt: 0, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr2:159595772-159596314 (+) agtggtgcaatctcagctcactgcaagctccacctcctgggttcacgccattctcctgcctcagcctcccgagttgccaggactacaggtgcccgccaccatgcctggctaattttttgtatttttagtagagacgggttttcaccatgttagccaggatggtctcgatctcctaacctcgttatccgcctgcctcggcctcccaaagtgctgggattacaggcatcagccaccgcgcccggcctggaggcctttattctaagtgaagtaacaccagcgtggaaaactaaaaaccatatgttctcactgagaagtgggagctaagctctgagtatacaaaggcatgagtcatagagtggactttagagactcagaaggggaagaatgaaaggggggccagggataaaaaatgacaccttaggtacaatgtatacatacattacttgggtgatgggtgcactaaaatctcagaattcaccgctatgtaattcatccatgtcacaaaaacccacgtgcatcccaaaagctatcacaataaaaatt >DB346686:1-543 (-) agtggtgcaatctcagctcactgcaagctccacctcctgggttcacgccattctcctgcctcagcctcccgagttgccggggctgcaggtgcccgccaccatgcctggctgattttttgtatttttagtagggacgggttttcaccgtgttggccaggatggtctcgatctcctggcctcgttatccgcctgcctcggcctcccaaggtgctgggattgcgggcatcagccaccgcgcccggcctggaggcctttattctaagtgaagtaacaccagcgtggaaaactaaaaaccatatgttctcactgagaagtgggagctaagctctgagtatacaaaggcatgagtcatagagtggactttagagactcagaaggggaagaatgaaaggggggccagggataaaaaatgacaccttaggtacaatgtatacatacattacttgggtgatgggtgcactaaaatctcagaattcaccgctatgtaattcatccatgtcacaaaaacccacgtgcatcccaaaagctatcacaataaaaatt End editing Edited EST: DB348251, type: ag Aligns to: chr2:75894924-75895485 (+-) All mismatches: ag (23), ag (42), ag (54), ag (91), ag (92), ag (134), ag (146), ag (157), ag (158), ag (159), ag (164), ag (165), ag (194), ag (208), ag (211), ag (212), ag (213), ag (216), ag (223), ag (224), ag (240), ag (250), ag (253), ag (265), ag (272), ag (273), ag (278), ag (281), ag (284), ag (298), ag (299), ag (304), ag (310), ag (311), ag (312), ag (319), ag (363), ag (380), Editing mismatches: 38, all mismatches: 38, alignment length: 562, cluster length: 358, total number of As: 126 Locations in RNA: 23 42 54 91 92 134 146 157 158 159 164 165 194 208 211 212 213 216 223 224 240 250 253 265 272 273 278 281 284 298 299 304 310 311 312 319 363 380 Locations in genome: 75895463 75895444 75895432 75895395 75895394 75895352 75895340 75895329 75895328 75895327 75895322 75895321 75895292 75895278 75895275 75895274 75895273 75895270 75895263 75895262 75895246 75895236 75895233 75895221 75895214 75895213 75895208 75895205 75895202 75895188 75895187 75895182 75895176 75895175 75895174 75895167 75895123 75895106 Upstream nucleotide (in genome): a t t a g a a a a t a t t a a a c g a t g g t a a g a a t a a t a a t t a t Upstream nucleotide summary: a: 20, c: 1, g: 5, t: 12, other: 0 Downstream nucleotide (in genome): a g g t a a g a a a g a c t t a a t a a g c a a t a c g c c a g g a a a t g Downstream nucleotide summary: a: 18, c: 5, g: 9, t: 6, other: 0 Dinucleotide summary: aa: 9, ac: 2, ag: 4, at: 5, ca: 1, cc: 0, cg: 0, ct: 0, ga: 2, gc: 1, gg: 1, gt: 1, ta: 6, tc: 2, tg: 4, tt: 0, other: 0 >chr2:75894924-75895485 (+) ctccacttcataatagaccctatggtcaaaggggactaaactaaacctgaacaacattacatggatgatgatttaaatttttaatatataatgcttaaaactatgatataaaaactatagccagaacaatcatggttggctactaattgatatatagttttatggcagactaggtttccattagcaaccagatgaatcaatttccactaacccttttctataattttgatgaatgtgtaagttaaacattaaagagctagagaaactggtgcctgagtacaagaactggaatgcgaaaacaaacccattaagaccctgcctgagttttcccagatcctaaagtctgatcaaataatgaaagcattcttacacatactctttgtaccagggcccacttaagattaaaaaactttccaagactttagagaaagctttacagaccccagacggtagttagattgtacagactgaatgaaacactctcacttgtagatgcactctcccatgtagcatggagcttagaatgcatataagtgctaaagaaaacaaaacaaaacaaaac >DB348251:1-562 (-) ctccacttcataatagaccctatggtcaaaggggactaaactaaacctgaacaacattacatggatgatgatttaaatttttaatatataatgcttaaaactatgatataaaaactatagccagaacaatcatggttggctactaattgatatatagttttatggcagactaggtttccattggcaaccagatgaatcagtttccactaacccttttctataattttgatgaatgtgtaagttgaacattggggagctggagaggctggtgcctgagtgcaggagctggggtgcgaagacaaacccattgaggccctgcctgggttttcccagatcctggagtctggtcgggtagtgaaagcattcttgcacatactctttgtaccagggcccacttgggattgggaaactttccaggactttagagagagctttacagaccccagacggtagttagattgtacagactgggtgaaacactctcacttgtagatgcactctcccatgtggcatggagcttggaatgcatataagtgctagagaaaacaaaacaaaacaaaac End editing Edited EST: DB319522, type: ag Aligns to: chr2:74313419-74313918 (+-) All mismatches: ag (22), ag (31), ag (36), ag (41), ag (46), ag (56), ag (66), ag (76), ag (81), ag (82), ag (98), ag (105), ag (123), ag (141), ag (145), ag (149), ag (167), ag (189), ag (194), ag (199), ag (204), ag (205), ag (233), ag (243), ga (415), Editing mismatches: 24, all mismatches: 25, alignment length: 499, cluster length: 222, total number of As: 60 Locations in RNA: 22 31 36 41 46 56 66 76 81 82 98 105 123 141 145 149 167 189 194 199 204 205 233 243 Locations in genome: 74313897 74313888 74313883 74313878 74313873 74313863 74313853 74313843 74313838 74313837 74313821 74313814 74313796 74313778 74313774 74313770 74313752 74313730 74313725 74313720 74313715 74313714 74313686 74313676 Upstream nucleotide (in genome): c c t c c g a c a t a a t c c t t a t c a c c a Upstream nucleotide summary: a: 7, c: 10, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): a g c c t g g g g a g g g t g g a c g g g a g g Downstream nucleotide summary: a: 4, c: 3, g: 15, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 6, at: 0, ca: 2, cc: 1, cg: 5, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 3, tt: 0, other: 0 >chr2:74313419-74313918 (+) ccaggacagtgtttaggaattaatgagaacccagacctcagacctggatcctgagcagcagagcagtggatgcccagggctctcgcttaaaaaaaaaaaaagtagctttattgagatacaattctcgtaccatacagttcacacatttgaagcatataattcaatggtttttggtgtagtacatttttaaaattgtggtaacagtgtataaacaggctgggtgcagtggctcatgtctgtaatcccagcactttggaaggctgaggcaggaggatcacgtgagccccagcagttcaagaccagcctagacaacatagtgagaccctgtctcttaaaaaattttaaaaagttagccaggcatggtggcgtgtgtctgtagtcccgggtactcaagaaggctgaagtgggaggatcgcttaagcccaggagtttgaagctgcagtgagctatgatcatgccactgtactccagcctgggcaacagagtaagaccctgactct >DB319522:1-499 (-) ccaggncagtgtttaggaattaatgagaacccagacctcanacctggatcctgagcagcagagcagtggatgcccagggctctcactt-aaaaaaaaaaaagtagctttattgagatacaattctcgtaccatacagttcacacatttgaagcatataattcaatggtttttggtgtagtacatttttaaaattgtggtaacagtgtataaacaggctgggtgcagtggctcatgtctgtaatcccagcactttggagggctgaggcgggaggatcacgtgagccccagcagttcgggaccggcctggacagcatagtgagaccctgtctcttgaaaaattttaaaaagttggccgggcgtggtggcgtgtgtctgtggtcccgggtactcaagagggctgaggtgggaggatcgcttgggcccgggagtttgaggctgcagtgggctatgatcgtgccgctgtgctccggcctgggcgacagagtaagaccctgactct End editing Edited EST: DW432321, type: ag Aligns to: chr2:85135128-85135383 (+-) All mismatches: ag (35), ag (57), ag (66), ag (100), ag (104), ag (109), ag (126), ag (142), ag (167), ag (169), ag (179), ag (238), ag (264), Editing mismatches: 13, all mismatches: 13, alignment length: 256, cluster length: 230, total number of As: 45 Locations in RNA: 35 57 66 100 104 109 126 142 167 169 179 238 264 Locations in genome: 85135359 85135337 85135328 85135294 85135290 85135285 85135268 85135252 85135227 85135225 85135215 85135156 85135130 Upstream nucleotide (in genome): t c c c t c t a c t t c c Upstream nucleotide summary: a: 1, c: 7, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): c g c g g t g t g c g g g Downstream nucleotide summary: a: 0, c: 3, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 1, cg: 5, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 3, tt: 0, other: 0 >chr2:85135128-85135383 (+) ccaggctggagtgcaatggtgcaatctcagctcaccacaacttccacacctccgcctcccgagttctcctgcctcagcctcctgagtagctgggattacaggcatgcaccaccacgcccggctaattttgtatttttagtagagacggggtttcgccatgttagccaggctggtcttgaactcctgacctctggtgatccacccgtctcagcctctcaaagtgctgggattacaggcgtgagccaccatgcccggc >DW432321:11-266 (-) ccgggctggagtgcaatggtgcaatctcggctcaccacaacttccacacctccgcctcccgagttctcctgcctcagcctcctgagtggctgggattgcgggcatgcaccaccacgcccggctagttttgtatttttagtggagacggggtttcgccgtgttggccgggctggtcttgaactcctgacctctggtgatccgcccgtctcggcctctcaaagtgctgggattgcaggcgtgagccaccatgcccggc End editing Edited EST: AW089949, type: ag Aligns to: chr2:217366573-217366887 (+-) All mismatches: ag (3), ag (13), ag (14), ag (17), ag (20), ag (22), ag (94), ag (95), ag (159), ag (166), ag (175), ag (189), ag (215), ag (244), ag (246), ag (249), ag (262), ag (264), ag (281), ag (290), ag (298), ag (308), Editing mismatches: 22, all mismatches: 22, alignment length: 315, cluster length: 306, total number of As: 71 Locations in RNA: 3 13 14 17 20 22 94 95 159 166 175 189 215 244 246 249 262 264 281 290 298 308 Locations in genome: 217366885 217366875 217366874 217366871 217366868 217366866 217366794 217366793 217366729 217366722 217366713 217366699 217366673 217366644 217366642 217366639 217366626 217366624 217366607 217366598 217366590 217366580 Upstream nucleotide (in genome): g a a c t c a g c g t c c c c c g t a t c t Upstream nucleotide summary: a: 4, c: 9, g: 4, t: 5, other: 0 Downstream nucleotide (in genome): c c a a g t a a c g c g a t c c g g t c c c Downstream nucleotide summary: a: 5, c: 9, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 1, ca: 2, cc: 4, cg: 1, ct: 2, ga: 1, gc: 1, gg: 2, gt: 0, ta: 0, tc: 3, tg: 2, tt: 0, other: 0 >chr2:217366573-217366887 (+) tgggattacaggcacgcaccaccatacctggctaatttttgtattttgagtagagatggagttttcaccacattggccaggctgttcttgaactgacctcaagcgatccacctgccttggccttccagagtgctgggattacaggtgtgagccaccacgcccagccttgcatttaatatttttataatgtgtctaggctgggtgcggtgactcacgcctgaaatcccagcactttgggtggctgaggcaggtggattacttgaggccaggagattgagaccagtgtggccaacatagcaaaaacccgtctcgacg >AW089949:1-315 (-) tgggattgcaggcacgcgccaccatgcctggctagtttttgtattttgagtggggatggagttttcgccgcgttggccaggctgttcttgaactgacctcgagcgatccacctgccttggccttccggagtgctgggattgcaggtgtgggccaccgcgcccagccttgcatttaatatttttataatgtgtctaggctgggtgcggtgactcacgcctgggatcccagcactttgggtggctgaggcaggtggattacttgaggccaggagattgagaccagtgtggccaacgtggcgaaggcccgtctcggcg End editing Edited EST: BE151163, type: ag Aligns to: chr2:204168138-204168427 (+-) All mismatches: ga (5), ag (6), ag (10), ag (40), ag (65), ag (84), ag (85), ag (90), ag (104), ag (121), ag (125), ag (130), ag (141), ag (159), ac (162), ag (165), ag (169), ag (170), ag (180), ag (187), ag (195), ag (216), ag (219), ag (232), ag (265), ag (281), Editing mismatches: 24, all mismatches: 26, alignment length: 290, cluster length: 276, total number of As: 73 Locations in RNA: 6 10 40 65 84 85 90 104 121 125 130 141 159 165 169 170 180 187 195 216 219 232 265 281 Locations in genome: 204168422 204168418 204168388 204168363 204168344 204168343 204168338 204168324 204168307 204168303 204168298 204168287 204168269 204168263 204168259 204168258 204168248 204168241 204168233 204168212 204168209 204168196 204168163 204168147 Upstream nucleotide (in genome): a a c g a c g c t c a c a t a a c g a g c a t a Upstream nucleotide summary: a: 10, c: 7, g: 4, t: 3, other: 0 Downstream nucleotide (in genome): g c g g g a a g c g t g g c a a t a c g g t a a Downstream nucleotide summary: a: 7, c: 4, g: 10, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 3, at: 2, ca: 1, cc: 0, cg: 5, ct: 1, ga: 2, gc: 0, gg: 2, gt: 0, ta: 1, tc: 2, tg: 0, tt: 0, other: 0 >chr2:204168138-204168427 (+) tattgcaaaaataggccgggcctgtaattccagcactttgggaggccaaggcaggtgaatcacttgaggccaggagtttgagatcagcctggccaacgtggtgaaactccatctctactaaaaataccaaaagtagcgggcgtggtgacaggtgcctctaatcccagctactcgggaggctgaggcaggagaatcgcttgaacccaagagtcggaggttgcagtgagccgagatcgcgccattgcactccagtgtgggtgac-gagcgaaaatccgtctcaaccaagaaaa >BE151163:1-290 (-) tattgcaaagataggccgggcctgtgattccagcactttgggaggccaaggcaggtgagtcacttgaggccgggggtttgagatcagcctggccagcgtggtggaactccgtctctactaggaatgcccaaggtagcgggcgtggtgacgggtgcctctagtcccggctgctcgggaggctgaggcgggagaatcgcttggacccgggagtcggaggttgcagtgggccgagatcgcgccattgcactccg-tgtgggtgaccgagcgaaaatccgtctcagccagaaaaa End editing Edited EST: T06965, type: ag Aligns to: chr3:141599720-141600046 (+-) All mismatches: ag (50), ag (53), ag (61), ag (63), ag (90), ag (113), ag (116), ag (123), ag (149), ag (210), ag (214), ag (220), ag (264), ca (320), Editing mismatches: 13, all mismatches: 14, alignment length: 327, cluster length: 215, total number of As: 56 Locations in RNA: 50 53 61 63 90 113 116 123 149 210 214 220 264 Locations in genome: 141599997 141599994 141599986 141599984 141599957 141599934 141599931 141599924 141599898 141599837 141599833 141599827 141599783 Upstream nucleotide (in genome): g c c t a t a t t c a c c Upstream nucleotide summary: a: 3, c: 5, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): t a g c t c c a g g g c t Downstream nucleotide summary: a: 2, c: 4, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 1, ca: 1, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr3:141599720-141600046 (+) ggggcttcagactccaaggccagagattttttaaaaaacaaaccaggcgggacatggtggctcatgcctgtaatcccagcactttgggagactgaggcgggcggatcacctgaagtcagagttcgagaccagcctggccaacatggcgaaatccgtctttacttaaagtacaaaaattagcccggcatggtggcgggtgcctgtaatcccaactactctggaggctgaggcaggagaattgcttgaacccgggaggtggaggttacagtgagccaagatcgcgccactgcactccagcctgagcgacaagctcaggactccacctcc >T06965:1-327 (-) ggggcttaagactccaaggccagagattttttaaaaaacaaaccaggcgggacatggtggctcgtgcctgtaatcccagcactttgggagactgaggcgggcggatcgcctgaggtcggagttcgagaccagcctggccaacatggcgaaatccgtctttacttaaagtacaaaaattggcccggcatggtggcgggtgcctgtgatcccagctgctctggaggctgaggcaggagagttgcttgaacccgggaggtggaggttgcggtgagccgaggtcgcgccactgcactccagcctgagcnacaagctcaggactccacctcc End editing Edited EST: DB298941, type: ag Aligns to: chr3:158224230-158224710 (+-) All mismatches: ag (124), ag (129), ag (135), ag (138), ag (140), ag (145), ag (146), ag (147), ag (148), ag (149), ag (162), ag (174), ag (177), ag (183), ag (190), ag (209), ag (218), ag (222), ag (223), ag (236), ag (237), ag (311), ag (312), ag (313), ag (318), ag (323), ag (328), ag (331), ag (334), ag (335), ag (350), ag (351), ag (352), ag (353), ag (373), ag (385), ag (388), ag (389), tg (475), ag (478), ga (480), Editing mismatches: 39, all mismatches: 41, alignment length: 482, cluster length: 354, total number of As: 146 Locations in RNA: 124 129 135 138 140 145 146 147 148 149 162 174 177 183 190 209 218 222 223 236 237 311 312 313 318 323 328 331 334 335 350 351 352 353 373 385 388 389 478 Locations in genome: 158224587 158224582 158224576 158224573 158224571 158224566 158224565 158224564 158224563 158224562 158224549 158224537 158224534 158224528 158224521 158224502 158224493 158224489 158224488 158224475 158224474 158224400 158224399 158224398 158224393 158224388 158224383 158224380 158224377 158224376 158224361 158224360 158224359 158224358 158224338 158224326 158224323 158224322 158224234 Upstream nucleotide (in genome): t t t a a a a a a t t t c t t t a a a a c a a t c a c t a t a a a a a a a a t Upstream nucleotide summary: a: 22, c: 4, g: 0, t: 13, other: 0 Downstream nucleotide (in genome): t c g g a a a a a a t t c t a c a g a g a a a a a g g t t a t a a a a g g a t Downstream nucleotide summary: a: 20, c: 3, g: 8, t: 8, other: 0 Dinucleotide summary: aa: 14, ac: 0, ag: 6, at: 2, ca: 2, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 4, tc: 2, tg: 1, tt: 6, other: 0 >chr3:158224230-158224710 (+) gggtat-ttagagactcttattgtacagcctttttcaaagcatgtaacttaaaaaggaaaaacaagcaaaacaccagaatagacgttcctgaaaagaagacgacatataaacggccaacagtatatgaaaaaatgctcaccatcactaattatcagggaagtgcaaattaaaaccacagtgagatatcatctcacctcggttaaaatggccgttactgaaaagacaaaaattagtggttgctggcaaggatgtagacaaaaggaaacccacatacactgttggtgggaatgtaaagtatatagccactatggaaaccagtatggaggttccttaaaaaactaaaagtagaactaccatatgatccaggaatcccactggtgtgtgtgtgtatatattttatatatgtatatatttatatatattttatatatgtatatgtttattttatgtatatatcccaaataaaggaaacagtttatgg >DB298941:1-482 (-) ggatgtggtagagactcttattgtacagcctttttcaaagcatgtaacttaaaaaggaaaaacaagcaaaacaccagaatagacgttcctgaagggaggacgacatatagacggccaacagtatatgaaggggtgctcaccatcactggttgtcggggaggtgcgaattgggaccacagtgagatatcatctcacctcggttaaaatggccgttactgaaaagacaaaaattagtggttgctggcggggatgtagacaaggggagacccacatgcactgttggtgggaatgtgaagtatgtagccgctgtggaaaccagtgtggaggttccttgggggactagaggtggaactgccatgtgatccaggaatcccactggtgtgtgtgtgtatatattttatatatgtatatatttatatatattttatatatgtatatgtttattttatgtatatatcccaaataaaggaaacagtttatgg End editing Edited EST: DB352694, type: ag Aligns to: chr3:10037765-10038142 (+-) All mismatches: ag (65), ag (73), ag (75), ag (80), ag (89), ag (121), ag (125), ag (134), ag (135), ag (161), ag (165), ag (166), ag (167), ag (170), ag (172), ag (175), ag (180), ag (233), ag (265), ga (350), ag (351), Editing mismatches: 20, all mismatches: 21, alignment length: 379, cluster length: 287, total number of As: 80 Locations in RNA: 65 73 75 80 89 121 125 134 135 161 165 166 167 170 172 175 180 233 265 351 Locations in genome: 10038078 10038070 10038068 10038063 10038054 10038022 10038018 10038009 10038008 10037982 10037978 10037977 10037976 10037973 10037971 10037968 10037963 10037910 10037878 10037792 Upstream nucleotide (in genome): c c t g c c t a t t a a a t c a t c c a Upstream nucleotide summary: a: 6, c: 7, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): t g c g g g c t a g a a a c t a c t g g Downstream nucleotide summary: a: 5, c: 4, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 1, at: 1, ca: 0, cc: 0, cg: 4, ct: 3, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 4, tg: 1, tt: 0, other: 0 >chr3:10037765-10038142 (+) ggggacacagaattgccttgttttct-aagaaacatctccatctaatgtgaacttcacgtgggcttgcttttgtttgtggatgccattcactgaaaaagccaggctgtaatcccagcactttgggaggccaaggcaggagaatcacatgtgccctggagtttgagaccagcctgggcaccatggtgaaaccccatctctacaaaaacatacaaaaattagccaggtgtggtggcacacacctgtaatcctagctactcaggaggcggaggtgggaggatccattgaacccagggagttgaggctacagtgagccatgattgtgccactgctctccagcctgggcaacagagtgagactctatctcaaaaatagacacat >DB352694:1-379 (-) ggggncncagaattnccttgttttctaagaaaacatctccatctaatgtgaacttcacgtgggcttgcttttgtttgtggatgccattcactgaaaaagccaggctgtaatcccggcactttgggaggccaaggcaggagaatcacgtgtgccctggagtttgagaccagcctgggcaccatggtgaaaccccatctctgcaaagacgtgcagggattggccaggtgtggtggcacacacctgtggtcctagctgctcgggaggcggaggtgggaggatccattgaacccggggagttggggctgcggtgagccgtgattgtgccactgctctccagcctgggcaacagagtgagactctatctcaaaaatagacacat End editing Edited EST: DB308261, type: ag Aligns to: chr3:37315045-37315590 (+-) All mismatches: ag (12), ag (24), ag (55), ag (75), ag (91), ag (97), ag (98), ag (107), ag (120), ag (144), ag (148), ag (149), ag (154), ag (157), ag (158), ag (159), ag (160), ag (163), ag (175), ag (176), ag (177), ag (182), ag (184), ag (197), ag (205), ag (207), ag (208), ag (213), ag (245), ag (253), Editing mismatches: 30, all mismatches: 30, alignment length: 546, cluster length: 242, total number of As: 65 Locations in RNA: 12 24 55 75 91 97 98 107 120 144 148 149 154 157 158 159 160 163 175 176 177 182 184 197 205 207 208 213 245 253 Locations in genome: 37315579 37315567 37315536 37315516 37315500 37315494 37315493 37315484 37315471 37315447 37315443 37315442 37315437 37315434 37315433 37315432 37315431 37315428 37315416 37315415 37315414 37315409 37315407 37315394 37315386 37315384 37315383 37315378 37315346 37315338 Upstream nucleotide (in genome): g g g c g a g t a c a a t a a a t t a a c c a g g a c g c a Upstream nucleotide summary: a: 12, c: 6, g: 8, t: 4, other: 0 Downstream nucleotide (in genome): g g g g g g a g t g g a g a a a a c a a a t c c g g a g c t Downstream nucleotide summary: a: 10, c: 4, g: 13, t: 3, other: 0 Dinucleotide summary: aa: 6, ac: 1, ag: 3, at: 2, ca: 2, cc: 1, cg: 2, ct: 1, ga: 1, gc: 1, gg: 6, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr3:37315045-37315590 (+) tcgaaatctcctgacagtgttaatggaagtgaaccaagcattcctcaggtctgttactaattgttattttagaaaataacaagtcatttcagagtgttggtcagtctgtgttaattattagcatctgactttacattgaaatggtgatgtccaaatattcagtacagtatatatggtaaacacaggtttgctcatggtttcttggaaaaagttttaaatgaaagcaagactgtattatttctcattttaaaaattaatgcaaggccaggcactgtggctcccgcctgtctgtaatcccagcactttgggaggctgaggtgggcggatcgcttgaggccaagagttcgagactagcttggccaacatggcaaaactctgtctctactaaaaatagaaaaagtcagccaggagtggcgcatgcctgaaatcccagctacttagttggctgaagcgtgagaatcgcttgaacccaggaggcatacgttgtcatgagctgagtttgtgccactgcactccagcctgagcaacagagtgaggctctgtctc >DB308261:1-546 (-) tcgaaatctcctgacagtgttaatggaagtgaaccaagcattcctcaggtctgttactaattgttattttagaaaataacaagtcatttcagagtgttggtcagtctgtgttaattattagcatctgactttacattgaaatggtgatgtccaaatattcagtacagtatatatggtaaacacaggtttgctcatggtttcttggaaaaagttttaaatgaaagcaagactgtattatttctcattttaaaaattaatgcaaggccaggcactgtggctcccgcctgtctgtagtcccagcgctttgggaggctgaggtgggcggatcgcttggggccgggggttcgaggctagcttggccagcgtggcgggactctgtctctgctggggatggaaagggtcggccaggagtggcgcatgcctgaagtcccagctacttggttggctggggcgtgggaatcgcttgaacccgggaggcatacgttgtcatgggctgagtttgtgccactgcactccagcctgggcaacagagtggggctctgtctc End editing Edited EST: DB332114, type: ag Aligns to: chr3:16247640-16248178 (+-) All mismatches: ag (16), ag (29), ag (39), ag (44), ag (49), ag (53), ag (71), ag (78), ag (79), ag (110), ag (114), ag (120), ag (126), ag (146), ag (149), ag (150), ag (159), ag (185), ag (204), ag (209), ag (217), ag (253), ag (279), ag (280), Editing mismatches: 24, all mismatches: 24, alignment length: 537, cluster length: 267, total number of As: 67 Locations in RNA: 16 29 39 44 49 53 71 78 79 110 114 120 126 146 149 150 159 185 204 209 217 253 279 280 Locations in genome: 16248163 16248150 16248140 16248135 16248130 16248126 16248108 16248101 16248100 16248069 16248065 16248059 16248053 16248033 16248030 16248029 16248020 16247994 16247975 16247970 16247962 16247926 16247898 16247897 Upstream nucleotide (in genome): a c c c g a g a g t c t c t a a a a g c c a a a Upstream nucleotide summary: a: 10, c: 7, g: 4, t: 3, other: 0 Downstream nucleotide (in genome): a g c c g c g c a c g g c g t a a c t g c t g a Downstream nucleotide summary: a: 5, c: 8, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 3, ag: 1, at: 2, ca: 0, cc: 4, cg: 3, ct: 0, ga: 1, gc: 0, gg: 2, gt: 1, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr3:16247640-16248178 (+) ttgggaggccaaggctggcagatcactttgagctcaggagttcgagactagcctcaacaacatggcgaaatcccatttctacacgcacacacacccccacactagccgggcatggtggctcatgcctgtagtcccagctactcggggagctgaggctgaagaatccttgggcctgggaagtggaggttgcagtgagcgcagattgtgccactgcactccagtctgggcgacagagtgagaccatttaaaaaaaaaaaaaggccgggcgcgatggttcacgcctgtaatccccagcactttgggaggctgaggttgggggatcactaggtcaggagatcgagaccatcctggctaacacggtgaaaacccgtgtatactaaaaatacaaaaattagccgggcgttgtggcgggcacctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgaaccgagatcacgccactgccctccagcctggataacaaagcgagactctgtct >DB332114:1-537 (-) ttggnaggccaaggctggcagatcactttgagctcaggagttcgagactagcctcaacaacatggcgaaatcccatttntacacgcacacacacccccacactagccgggcatggtggctcatgcctgtagtcccagctactcggggagctgaggctgaagaatccttgggcctgggaagtggaggttgcagtgagcgcagattgtgccactgcactccagtctgggcgacagagtgagaccatttaaaaaaaaaaagg--ccgggcgcgatggttcacgcctgtagtccccagcactttgggaggctgaggttgggggatcgctaggtcgggaggtcgagaccatcctggctagcacggtgaaaacccgtgtatactaagaatacaaaggttggccgggcgttgtggcgggcgcctgtggtcccggctgcttgggaggctgaggcaggagaatggcgtgggcctggggggcggagcttgcagtgagccgggatcgcgccgctgccctccggcctggataacagagcgagactctgtct End editing Edited EST: BI011008, type: ag Aligns to: chr3:183879216-183879642 (+-) All mismatches: ag (8), ct (13), ag (38), ag (39), ag (51), ag (67), ag (72), ag (73), ag (79), ag (81), ag (83), ag (93), ag (98), ag (102), ag (105), ag (114), ag (117), ag (196), ag (238), ag (242), ag (247), ag (248), ag (249), ag (276), ag (277), ag (299), ac (427), Editing mismatches: 25, all mismatches: 27, alignment length: 427, cluster length: 292, total number of As: 74 Locations in RNA: 8 38 39 51 67 72 73 79 81 83 93 98 102 105 114 117 196 238 242 247 248 249 276 277 299 Locations in genome: 183879642 183879612 183879611 183879599 183879583 183879578 183879577 183879571 183879569 183879567 183879557 183879552 183879548 183879545 183879536 183879533 183879454 183879412 183879408 183879403 183879402 183879401 183879374 183879373 183879351 Upstream nucleotide (in genome): g a a a t a a c t a a t t t t c t t t a a c a c t Upstream nucleotide summary: a: 10, c: 4, g: 1, t: 10, other: 0 Downstream nucleotide (in genome): n t a g t g a g c t g g t t c t c c g c a a a a t Downstream nucleotide summary: a: 6, c: 5, g: 6, t: 7, other: 1 Dinucleotide summary: aa: 4, ac: 1, ag: 3, at: 2, ca: 2, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 4, tg: 2, tt: 4, other: 1 >chr3:183879216-183879642 (+) aaaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatatttgacagtctgagggtcctcaaacttttccactccccttcctagccccaaactgtagttactgcctgacttcttgcctcaccacattcccccggccaaactacatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacattacctctgttattatataggaaagaatgtgaaatacagtggaaagagtatggattttggagtcaagcctggggtgaaattccagctctgacatctaccagtcctgtga >BI011008:8-434 (-) aaaaaaacaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatgtttgacagtctgagggtcctcggacttttccactccccttcctagccccgggctgtggttgctgcctgacttcttgcctcaccacattcccccggccaaactgcatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacgttgcctctgttgttgtatgggaaggaatgtgaagtgcggtggagggagtgtggattttggagtcaggcctggggtgaggttccagctctgacatctaccagtcttgtgg End editing Edited EST: BI011070, type: ag Aligns to: chr3:183879216-183879642 (+-) All mismatches: ag (8), ct (13), ag (38), ag (39), ag (51), ag (67), ag (72), ag (73), ag (79), ag (81), ag (83), ag (93), ag (98), ag (102), ag (105), ag (114), ag (117), ag (196), ag (238), ag (242), ag (247), ag (248), ag (249), ag (276), ag (277), ag (299), Editing mismatches: 25, all mismatches: 26, alignment length: 427, cluster length: 292, total number of As: 74 Locations in RNA: 8 38 39 51 67 72 73 79 81 83 93 98 102 105 114 117 196 238 242 247 248 249 276 277 299 Locations in genome: 183879642 183879612 183879611 183879599 183879583 183879578 183879577 183879571 183879569 183879567 183879557 183879552 183879548 183879545 183879536 183879533 183879454 183879412 183879408 183879403 183879402 183879401 183879374 183879373 183879351 Upstream nucleotide (in genome): g a a a t a a c t a a t t t t c t t t a a c a c t Upstream nucleotide summary: a: 10, c: 4, g: 1, t: 10, other: 0 Downstream nucleotide (in genome): n t a g t g a g c t g g t t c t c c g c a a a a t Downstream nucleotide summary: a: 6, c: 5, g: 6, t: 7, other: 1 Dinucleotide summary: aa: 4, ac: 1, ag: 3, at: 2, ca: 2, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 4, tg: 2, tt: 4, other: 1 >chr3:183879216-183879642 (+) aaaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatatttgacagtctgagggtcctcaaacttttccactccccttcctagccccaaactgtagttactgcctgacttcttgcctcaccacattcccccggccaaactacatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacattacctctgttattatataggaaagaatgtgaaatacagtggaaagagtatggattttggagtcaagcctggggtgaaattccagctctgacatctaccagtcctgtga >BI011070:8-434 (-) aaaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatgtttgacagtctgagggtcctcggacttttccactccccttcctagccccgggctgtggttgctgcctgacttcttgcctcaccacattcccccggccaaactgcatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacgttgcctctgttgttgtatgggaaggaatgtgaagtgcggtggagggagtgtggattttggagtcaggcctggggtgaggttccagctctgacatctaccagtcttgtgg End editing Edited EST: BI011197, type: ag Aligns to: chr3:183879216-183879642 (+-) All mismatches: ag (8), ag (37), ag (38), ga (42), ga (49), ag (50), ag (66), ag (71), ag (72), ag (78), ag (80), ag (82), ag (92), ag (97), ag (101), ag (104), ag (113), ag (116), ag (195), ag (237), ag (241), ag (246), ag (247), ag (248), ag (275), ag (276), ag (298), ag (431), Editing mismatches: 26, all mismatches: 28, alignment length: 426, cluster length: 425, total number of As: 104 Locations in RNA: 8 37 38 50 66 71 72 78 80 82 92 97 101 104 113 116 195 237 241 246 247 248 275 276 298 431 Locations in genome: 183879642 183879612 183879611 183879599 183879583 183879578 183879577 183879571 183879569 183879567 183879557 183879552 183879548 183879545 183879536 183879533 183879454 183879412 183879408 183879403 183879402 183879401 183879374 183879373 183879351 183879218 Upstream nucleotide (in genome): g a a a t a a c t a a t t t t c t t t a a c a c t a Upstream nucleotide summary: a: 11, c: 4, g: 1, t: 10, other: 0 Downstream nucleotide (in genome): n t a g t g a g c t g g t t c t c c g c a a a a t a Downstream nucleotide summary: a: 7, c: 5, g: 6, t: 7, other: 1 Dinucleotide summary: aa: 5, ac: 1, ag: 3, at: 2, ca: 2, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 4, tg: 2, tt: 4, other: 1 >chr3:183879216-183879642 (+) aaaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatatttgacagtctgagggtcctcaaacttttccactccccttcctagccccaaactgtagttactgcctgacttcttgcctcaccacattcccccggccaaactacatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacattacctctgttattatataggaaagaatgtgaaatacagtggaaagagtatggattttggagtcaagcctggggtgaaattccagctctgacatctaccagtcctgtga >BI011197:8-433 (-) aagaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatgtttgacagtctgagggtcctcggacttttccactccccttcctagccccgggctgtggttgctgcctgacttcttgcctcaccacattcccccggccaaactgcatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacgttgcctctgttgttgtatgggaaggaatgtgaagtgcggtggagggagtgtggattttggagtcagacctgggatgaggttccagctctgacatctaccagtc-tgtgg End editing Edited EST: BI011571, type: ag Aligns to: chr3:183879216-183879642 (+-) All mismatches: ag (8), ag (37), ag (38), ga (42), ga (49), ag (50), ag (66), ag (71), ag (72), ag (78), ag (80), ag (82), ag (92), ag (97), ag (101), ag (104), ag (113), ag (116), ag (195), ag (237), ag (241), ag (246), ag (247), ag (248), ag (275), ag (276), ag (298), ag (431), Editing mismatches: 26, all mismatches: 28, alignment length: 426, cluster length: 425, total number of As: 104 Locations in RNA: 8 37 38 50 66 71 72 78 80 82 92 97 101 104 113 116 195 237 241 246 247 248 275 276 298 431 Locations in genome: 183879642 183879612 183879611 183879599 183879583 183879578 183879577 183879571 183879569 183879567 183879557 183879552 183879548 183879545 183879536 183879533 183879454 183879412 183879408 183879403 183879402 183879401 183879374 183879373 183879351 183879218 Upstream nucleotide (in genome): g a a a t a a c t a a t t t t c t t t a a c a c t a Upstream nucleotide summary: a: 11, c: 4, g: 1, t: 10, other: 0 Downstream nucleotide (in genome): n t a g t g a g c t g g t t c t c c g c a a a a t a Downstream nucleotide summary: a: 7, c: 5, g: 6, t: 7, other: 1 Dinucleotide summary: aa: 5, ac: 1, ag: 3, at: 2, ca: 2, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 4, tg: 2, tt: 4, other: 1 >chr3:183879216-183879642 (+) aaaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatatttgacagtctgagggtcctcaaacttttccactccccttcctagccccaaactgtagttactgcctgacttcttgcctcaccacattcccccggccaaactacatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacattacctctgttattatataggaaagaatgtgaaatacagtggaaagagtatggattttggagtcaagcctggggtgaaattccagctctgacatctaccagtcctgtga >BI011571:8-433 (-) aagaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatgtttgacagtctgagggtcctcggacttttccactccccttcctagccccgggctgtggttgctgcctgacttcttgcctcaccacattcccccggccaaactgcatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacgttgcctctgttgttgtatgggaaggaatgtgaagtgcggtggagggagtgtggattttggagtcagacctgggatgaggttccagctctgacatctaccagtc-tgtgg End editing Edited EST: BI011971, type: ag Aligns to: chr3:183879217-183879642 (+-) All mismatches: ag (15), ag (45), ag (46), ga (52), ag (58), ag (74), ag (79), ag (80), ag (81), ag (86), ag (88), ag (90), ag (100), ag (105), ag (109), ag (112), ag (121), ag (124), ag (203), ag (245), ag (249), ag (254), ag (255), ag (256), ag (283), ag (284), ag (306), Editing mismatches: 26, all mismatches: 27, alignment length: 426, cluster length: 292, total number of As: 74 Locations in RNA: 15 45 46 58 74 79 80 81 86 88 90 100 105 109 112 121 124 203 245 249 254 255 256 283 284 306 Locations in genome: 183879642 183879612 183879611 183879599 183879583 183879578 183879577 183879576 183879571 183879569 183879567 183879557 183879552 183879548 183879545 183879536 183879533 183879454 183879412 183879408 183879403 183879402 183879401 183879374 183879373 183879351 Upstream nucleotide (in genome): g a a a t a a g c t a a t t t t c t t t a a c a c t Upstream nucleotide summary: a: 10, c: 4, g: 2, t: 10, other: 0 Downstream nucleotide (in genome): n t a g t g a a g c t g g t t c t c c g c a a a a t Downstream nucleotide summary: a: 7, c: 5, g: 6, t: 7, other: 1 Dinucleotide summary: aa: 4, ac: 1, ag: 3, at: 2, ca: 2, cc: 0, cg: 1, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 4, tg: 2, tt: 4, other: 1 >chr3:183879217-183879642 (+) aaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatatttgacagtctgagggtcctcaaacttttccactccccttcctagccccaaactgtagttactgcctgacttcttgcctcaccacattcccccggccaaactacatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacattacctctgttattatataggaaagaatgtgaaatacagtggaaagagtatggattttggagtcaagcctggggt-gaaattccagctctgacatctaccagtcct-gtga >BI011971:15-440 (-) aaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatgtttgacagtctgagggtcctcggacttttccactccccttcctagccccgggctgtggttgctgcctgacttcttgcctcaccacattcccccggccaaactgcatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacgttgcctctgttgttgtatgggaaggaatgtgaagtgcggtggggggagtgtggattttggagtcaggcctgag-tcgaggttccagctctgacatc-accagtccttgtgg End editing Edited EST: BI011981, type: ag Aligns to: chr3:183879218-183879642 (+-) All mismatches: ag (18), ga (36), ca (38), ag (47), ag (48), ag (59), ag (75), ag (80), ag (81), ag (82), ag (87), ag (89), ag (91), ag (101), ag (106), ag (110), ag (113), ag (122), ag (125), ag (204), ag (246), ag (250), ag (255), ag (256), ag (257), ag (284), ag (285), ag (307), Editing mismatches: 26, all mismatches: 28, alignment length: 423, cluster length: 292, total number of As: 74 Locations in RNA: 18 47 48 59 75 80 81 82 87 89 91 101 106 110 113 122 125 204 246 250 255 256 257 284 285 307 Locations in genome: 183879642 183879612 183879611 183879599 183879583 183879578 183879577 183879576 183879571 183879569 183879567 183879557 183879552 183879548 183879545 183879536 183879533 183879454 183879412 183879408 183879403 183879402 183879401 183879374 183879373 183879351 Upstream nucleotide (in genome): g a a a t a a g c t a a t t t t c t t t a a c a c t Upstream nucleotide summary: a: 10, c: 4, g: 2, t: 10, other: 0 Downstream nucleotide (in genome): n t a g t g a a g c t g g t t c t c c g c a a a a t Downstream nucleotide summary: a: 7, c: 5, g: 6, t: 7, other: 1 Dinucleotide summary: aa: 4, ac: 1, ag: 3, at: 2, ca: 2, cc: 0, cg: 1, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 4, tg: 2, tt: 4, other: 1 >chr3:183879218-183879642 (+) aaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatatttgacagtctgagggtcctcaaacttttccactccccttcctagccccaaactgtagttactgcctgacttcttgcctcaccacattcccccggccaaactacatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacattacctctgttattatataggaaagaatgtgaaatacagtggaaagagtatggattttggagtcaagcctggggtgaaattccagctctgacatctaccagtcctgtga >BI011981:18-440 (-) aaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatgtttgacagtctgagggtcctcggacttttccactccccttcctagccccgggctgtggttgctgcctgacttcttgcctcaccacattcccccggccaaactgcatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacgttgcctctgttgttgtatgggaaggaatgtgaagtgcggtggggggagtgtggattttggagtcaggcctggg-tgaggttccagctata-catctaccagtcntgtgg End editing Edited EST: BI012070, type: ag Aligns to: chr3:183879216-183879632 (+-) All mismatches: ag (33), ag (34), gc (39), ga (40), ag (46), ag (62), ag (67), ag (68), ag (74), ag (76), ag (78), ag (88), ag (93), ag (97), ag (100), ag (109), ag (112), ag (191), ag (233), ag (237), ag (242), ag (243), ag (244), ag (271), ag (272), ag (294), Editing mismatches: 24, all mismatches: 26, alignment length: 418, cluster length: 262, total number of As: 68 Locations in RNA: 33 34 46 62 67 68 74 76 78 88 93 97 100 109 112 191 233 237 242 243 244 271 272 294 Locations in genome: 183879612 183879611 183879599 183879583 183879578 183879577 183879571 183879569 183879567 183879557 183879552 183879548 183879545 183879536 183879533 183879454 183879412 183879408 183879403 183879402 183879401 183879374 183879373 183879351 Upstream nucleotide (in genome): a a a t a a c t a a t t t t c t t t a a c a c t Upstream nucleotide summary: a: 10, c: 4, g: 0, t: 10, other: 0 Downstream nucleotide (in genome): t a g t g a g c t g g t t c t c c g c a a a a t Downstream nucleotide summary: a: 6, c: 5, g: 6, t: 7, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 3, at: 2, ca: 2, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 4, tg: 2, tt: 4, other: 0 >chr3:183879216-183879632 (+) aaaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatatttgacagtctgagggtcctcaaacttttccactccccttcctagccccaaactgtagttactgcctgacttcttgcctcaccacattcccccggccaaactacatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacattacctctgttattatataggaaagaatgtgaaatacagtggaaagagtatggattttggagtcaagcctggggt-gaaattccagctctgaca-tctacc >BI012070:12-429 (-) aaaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatgtttgacagtctgagggtcctcggacttttccactccccttcctagccccgggctgtggttgctgcctgacttcttgcctcaccacattcccccggccaaactgcatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacgttgcctctgttgttgtatgggaaggaatgtgaagtgcggtggagggagtgtggattttggagtcaggcctgac-tcgaggttccagctctgacaatctacc End editing Edited EST: BI012138, type: ag Aligns to: chr3:183879214-183879643 (+-) All mismatches: ag (18), ga (38), ag (49), ag (50), ag (62), ag (78), ag (83), ag (84), ag (90), ag (92), ag (94), ag (104), ag (109), ag (113), at (116), ag (125), ag (128), ag (207), ag (249), ag (253), ag (258), ag (259), ag (260), ag (287), ag (288), ag (310), Editing mismatches: 24, all mismatches: 26, alignment length: 431, cluster length: 292, total number of As: 74 Locations in RNA: 18 49 50 62 78 83 84 90 92 94 104 109 113 125 128 207 249 253 258 259 260 287 288 310 Locations in genome: 183879642 183879612 183879611 183879599 183879583 183879578 183879577 183879571 183879569 183879567 183879557 183879552 183879548 183879536 183879533 183879454 183879412 183879408 183879403 183879402 183879401 183879374 183879373 183879351 Upstream nucleotide (in genome): g a a a t a a c t a a t t t c t t t a a c a c t Upstream nucleotide summary: a: 10, c: 4, g: 1, t: 9, other: 0 Downstream nucleotide (in genome): c t a g t g a g c t g g t c t c c g c a a a a t Downstream nucleotide summary: a: 6, c: 6, g: 6, t: 6, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 3, at: 2, ca: 2, cc: 0, cg: 1, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 4, tg: 2, tt: 3, other: 0 >chr3:183879214-183879643 (+) caaaaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatatttgacagtctgagggtcctcaaacttttccactccccttcctagccccaaactgtagttactgcctgacttcttgcctcaccacattcccccggccaaactacatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacattacctctgttattatataggaaagaatgtgaaatacagtggaaagagtatggattttggagtcaagcctggggtgaaattccagctctgacatctaccagtcct-gtgac >BI012138:17-447 (-) caaaaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatgtttgacagtctgagggtcctcggacttttccactccccttcctagccccgggctgtggttgctgcctgacttcttgcctcaccacattcccccggccaaactgcatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacgttgcctctgtttttgtatgggaaggaatgtgaagtgcggtggagggagtgtggattttggagtcaggcctggggtgaggttccagctctaacatctaccagtccttgtggc End editing Edited EST: BI012157, type: ag Aligns to: chr3:183879217-183879643 (+-) All mismatches: ag (14), ag (45), ag (46), ag (57), ag (73), ag (78), ag (79), ag (85), ag (87), ag (89), ag (99), ag (104), ag (108), ag (111), ag (120), ag (123), ag (202), tc (242), ag (244), ag (248), ag (253), ag (254), ag (255), ag (282), ag (283), ag (305), Editing mismatches: 25, all mismatches: 26, alignment length: 427, cluster length: 292, total number of As: 74 Locations in RNA: 14 45 46 57 73 78 79 85 87 89 99 104 108 111 120 123 202 244 248 253 254 255 282 283 305 Locations in genome: 183879642 183879612 183879611 183879599 183879583 183879578 183879577 183879571 183879569 183879567 183879557 183879552 183879548 183879545 183879536 183879533 183879454 183879412 183879408 183879403 183879402 183879401 183879374 183879373 183879351 Upstream nucleotide (in genome): g a a a t a a c t a a t t t t c t t t a a c a c t Upstream nucleotide summary: a: 10, c: 4, g: 1, t: 10, other: 0 Downstream nucleotide (in genome): c t a g t g a g c t g g t t c t c c g c a a a a t Downstream nucleotide summary: a: 6, c: 6, g: 6, t: 7, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 3, at: 2, ca: 2, cc: 0, cg: 1, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 4, tg: 2, tt: 4, other: 0 >chr3:183879217-183879643 (+) aaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatatttgacagtctgagggtcctcaaacttttccactccccttcctagccccaaactgtagttactgcctgacttcttgcctcaccacattcccccggccaaactacatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacattacctctgttattatataggaaagaatgtgaaatacagtggaaagagtatggattttggagtcaagcctggggt-gaaattccagctctgacatctaccagtcct-gtgac >BI012157:13-439 (-) aaaaaaaaaaccaaagaacaagtggggactgaacttcccaacctcctccttgctgtcttccctctctgctcagagctcctggcatgcgtcatcttacccttggtcatgtcttcccatctctgtactcctggcatgtttgacagtctgagggtcctcggacttttccactccccttcctagccccgggctgtggttgccgcctgacttcttgcctcaccacattcccccggccaaactgcatgctccgtgaccacattccacacccttcatgcctcacatcattgtcctccagcacccactctccacatagacccacgttgcctctgttgttgtatgggaaggaatgtgaagtgcggtggagggagtgtggattttggagtcaggcctgg--tcgaggttccagctctgacatctaccagtccttgtggc End editing Edited EST: BF941359, type: ag Aligns to: chr3:141599562-141600050 (+-) All mismatches: ag (55), ag (58), ag (66), ag (68), ag (86), ag (118), ag (121), ag (127), ag (128), ag (154), ag (158), ag (159), ag (160), ag (207), ag (219), ag (225), ag (269), ga (282), Editing mismatches: 17, all mismatches: 18, alignment length: 490, cluster length: 215, total number of As: 56 Locations in RNA: 55 58 66 68 86 118 121 127 128 154 158 159 160 207 219 225 269 Locations in genome: 141599997 141599994 141599986 141599984 141599966 141599934 141599931 141599925 141599924 141599898 141599894 141599893 141599892 141599845 141599833 141599827 141599783 Upstream nucleotide (in genome): g c c t a t a a t t a a a g a c c Upstream nucleotide summary: a: 7, c: 4, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): t a g c c c c t a g a a a g g c t Downstream nucleotide summary: a: 5, c: 5, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 1, at: 1, ca: 1, cc: 1, cg: 1, ct: 1, ga: 0, gc: 0, gg: 1, gt: 1, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr3:141599562-141600050 (+) ccccagtgtaaactgtatttgttactttggctcatagtccaaaaactcttgaaagccactaatctagcccagtgccttcatttcataggtggcaaaattaaacctatgggtcatctgatttgccaaaattcactcagggagttagtgataaaatccttggggcttcagactccaaggccagagattttttaaaaaacaaaccaggc-gggacatggtggctcatgcctgtaatcccagcactttgggagactgaggcgggcggatcacctgaagtcagagttcgagaccagcctggccaacatggcgaaatccgtctttacttaaagtacaaaaattagcccggcatggtggcgggtgcctgtaatcccaactactctggaggctgaggcaggagaattgcttgaacccgggaggtggaggttacagtgagccaagatcg-cgccactgcactccagcctgagcgacaagctcaggactccacctccaaaa >BF941359:1-490 (-) ccccagtgtaaactgtatttgttactttggctcatagtccaaaaactcttgaaagccactaatctagcccagtgccttcatttcataggtggcaaaattaaacctatgggtcatctgatttgccaaaattcactcagggagttagtgataaaatccttggggcttcagactccaaggccagagattttttaaaaaac-aaccaggcgggaacatggtggctcgtgcctgtaatcccagcactttgggagactgaggcgggcggatcgcctgaggtcagagttcgggaccagcctggccaacatggcgaaatccgtctttacttaaagtacagggattggcccggcatggtggcgggtgcctgtggtcccagctgctctggaggctgaggcaggagaattgcttgagcccgggaggtggaggttgcggtgagccgaggtcggcgccactgcactccagcctgagcgacaagctcaggactccacctccaaaa End editing Edited EST: AW451359, type: ag Aligns to: chr3:188598726-188598951 (+-) All mismatches: ag (20), ga (21), ga (22), ta (24), ag (26), ag (27), ag (31), ag (61), ag (62), ag (78), ag (89), ag (93), ag (98), ag (114), ag (122), ag (123), ag (131), ag (134), ag (141), ag (150), ag (154), ag (164), ag (190), ag (194), ag (195), ag (197), ag (200), ag (229), ag (230), ag (231), ag (239), ag (240), Editing mismatches: 29, all mismatches: 32, alignment length: 225, cluster length: 222, total number of As: 80 Locations in RNA: 20 26 27 31 61 62 78 89 93 98 114 122 123 131 134 141 150 154 164 190 194 195 197 200 229 230 231 239 240 Locations in genome: 188598951 188598945 188598944 188598940 188598910 188598909 188598893 188598882 188598878 188598873 188598857 188598849 188598848 188598840 188598837 188598830 188598821 188598817 188598807 188598781 188598777 188598776 188598774 188598771 188598741 188598740 188598739 188598731 188598730 Upstream nucleotide (in genome): g a a a a a c t g g a a g a g g c t t t a a a t a a g a t Upstream nucleotide summary: a: 14, c: 2, g: 7, t: 6, other: 0 Downstream nucleotide (in genome): n a a a g a g g g g g c a t g g g c g g a a a c c a a c a Downstream nucleotide summary: a: 11, c: 5, g: 11, t: 1, other: 1 Dinucleotide summary: aa: 8, ac: 3, ag: 2, at: 1, ca: 0, cc: 0, cg: 2, ct: 0, ga: 2, gc: 0, gg: 4, gt: 0, ta: 1, tc: 2, tg: 3, tt: 0, other: 1 >chr3:188598726-188598951 (+) ggctaacacggtgaaaccccgtctctactaaaaaaaaaaaaaaatacaaaaaattagcctggctcagtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaagcggagctttcagtgagccgagatagcgccactgcagtccggcctgggcgaaagagcgagactccgtctcaaaaaaaaaaaaaaaaaaatagga >AW451359:20-244 (-) ggctggcacggtggggccccgtctntact-aaaaaaaaaaaaaatgcagaggattggcctggctcagtggcgggcgcctgtggtcccagctgctcgggaggctggggcaggggagtggcgtgggcccgggaggcggagctttcagtgggccgggatggcgccactgcggtccggcctgggcgagggagcgagactccgtctcaaaaaaaaaaaagaaaggaaaaag End editing Edited EST: AI473461, type: ag Aligns to: chr3:61809521-61809801 (+-) All mismatches: ag (55), ag (83), ag (110), ag (111), ag (119), ag (125), ag (147), ag (151), ag (157), ag (185), ag (218), ag (221), ag (226), ag (248), ag (274), Editing mismatches: 15, all mismatches: 15, alignment length: 282, cluster length: 219, total number of As: 57 Locations in RNA: 55 83 110 111 119 125 147 151 157 185 218 221 226 248 274 Locations in genome: 61809747 61809719 61809692 61809691 61809683 61809677 61809655 61809651 61809645 61809617 61809584 61809581 61809576 61809554 61809529 Upstream nucleotide (in genome): c a a c c t c t a c a c c g c Upstream nucleotide summary: a: 4, c: 8, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): a c g a g g g g a g g c g c g Downstream nucleotide summary: a: 3, c: 3, g: 9, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 0, ca: 2, cc: 1, cg: 5, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr3:61809521-61809801 (+) ctgggtgcagtggctcacg-cctgtaatcccaggactttgggaggccgaggtgggcagatcacaaggtcaggagatcgagaccatcctggctaacacagggaaaccccg-tctctactaaattacaaaaattagccaggcgtggtggcgggcgcctgtagtcccagctactcaagaggctgaggcaggagaatggcatgaacctgggacgcggagcttgcagtgagccaagatcgctccactgcactccattcagcctgggcgacagagcgagactccgtctc >AI473461:1-282 (-) ctgggtgcggtggctcacgccctgtaatcccagggctttgggaggccgaggtgggcggatcgcagggtcaggagatcgagaccatcctggctaacacggggaaacnccgttct-tactaaattacagaaattggccgggcgtggtggcgggcgcctgtggtcccggctactcgggaggctgaggcaggagaatggcatgagcctgggacgcggagcttgcagtgagccgagatcgctccactgcactccattcagcctgggcgacagagcgagactccgtctc End editing Edited EST: T06551, type: ag Aligns to: chr4:57198278-57198574 (+-) All mismatches: ag (10), ag (11), ag (17), ag (18), ag (24), ag (32), ag (53), ag (60), ag (66), ag (91), ag (92), ag (116), ag (149), ag (158), ag (166), ag (210), ag (242), ag (257), ag (271), Editing mismatches: 19, all mismatches: 19, alignment length: 298, cluster length: 262, total number of As: 50 Locations in RNA: 10 11 17 18 24 32 53 60 66 91 92 116 149 158 166 210 242 257 271 Locations in genome: 57198565 57198564 57198558 57198557 57198551 57198543 57198522 57198515 57198509 57198484 57198483 57198459 57198426 57198417 57198409 57198365 57198333 57198318 57198304 Upstream nucleotide (in genome): a t a t t t t t g a g c t t a t t t t Upstream nucleotide summary: a: 4, c: 1, g: 2, t: 12, other: 0 Downstream nucleotide (in genome): g a c a g t g a a g a t g g g a a g g Downstream nucleotide summary: a: 7, c: 1, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 3, at: 0, ca: 0, cc: 0, cg: 0, ct: 1, ga: 2, gc: 0, gg: 0, gt: 0, ta: 5, tc: 0, tg: 6, tt: 1, other: 0 >chr4:57198278-57198574 (+) cttgtaaatttgtttgagtt-cattgtagattctggatattagccctttgtcagataagtaggttgtgaaaattttctcccattttgtaagttgcctgttcactctgatggtagtttcttttgctgtgcagaagctctttagtttgattagatcccatttgtcaattttggcttttgttgccatggcttttggtgttttagacatgaagtccttgcccatgcctatgtcctgaatggtaatgcctaggttttcttctagggtttttatggttttaggtctaacgtttaagtctttaat >T06551:1-298 (-) cttgtaaatttgtttgagttccattgtggantctggatattggccctttgtcagatgagtaggttgtgaaaattttctcccattttgtgagttgcctgttcactctgatggtagtttcttttgctgtgcagaggctctttggtttgattggatcccatttgtcaattttggcttttgttgccgtggcttttggtgttttagacatggggtccttgcccatgcctatgtcctggatggtgatgcctgggttttcttctagggtttttgtggttttgggtctggcgtttgggtctttaat End editing Edited EST: DB345565, type: ag Aligns to: chr4:89424677-89425217 (+-) All mismatches: ag (25), ag (43), ag (50), ag (55), ag (56), ag (58), ag (75), ag (88), ag (89), ag (91), ag (94), ag (98), ag (99), ag (120), ag (127), ag (131), ag (139), ag (147), ag (154), ag (155), ag (158), ag (161), ag (173), ag (178), ag (180), ag (181), ag (188), ag (189), ag (217), ag (224), ag (225), ag (229), ag (264), ag (278), at (404), Editing mismatches: 34, all mismatches: 35, alignment length: 541, cluster length: 254, total number of As: 75 Locations in RNA: 25 43 50 55 56 58 75 88 89 91 94 98 99 120 127 131 139 147 154 155 158 161 173 178 180 181 188 189 217 224 225 229 264 278 Locations in genome: 89425193 89425175 89425168 89425163 89425162 89425160 89425143 89425130 89425129 89425127 89425124 89425120 89425119 89425098 89425091 89425087 89425079 89425071 89425064 89425063 89425060 89425057 89425045 89425040 89425038 89425037 89425030 89425029 89425001 89424994 89424993 89424989 89424954 89424940 Upstream nucleotide (in genome): c c a a t a c a g g c a t a c c c t a a t a c a a t a c a a c c a c Upstream nucleotide summary: a: 15, c: 12, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): g c g g a t g t a g g g a t c g t g a a c a t c a a c a g a a g c g Downstream nucleotide summary: a: 11, c: 6, g: 12, t: 5, other: 0 Dinucleotide summary: aa: 5, ac: 3, ag: 4, at: 3, ca: 2, cc: 2, cg: 6, ct: 2, ga: 1, gc: 0, gg: 1, gt: 0, ta: 3, tc: 1, tg: 1, tt: 0, other: 0 >chr4:89424677-89425217 (+) aagtttcgttattactaagcacataacagatttttgaattgttttaccttcctggtatatgactcggttgtcattagtaaatgtacttttctatccttgtcttgtttgtctgattttagtatagttacaccacattcattttggttgatgtttgcatagtgtatctttttcccttctttgactttaatctgtgttttcacatttaagttatatatgttataagcagcatatgatggagttgttataaaaattacattagggccaggtgcggtggctaacgtctgtaatcccagcactttgggaggccgaggcaggcaaatcacaaggtcaggagtttgagagcagcctggccaacatggtaaaaccccatctctactaaaaatacaaaaaaattagctgggcatggtggcaggcacgtgtaatcccagctacttgggaggctaaggcaggagaatctcttgaacccaggaggtggaggttgcaataagctaagatcgcaccactgcattccagcccaggtgacagtgcgagactccgtctc >DB345565:1-541 (-) aagtttcgttattactaagcacataacagatttttgaattgttttaccttcctggtatatgactcggttgtcattagtaaatgtacttttctatccttgtcttgtttgtctgattttagtatagttacaccacattctttttggttgatgtttgcatagtgtatctttttcccttctttgactttaatctgtgttttcacatttaagttatatatgttataagcagcatatgatggagttgttataaaaattacattagggccgggtgcggtggctagcgtctgtaatcccagcactttgggaggccgaggcgggcggatcacagggtcaggagtttgagagcagcctggccggcatggtggagccccgtctctactaaagatgcaggaaaattggctgggcgtggtggcgggcgcgtgtagtcccagctacttgggaggctggggcgggggggtctcttgaacccgggaggtggaggttgcagtgggctaggatcgcgccactgcattccagcccgggtgacagtgcgagactccgtctc End editing Edited EST: DW466974, type: ag Aligns to: chr5:125820277-125820575 (+-) All mismatches: ag (46), ag (47), ag (57), ag (95), ag (109), ag (120), ag (135), ag (143), ag (144), ag (148), ag (192), ag (197), ag (209), ag (210), ag (229), gt (292), ag (293), Editing mismatches: 16, all mismatches: 17, alignment length: 299, cluster length: 248, total number of As: 57 Locations in RNA: 46 47 57 95 109 120 135 143 144 148 192 197 209 210 229 293 Locations in genome: 125820539 125820538 125820528 125820490 125820476 125820465 125820450 125820442 125820441 125820437 125820393 125820388 125820376 125820375 125820356 125820292 Upstream nucleotide (in genome): a a c t c c t a t t c t a c a t Upstream nucleotide summary: a: 5, c: 5, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): t a g g t g t t a g g c g a c g Downstream nucleotide summary: a: 3, c: 2, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 2, ca: 1, cc: 0, cg: 3, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 3, tt: 1, other: 0 >chr5:125820277-125820575 (+) tttttttttttttttagacagcatcttgctctatcacccaggctgctgtagtgcaataacatgatcttggctcactgcaacctctgcctcttggattcaagcgattctcgtacctcagcctcctgagtagctgggattacagacgcatgccacaatgcctagctaatttttgtatttttagtagagacagggtttcaccattttggtcaggctagtctcgaactcctgacctctagtgatccacccgcctcagcctcccaaaatgctgagattataggcttgagccaccatgcccggcc >DW466974:10-308 (-) tttttttttttttttgtacagcatcttgctctatcacccaggctgctgtagtgcaataacatgatcttggctcactgcagcctctgcctcttggattcgggcgattctcgtgcctcggcctcctgagtagctgggattacagacgcatgccacaatgcctggctggtttttgtgtttttagtagagacggggtttcaccgttttggtcaggctggtctcgaactcctgacctctagtgatccacccgcctcggcctcccaaggtgctgagattataggcttgagccaccatgcccggcc End editing Edited EST: BF591492, type: ag Aligns to: chr5:14716328-14716620 (+-) All mismatches: ag (68), ag (75), ag (86), ag (88), ag (92), ag (99), ag (100), gt (124), ag (140), ag (166), ag (169), ag (171), ag (172), ag (175), ag (182), ga (199), ag (204), ag (206), ag (221), ag (230), ag (246), ag (249), ag (267), ag (275), ag (289), Editing mismatches: 23, all mismatches: 25, alignment length: 294, cluster length: 221, total number of As: 58 Locations in RNA: 68 75 86 88 92 99 100 140 166 169 171 172 175 182 204 206 221 230 246 249 267 275 289 Locations in genome: 14716553 14716546 14716535 14716533 14716529 14716522 14716521 14716481 14716455 14716452 14716450 14716449 14716446 14716440 14716418 14716416 14716401 14716392 14716376 14716373 14716355 14716347 14716333 Upstream nucleotide (in genome): c g g c g a g t t a a a t t c a a c g g t c c Upstream nucleotide summary: a: 6, c: 6, g: 6, t: 5, other: 0 Downstream nucleotide (in genome): t g g g g c a g g t a a c a t c g g g g a c g Downstream nucleotide summary: a: 5, c: 4, g: 11, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 1, at: 1, ca: 0, cc: 1, cg: 3, ct: 2, ga: 1, gc: 0, gg: 5, gt: 0, ta: 2, tc: 1, tg: 2, tt: 0, other: 0 >chr5:14716328-14716620 (+) acgccaggtgcagtggctcacgcctgtaatcccagcactttgccgaggaggagcacttgaggccaggagttcaagaccagcctggacaacatggtgaaaccccgtctctactaaaa-atacaaaaattagttgggtatggtggtgggtgcctgtagtcccagctacttgggaggctgaacaggagaagtgcttgaacccgggaggcagaggttgcagtgagccgacattgtgctactgcattccagcctgggtgacggaatgaaactctgtctccaataaataaataaataaat >BF591492:1-294 (-) acgccgggtgcagtggctcgcgcctgtgatcccagcactttgccgggggggagcacttgaggccgggagttcaggaccagcctggacagcgtggtaaaaccccgtctctactgaaatatgcaggagttggttgggtatggtggtgggtgcctgtggtcccagctacttggtaggctgaacaggagaagtgcttgggcccggggggcgggggttgcagtgggccgacgttgtgctactgcattccagcctgggtgacggaatgaaactctgtctccaataaataaataaataaat End editing Edited EST: AA811167, type: ag Aligns to: chr5:60165870-60166246 (+-) All mismatches: gc (44), ag (78), ag (113), ag (114), ag (115), ag (118), ag (119), ag (120), ag (173), ag (176), ag (177), ag (178), ag (181), ag (185), ag (207), ag (265), ag (266), ag (270), ag (273), ag (276), ag (277), ag (278), ag (311), ag (312), ag (313), ag (316), ag (317), ag (318), Editing mismatches: 27, all mismatches: 28, alignment length: 376, cluster length: 241, total number of As: 117 Locations in RNA: 78 113 114 115 118 119 120 173 176 177 178 181 185 207 265 266 270 273 276 277 278 311 312 313 316 317 318 Locations in genome: 60166168 60166133 60166132 60166131 60166128 60166127 60166126 60166073 60166070 60166069 60166068 60166065 60166061 60166039 60165981 60165980 60165976 60165973 60165970 60165969 60165968 60165935 60165934 60165933 60165930 60165929 60165928 Upstream nucleotide (in genome): a a a a a a a a a a a a a a a a a a a a a a a a a a a Upstream nucleotide summary: a: 27, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): t c a a c a a g c a a c a a a a t t c a a c a a c a a Downstream nucleotide summary: a: 16, c: 7, g: 1, t: 3, other: 0 Dinucleotide summary: aa: 16, ac: 7, ag: 1, at: 3, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr5:60165870-60166246 (+) ttcaagtggaagcctcccatatttctccactatatttttgcaagtgcttaacaaaacaaaacaaaacaaaacaagggtttagggtggggaggggaataaaacaataatcaaaagtctcccctaattatcacagtcaggcctgaattagtaaccttgaatatcaaacacaaactctcaaagtataggacagaaacaacaaaacaagtaattattaagcacctactacatgccaactacagttctaagaattgaaacaaaacaaaacaaaaagggcaaggagaaacgaaaagataagacaatgaaagagaagtcgaagtcaggcccggcacggtggctcacgcctgtaaatcccagcactttgggaggccgaggctggt >AA811167:1-376 (-) ttcaagtggaagcctcccatatttctccactatatttttgcaagtgcttaacaaaacagggcagggcaaaacaagggtttagggtggggaggggaatagggcagtagtcaggagtctcccctaattatcacagtcaggcctgaattagtaaccttgaatatcaaacacagactctcaaagtataggacagagacagcagggcaggtaattattaagcacctactacatgccaactacagttctaagaattgaaacagggcagggcaaaaagggcaaggagaaacgaaaagataagacagtgaaagagaagtcgaagtcaggcccggcacggtcg-tcacgcctgtaaatcccagcactttgggaggccgaggctggt End editing Edited EST: DB317900, type: ag Aligns to: chr6:56945377-56945923 (+-) All mismatches: ag (222), ag (227), ag (249), ag (268), ag (294), ag (328), ag (329), ag (336), ag (345), ag (350), ag (356), ag (360), ag (405), ag (406), ag (412), Editing mismatches: 15, all mismatches: 15, alignment length: 547, cluster length: 191, total number of As: 54 Locations in RNA: 222 227 249 268 294 328 329 336 345 350 356 360 405 406 412 Locations in genome: 56945702 56945697 56945675 56945656 56945630 56945596 56945595 56945588 56945579 56945574 56945568 56945564 56945519 56945518 56945512 Upstream nucleotide (in genome): c g g t t a c a a a a c a t c Upstream nucleotide summary: a: 6, c: 4, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g g c g g a a c c a t g t a c Downstream nucleotide summary: a: 4, c: 4, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 0, at: 2, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 1, gg: 1, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 0 >chr6:56945377-56945923 (+) ttctcccttaatttctgtcagtctttgtgtcatgtattttagtgctctgttattaagtgcaaattggtgtatcttcctaatgagttaattgttttattattacaaaatgactctcaactaggtgtggtggctcacacttgtaattcctacattttgggaggctaaggtgggcagattgcttgagctcaggaatttgaaactaacctgggcaacatggcaaaaccccataactaccaaaaaatattcaattattagctgggcatggtggcatttgcctgtagtcctagtgactccagagactgaggtgggaggattgcttgagcccaggaggcagcgattgcagtgagccaacattgtgccactgcactgcagcagagtgagagaccgtgtttcaaaataaaataaaatagggagggatagcattaggagatatacctaatgctaaatgacgagttaatgggtgcggcacaccagcatggcacatgtatacatatgtaactaacctgcacattgtgcacatgtaccctaaaacttaaagtataataat >DB317900:1-547 (-) ttctcccttaatttctgtcagtctttgtgtcatgtattttagtgctctgttattaagtgcaaattggtgtatcttcctaatgagttaattgttttattattacaaaatgactctcaactaggtgtggtggctcacgcttgtggttcctacattttgggaggctaaggtgggcagattgcttgagctcgggagtttgagactagcctgggcagcatggcggaaccccataactaccaaaaaatattcaattattggctgggcatggtggcatttgcctgtggtcctagtgactccagaggctgaggtgggaggattgcttgggcccgggaggcagcgattgcagtgagccaacattgtgccactgcactgcagcagagtgagagaccgtgtttcaaaataaaataaaatagggagggatagcattaggagatatacctaatgctaaatgacgagttaatgggtgcggcacaccagcatggcacatgtatacatatgtaactaacctgcacattgtgcacatgtaccctaaaacttaaagtataataat End editing Edited EST: DB331875, type: ag Aligns to: chr6:151721918-151722307 (+-) All mismatches: ag (10), ag (11), ag (12), ag (13), ag (59), ag (79), ag (88), ag (94), ag (139), ag (147), ag (161), ag (163), ag (166), ag (177), ag (179), ag (183), ag (187), ag (203), ag (208), ag (211), ac (248), ag (257), ag (265), ac (369), Editing mismatches: 22, all mismatches: 24, alignment length: 390, cluster length: 256, total number of As: 65 Locations in RNA: 10 11 12 13 59 79 88 94 139 147 161 163 166 177 179 183 187 203 208 211 257 265 Locations in genome: 151722298 151722297 151722296 151722295 151722249 151722229 151722220 151722214 151722169 151722161 151722147 151722145 151722142 151722131 151722129 151722125 151722121 151722105 151722100 151722097 151722051 151722043 Upstream nucleotide (in genome): a a a c c a a c c t a t t a g t a c g c t c Upstream nucleotide summary: a: 8, c: 7, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): c a a a g c t g t g a a c c a g c a g g a c Downstream nucleotide summary: a: 8, c: 6, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 4, ag: 0, at: 1, ca: 2, cc: 1, cg: 3, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 2, tt: 0, other: 0 >chr6:151721918-151722307 (+) cagtctaggggatgtggaaagattttgttttaaaaacgtttaaaagtccacgttttgtttgatattgttcagaggaagtgaaaatgtggtctttaaaaaattttgttgcccgggtgtggtgactcacgcctgtaatcccagcactttgggaggctgaggcgggtggatcacctgaggtcaggagttcaagaccagcctggccaacatagtgaaaccccgcctctactaaaaatatcaaaaattagctgggcatgggggtgggcacctgtaatcccagctgctcgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagcggagatcgcgccattgcactccagcctgggccacagagcaaaactctgtctt >DB331875:1-390 (-) cagtctnggggatgtggaaagcttttgttttaaaaacgtttaaaagtccacgttttgtttgatattgttcagaggaagtgaaaatgtggtctttaaaaaattttgttgcccgggtgtggtgactcgcgcctgtgatcccagccctttgggaggctgaggcgggtggatcacctgaggtcgggggttcgagaccagcctggccagcatggtggagccccgcctctgctgagaatatcaaaaattggctgggcgtgggggtgggcacctgtaatcccagctgctcgggaggctgaggcgggagagtcgcttgagcccgggaggcggaggttgcggtgagcggagatcgcgccattgcactccagcctgggccacagagcggggctctgtctt End editing Edited EST: DB334518, type: ag Aligns to: chr6:159140893-159141438 (+-) All mismatches: ag (59), ag (75), ag (78), ag (82), ag (83), ag (113), ag (120), ag (121), ag (126), ag (127), ag (148), ag (161), ct (177), ag (182), ag (183), ag (196), ag (215), ag (220), ag (237), ag (255), ag (261), ag (334), ag (336), ag (393), ag (398), ag (433), ag (441), ag (495), Editing mismatches: 27, all mismatches: 28, alignment length: 546, cluster length: 437, total number of As: 126 Locations in RNA: 59 75 78 82 83 113 120 121 126 127 148 161 182 183 196 215 220 237 255 261 334 336 393 398 433 441 495 Locations in genome: 159141380 159141364 159141361 159141357 159141356 159141326 159141319 159141318 159141313 159141312 159141291 159141278 159141257 159141256 159141243 159141224 159141219 159141202 159141184 159141178 159141105 159141103 159141046 159141041 159141006 159140998 159140944 Upstream nucleotide (in genome): t g t a g c a c a t c t a a t c g a c t g c c g c t a Upstream nucleotide summary: a: 7, c: 8, g: 5, t: 7, other: 0 Downstream nucleotide (in genome): a g g c a g c a t a g c a a g g g g g a g g g g g t a Downstream nucleotide summary: a: 8, c: 3, g: 14, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 1, at: 1, ca: 1, cc: 0, cg: 7, ct: 0, ga: 1, gc: 0, gg: 4, gt: 0, ta: 3, tc: 1, tg: 2, tt: 1, other: 0 >chr6:159140893-159141438 (+) gggcagattgcttgagccaaggagttggagaccagcctgggcaacatgagaaaaccctgtctctacaaaaatacaaatattagccgggtgtggtgtcacatgtctataatcccagctactagggagactgaggtgggaggatcgcttgagcccaggaggtcaaggctgcagtgagccatggttgcaccactgcactccagcctgggtgacagagtgaaaccctgtctcaaataataataaattaaaaattttaaaaattggccgggcaccatggctcatgcctgtaatcccagcactctgggaggctgaagtgggtggatcacctgagttcaggcgttcgagagcagcctagccaacatggtaaaaccccgtctctactaaaaatacacaaattagccaggctcatggcgggtgcctgtaatcccaactactcaggaggccgaggcaggagaatctttgcttgaacctaggaggcagagattgcagtaagccgggatcgtactgttatacgctccagcctgggtgacaagagtgaaactttgtctc >DB334518:1-546 (-) gggcagattgcttgagccaaggagttggagaccagcctgggcaacatgagagaaccctgtctctacaaaaatacaaatattagccgggtgtggtgtcacatgtctgtaatcccggctactagggagactgaggtgggaggatcgcttgggcccgggaggtcaaggctgcagtgagccatggttgcaccactgcactccagcctgggtgacggggtgaaaccctgtctcaaataataataaattaaaaattttaaaaattggccgggcaccatggctcatgcctgtgatcccggcactctgggaggctgaggtgggtggatcacctgggttcgggcgttcgagagcagcctggccaacatggtaggaccctgtctctactaaaaatgcacaaattagccgggctcatggcgggtgcctgtggtcccggctactcgggaggccgaggcaggagaatctttgcttgggcctggggggcagagattgcagtgagccgggatcgtactgttatacgctccagcctgggtgacaagagtgaaactttgtctc End editing Edited EST: BU165725, type: ag Aligns to: chr6:31875619-31875917 (+-) All mismatches: ag (15), ag (110), ag (139), ag (155), ag (161), ag (165), ag (190), ag (194), ag (195), tc (206), ag (230), ag (233), ag (270), ag (274), Editing mismatches: 13, all mismatches: 14, alignment length: 301, cluster length: 260, total number of As: 52 Locations in RNA: 15 110 139 155 161 165 190 194 195 230 233 270 274 Locations in genome: 31875903 31875808 31875779 31875763 31875757 31875753 31875728 31875724 31875723 31875688 31875685 31875648 31875644 Upstream nucleotide (in genome): c t c t t t a a c a t g g Upstream nucleotide summary: a: 3, c: 3, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): t g c c g g t g a t c g t Downstream nucleotide summary: a: 1, c: 3, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 2, ca: 1, cc: 1, cg: 0, ct: 1, ga: 0, gc: 0, gg: 1, gt: 1, ta: 0, tc: 2, tg: 3, tt: 0, other: 0 >chr6:31875619-31875917 (+) tttttttttttttttttttttt--gagatggagtttcgcccttgttgcccaggctggagtgcaatggtacaatctcagctcactgcaacctctgcttcccaggttcaagcaattctcctgcctcagcctcctgagtagctaggattacggacgtctgccaccacgcccagctaatgttttgtatttttagtagagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcatgatccgcccacctcagcctcccaaagtgctgggattacaggcatgagccgcagcacc >BU165725:1-301 (-) ttttttttttttttttttttttnngaggtggggtttcgcccttgttgcccaggctggagtgcaatggtgcagtctcagctcactgcaacctctgcctcccaggttcgggcagttctcctgcctcagcctcctgagtggctgggattgcggacgtctgccaccgcgcccagctaatgttttgtatttttagtggagatggggtttcaccatgttggccaggctggtcttgaactcctgacctcatgatccgcccacctcagcctcccaaagtgctgggattacaggcgtgagccgcagcacc End editing Edited EST: BE677338, type: ag Aligns to: chr6:69817497-69817941 (+-) All mismatches: ag (269), ag (291), ag (293), ag (308), ag (325), ag (333), ag (360), ag (362), ag (364), ag (375), ag (376), ag (380), ag (382), ag (397), ag (425), ag (430), Editing mismatches: 16, all mismatches: 16, alignment length: 445, cluster length: 162, total number of As: 62 Locations in RNA: 269 291 293 308 325 333 360 362 364 375 376 380 382 397 425 430 Locations in genome: 69817673 69817651 69817649 69817634 69817617 69817609 69817582 69817580 69817578 69817567 69817566 69817562 69817560 69817545 69817517 69817512 Upstream nucleotide (in genome): t g t c a a c t t a a a t c a t Upstream nucleotide summary: a: 6, c: 3, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): a g g a t g c c t t a g a g g a Downstream nucleotide summary: a: 5, c: 2, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 3, at: 2, ca: 1, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 3, tc: 1, tg: 1, tt: 1, other: 0 >chr6:69817497-69817941 (+) agcattagtcacaataacaaagacaagcagtcaacctaggtgcccatcagtggtggattggataaagaaaatgtggtacatatacaccatggaatactacatagccataaaaagaatgaaatcatgtcccttgtagcaatgtggatgcagctagaggccactatcctaagtaaattaacacaggaaaagaaaaccaaatactgcaagttatcacttataagtgggagctaaacattcggtactcagggatataaagatggcaacagtagacacttgagactactagaagggagagggagggagggggcaagcgttgaaaaaccaactactgaggactgcgctcagtacctgggatcattcataccccaaacctcagtaccatgcaatgaatctagataacaaacctgcacatgtccccaccttccgaatctaaaataaaaattga >BE677338:1-445 (-) agcattagtcacaatgacaaggacaagcagtcaacntaggtgcccatcggtggtggattggatgaggaaggtgtggtacatgtgcgccatggaatactacatagccataaaaggaatgaagtcatgtcccttgtagcgatgtggatgcagctgggggccactatcctaagtaaattgacacaggaaaagaaaaccaaatactgcaagttatcacttataagtgggagctaaacattcggtactcagggatataaagatggcaacagtagacacttgagactactagaagggagagggagggagggggcaagcgttgaaaaaccaactactgaggactgcgctcagtacctgggatcattcataccccaaacctcagtaccatgcaatgaatctagataacaaacctgcacatgtccccaccttccgaatctaaaataaaaattga End editing Edited EST: AI160732, type: ag Aligns to: chr6:26095291-26095743 (+-) All mismatches: at (15), ag (49), ag (56), ag (71), ct (83), ag (86), ag (99), ag (103), ag (106), ag (111), ag (114), ag (119), ag (129), ag (136), ag (146), ag (152), ag (160), ag (162), ag (178), ag (182), ag (186), ag (191), ag (192), ag (197), ag (203), ag (228), ag (231), ag (233), ag (250), ag (262), ag (263), ag (264), ag (269), ag (280), ag (285), ag (286), ag (294), Editing mismatches: 35, all mismatches: 37, alignment length: 453, cluster length: 246, total number of As: 68 Locations in RNA: 49 56 71 86 99 103 106 111 114 119 129 136 146 152 160 162 178 182 186 191 192 197 203 228 231 233 250 262 263 264 269 280 285 286 294 Locations in genome: 26095699 26095692 26095677 26095662 26095649 26095645 26095642 26095637 26095634 26095629 26095619 26095612 26095602 26095596 26095588 26095586 26095570 26095566 26095562 26095557 26095556 26095551 26095545 26095520 26095517 26095515 26095498 26095486 26095485 26095484 26095479 26095468 26095463 26095462 26095454 Upstream nucleotide (in genome): c t c g c g c g c a g g c t g c t a c a a t c c g g c a a c g c a t c Upstream nucleotide summary: a: 7, c: 14, g: 9, t: 5, other: 0 Downstream nucleotide (in genome): g g c g g g g a t t g a g g c g g a a a a a t t c g c g a a g g t a c Downstream nucleotide summary: a: 10, c: 5, g: 15, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 1, at: 2, ca: 2, cc: 3, cg: 6, ct: 3, ga: 2, gc: 2, gg: 5, gt: 0, ta: 2, tc: 0, tg: 3, tt: 0, other: 0 >chr6:26095291-26095743 (+) atgataaggatgataaaagcacttacttcgtgtccgactcttctgagcacctacttacatgcattactgcatgcacttcttacaataattctatgagataggtactattatccccatttcttttttaaatgaagaaagtgaagtaggccgggcacggtggctcacgcctgtaatcccagcactttgggaggccaaagcgggtggatcacgaggtcaggagatcgagaccatcctggctaacatggtgaaaccccatctctaataaaaatacaaaaaattagctgggcgtggtggcagacgcctgtagtcccagctactcggaaggctgaggcaggagaatggcatgaacccaggaggcagagcttgcagtgagccgagtttgcgccactgcactccagcctaggtgacagagtgagactccatctcaaaaaaataaaaataaaaataaaaaaa >AI160732:5-457 (-) atgataaggatgataaaagcacttacttcgtgtccgactcttctgagcacctacttacatgcattactgcatgcacttcttacaataattctatgagataggtactattatccccatttcttttttaaatgaagaaagtgaagtaggccgggcacggtggctcgcgcctgtggtcccggcactttggggggccggggcgggtggatcgcgaggtcaggagatcggggccgtcctggctaacatggtgaaaccccgtctctgataaggatacgaaagattggctgggcgtggtggcgggcgcctgtggtcccggctactcgggaggctggggcaggagagtggcgtggacccggggggcggagcttgcagtgggctgagtttgcgccgctgcactccagcctgggtgacggagtgagactccatctcaaaaaaataaaaataataataaaaaaa End editing Edited EST: DB351887, type: ag Aligns to: chr7:66173854-66174242 (+-) All mismatches: ga (141), ag (147), ag (163), ag (164), ag (176), ag (188), ag (199), ag (202), ag (205), ag (240), ag (246), ag (259), ag (260), ag (273), ag (276), ag (277), ag (296), ag (299), ag (302), ag (312), ag (313), ag (315), ag (320), ag (328), ag (333), ag (342), ag (346), ag (354), Editing mismatches: 27, all mismatches: 28, alignment length: 390, cluster length: 209, total number of As: 48 Locations in RNA: 147 163 164 176 188 199 202 205 240 246 259 260 273 276 277 296 299 302 312 313 315 320 328 333 342 346 354 Locations in genome: 66174235 66174218 66174217 66174205 66174193 66174182 66174179 66174176 66174141 66174135 66174122 66174121 66174108 66174105 66174104 66174085 66174082 66174079 66174069 66174068 66174066 66174061 66174053 66174048 66174039 66174035 66174027 Upstream nucleotide (in genome): g a g c c a t t c t a c c a c a t c a c c a t c c c a Upstream nucleotide summary: a: 8, c: 12, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): t a a g c a g g c c g a a g a c c c t a c t g g t c g Downstream nucleotide summary: a: 7, c: 8, g: 8, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 3, at: 2, ca: 4, cc: 5, cg: 2, ct: 1, ga: 1, gc: 0, gg: 0, gt: 1, ta: 0, tc: 2, tg: 3, tt: 0, other: 0 >chr7:66173854-66174242 (+) agccaaattgttatttatcatgaaatttgtgatgggagggggatagggaaaaaaagaaatatgcaatatgccttctttcagtcttttttttctttcctgttatgcctctctacttgattctgcatcagtagtatgaccttattttaattttttttttttgttttggtgagacaagagtttcactcatgtcgcccaggctagagcgcaatggcacaatctcggctcactacaacctctgccttctgggttcaagcaattctcctgcccaagtagctgggattacaggcacccaccaccatgcccggctaatttttgtatttttagtagaaatggagtttcaccatgttgttcaggctggtctcgaaatcctgacctcaggtgat-c-tgcct >DB351887:138-527 (-) agccaaattgttatttatcatgaaatttgtgatgggagggggatagggaaaaaaagaaatatgcaatatgccttctttcagtcttttttttctttcctgttatgcctctctacttgattctgcatcagtagtatgaccttattttaattttttttttttgttttggtgagacaggagtttcgctcgtgtcgcccgggctggagcgcagtggcgcggtctcggctcgctgcagcctctgccttctgggttcgggcgattctcctgcccgggtagctgggattgcaggcgcccaccaccatgcccggctaatttttgtatttttggtggagatggagtttcgccatgttgttcgggctggtctcgggatcctgacctcag-tggttcatacct End editing Edited EST: DB334911, type: ag Aligns to: chr7:33555561-33556099 (+-) All mismatches: ag (42), ag (78), ag (110), ag (130), ag (150), ag (157), ag (160), ag (170), ag (195), ag (209), ag (214), ag (252), ag (253), ag (259), ag (261), Editing mismatches: 15, all mismatches: 15, alignment length: 539, cluster length: 220, total number of As: 61 Locations in RNA: 42 78 110 130 150 157 160 170 195 209 214 252 253 259 261 Locations in genome: 33556058 33556022 33555990 33555970 33555950 33555943 33555940 33555930 33555905 33555891 33555886 33555848 33555847 33555841 33555839 Upstream nucleotide (in genome): c a t c a a a c c c g a t c c Upstream nucleotide summary: a: 5, c: 7, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): c c c g a t a t g g g t a c c Downstream nucleotide summary: a: 3, c: 5, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 2, ca: 0, cc: 3, cg: 3, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr7:33555561-33556099 (+) tgctcaatgataagtcatggtgtggttttaaaagataatttaaatggtaattaattcattgaggagtattaacattgcacacaagtcagtggacgtgacataatatgaactgctaagataaaggctgtacatgctcaggcaatgaaaactatagcatgaccggaacctgaaagccagaagttattatatgccactgagtataagacacaaccctacttctgagatgtgggggagaaatgtcctataattgatggaacataggccgggcgcggtggctcacacctgtaatcccagcactttgggaggctgtggcgggtagatcatgaggtcaggagttcaagaccagcctggccaagatggtgaaaccccatctttactaaaaatacaaaaattggcctggtgcggtggcaggcacctgtaatcccagctacttgggaggctgaggcaggagaatcactggaacccgggaggcagaggttgcagtgagctaaaattgcaccactgcactccagcctgggcagcagagcaatttcatctcc >DB334911:1-539 (-) tgctcaatgataagtcatggtgtggttttaaaagataatttaaatggtaattaattcattgaggagtattaacattgcacacaagtcagtggacgtgacataatatgaactgctaagataaaggctgtacatgctcaggcaatgaaaactatagcatgaccggaacctgaaagccagaagttattatatgccactgagtataagacacaaccctacttctgagatgtgggggagaaatgtcctataattgatggaacataggccgggcgcggtggctcgcgcctgtggtcccagcactttgggaggctgtggcgggtagatcatggggtcgggagttcaagaccggcctggccaagatggtgaaaccccgtctttactagaagtacaaagattggcctggtgcggtggcgggcacctgtaatcccagctgcttgggaggctgaggcaggagaatcactggagcccgggaggcagaggttgcagtgagctaaaattgcgccactgcactccagcctgggcagcagagcaatttcatctcc End editing Edited EST: DW408963, type: ag Aligns to: chr7:4724852-4725152 (+-) All mismatches: ag (55), ag (65), ag (105), ag (110), ag (118), ag (132), ag (135), ag (141), ag (177), ag (199), ag (217), ag (280), tc (288), Editing mismatches: 12, all mismatches: 13, alignment length: 303, cluster length: 226, total number of As: 44 Locations in RNA: 55 65 105 110 118 132 135 141 177 199 217 280 Locations in genome: 4725107 4725097 4725057 4725052 4725044 4725030 4725027 4725021 4724985 4724963 4724945 4724882 Upstream nucleotide (in genome): a t a t c t t t t c c g Upstream nucleotide summary: a: 2, c: 3, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): g g g g c g g t c g a g Downstream nucleotide summary: a: 1, c: 2, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 1, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 4, tt: 1, other: 0 >chr7:4724852-4725152 (+) ctttt-tttttt-ttttttttttctgtcatggagtctcgctctgttgtccagactggagtgcagtggctcactgcaaactctacctcccgggttcaagagattctcctgcctcagcctcctgagtggctgggactacaggcgcacaacaccacgcccagctaattctttgtatttttagtagagatggggtttcaccgtgttagccaagatggtctcgatctcctgacctcgtgatctgcctgccttagcttcccaaagtgctgggattacaggcatacaggcgtgagcccctgcgcccggcc >DW408963:10-312 (-) cttttattttttcttttttttttccgtcatggggtctcgctctgttgtccagactggagtgcagtggctcactgcaaactctacctcccgggttcgagagattctcctgcctcggcctcctgagtggctgggactgcaggcgcacaacaccacgcccagctaattctttgtgtttttggtggagatggggtttcgccgtgttggccaggatggtctcgatctcctgacctcgtgatctgcctgccttggcttcccaaggtgctgggattacaggcatacaggcgtgagcccctgcgcccggcc End editing Edited EST: DW424961, type: ag Aligns to: chr7:4724880-4725152 (+-) All mismatches: ag (55), ag (65), ga (70), ag (103), ag (108), ag (116), ag (130), ag (133), ag (139), ag (149), ag (175), ag (197), ag (240), ag (278), Editing mismatches: 13, all mismatches: 14, alignment length: 271, cluster length: 226, total number of As: 44 Locations in RNA: 55 65 103 108 116 130 133 139 149 175 197 240 278 Locations in genome: 4725107 4725097 4725057 4725052 4725044 4725030 4725027 4725021 4725011 4724985 4724963 4724920 4724882 Upstream nucleotide (in genome): a t a t c t t t t t c c g Upstream nucleotide summary: a: 2, c: 3, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): g g g g c g g t a c g c g Downstream nucleotide summary: a: 1, c: 3, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 0, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 4, tt: 1, other: 0 >chr7:4724880-4725152 (+) ggagtctcgctctgttgtccagactggagtgcagtggctcactgcaaactctacctcccgggttcaagagattctcctgcctcagcctcctgagtggctgggactacaggcgcacaacaccacgcccagctaattctttgtatttttagtagagatggggtttcaccgtgttagccaagatggtctcgatctcctgacctcgtgatctgcctgccttagcttcccaaagtgctgggattacaggcatacaggcgtgagcccctgcgcccggcc >DW424961:10-280 (-) ggggtctcgctctgttgtccagactggagtgcagtggctcgctgcaaactctacctcccgggttcaagagattctcctgcctcggcctcctgagtggctgggactgcaggcgcacaacaccacgcccagctgattctttgtgtttttggtggagatggggtttcgccgtgttggccaggatggtctcgatctcctgacctcgtgatctgc--accttggcttcccaaggtgctgggattacaggcatacaggcgtgagcccctgcgcccggcc End editing Edited EST: BM672728, type: ag Aligns to: chr7:66152723-66153090 (+-) All mismatches: ag (59), ag (67), ag (94), ag (98), ag (99), ag (123), ag (139), ag (140), ag (170), ag (194), ag (204), ag (214), ag (220), ag (233), Editing mismatches: 14, all mismatches: 14, alignment length: 368, cluster length: 175, total number of As: 50 Locations in RNA: 59 67 94 98 99 123 139 140 170 194 204 214 220 233 Locations in genome: 66153032 66153024 66152997 66152993 66152992 66152968 66152952 66152951 66152921 66152897 66152887 66152877 66152871 66152858 Upstream nucleotide (in genome): t g c a g t a t a a a c c g Upstream nucleotide summary: a: 5, c: 3, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): t t g c a g t a a c c g a g Downstream nucleotide summary: a: 4, c: 3, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 0, at: 1, ca: 1, cc: 0, cg: 2, ct: 0, ga: 1, gc: 0, gg: 1, gt: 1, ta: 1, tc: 0, tg: 1, tt: 1, other: 0 >chr7:66152723-66153090 (+) caaagacacaatgagattgaaaacaaaagaatgaagaaatgaattccatgcaaaaagtaaccaaatgaggccaggcttagtgactcatgcctgtaatcccagcactctgggaggctgaggcgggcagatcccttgaggtcgggagttcaagaccagcctgaccaacatggagaaaccctgtctgtactaaaaatacaaaattagccaggcgtggtggtgcatgcctgtaatcccagctacacggtaggctgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgagctgagatcgtgttattgcactccagcctgggcaacaagagtgaaactctgtgtcaaaaaaaaaaaaaaaaaa >BM672728:1-368 (-) caaagacacaatgagattgaaaacaaaagaatgaagaaatgaattccatgcaaaaagtaaccaaatgaggccaggcttagtgactcatgcctgtaatcccagcactctgggaggctgaggcgggcagatcccttggggtcgggagttcgagaccggcctgaccagcatggagaagccctgtctgtactaaaaatacaagattagccaggcgtggtggtgcatgcctgtggtcccagctacacggtgggctgaggcaggagaatcgcttgggcccgggaggcagaggttgcagtgagctgaggtcgtgttgttgcactccagcctgggcaacaagagtgaaactctgtgtcaaaaaaaaaaaaaaaaaa End editing Edited EST: BU623816, type: ag Aligns to: chr7:90184867-90185616 (+-) All mismatches: ag (233), ag (244), ag (254), ag (255), ag (261), ag (277), ag (281), ag (282), ag (283), ag (365), ag (384), ag (389), ag (391), ag (404), ag (407), ag (420), ag (452), ag (476), ag (513), ag (519), ag (523), ag (524), ag (531), ag (540), ag (573), ag (591), ag (594), ag (595), ag (612), ag (616), ag (617), ag (636), ag (638), ag (651), ag (652), ag (653), ag (673), ag (674), ag (676), ag (677), ag (689), ag (690), ag (692), ag (703), ag (706), Editing mismatches: 45, all mismatches: 45, alignment length: 748, cluster length: 475, total number of As: 177 Locations in RNA: 233 244 254 255 261 277 281 282 283 365 384 389 391 404 407 420 452 476 513 519 523 524 531 540 573 591 594 595 612 616 617 636 638 651 652 653 673 674 676 677 689 690 692 703 706 Locations in genome: 90185397 90185386 90185376 90185375 90185369 90185353 90185349 90185348 90185347 90185265 90185246 90185241 90185239 90185226 90185223 90185210 90185178 90185154 90185117 90185111 90185107 90185106 90185099 90185090 90185057 90185039 90185036 90185035 90185018 90185014 90185013 90184994 90184992 90184979 90184978 90184977 90184957 90184956 90184954 90184953 90184941 90184940 90184938 90184926 90184923 Upstream nucleotide (in genome): t t a t c a a a a t a t t a a g a c a a a a t t a c a a t a t t t a a a a c a c a a t a c Upstream nucleotide summary: a: 25, c: 6, g: 1, t: 13, other: 0 Downstream nucleotide (in genome): c a g a c a c a a a g c t a g t g t t a g a t c g g g a g a a c t a a a a a c a a a a t g Downstream nucleotide summary: a: 21, c: 7, g: 10, t: 7, other: 0 Dinucleotide summary: aa: 14, ac: 2, ag: 7, at: 2, ca: 2, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 5, tc: 4, tg: 1, tt: 3, other: 0 >chr7:90184867-90185616 (+) catcagcattaatcagcaaaacacaaatcaaaatgcaaatcaaaaccacaacaatcagaatggctgtttttaaaaagtcaaaaaacaacaaatgcttgcaaggctgtggaaaaaggggaatgcttatacactgttggtgggaatgtaaattagttcagccactgtggaaagcagtttggagatttctcaaagaactcaaaacagagcttccattcaacccattactgggtctatatccaaaggaaaataaatcattctaccagatagacacatgcatttttatgttcattgcggcatttttcacagtagcaagacaagaaatcaatctagatgcccatcaatgatggattgtataaagaaaatgtgttgcatatacacaaggaatattacacagccataaaaagaatgaaatcaagtcctctgcagcaacatggatgcagctggaagctattatcctaagcaaattaattccggaacagaaaaccaaatattgcatgttctcacttataagttggagctaaacactgggtacacatggatgtaaagacggcagcaatagacactggggactactagaggtgggaaggaaggggacaagggttcaaagactattggctactaagcttactatctgggtgatgggatcaatcatgccacaaacctcagcatcacacgatacagccatgtaacaaacctgcacatgtgtcacctgaatctaaaataaaatttgatattattaaaaagtaaaaa >BU623816:14-761 (-) catcagca-taatcagcaaaacacaaatcaaaatgcaaatcaaaaccacaacaatcggagt-gctgtttntgaggagtcaaaaaacggcggatgcttgcaaggctgtggagggaggggaatgcttgtgcactgttggtgggaatgtggattggttcagccactgtggagggcggtttggagatttctcaaggaactcaaaacagagcttccattcaacccattgctgggtctgtatccaggggagaataagtcattctaccagatagacacatgcatttttatgttcgttgcggcatttttcacagtagcaggacaagaaatcaatctagatgcccatcaatggtggattgtataaggagaatgtgttgcatgtgcacagggaatattacacagccatgaaaagaatgaaatcaagtcctctgcagcaacatggatgcagctggaagctattatcctaagcaaattaattccggaacagagggccagatattgcatgttctcgcttatgggttggagctgaacactgggtgcacatggatgtaaagacggcagcaatagacactggggactactagaggtgggaaggaaggggacaagggttcaaagactattggctactaagcttactatctgggtgatgggatcaatcatgccacaaacctcagcatcacacgatacagccatgtaacaaacctgcacatgtgtcacctgaatctaaaataaaatttgatattattaaaaagtaaaaa End editing Edited EST: BJ994492, type: ag Aligns to: chr8:121064826-121065237 (+-) All mismatches: ag (58), ag (71), ag (123), ag (180), ag (182), ag (210), ag (236), ag (242), ag (259), ag (260), ag (262), ag (276), tc (287), Editing mismatches: 12, all mismatches: 13, alignment length: 412, cluster length: 219, total number of As: 58 Locations in RNA: 58 71 123 180 182 210 236 242 259 260 262 276 Locations in genome: 121065180 121065167 121065115 121065058 121065056 121065028 121065002 121064996 121064979 121064978 121064976 121064962 Upstream nucleotide (in genome): g c a a g a a a a t t c Upstream nucleotide summary: a: 6, c: 2, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): g g t c a t g g t a t g Downstream nucleotide summary: a: 2, c: 1, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 3, ca: 0, cc: 0, cg: 2, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 0, tt: 1, other: 0 >chr8:121064826-121065237 (+) agaatcgcttgaacttacaaggtggaggctgcagtgagccaagatagtgccattgcactccagcctgggcaacagagcgagactccaactcaaaaaaataaataagtaaataaaaaataaaaacctggccaggcacagtggctcacgcctataatcccagcactttgggaagccgaagcgggtggatcacttgaggtcaggaatttgagaccagcctggccaacagggtgaaaccccgtctctactaaaaacacaaaaaattagctgggcgtggtggtgcacgcccgtaattccagctacttgggaggctgaggtgggagaattgcttgaacccaggaggcagaggctgcagtgagccgagattgtgccacttcactccagcctgggcgacagagtgagactctgtctcaaa >BJ994492:1-412 (-) agaatcgcttgaacttacaaggtggaggctgcagtgagccaagatagtgccattgcactccagcctgggcaacagagcgagactccaactcaaaaaaataaataagtaaataaaaaataaaaacccggccaggcacggtggctcacgcctgtggtcccagcactttgggaggccgaggcgggtggatcacttgaggtcaggagtttgagaccagcctggccaacagggtggagccccgtctctactaaaaacacaaaaaattagctgggcgtggtggtgcacgcccgtagttccagctacttgggaggctgaggtgggagaattgcttgaacccaggaggcggaggctgcagtgggccgagattgtgccacttcactccagcctgggcgacagagtgagactctgtctcaaa End editing Edited EST: BE677030, type: ag Aligns to: chr8:105090075-105090396 (+-) All mismatches: ag (59), ag (104), ag (116), ag (119), ag (129), ag (136), ag (145), ag (146), ag (187), ag (236), ag (255), ag (260), ag (276), ag (281), gc (297), Editing mismatches: 14, all mismatches: 15, alignment length: 322, cluster length: 223, total number of As: 60 Locations in RNA: 59 104 116 119 129 136 145 146 187 236 255 260 276 281 Locations in genome: 105090338 105090293 105090281 105090278 105090268 105090261 105090252 105090251 105090210 105090161 105090142 105090137 105090121 105090116 Upstream nucleotide (in genome): a a a c a t a t a c c c c a Upstream nucleotide summary: a: 7, c: 5, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): c c g g g g t a a g g a g t Downstream nucleotide summary: a: 3, c: 2, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 2, at: 2, ca: 1, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr8:105090075-105090396 (+) aaaaacttggtggtggccgggcacggtggctcacgcccgtaatcccagcacttcgggaggccaaggcaggtggattgcctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaataccaaaaattacctgggtgtggtggctggtgcctgtaatcccagctagttagaaggctgaggcagaagaatctcttgaacccgggaggcagaggttgcaatgagccgagatcgctgcactccaacctgggcaacaagagcaagactccatctcaaaaacaaacaaaaaaaacaaaccaaaaa >BE677030:1-322 (-) aaaaacttggtggtggccgggcacgctggctcacgcccgtagtcccggcacttcgggaggccgaggcgggtggattgcctgaggtcgggagtttgagaccagcctggccaacatggtgaaaccccatctctactagaaataccaaaaattacctgggtgtggtggctggtgcctgtggtcccagctggttagagggctgaggcggaggaatctcttgagcccgggaggcagaggttgcaatgagccgagatcgctgcactccagcctgggcaacaagagcaagactccatctcaaaaacaaacaaaaaaaacaaaccaaaaa End editing Edited EST: AA013247, type: ag Aligns to: chr8:12046490-12046812 (+-) All mismatches: ga (2), ag (124), ag (128), ag (131), ag (154), ag (162), ag (198), ag (201), ag (202), ag (207), ag (208), ag (231), ag (232), ag (239), ag (241), ag (314), ag (322), Editing mismatches: 16, all mismatches: 17, alignment length: 325, cluster length: 196, total number of As: 55 Locations in RNA: 124 128 131 154 162 198 201 202 207 208 231 232 239 241 314 322 Locations in genome: 12046688 12046684 12046681 12046658 12046650 12046614 12046611 12046610 12046605 12046604 12046581 12046580 12046573 12046571 12046501 12046493 Upstream nucleotide (in genome): c g c t t c a t a a a a c a t c Upstream nucleotide summary: a: 6, c: 5, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g g g g g g c a a a c a t c a t Downstream nucleotide summary: a: 5, c: 3, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 0, at: 0, ca: 0, cc: 0, cg: 3, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 0, tg: 2, tt: 0, other: 0 >chr8:12046490-12046812 (+) ctcatgcctgtaat-cccagcac-tttgggaggccgaggcagacggatcacctgaggtcaggagttcgagatgagcc-tggccaacatggtgaaactctgtctctactaaaaatacaaaaactaaccagacatggtggcatgtgcctgtagtcccagcttcttagcaggctaggcacgagaactgcttgaacccaggaggcagaggtttcagtgagccgagattgtgccacagtaatccagcctgggcaacacagtgagactctgtctcaaaaaaaatatataaataaataaataaataaataaataaataaataaataaataagt >AA013247:1-325 (-) ctcgtgcctgtgatccccagcacttttgggaggccgaggcagacggatcacctgaggtcaggagttcgagatgagccttggccagcgtggtgaggctctgtctctactaaaaatacaggaactggccggacatggtggcatgtgcctgtagtcccagcttcttggcaggctgggcacgagaactgcttgaacccggggggcggaggtttcagtgagccgagattgtgccacagtaatccagcctgggcaacacagtgagactctgtctcaaaaaaaatatataaataaataaataaataaataaataaataaataaataaa-aaat End editing Edited EST: AI673580, type: ag Aligns to: chr8:8832614-8832975 (+-) All mismatches: ag (51), ag (56), ag (60), ag (81), ag (92), ag (95), ag (99), ag (121), ag (122), ag (144), ag (148), ag (157), ag (160), ag (166), ag (177), ag (263), Editing mismatches: 16, all mismatches: 16, alignment length: 362, cluster length: 213, total number of As: 58 Locations in RNA: 51 56 60 81 92 95 99 121 122 144 148 157 160 166 177 263 Locations in genome: 8832925 8832920 8832916 8832895 8832884 8832881 8832877 8832855 8832854 8832832 8832828 8832819 8832816 8832810 8832799 8832713 Upstream nucleotide (in genome): g g c g g c g a t c t t a t a t Upstream nucleotide summary: a: 3, c: 3, g: 5, t: 5, other: 0 Downstream nucleotide (in genome): g g g a g g g t a g g c a c c t Downstream nucleotide summary: a: 3, c: 3, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 1, ca: 0, cc: 0, cg: 3, ct: 0, ga: 1, gc: 0, gg: 4, gt: 0, ta: 1, tc: 2, tg: 1, tt: 1, other: 0 >chr8:8832614-8832975 (+) cagctaggtgtggccatccagctaagttttcatcagtgaattgtgagaggaaataatgcacgaaattttgatttcagccgggctcagtggctcacgcctatgatcccaacactttgggaggctgaagctggcaggtggatcacttgagctcaagacttcaagatcagtctgtccaacatggtgaaaccccatctctactacaaatacaaaaattagccaggcgtggtggcacacgcctgtaatcccagctactggggaggctgaggcaggagattcacttgaacccgggaggtggaggtggcagtgagccgagatcactctactgcactccagcctgggcaacaaagtgagactccatctca >AI673580:1-362 (-) cagctaggtgtggccatccagctaagttttcatcagtgaattgtgagaggaaataatgcacgaanttttgatttcagccgggctcagtggctcacgcctgtgatcccaacactttgggaggctgaagctggcaggtggatcacttgagctcaagacttcaagatcagtctgtccaacatggtgaagccccatctctgctacagatgcaaaaattggccgggcgtggtggcacacgcctgtggtcccagctactggggaggctggggcgggggattcacttggacccgggaggtggaggtggcggtgggccgggatcactctactgcactccagcctgggcaacaaagtgagactccatctca End editing Edited EST: AI682353, type: ag Aligns to: chr8:42987560-42987877 (+-) All mismatches: ag (118), ag (132), ag (134), ag (173), ag (177), ag (198), ag (202), ag (203), ag (217), ag (238), ag (244), ag (254), ag (260), ag (262), ag (270), ag (278), ag (283), ag (287), ag (301), ag (302), ag (311), gt (319), Editing mismatches: 21, all mismatches: 22, alignment length: 318, cluster length: 194, total number of As: 62 Locations in RNA: 118 132 134 173 177 198 202 203 217 238 244 254 260 262 270 278 283 287 301 302 311 Locations in genome: 42987764 42987750 42987748 42987709 42987705 42987684 42987680 42987679 42987665 42987644 42987638 42987628 42987622 42987620 42987612 42987604 42987599 42987595 42987581 42987580 42987571 Upstream nucleotide (in genome): a a a g a c a g c c t c t c t a a t a a a Upstream nucleotide summary: a: 10, c: 5, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): a c a g t g c a g g g c g t g a t a c a a Downstream nucleotide summary: a: 7, c: 4, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 5, ac: 3, ag: 0, at: 2, ca: 0, cc: 1, cg: 3, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 3, tt: 0, other: 0 >chr8:42987560-42987877 (+) taggctggccaaaatagtgaaaccccatctctactaaaaatacaaaaaaattagctgggcatagtggcacacgtctgtagtcccaggtacttgggagtctgaggcaggagaatcgtttgaacccaggaggcggaggttgtggtgaatcgagattgtcccattgcactccaacctgggcgacaagagcaaaactctgtctcaaaaaaaaaaaaaaattccatcataaaagaaaaaaaattcaattgtaaattccagttttttcagtgtcaacatccagttgtttatgtccagaaaataaaaatacaattgatttttgta >AI682353:5-322 (-) tagtctggccagaatagtgaggccccatctctactgaaagtacagaaaaattggctgggcgtggtggcgcacgtctgtggtcccgggtacttgggagtctgaggcgggagaatcgtttgggcccgggaggcggaggttgtggtgagtcgggattgtcccattgcactccaacctgggcgacaagagcagagctctgtctcaaaagaaaaaaaaaattccatcataaaagaaaaaaaattcaattgtaaattccagttttttcagtgtcaacatccagttgtttatgtccagaaaataaaaatacaattgatttttgta End editing Edited EST: DB343497, type: ag Aligns to: chr9:95749222-95749713 (+-) All mismatches: ag (79), ag (111), ag (115), ag (120), ag (121), ag (142), ag (177), ag (179), ag (180), ag (187), ag (211), ag (224), ag (255), ag (271), Editing mismatches: 14, all mismatches: 14, alignment length: 492, cluster length: 193, total number of As: 56 Locations in RNA: 79 111 115 120 121 142 177 179 180 187 211 224 255 271 Locations in genome: 95749635 95749603 95749599 95749594 95749593 95749572 95749537 95749535 95749534 95749527 95749503 95749490 95749459 95749443 Upstream nucleotide (in genome): a t c a t a a a t a c c t c Upstream nucleotide summary: a: 6, c: 4, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): c c g t a g c a a c g g a g Downstream nucleotide summary: a: 4, c: 4, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 1, at: 1, ca: 0, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 3, tc: 1, tg: 0, tt: 0, other: 0 >chr9:95749222-95749713 (+) attcagcaagagccatgagtgcatgaataacagggagtgtgtgtttaagaagtcaagtgacatacaaagtgaaaacaaagaggcagacttgcctccgaggtagacagtccagtgagtgcacaagccatttcagaacacacacagagaaaacaggagaataggcagtatgggtttttggaaaacaaccaattttagttgaaaaagcagaggaggctgtgtgcagtggctcacgcctgtaatgccagcactttgggaggctgaggtgggcagatcatgaggtcaggagatcgagaccatcctggctaacacggtaaaaccccatctctactaaaaatacaaaaaaatagctaagtgtggtggtgggtgcctgtaatcccagctacttgggaggctgaggcagaagaatggtgtgaacccaggaggcggagcttgcagagagccgagatagtgccactgcactccagcctggacgacagagcgagactctgtctc >DB343497:1-492 (-) attcagcaagagccatgagtgcatgaataacagggagtgtgtgtttaagaagtcaagtgacatncaaagtgaaaacaaagaggcagacttgcctccgaggtagacagtccagtgagtgcacaagccatttcagnacacacacagagaaaacaggagaataggcagtatgggtttttggaaaacaaccaattttagttgaaaaagcagaggaggctgtgtgcggtggctcacgcctgtgatgccagcactttgggaggctgaggtgggcggatcatgaggtcgggagatcgagaccatcctggctagcacggtggagccccatctctactaaaaatacaaaaaaatagctaggtgtggtggtgggtgcctgtggtcccggctgcttgggaggctgaggcagaagaatggtgtgagcccaggaggcggagcttgcagagagccgagatagtgccactgcactccagcctggacgacagagcgagactctgtctc End editing Edited EST: DW421351, type: ag Aligns to: chr9:131278275-131278556 (+-) All mismatches: ag (19), ga (20), ag (27), ag (59), ag (74), ag (138), ag (195), ag (197), ag (200), ag (203), ag (207), ag (208), ag (212), ag (237), ag (238), ag (244), ag (251), ag (257), ag (258), ag (263), ag (273), Editing mismatches: 20, all mismatches: 21, alignment length: 282, cluster length: 255, total number of As: 53 Locations in RNA: 19 27 59 74 138 195 197 200 203 207 208 212 237 238 244 251 257 258 263 273 Locations in genome: 131278554 131278545 131278513 131278498 131278434 131278377 131278375 131278372 131278369 131278366 131278365 131278361 131278336 131278335 131278329 131278322 131278316 131278315 131278310 131278300 Upstream nucleotide (in genome): g t c a c c t g t a t c a c c c a c c a Upstream nucleotide summary: a: 5, c: 9, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): a g g g c g c t g c a a g a g c c a c t Downstream nucleotide summary: a: 5, c: 6, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 2, at: 1, ca: 3, cc: 3, cg: 3, ct: 0, ga: 1, gc: 0, gg: 0, gt: 1, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr9:131278275-131278556 (+) ggctggactggactacagtggtgtaatcttggctcactgcaacctccacctcccaggttcaagtgattctcctgcctcagcctcccaagtaac-taggattacaggctcgcgccaccacacccagctactttattttctatttactagagacggggtttcactatgttggtcaggctggtctcgaactcctgacctcaggtgattcacctgcctcagcctcccaaggtgctgggattacaggcatgagccacgatgcccagtcaggaccttagcctcttgaaa >DW421351:17-298 (-) ggctggactggactacagtggtgtagtcttggctcgctgcggcctccgcctcccgggttcgggtgattctcctgcctcagcctcccgagtggcttggggttgcgggctcgcgccaccacacccagctactttattttctatttactagagacggggtttcgctatgttggtcaggctggtctcgaactcctgacctcaggtgattcacctgcctcagcctcccagggtgctgggattacgggcatgagccacgatgcccagtcaggaccttggcctct-agaa End editing Edited EST: AA219629, type: ag Aligns to: chr9:37509905-37510379 (+-) All mismatches: ag (63), ag (86), ag (88), ag (94), ag (97), ag (109), ag (110), ag (155), ag (163), ag (169), ag (191), ag (195), ag (198), ag (199), ag (200), ag (204), ag (206), ag (207), ag (211), ag (228), ag (240), ag (278), ag (281), ag (304), ag (321), ag (327), ag (341), ga (405), ac (478), Editing mismatches: 27, all mismatches: 29, alignment length: 478, cluster length: 279, total number of As: 74 Locations in RNA: 63 86 88 94 97 109 110 155 163 169 191 195 198 199 200 204 206 207 211 228 240 278 281 304 321 327 341 Locations in genome: 37510320 37510297 37510295 37510289 37510286 37510274 37510273 37510228 37510220 37510214 37510192 37510188 37510185 37510184 37510183 37510179 37510177 37510176 37510172 37510155 37510143 37510105 37510102 37510079 37510062 37510056 37510042 Upstream nucleotide (in genome): a c c c a a c c c t c t a a t t a a a c t c a a c c a Upstream nucleotide summary: a: 11, c: 11, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): c c c t c g a g g g g g t a a c t a a a g g g t g g g Downstream nucleotide summary: a: 6, c: 5, g: 12, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 3, at: 3, ca: 2, cc: 2, cg: 6, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 3, tt: 0, other: 0 >chr9:37509905-37510379 (+) aaaaccaatgaatattttcattttaatagtttaatgtatgtttatagtaatat-aaaaagtctttt-cagtgtgt-gaaaaaaagacatgttgtaggatgggatcctggaatggaaaaaggacattaggtaacaaactaaagaaatctgaggccaggcacagtggctcatgtttgtaatcccagcactttgggggattgaagcaggcggatcacttgagcccaggagtttgagaccaggctaggcaacatggcaaaaccccgtctctacaaaaaaatacataaattagccaggcgtggtggtgcatgcctgtagtcccagctgctcaggaggctgaggtgggaggatcacctgagtgagcctgaggaggtcaaggctgcggtgaaccatgatcacaccactgcactctagcctgggcaacagagtgagatcccgtttcaaaaagaaaaaaatctgaataaactatggactttagttaa >AA219629:4-481 (-) aaacccaatgaatattttcattttaatagtttaatgtatgtttatagtaatataaaaaagtcttttccagtgtntgaaaaaaaagacatgttgtaggatgggatcctggaatggaaaaaggacattaggtaacaaactaaggaaatctgaggccgggcacggtggctcatgtttgtagtcccagcactttgggggattgaggcgggcggatcacttgagcccaggagtttgagaccaggctgggcaacatggcgaaaccccgtctctacagaaaggtgcatgggttggccgggcgtggtggtgcatgcctgtggtcccggctgctcgggaggctgaggtgggaggatcacctgagtgagcctgaggaggtcggggctgcggtgagccgtgatcgcgccactgcactctagcctgggcagcagagtgagatcccgtttcaaaaagaaaaaaatctgaataaactatggactttagttaa End editing Edited EST: DW422651, type: ag Aligns to: chrX:41119298-41119586 (+-) All mismatches: tg (9), ag (35), ag (47), ag (48), ag (62), ag (124), ag (127), ag (141), ag (146), ag (152), ag (168), ag (178), ag (190), ag (203), ag (204), ag (207), ag (233), ag (267), ag (279), ag (280), ag (283), ag (285), tc (287), Editing mismatches: 21, all mismatches: 23, alignment length: 289, cluster length: 251, total number of As: 51 Locations in RNA: 35 47 48 62 124 127 141 146 152 168 178 190 203 204 207 233 267 279 280 283 285 Locations in genome: 41119557 41119545 41119544 41119530 41119468 41119465 41119451 41119446 41119440 41119424 41119414 41119402 41119389 41119388 41119385 41119359 41119325 41119313 41119312 41119309 41119307 Upstream nucleotide (in genome): t a a c t t a c c t t c a c a c c a g g g Upstream nucleotide summary: a: 6, c: 7, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): c g a c g g t g t c g g t a g c c g a c g Downstream nucleotide summary: a: 3, c: 6, g: 9, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 3, at: 2, ca: 1, cc: 3, cg: 2, ct: 1, ga: 1, gc: 1, gg: 1, gt: 0, ta: 0, tc: 2, tg: 3, tt: 0, other: 0 >chrX:41119298-41119586 (+) ttttttttgagacgaagtctttctgtcaccaggctggagtgcagtggcacaatcttggctcactgcaacctccgcctcctggcttcaagcaattctcctgcctcagcctcctgagtagctgggactacaggcgcatgccaccatgcccagctaatttttgtatttttagtagagatggggttttaccatgttggccaggatggtctcgatctcttgacctcatgatctaaccacctcggcctcccaaagtgctgggattacaggtgtgagccaccatgcccggccttaa >DW422651:6-294 (-) tttttttcggggcggggtctttctgtcgccaggctggagtgcagtggcacaatcttggctcgctgcaacctccgcctcctggcttcaggcggttctcctgcctcggcctcctgagtggctgggactgcaggcgcatgccaccgtgcccggctagtttttgtatttttggtggagatggggttttaccatgttggccaggatggtctcgatctcttgacctcatgatctaaccgcctcggcctcccagggtgctgggattgcaggtgtgagccaccatgcccggccgtaa End editing Edited EST: BM673290, type: ag Aligns to: chrX:47022085-47022470 (+-) All mismatches: ag (222), ag (239), ag (259), ag (262), ag (263), ag (280), ag (295), ag (321), ag (322), ag (332), ag (348), ag (351), ag (354), ag (361), ag (362), ag (366), ag (377), ag (382), ag (387), Editing mismatches: 19, all mismatches: 19, alignment length: 386, cluster length: 166, total number of As: 44 Locations in RNA: 222 239 259 262 263 280 295 321 322 332 348 351 354 361 362 366 377 382 387 Locations in genome: 47022252 47022235 47022215 47022212 47022211 47022194 47022179 47022153 47022152 47022142 47022126 47022123 47022120 47022113 47022112 47022108 47022097 47022092 47022087 Upstream nucleotide (in genome): a c g a c a c a t c t a a a a t a g a Upstream nucleotide summary: a: 10, c: 4, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): a c g t a c g t a g g t a a a c c t c Downstream nucleotide summary: a: 6, c: 5, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 4, ac: 3, ag: 0, at: 3, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 1, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chrX:47022085-47022470 (+) caacatgatgaaaccccgtctctactaaaaatgcaaaaattagctgggggtggtggcaggtgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccgggtggaggttgcaatgagctgagatggcgccaccgcactccagcctggcaacaaagcgagactccatctcaaaaaaaaaaaatagagtatggagagagaaatagagaaattttacagggaagaaacctggcagacagcaccttaactaggtgatcatggttaacatcaccagagataagtcatgttgttatcatgtactcttctgtgatatgatcagaagggcatttcactatctcacttctgttgtatgcttctccaaaaaaaaaaaaaaa >BM673290:4-389 (-) cagcatggtgaagccccgtctctgctaggaatgcagaagttggctgggggtggtggcgggtgcctgtggtcccagctacttgggaggctgaggcgggagaatcgcttgagcccgggtggaggttgcggtgggctgagatggcgccaccgcgctccagcctggcaacagagcgagactccatctcaaaaaaaaaaaatagagtatggagagagaaatagagaaattttacagggaagaaacctggcagacagcaccttaactaggtgatcatggttaacatcaccagagataagtcatgttgttatcatgtactcttctgtgatatgatcagaagggcatttcactatctcacttctgttgtatgcttctccaaaaaaaaaaaaaaa End editing Edited EST: CB053050, type: ag Aligns to: chrX:131564206-131564793 (+-) All mismatches: ag (9), ag (39), ag (40), ag (48), ag (52), ag (57), ag (58), ag (78), ag (80), ag (93), ag (98), ag (117), ta (157), ta (158), ag (162), ag (197), ag (199), ag (200), ag (207), ag (218), ag (221), ag (231), ag (242), ag (260), ag (288), ag (298), ag (305), ag (324), ag (333), ag (378), ag (402), ag (411), ag (423), ag (431), ag (447), ag (453), ag (471), ag (502), ag (504), ag (515), ag (521), ag (526), Editing mismatches: 40, all mismatches: 42, alignment length: 588, cluster length: 518, total number of As: 144 Locations in RNA: 9 39 40 48 52 57 58 78 80 93 98 117 162 197 199 200 207 218 221 231 242 260 288 298 305 324 333 378 402 411 423 431 447 453 471 502 504 515 521 526 Locations in genome: 131564785 131564755 131564754 131564746 131564742 131564737 131564736 131564716 131564714 131564701 131564696 131564677 131564632 131564597 131564595 131564594 131564587 131564576 131564573 131564563 131564552 131564534 131564506 131564496 131564489 131564470 131564461 131564416 131564392 131564383 131564371 131564363 131564347 131564341 131564323 131564292 131564290 131564279 131564273 131564268 Upstream nucleotide (in genome): a a t c t a t t t t g a c a a t t t g c c a t c t c g t t t a a t a c t a a t g Upstream nucleotide summary: a: 12, c: 7, g: 4, t: 17, other: 0 Downstream nucleotide (in genome): a a a c a c a t t t g t t t a a t c g c t g g c t g t t c a a t c t g a t a c a Downstream nucleotide summary: a: 12, c: 8, g: 6, t: 14, other: 0 Dinucleotide summary: aa: 5, ac: 1, ag: 1, at: 5, ca: 0, cc: 3, cg: 2, ct: 2, ga: 1, gc: 0, gg: 2, gt: 1, ta: 6, tc: 4, tg: 1, tt: 6, other: 0 >chrX:131564206-131564793 (+) gagcctcaaaggacagactaaaaaagctaacttttaaaatacttcattttgaaataattttgaacttacaaaaaaatcgcaaaaataatacctggagtccctgtatacccttcacccagattcccctactgttaaatacttacataaccataacacaattaccaaaaccaggaaattaacactggtacgagactcttaacaagagatcttatttgaatgtcaccaattttcttcctaatgttcttctgttctaggatccaatccaggttcccacatggcatttattcctcacttctccttagtctcctccaatctgtgacactttctaagtctttccttgtctttcatgaccatgacactttggatgagtactggtcatttattctgtaaaatgcctctcactttgtgtttgttgaatgttttctcatgattagaccgagaccatgtctttttggcaggaacatcacagaaatggtgtgtatcctatctgagggtatgtgatattgatatatcttatcactcattatgttaaccttaaacacctggttaaagtggcatctgctgggtttctccactgtaaagtgacta >CB053050:1-588 (-) gagcctcaaaggacagactaaaaaagctaacttttaaaatacttcattttgaaataattttggacttgcaaaagaatcgcaaaagtgatacctggagtccctgtatacccttcacccggattcccctactgttaagtacttgcataaccataacacagttaccaagaccaggaaattgacactggtgcgagactcttaacaagagatcttgtttgaatgtcaccaattttcttcctaatgttcttctgttctagggtccaatccgggttcccacatggcatttgttcctcgcttctccttggtctcctccaatctgtgacactttctaggtctttccttgtctttcgtgaccatgacgctttggatgggtgctggtcatttgttctgtggagtgcctctcactttgtgtttgttgaatgttttctcgtgaaaagaccgagaccatgtctttttggcaggaacatcacagaagtggtgtgtatcctatctgggggtgtgtgatattgatgtgtcttatcactcattatgttggccttgaacgcctggttggagtggcatctgctgggtttctccactgtagagtgacta End editing Edited EST: BE677279, type: ag Aligns to: chrX:117733916-117734389 (+-) All mismatches: ag (5), ag (108), ag (114), ag (127), ag (131), ag (141), ag (163), ag (167), ag (185), ag (196), ag (197), ag (204), ag (222), ag (245), ag (248), ag (275), ag (277), ag (283), Editing mismatches: 18, all mismatches: 18, alignment length: 474, cluster length: 279, total number of As: 76 Locations in RNA: 5 108 114 127 131 141 163 167 185 196 197 204 222 245 248 275 277 283 Locations in genome: 117734385 117734282 117734276 117734263 117734259 117734249 117734227 117734223 117734205 117734194 117734193 117734186 117734168 117734145 117734142 117734115 117734113 117734107 Upstream nucleotide (in genome): a a c c t t c c t a a c c g c t t c Upstream nucleotide summary: a: 4, c: 8, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): a t g g c a g g c c a t a g g a t c Downstream nucleotide summary: a: 5, c: 4, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 1, ca: 1, cc: 1, cg: 5, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 2, tg: 0, tt: 1, other: 0 >chrX:117733916-117734389 (+) atatatgggttctggaatcataaactgagcttgtatcccacatgtcacttactagctctgtaactgaccatgaccaagttacttctctgagcctttgtttcttcatctgtcatgtgaggataacaatagtgcccatcttgtagggtggttgtgagacttaaatgagatgatggagctgggcatggtgcttcacgcctataatcccagcactttgggaggccgaggcaggagattgcttgagctcaggagttcaagaccggcctgaccatcatggcgaaaccccgtctctactaagaatacaaaaatcagccagacgtggtggcatacgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgagctgagattgtgccagcctgggtgacagcgagattctggtttgttttctttttttttaaaaaaaaaaaaaaaga >BE677279:1-474 (-) atatatgggttctggaatcataaactgagcttgtatcccacatgtcacttactagctctgtaactgaccatgaccaagttacttctctgagcctttgtttcttcatctgtcatgtgaggataacaatagtgcccatcttgtagggtggttgtgagacttaaatgagatgatggagctgggcatggtgcttcgcgcctgtgatcccagcactttgggaggccgaggcgggggattgcttgagctcaggagttcgagaccggcctgaccatcgtggcgaggccccgtctctgctaagaatacaaaaatcggccggacgtggtggcatacgcctgtgatcccagctgctcgggaggctgaggcgggagagtcgcttgaacctgggaggcggaggttgcagtgagctgagattgtgccagcctgggtgacagcgagattctggtttgttttctttttttttaaaaaaaaaaaagaaga End editing Edited EST: AA165065, type: ag Aligns to: chrX:54591227-54591709 (+-) All mismatches: ag (296), ag (300), ag (306), ag (307), ag (309), ag (334), ag (359), ag (364), ag (415), ag (440), ag (465), ag (471), Editing mismatches: 12, all mismatches: 12, alignment length: 484, cluster length: 175, total number of As: 37 Locations in RNA: 296 300 306 307 309 334 359 364 415 440 465 471 Locations in genome: 54591415 54591411 54591405 54591404 54591402 54591377 54591352 54591347 54591296 54591271 54591247 54591241 Upstream nucleotide (in genome): c c a a c c g t t g a c Upstream nucleotide summary: a: 3, c: 5, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): c c g a a g g g a t c c Downstream nucleotide summary: a: 3, c: 4, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 0, ca: 1, cc: 3, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 1, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chrX:54591227-54591709 (+) cgtgatcttggctcactgcaacctccacctcctgggttcaagc-gattctcctgccttagcctcccgagtaacagggactacaggtgcccaccaccatgctgggctaatttttgtatttttagtagaggcgggggtttctccacactggccaggctggtcttgaacttctgacctcaaaagatccacccacctcggcctcccaaagtgctgggattataggcatgaaccaccgtgtccggccatatattttcgtcttttgaagactgttatatacatgaaattatatggtatgtagcattttgagagcgacttcttttgctatgagtaatacatttgagattcatccatatttctcagtatattaatagttcttatttctgagtcactccattgtgtggatttactactgtttgttccccagttgaaggatgtttaggatctttgcagttttggacaattacaagtaaagctgctataaacatt >AA165065:2-485 (-) cgtgatcttggctcgctgcagcctccacctcctgggttcaagcgggttctcctgccttagcctcccgagtgacagggactacaggtgcccaccaccatgctgggctaatttttgtatttttggtaggggcgggggtttctccacactggccgggctggtcttgaacttctgacctcgagggatccgcccgcctcggcctcccaaagtgctgggattataggcatgaaccaccgtgtccggccatatattttcgtcttttgaagactgttatatacatgaaattatatggtatgtagcattttgagagcgacttcttttgctatgagtaatacatttgagattcatccatatttctcagtatattaatagttcttatttctgagtcactccattgtgtggatttactactgtttgttccccagttgaaggatgtttaggatctttgcagttttggacaattacaagtaaagctgctataaacatt End editing Edited EST: AA936609, type: ag Aligns to: chrX:57664406-57664794 (+-) All mismatches: ag (20), ag (24), ag (39), ag (40), ag (43), ag (72), ag (73), ag (119), ag (141), ag (198), ag (208), ag (211), ag (214), ag (215), ag (229), ag (230), ag (232), ag (251), ag (252), ag (257), ag (258), ag (271), ag (275), ag (276), ag (286), ag (287), ag (289), ag (292), ag (293), ag (300), ag (314), ag (334), ag (337), ag (338), ag (368), ag (370), ag (374), ag (375), ag (380), ag (381), ag (385), ag (386), Editing mismatches: 42, all mismatches: 42, alignment length: 389, cluster length: 367, total number of As: 128 Locations in RNA: 20 24 39 40 43 72 73 119 141 198 208 211 214 215 229 230 232 251 252 257 258 271 275 276 286 287 289 292 293 300 314 334 337 338 368 370 374 375 380 381 385 386 Locations in genome: 57664775 57664771 57664756 57664755 57664752 57664723 57664722 57664676 57664654 57664597 57664587 57664584 57664581 57664580 57664566 57664565 57664563 57664544 57664543 57664538 57664537 57664524 57664520 57664519 57664509 57664508 57664506 57664503 57664502 57664495 57664481 57664461 57664458 57664457 57664427 57664425 57664421 57664420 57664415 57664414 57664410 57664409 Upstream nucleotide (in genome): t c a a a a c a a c a g a c a t c a a a a a a a a t c a a a c t a a t c a t a a a t Upstream nucleotide summary: a: 26, c: 8, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): t c c a c a a t g c c g t a g a t c a a a c c a t a t c a g g a t a t t c a g a a a Downstream nucleotide summary: a: 17, c: 10, g: 6, t: 9, other: 0 Dinucleotide summary: aa: 10, ac: 8, ag: 4, at: 4, ca: 2, cc: 2, cg: 1, ct: 3, ga: 0, gc: 0, gg: 1, gt: 0, ta: 5, tc: 0, tg: 0, tt: 2, other: 0 >chrX:57664406-57664794 (+) gataaagaaagtgtaacacatatacactttggaatactatgcagtcacaaaaattaatgagttcatgtcctttgcaggggcatggatgaagctggaaaccataattctcagcaaactaacacaggaacagaaaaccaaacgcagcatgttctcactcataagtggaagttgaacaatgagaacacacggacacagggaggggatcatcacacactggggctgttttggggttgggggcaatgggagcaagagcattcagacaaatacctaatgcatgcaaggcttataacctagatgatgagttgactggtgcagcaaaccaccatggcacatgtatacctgtgtaacaaacctgcatgttctgcacatatatctcagaacttaaagtt >AA936609:1-389 (-) gatggagagggtgtggcacgtgtacactttggaatactatgcagtcacaaaggttgatgagttcatgtcctttgcgggggcatggatgaggctggaggccgtggttctcagcaggctagcacaggaacagaggaccaggcgcagcatgttctcactcgtgggtggaagttgaacggtgggagcacacggacgcagggaggggatcatcacacactggggctgttttggggttgggggcaatgggagcaggagcattcagacaaatacctagtgcatgcaaggcttataacctagatgatgagttgactggtgcagcggaccaccatggcacatgtatacctgtgtagcaggcctgcatgttctgcgcatgtatctcagaacttaaagtt End editing Edited EST: AI801791, type: ag Aligns to: chrX:73228514-73228853 (+-) All mismatches: ag (54), ag (58), ag (71), ag (74), ag (84), ag (87), ag (93), ag (119), ag (129), ag (138), ag (175), ag (185), ag (186), ag (200), ag (209), Editing mismatches: 15, all mismatches: 15, alignment length: 340, cluster length: 156, total number of As: 45 Locations in RNA: 54 58 71 74 84 87 93 119 129 138 175 185 186 200 209 Locations in genome: 73228800 73228796 73228783 73228780 73228770 73228767 73228761 73228735 73228725 73228716 73228679 73228669 73228668 73228654 73228645 Upstream nucleotide (in genome): g c g c c a c a a c a a c g c Upstream nucleotide summary: a: 5, c: 7, g: 3, t: 0, other: 0 Downstream nucleotide (in genome): g g g g c t g t g t c c a g g Downstream nucleotide summary: a: 1, c: 3, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 2, ca: 1, cc: 1, cg: 4, ct: 1, ga: 0, gc: 0, gg: 3, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chrX:73228514-73228853 (+) caccagaatctgtttttttgtttgtttgtttgtttgtttttgactttgtaatagccatgggctgggctcagtgactcacgcctgtaatcctagcactgggggaggctgaggtgggcggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatactaaaattacctgtgcatggtggcaagtgcctgtaatcccagctactcgggagtctgaggcagtagaatcacttgaacccaggaggtggaggttgcagtgagcggagattgtgccactgcacttggacctggctgacacagcaagactatgttt >AI801791:1-340 (-) caccagaatctgtttttttgtttgtttgtttgtttgtttttgactttgtaatagccatgggctgggctcagtgactcacgcctgtaatcctagcactgggggaggctgaggtgggcggatcacttgaggtcgggagttcgggaccagcctggccggcatggtgaagccccatctctactaaaaatactaaaattacctgtgcgtggtggcaggtgcctgtagtcccagctactcgggagtctgaggcggtagagtcgcttgaacccggggggtggaggttgcggtgggcggagattgtgccactgcacttggacctggctgacacagcaagactatgttt End editing Edited EST: DA331775, type: ag Aligns to: chr10:102251957-102252367 (-+) All mismatches: ag (94), ag (110), ag (125), ag (134), ag (162), ag (184), ag (185), ag (193), ag (223), ag (249), ag (250), ag (263), ag (278), ag (314), tg (401), Editing mismatches: 14, all mismatches: 15, alignment length: 412, cluster length: 221, total number of As: 57 Locations in RNA: 94 110 125 134 162 184 185 193 223 249 250 263 278 314 Locations in genome: 102252274 102252258 102252243 102252234 102252206 102252184 102252183 102252175 102252145 102252119 102252118 102252105 102252090 102252054 Upstream nucleotide (in genome): c t c a c c a g t t a c g g Upstream nucleotide summary: a: 3, c: 5, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): g c c a g a c g a a t g g g Downstream nucleotide summary: a: 4, c: 3, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 1, ca: 1, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 3, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr10:102251957-102252367 (-) tttcaatctatatgcatttaatttctttcttatgccttattgtagtgactaggacttccagtctctgttaaataagaatagtgaacataagccaggcgctgtggctcatacctgtaatcccagcactttgggaaactgaggtgggtggatcacctaaggtcaggagttgagaccagcctggccaacatggtgagaccccatctctactaaaaatataaaattaaccgggcatggtggcgcatgcctgtaatcccagctactcaggaggcaaggctggagagtcgcttgaacccgggaggtggaggttgcagtgagctgagattgtgccattgcactccagcctgggcaccaagagcgaaactctgtctcaaaaaaaataaataaatagtgaacatgaatgttcttgcc-ttg >DA331775:1-412 (+) tttcaatctatatgcatttaatttctttcttatgccttattgtagtgactaggacttccagtctctgttaaataagaatagtgaacataagccgggcgctgtggctcatgcctgtaatcccagcgctttgggagactgaggtgggtggatcacctaaggtcgggagttgagaccagcctggccggcatggtgggaccccatctctactaaaaatataaaattgaccgggcatggtggcgcatgcctgtggtcccagctactcgggaggcaaggctggggagtcgcttgaacccgggaggtggaggttgcagtgggctgagattgtgccattgcactccagcctgggcaccaagagcgaaactctgtctcaaaaaaaataaataaatagtgaacatgaatggtcttgcccttg End editing Edited EST: DW409446, type: ag Aligns to: chr10:103639119-103639441 (-+) All mismatches: ag (76), ag (82), ag (122), ag (125), ag (126), ag (131), ag (145), ag (146), ag (154), ag (155), ag (156), ag (170), ag (172), ag (182), ag (183), ag (184), ag (187), ag (190), ag (191), ag (207), ag (213), ag (214), ag (219), ag (223), ag (243), ag (246), ag (255), ag (259), ag (275), ag (278), ag (279), ag (283), ag (284), ag (289), tc (327), Editing mismatches: 34, all mismatches: 35, alignment length: 322, cluster length: 214, total number of As: 63 Locations in RNA: 76 82 122 125 126 131 145 146 154 155 156 170 172 182 183 184 187 190 191 207 213 214 219 223 243 246 255 259 275 278 279 283 284 289 Locations in genome: 103639382 103639376 103639336 103639333 103639332 103639327 103639313 103639312 103639304 103639303 103639302 103639288 103639286 103639276 103639275 103639274 103639271 103639268 103639267 103639251 103639245 103639244 103639239 103639235 103639215 103639212 103639203 103639199 103639183 103639180 103639179 103639175 103639174 103639169 Upstream nucleotide (in genome): t c c g a g c a g a a t a a a a t c a c t a c t g a a c c t a c a t Upstream nucleotide summary: a: 14, c: 9, g: 4, t: 7, other: 0 Downstream nucleotide (in genome): g g g a t g a c a a a a a a a t g a g c a t g c g t c g g a g a g c Downstream nucleotide summary: a: 13, c: 5, g: 12, t: 4, other: 0 Dinucleotide summary: aa: 5, ac: 2, ag: 3, at: 4, ca: 3, cc: 1, cg: 5, ct: 0, ga: 2, gc: 0, gg: 2, gt: 0, ta: 3, tc: 2, tg: 2, tt: 0, other: 0 >chr10:103639119-103639441 (-) tatatgggttatttacttaattcttatgtcataggtcgggcatggtgattcatgcctgtagtcccagcacttttggaggccgaggtgggcggatcaactggggccaggaatttgagaccagcctggccaacatggtgaaaacccatctctactaaaaatacaaaaaaattagcaaggcgtggtggtgggcacctgtaatcccagctactcgggaggctgagacaggagaatctcttgaacccaggaggtggaggttgcagtaagccaagattacgccattgcactccagcctgggcaacaagagtgaaacttaaaaaaaaaaa >DW409446:17-338 (+) tatatgggttatttacttaattcttatgtcataggtcgggcatggtgattcatgcctgtggtcccggcacttttggaggccgaggtgggcggatcaactggggccgggggtttgggaccagcctggccggcatggtggggacccatctctactgagaatacaaaagggttggcggggcgtggtggtgggcgcctgtggtcccggctgctcgggaggctgagacaggggagtctcttgagcccgggaggtggaggttgcggtgggccgggattgcgccattgcactccagcctgggcaacaagagtgaaacc-aaaaaaaaaaa End editing Edited EST: DW423832, type: ag Aligns to: chr10:135115245-135115518 (-+) All mismatches: ag (22), ag (36), ag (142), ag (145), ag (148), ag (149), ag (152), ag (178), ag (179), ag (219), ag (220), ag (244), Editing mismatches: 12, all mismatches: 12, alignment length: 274, cluster length: 223, total number of As: 56 Locations in RNA: 22 36 142 145 148 149 152 178 179 219 220 244 Locations in genome: 135115513 135115499 135115393 135115390 135115387 135115386 135115383 135115357 135115356 135115316 135115315 135115291 Upstream nucleotide (in genome): c c t a a a t t a g a g Upstream nucleotide summary: a: 5, c: 2, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g c c a a t g a t a c g Downstream nucleotide summary: a: 4, c: 3, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 2, ca: 0, cc: 1, cg: 1, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr10:135115245-135115518 (-) gggccaggcgcggtggctcacacctgtaatcccagcactttgggaggctgaggcaggtggatcacaaggtcaggagatcaagaccaccctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagctgggtgtggtggcgggcacctgtaatcccagctactcggggggctgaggcaggagagtggcgtgaacccgggaggtggagcttgcagtgagccgagatatcgtgccactgcattccagcctgggcgtcagagtgag >DW423832:17-290 (+) gggccgggcgcggtggctcgcacctgtaatcccagcactttgggaggctgaggcaggtggatcacaaggtcaggagatcaagaccaccctggctaacacggtgaaaccccgtctctactaaaaatgcagaaggttggctgggtgtggtggcgggcacctgtggtcccagctactcggggggctgaggcaggagagtggcgtgggcccgggaggtggagcttgcagtgggccgagatatcgtgccactgcattccagcctgggcgtcagagtgag End editing Edited EST: DW430716, type: ag Aligns to: chr10:14972496-14972751 (-+) All mismatches: ag (27), ag (62), ag (63), ag (76), ag (77), ag (108), ag (119), ag (139), ag (140), ag (171), ag (197), ag (207), ag (243), Editing mismatches: 13, all mismatches: 13, alignment length: 256, cluster length: 217, total number of As: 55 Locations in RNA: 27 62 63 76 77 108 119 139 140 171 197 207 243 Locations in genome: 14972740 14972705 14972704 14972691 14972690 14972659 14972648 14972628 14972627 14972596 14972570 14972560 14972524 Upstream nucleotide (in genome): a t a t a c a c a t t t t Upstream nucleotide summary: a: 5, c: 2, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): c a t a g g c a a g g c g Downstream nucleotide summary: a: 4, c: 3, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 1, ca: 1, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 3, tt: 0, other: 0 >chr10:14972496-14972751 (-) gtatacataaaacgtaaaccggccgggtgtggtggctcatgcctgtaatgctagtgctttaagaggccgaggcgtgtggatcacttgaggtcagcagttcgaaaccagtctgctcagtgtggcaaaaccccgtctctagtaaaaataaaaaaattagctgggcatggtggtgtgtgcctgtagccctagctactagggaggctgaggcatgagaatcacttgaacctaggaggcggaggttgcagtgagccaagat >DW430716:16-271 (+) gtatacataaagcgtaaaccggccgggtgtggtggctcatgcctgtggtgctagtgctttgggaggccgaggcgtgtggatcacttgaggtcggcagttcgaagccagtctgctcagtgtggcggaaccccgtctctagtaaaaataaaaaaattggctgggcatggtggtgtgtgcctgtggccctagctgctagggaggctgaggcatgagaatcacttgaacctgggaggcggaggttgcagtgagccaagat End editing Edited EST: CD514023, type: ag Aligns to: chr10:65173745-65174041 (-+) All mismatches: ag (67), ag (95), ag (98), ag (112), ag (151), ag (157), ag (198), ag (199), ag (223), ag (227), ag (228), ag (260), ga (297), Editing mismatches: 12, all mismatches: 13, alignment length: 297, cluster length: 194, total number of As: 55 Locations in RNA: 67 95 98 112 151 157 198 199 223 227 228 260 Locations in genome: 65173975 65173947 65173944 65173930 65173891 65173885 65173844 65173843 65173819 65173815 65173814 65173782 Upstream nucleotide (in genome): c c t t c c g a g c a c Upstream nucleotide summary: a: 2, c: 6, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): g g a c c g a c g a g g Downstream nucleotide summary: a: 3, c: 3, g: 6, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 1, cc: 1, cg: 4, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr10:65173745-65174041 (-) tgggtgcgtggctcatgcctgtgatcccagcactttgggaggccgaggcaggcagatcacgaggtcaggagatcgagaccatcctggttaacacagtaaaaccctgtctgtactaaaaatacaaaaaattagctgggcgtgttggcggacacctgcagtcccagctactcgggaggctgaggcaggagaatggcatgaacccaggaggtggggcttgcagtgagccaagatcgcaccactgcactccagcctggtcgacagtgcaagactccgtgtcaaaaaaaaaaaaaaaaaaag >CD514023:1-297 (+) tgggtgcgtggctcatgcctgtgatcccagcactttgggaggccgaggcaggcagatcacgaggtcgggagatcgagaccatcctggttaacacggtgaaaccctgtctgtgctaaaaatacaaaaaattagctgggcgtgttggcggacgcctgcggtcccagctactcgggaggctgaggcaggagaatggcatgggcccaggaggtggggcttgcagtgggccgggatcgcaccactgcactccagcctggtcgacggtgcaagactccgtgtcaaaaaaaaaaaaaaaaaaaa End editing Edited EST: BF116249, type: ga Aligns to: chr10:131565052-131565256 (-+) All mismatches: ga (30), ga (36), ga (50), ga (61), ga (66), ga (85), cg (89), ga (111), ga (115), ga (118), ga (131), ga (132), ga (136), ga (144), ga (146), gt (149), ga (152), ga (158), ga (164), ga (167), ga (173), ga (189), ga (191), ga (196), ga (200), ga (203), Editing mismatches: 24, all mismatches: 26, alignment length: 205, cluster length: 174, total number of Gs: 49 Locations in RNA: 30 36 50 61 66 85 111 115 118 131 132 136 144 146 152 158 164 167 173 189 191 196 200 203 Locations in genome: 131565227 131565221 131565207 131565196 131565191 131565172 131565146 131565142 131565139 131565126 131565125 131565121 131565113 131565111 131565105 131565099 131565093 131565090 131565084 131565068 131565066 131565061 131565057 131565054 Upstream nucleotide (in genome): a c a a t g g a a c g a g a t c c t a c g a t g Upstream nucleotide summary: a: 9, c: 5, g: 6, t: 4, other: 0 Downstream nucleotide (in genome): c c g a a c c a c g c t a t c g c c a g a g g a Downstream nucleotide summary: a: 7, c: 9, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 2, at: 2, ca: 0, cc: 2, cg: 3, ct: 0, ga: 3, gc: 3, gg: 0, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr10:131565052-131565256 (-) ttcggccagcaggcggggagcccgaggtagctcccgctcccttgagccaggcccctgccagacctgagctccctcccaagcctggcttccccaaccggtggccttcatgggccagaagccattccttcacggccagtcctccggagtagttgcccacggctccgctgctgcagaccactctgtggcacgggatgaggatggggac >BF116249:1-205 (+) ttcggccagcaggcggggagcccgaggtaactcccactcccttgagccaagcccctgccaaacctaagctccctcccaagcctgacttgcccaaccggtggccttcatggaccaaaaaccattccttcacaaccaatcctccgaaatatttacccacagctccactactgcaaaccactctgtggcacagaatgaagataggaac End editing Edited EST: AW771013, type: ga Aligns to: chr10:17277168-17277389 (-+) All mismatches: ga (265), ga (281), gc (283), ga (286), ga (301), ga (304), ga (310), ga (312), ga (334), ga (346), ga (349), ga (352), ga (360), ga (368), ga (371), ga (386), ga (409), ga (415), ga (416), ga (418), ga (424), ga (425), Editing mismatches: 21, all mismatches: 22, alignment length: 222, cluster length: 161, total number of Gs: 37 Locations in RNA: 265 281 286 301 304 310 312 334 346 349 352 360 368 371 386 409 415 416 418 424 425 Locations in genome: 17277336 17277320 17277315 17277300 17277297 17277291 17277289 17277267 17277255 17277252 17277249 17277241 17277233 17277230 17277215 17277192 17277186 17277185 17277183 17277177 17277176 Upstream nucleotide (in genome): a t a c a c a t t a c a g a c c t g c a g Upstream nucleotide summary: a: 8, c: 6, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): g a g a g a c a c g g t t t g c g c t g g Downstream nucleotide summary: a: 4, c: 4, g: 9, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 5, at: 2, ca: 2, cc: 1, cg: 2, ct: 1, ga: 0, gc: 1, gg: 1, gt: 1, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr10:17277168-17277389 (-) cctgctctcctcgccttccagcagcttcctgtaggtggcaatctcaatgtcaagggccatcttaacattgagcaggtcttggtattcacgaaggtgacgagccatttcctccttcatattctgaatctcatcctgcaggcggccaatagtgtcttggtagttagcagcttcaacggcaaagttctcttccatttcacgcatctggcgttccagggactcatt >AW771013:212-433 (+) cctgctctcctcnccttccancagcttcctgtaggtggcaatctcaatgtcaaaggccatcttaacattaaccaagtcttggtattcacaaaagtgacaaaccatttcctccttcatattctaaatctcatcctacaagcagccaataatgtcttgataattagcagcttcaacagcaaagttctcttccatttcacacatctaacattccaaagactcatt End editing Edited EST: AV709244, type: ag Aligns to: chr10:104587727-104588014 (-+) All mismatches: ct (17), ag (18), ag (26), ag (31), ag (61), ag (93), ag (103), ag (133), ag (153), ag (157), ag (169), ag (182), ag (186), ag (201), ag (225), Editing mismatches: 14, all mismatches: 15, alignment length: 288, cluster length: 209, total number of As: 56 Locations in RNA: 18 26 31 61 93 103 133 153 157 169 182 186 201 225 Locations in genome: 104588008 104587999 104587994 104587964 104587932 104587922 104587892 104587872 104587868 104587856 104587843 104587839 104587824 104587800 Upstream nucleotide (in genome): c a c c a a t c t t g c a g Upstream nucleotide summary: a: 4, c: 5, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): c t g c c c g c t c g g c g Downstream nucleotide summary: a: 0, c: 7, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 3, ag: 0, at: 1, ca: 0, cc: 3, cg: 2, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 1, tg: 1, tt: 1, other: 0 >chr10:104587727-104588014 (-) tggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatcacgaggtcaggagatcgagactgtcctggctaacacgatgaaaccccgtctctactaaaaatacaaaaaattagccgggcatggtggcgggcacctatagtcctagctactcgggaggctgaggcaggagaatggcatgaacccgggagggggagcttgcagtgagctgagatcgcgccactgcactccagcctgggcaacagtgcgagactccgtctcaaaaaaaaaaaaaa-aaaaa >AV709244:12-299 (+) tggcttg-gcctgtagtcccggcactttgggaggccgaggcgggcagatcgcgaggtcaggagatcgagactgtcctggctagcacgatgaagccccgtctctactaaaaatacaaaaaattggccgggcatggtggcgggcgcctgtagtcctagctgctcgggaggctggggcgggagaatggcatgagcccgggagggggagcttgcagtgggctgagatcgcgccactgcactccagcctgggcaacagtgcgagactccgtctcaaaaaaaaaaaaaacaaaaa End editing Edited EST: DA203928, type: ag Aligns to: chr11:67822591-67823161 (-+) All mismatches: ag (305), ag (342), ag (369), ag (388), ag (389), ag (392), ag (393), ag (418), ag (450), ag (468), ag (471), ag (495), ag (506), ag (507), ag (508), ag (521), ag (525), ag (546), ag (547), ag (548), ag (560), Editing mismatches: 21, all mismatches: 21, alignment length: 571, cluster length: 256, total number of As: 48 Locations in RNA: 305 342 369 388 389 392 393 418 450 468 471 495 506 507 508 521 525 546 547 548 560 Locations in genome: 67822858 67822821 67822794 67822775 67822774 67822771 67822770 67822745 67822713 67822695 67822692 67822668 67822657 67822656 67822655 67822642 67822638 67822617 67822616 67822615 67822603 Upstream nucleotide (in genome): g t a c a c a t c t t c c a a a g c a a t Upstream nucleotide summary: a: 8, c: 6, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): g c c a g a t g g g g g a a c g t a a g c Downstream nucleotide summary: a: 6, c: 4, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 3, at: 1, ca: 4, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 1, ta: 0, tc: 2, tg: 3, tt: 0, other: 0 >chr11:67822591-67823161 (-) ttcatgtgttttgtataattagtcattaaagaaatgtgaatcaaagcctcattgcgataccctacacacccacagtgatggctaaaacttgaaagaactgacggtcccaaatggcgagcacatggagcaatgggaatgcgcatgcgctgctgctgggaatgcagtcgcgacagccagtgtgaagatgggttagaccacccagcagccctcctggggaatttttccagaacaaatgaaaacaaattccacaccaagacttgcactcaaacactcatagcagcttcatttgtttgtctgtttttgagacagagtctcactctgttgcccaggcaggaggagtacagtggcccgatcttggctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctcttgagtagctgggattacaggcgcccgccaccgcacccagctaattttttatttttagtagagggggtttcgccgtgttgaccagtctggtctcaaactcctgacctcaagtgatccgtctgccttggccttccaaagtgttgggattacaggtgtgagcc >DA203928:2-572 (+) ttcatgtgttttgtataattagtcattaaagaaatgtgaatcaaagcctcattgcgataccctacacacccacagtgatggctaaaacttgaaagaactgacggtcccaaatggcgagcacatggagcaatgggaatgcgcatgcgctgctgctgggaatgcagtcgcgacagccagtgtgaagatgggttagaccacccagcagccctcctggggaatttttccagaacaaatgaaaacaaattccacaccaagacttgcactcaaacactcatagcagcttcatttgtttgtctgtttttgggacagagtctcactctgttgcccaggcaggaggagtgcagtggcccgatcttggctcactgcagcctccgcctcccgggttcgggcggttctcctgcctcagcctcttgagtggctgggattacaggcgcccgccaccgcacccggctaattttttatttttggtggagggggtttcgccgtgttgaccggtctggtctcgggctcctgacctcaggtggtccgtctgccttggccttccggggtgttgggattgcaggtgtgagcc End editing Edited EST: DA055788, type: ag Aligns to: chr11:67822616-67823163 (-+) All mismatches: ag (343), ag (364), ag (370), ag (389), ag (393), ag (394), ag (419), ag (429), ag (469), ag (507), ag (522), ag (526), Editing mismatches: 12, all mismatches: 12, alignment length: 548, cluster length: 184, total number of As: 34 Locations in RNA: 343 364 370 389 393 394 419 429 469 507 522 526 Locations in genome: 67822821 67822800 67822794 67822775 67822771 67822770 67822745 67822735 67822695 67822657 67822642 67822638 Upstream nucleotide (in genome): t c a c c a t t t c a g Upstream nucleotide summary: a: 3, c: 4, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): c c c a a t g c g a g t Downstream nucleotide summary: a: 3, c: 4, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 1, ca: 3, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 2, tg: 2, tt: 0, other: 0 >chr11:67822616-67823163 (-) ttttcatgtgttttgtataattagtcattaaagaaatgtgaatcaaagcctcattgcgataccctacacacccacagtgatggctaaaacttgaaagaactgacggtcccaaatggcgagcacatggagcaatgggaatgcgcatgcgctgctgctgggaatgcagtcgcgacagccagtgtgaagatgggttagaccacccagcagccctcctggggaatttttccagaacaaatgaaaacaaattccacaccaagacttgcactcaaacactcatagcagcttcatttgtttgtctgtttttgagacagagtctcactctgttgcccaggcaggaggagtacagtggcccgatcttggctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctcttgagtagctgggattacaggcgcccgccaccgcacccagctaattttttatttttagtagagggggtttcgccgtgttgaccagtctggtctcaaactcctgacctcaagtgatccgtctgccttggccttccaa >DA055788:1-548 (+) ttttcatgtgttttgtataattagtcattaaagaaatgtgaatcaaagcctcattgcgataccctacacacccacagtgatggctaaaacttgaaagaactgacggtcccaaatggcgagcacatggagcaatgggaatgcgcatgcgctgctgctgggaatgcagtcgcgacagccagtgtgaagatgggttagaccacccagcagccctcctggggaatttttccagaacaaatgaaaacaaattccacaccaagacttgcactcaaacactcatagcagcttcatttgtttgtctgtttttgagacagagtctcactctgttgcccaggcaggaggagtgcagtggcccgatcttggctcgctgcagcctccgcctcccgggttcgagcggttctcctgcctcagcctcttgagtggctgggattgcaggcgcccgccaccgcacccagctaattttttatttttggtagagggggtttcgccgtgttgaccagtctggtctcgaactcctgacctcaggtggtccgtctgccttggccttccaa End editing Edited EST: DW410422, type: ag Aligns to: chr11:2899222-2899539 (-+) All mismatches: ag (16), ga (17), ag (92), ag (104), ag (148), ag (152), ag (160), ag (165), ag (174), ag (188), ag (217), ag (219), ag (222), ag (223), ag (224), ag (229), ag (233), ag (245), ag (255), ag (256), ag (261), ag (265), ag (277), ag (278), ag (287), ag (288), ag (296), ag (297), ag (308), tc (314), ag (321), ag (325), ag (326), ag (333), Editing mismatches: 32, all mismatches: 34, alignment length: 319, cluster length: 317, total number of As: 99 Locations in RNA: 16 92 104 148 152 160 165 174 188 217 219 222 223 224 229 233 245 255 256 261 265 277 278 287 288 296 297 308 321 325 326 333 Locations in genome: 2899539 2899464 2899452 2899408 2899404 2899396 2899391 2899382 2899368 2899339 2899337 2899334 2899333 2899332 2899327 2899323 2899311 2899301 2899300 2899295 2899291 2899279 2899278 2899269 2899268 2899260 2899259 2899248 2899235 2899231 2899230 2899223 Upstream nucleotide (in genome): n a g c c g c a t a t a a a t c t t a c t t a g a g a c g c a c Upstream nucleotide summary: a: 11, c: 8, g: 5, t: 7, other: 1 Downstream nucleotide (in genome): g g g g g g g g a t c a a a g g c a t g c a g a t a c g g a g c Downstream nucleotide summary: a: 9, c: 5, g: 15, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 4, at: 3, ca: 1, cc: 1, cg: 6, ct: 0, ga: 2, gc: 0, gg: 3, gt: 0, ta: 3, tc: 3, tg: 1, tt: 0, other: 1 >chr11:2899222-2899539 (-) agttgtgccactgtactccagcctgggcgacagtgtgagcgagaccctgtctc-aaaaaaaaaaaaaaaaaaaaaaagtggctgggcgaggtggctcattcctgtactcccagcactttgggaggctgaggcagtcagatcacgaggtcaggagatcaagaccatcctggctaacacggtgaaaccccgtctctaataaaaatacaaaaaattagccagacatggtggtacgtgcctgtaatcccagctacttgggaggctaaggcaggagaatcgcttgaacccgagaggcagaggttgcagtgagccaagatggcac >DW410422:16-334 (+) gattgtgccactgtactccagcctgggcgacagtgtgagcgagaccctgtctcaaaaaaaaaaaaaaaaaaaaaaaggtggctgggcggggtggctcattcctgtactcccagcactttgggaggctgaggcggtcggatcacggggtcgggagatcaggaccatcctggctgacacggtgaaaccccgtctctaataaaagtgcagggaattggccggacatggtggtgcgtgcctgtggtcccggctgcttgggaggctggggcaggagggtcgcttgggcccgagaggcggaggtcgcagtgggccgggatggcgc End editing Edited EST: DW412665, type: ag Aligns to: chr11:73424276-73424582 (-+) All mismatches: ag (43), ag (49), ag (73), ag (108), ag (112), ag (119), ag (148), at (153), ag (173), ag (177), ag (205), ag (209), ag (228), ag (240), ag (249), Editing mismatches: 14, all mismatches: 15, alignment length: 307, cluster length: 207, total number of As: 34 Locations in RNA: 43 49 73 108 112 119 148 173 177 205 209 228 240 249 Locations in genome: 73424556 73424550 73424526 73424491 73424487 73424480 73424451 73424426 73424422 73424394 73424390 73424371 73424359 73424350 Upstream nucleotide (in genome): c a c t c c t t c g c a t g Upstream nucleotide summary: a: 2, c: 6, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): c g t g c g g g g t c g c g Downstream nucleotide summary: a: 0, c: 4, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 0, cc: 3, cg: 2, ct: 1, ga: 0, gc: 0, gg: 1, gt: 1, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr11:73424276-73424582 (-) ggagtgcagtggcgcaatcttggctcactgcaagctccccctcccgggttcacgccattctcctgcctcagcctcctgagtagctgggactaggcacccgccagcatgcccggctaattttttgtgtttttagtagagacggggtttcaccgtgttagccaggatggtcttgatctcctgacctcgtgatccacctgccttggtctcccaaagtgctgggattacaggcgtgagccaccacacccagccctgaaagccaaatgaaaataaatgttttaaggagaagacagttattaactatgccaaa >DW412665:17-323 (+) ggagtgcagtggcgcaatcttggctcgctgcaggctccccctcccgggttcacgccgttctcctgcctcagcctcctgagtagctgggactgggcgcccgccggcatgcccggctaattttttgtgtttttggtagtgacggggtttcaccgtgttggccgggatggtcttgatctcctgacctcgtggtccgcctgccttggtctcccaaggtgctgggattgcaggcgtgggccaccacacccagccctgaaagccaaatgaaaataaatgttttaaggagaagacagttattaactatgccaaa End editing Edited EST: DW421655, type: ag Aligns to: chr11:63407441-63407720 (-+) All mismatches: ag (54), ag (67), ag (91), ag (100), ag (119), ag (130), ag (133), ag (134), ag (143), ag (144), ag (149), ag (199), ag (204), ag (225), ag (234), ag (239), ag (240), Editing mismatches: 17, all mismatches: 17, alignment length: 281, cluster length: 187, total number of As: 54 Locations in RNA: 54 67 91 100 119 130 133 134 143 144 149 199 204 225 234 239 240 Locations in genome: 63407683 63407670 63407646 63407637 63407618 63407607 63407604 63407603 63407594 63407593 63407588 63407538 63407533 63407512 63407503 63407498 63407497 Upstream nucleotide (in genome): t t c c c g c a a a c a c c t g a Upstream nucleotide summary: a: 5, c: 7, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g a g c g c a c a c t t g g c a c Downstream nucleotide summary: a: 4, c: 6, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 0, at: 1, ca: 1, cc: 1, cg: 4, ct: 1, ga: 1, gc: 1, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr11:63407441-63407720 (-) agtcattaaaaaggataaggtagaggccgggtgcggtagctcacgcttgtaatcccagtttgggaggccgaggcaggcagatcacctgaggtcgggagttccagaccagcctgaccaacatggagaaaccccatcgctactaaaaatacaaaattagctgggcatggtgacacatgcctgtaatcccagctacttgggtgactgaggcaggagaattacttgaacccgggaggtggaggttgcagtgagctgagatcgcg-ccattgtactccagcctggg >DW421655:17-297 (+) agtcattaaaaaggataaggtagaggccgggtgcggtggctcacgcttgtgatcccagtttgggaggccgaggcgggcagatcgcctgaggtcgggagttccggaccagcctggccggcatggagaggccccgtcgctactaaaaatacaaaattagctgggcatggtgacacatgcctgtagtcccggctacttgggtgactgaggcgggagaattgcttgggcccgggaggtggaggttgcagtgagctgagatcgcggccattgtactccagcctggg End editing Edited EST: DW429353, type: ag Aligns to: chr11:101971884-101972271 (-+) All mismatches: ag (183), ag (193), ag (198), ag (199), ag (218), ag (219), ag (223), ag (245), ag (258), tc (298), ag (301), ag (303), ag (315), ag (339), ag (340), ag (347), ag (352), ag (353), ag (370), ag (378), ag (392), Editing mismatches: 20, all mismatches: 21, alignment length: 388, cluster length: 210, total number of As: 41 Locations in RNA: 183 193 198 199 218 219 223 245 258 301 303 315 339 340 347 352 353 370 378 392 Locations in genome: 101972105 101972095 101972090 101972089 101972070 101972069 101972065 101972043 101972030 101971987 101971985 101971973 101971949 101971948 101971941 101971936 101971935 101971918 101971910 101971896 Upstream nucleotide (in genome): g c c a c a g g t t g c g a g c a c c t Upstream nucleotide summary: a: 4, c: 7, g: 6, t: 3, other: 0 Downstream nucleotide (in genome): t c a c a g g g c g g c a c c a g g g c Downstream nucleotide summary: a: 4, c: 7, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 2, at: 0, ca: 3, cc: 2, cg: 2, ct: 0, ga: 1, gc: 1, gg: 3, gt: 1, ta: 0, tc: 2, tg: 1, tt: 0, other: 0 >chr11:101971884-101972271 (-) atctcacttgtaacatattcatgttgtaaaggatcttacgaactgatgtcttgactcctacctgaaagctgacaattaatctcttaagcagtgattccaatttgtttgtaatttttttttttttttgatgtggagtctgtcacccaggctggagtgcagtggtgtgatcttggctcactgcaacctccacctcctgggttcaagcgagtcttctgcctcagccttctgagtagctgggactacaggcatgtgccatcatgcctgactaatttttctaattttgtagagatgaggtttcaccatgttggccaggctggtcttgaactcctgacctcaagtgatccacctgcctcagcctcccagagtgctggcattacaggcgtgagcc >DW429353:17-404 (+) atctcacttgtaacatattcatgttgtaaaggatcttacgaactgatgtcttgactcctacctgaaagctgacaattaatctcttaagcagtgattccaatttgtttgtaatttttttttttttttgatgtggagtctgtcacccaggctggagtgcagtggtgtggtcttggctcgctgcggcctccacctcctgggttcgggcgggtcttctgcctcagccttctgggtagctgggactgcaggcatgtgccatcatgcctgactaatttttctaatttcgtggggatgaggtttcgccatgttggccaggctggtcttgggctcctggcctcgggtgatccacctgcctcggcctcccggagtgctggcattgcaggcgtgagcc End editing Edited EST: DW436469, type: ag Aligns to: chr11:66723259-66723495 (-+) All mismatches: ag (31), ag (75), ag (93), ag (104), ag (108), ag (131), ag (144), ag (147), ag (153), ag (157), ag (163), ag (172), ag (192), ag (195), ag (196), ag (203), ag (206), Editing mismatches: 17, all mismatches: 17, alignment length: 236, cluster length: 176, total number of As: 49 Locations in RNA: 31 75 93 104 108 131 144 147 153 157 163 172 192 195 196 203 206 Locations in genome: 66723481 66723437 66723419 66723408 66723404 66723381 66723368 66723365 66723359 66723355 66723349 66723340 66723320 66723317 66723316 66723309 66723306 Upstream nucleotide (in genome): c a a t c a c g g c a a c t a g c Upstream nucleotide summary: a: 6, c: 6, g: 3, t: 2, other: 0 Downstream nucleotide (in genome): c c t g g t g g g g t c g a g t c Downstream nucleotide summary: a: 1, c: 4, g: 8, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 3, ca: 0, cc: 2, cg: 4, ct: 0, ga: 0, gc: 0, gg: 2, gt: 1, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr11:66723259-66723495 (-) gaggcgggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccttctctgctaaaaatacaaaaactagccaggcctggtggcgggcacctgtaatcccagctactcaggaggctgaggcaggagaattgcttgaacctgggagttgaaggttgcagtaagctgagatcacgcccctgcactccagcctgggcgacagcatgaaactccctgtcaaa >DW436469:17-252 (+) gaggcgggtggatcgcctgaggtcaggagttcgagaccagcctggccaacatggtgaagccccttctctgctaaaagtacaaaaactggccgggcctggtggcgggcacctgtagtcccagctactcggggggctggggcgggagagttgcttgagcctgggagttgaaggttgcggtgggctgaggtcgcgcccctgcactccagcctgggcgacagcatgaaactccctg-caaa End editing Edited EST: BX506879, type: ag Aligns to: chr11:132970277-132971016 (-+) All mismatches: ag (4), ag (22), ag (28), ag (29), ag (30), ag (46), ag (53), ag (59), ag (69), ag (82), ag (86), ag (92), ag (101), ag (105), ag (125), ag (135), Editing mismatches: 16, all mismatches: 16, alignment length: 741, cluster length: 132, total number of As: 37 Locations in RNA: 4 22 28 29 30 46 53 59 69 82 86 92 101 105 125 135 Locations in genome: 132971013 132970995 132970989 132970988 132970987 132970971 132970964 132970958 132970948 132970935 132970931 132970925 132970916 132970912 132970892 132970882 Upstream nucleotide (in genome): a a a a a c c t t g c a a c g c Upstream nucleotide summary: a: 7, c: 5, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): c t a a t g c g c g g t c g g t Downstream nucleotide summary: a: 2, c: 4, g: 6, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 0, at: 3, ca: 0, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr11:132970277-132971016 (-) gaaaccccgtctctactaaaaatacaaaaattagcggggcatgacagtgggcacctgtagtcccagctactcgggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagccgagatcatgccactgcactccagcctgggcgacagagcaagactccgttcaaaaagaaataaataaaaataaaataaaaataacacattgttgtatccaaggtcatctaggcttctcctttgttatctcctgggcgttttatagtttcgtattttacatctgggcctatgatctattttcacttccttttggcaaaaggtataaggattatgtctgcattcatttttgtaatatgtgcatgtctagttgttccagcatgattcattgaggactatctttactccattgtattgcctttggtcttctgtcatggatcagtttactgtatttgtgtgtgcctatttctgggctctctattctgttctattgatctatttgtctgttctaataccaatatcacagtcttgattactgtagcttcgtagtaagtcttgaagtcaggtagtgtcagtcctccaactttgtttttctccttcaatattgagttaactattctggtttgttttcctcttcatataaattttagagtcatttttt-cagtatttgcaaaataactttgcaaaataacttgctggtattttgtttgggattgtgtttaatctatacattaag >BX506879:1-741 (+) gaagccccgtctctactaaaagtacaagggttagcggggcatgacggtgggcgcctgtggtcccagctgctcgggaggctggggcgggagagtcgcttgagcccgggaggcggaggttgcagtgggccgagatcgtgccactgcactccagcctgggcgacagagcaagactccgttcaaaaagaaataaataaaaataaaataaaaataacacattgttgtatccaaggtcatctaggcttctcctttgttatctcctgggcgttttatagtttcgtattttacatctgggcctatgatctattttcacttccttttggcaaaaggtataaggattatgtctgcattcatttttgtaatatgtgcatgtctagttgttccagcatgattcattgaggactatctttactccattgtattgcctttggtcttctgtcatggatcagtttactgtatttgtgtgtgcctatttctgggctctctattctgttctattgatctatttgtctgttctaataccaatatcacagtcttgattactgtagcttcgtagtaagtcttgaagtcaggtagtgtcagtcctccaactttgtttttctccttcaatattgagttaactattctggtttgttttcctcttcatataaattttagagtcatttttttcagtatttgcaaaataactttgcaaaanaacttgctggtattttgnttgggattgngtttaatctatacattaag End editing Edited EST: BF905681, type: ag Aligns to: chr11:72519907-72520199 (-+) All mismatches: ag (81), ct (84), ag (85), ag (92), ga (95), ag (108), ag (130), ag (177), ag (198), ag (202), ag (203), ag (204), ag (205), ag (212), ag (213), ag (216), ag (243), ag (256), ag (269), ag (288), ag (291), ag (304), Editing mismatches: 20, all mismatches: 22, alignment length: 292, cluster length: 224, total number of As: 59 Locations in RNA: 81 85 92 108 130 177 198 202 203 204 205 212 213 216 243 256 269 288 291 304 Locations in genome: 72520199 72520195 72520188 72520172 72520150 72520103 72520082 72520078 72520077 72520076 72520075 72520068 72520067 72520064 72520037 72520024 72520011 72519992 72519989 72519976 Upstream nucleotide (in genome): n c g a a a t a a a a a a t a c c c g c Upstream nucleotide summary: a: 10, c: 5, g: 2, t: 2, other: 1 Downstream nucleotide (in genome): g g t t g c c a a a t a t g t g g g g g Downstream nucleotide summary: a: 4, c: 2, g: 9, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 1, at: 4, ca: 0, cc: 0, cg: 5, ct: 0, ga: 0, gc: 0, gg: 1, gt: 1, ta: 0, tc: 1, tg: 1, tt: 0, other: 1 >chr11:72519907-72520199 (-) agccaggcacgatggctcacacctgtaatcccagcactttgggaggtcaaggcgggcggatcatctgaggtcaggagtttgagaccagcctgactaacgtggtgaaaccccgtctctactaaaaatacaaaaattagccggatgtggtggcgcacgcctgtaatcccagctattcaggaggctgaggcaggagaatcgcttgaacccaggaggtggagtttgcagtgagccgagattgtgccattgcattccagcctgggtgacagaatgagactgtctcaaaaaaaaattaa >BF905681:81-372 (+) ggctgggcacggtgactcacacctgtagtcccagcactttgggaggtcagggcgggcggatcatctgaggtcaggagtttgagaccagcctgactagcgtggtgaaaccccgtctctgctaggggtacaaaggttggccggatgtggtggcgcacgcctgtagtcccagctattcgggaggctgaggcgggagaatcgcttgaacccggggggtggagtttgcggtgagccgagattgtgccattgcattccagcctgggtgacagaatgagactgtctcaaaaaaaa-ttaa End editing Edited EST: BE045398, type: ga Aligns to: chr11:113295080-113295406 (-+) All mismatches: ga (193), ga (201), ga (206), ga (226), ga (250), ga (253), ga (259), ga (265), ga (271), ga (291), ga (296), ga (298), ga (306), ga (309), ga (330), ga (334), ga (343), ga (349), ga (352), ga (361), ga (364), ga (373), ga (378), ga (384), ga (396), ga (399), ga (405), ga (406), Editing mismatches: 28, all mismatches: 28, alignment length: 326, cluster length: 215, total number of Gs: 59 Locations in RNA: 193 201 206 226 250 253 259 265 271 291 296 298 306 309 330 334 343 349 352 361 364 373 378 384 396 399 405 406 Locations in genome: 113295295 113295287 113295282 113295262 113295238 113295235 113295229 113295223 113295217 113295197 113295192 113295190 113295182 113295179 113295158 113295154 113295145 113295139 113295136 113295127 113295124 113295115 113295110 113295104 113295092 113295089 113295082 113295081 Upstream nucleotide (in genome): c c a t c t c c c t c c c t t c c g c c c g t g t a t g Upstream nucleotide summary: a: 2, c: 14, g: 4, t: 8, other: 0 Downstream nucleotide (in genome): g g a c c t t g t t c a c c a t c c a t c t c g g g g g Downstream nucleotide summary: a: 4, c: 9, g: 8, t: 7, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 2, cc: 5, cg: 3, ct: 4, ga: 0, gc: 1, gg: 2, gt: 1, ta: 1, tc: 3, tg: 2, tt: 2, other: 0 >chr11:113295080-113295406 (-) agagcctggccacccagtggctccaccgccctgatggatccactgaatctgtcctggtatgatgatgatctggagaggcagaactggagccggcccttcaacgggtcagacgggaaggcggacagaccccactacaactactatgccacactgctcaccctgctcatcgctgtcatcgtcttcggcaacgtgctggtgtgcatggctgtgtcccgcgagaaggcgctgcagaccaccaccaactacctgatcgtcagcctcgcagtggccgacctcctcgtcgccacactggtcatgccctgggttgtctacctggaggtaggtggg >BE045398:82-407 (+) agagcctggccacccagtggctccaccgccctgatggatccactgaatctgtcctggtatgatgatgatctggagaggcanaactggagccggcccttcaacgggtcagacaggaaggcagacaaaccccactacaactactataccacactgctcaccctgctcatcactatcatcatcttcagcaacatgctggtgtgcatggctgtatcccacaagaaggcactacanaccaccaccaactacctaatcatcagcctcacagtgaccaacctcctcatcaccacactgatcataccctgagttgtctacctagaagtag-taag End editing Edited EST: DA857874, type: ag Aligns to: chr12:10324193-10324731 (-+) All mismatches: ag (27), ag (35), ag (41), ag (48), ag (55), ag (74), ag (75), ag (107), ag (124), ag (129), ag (134), ag (137), ag (177), ag (185), ag (190), ag (201), ag (204), ag (212), ag (215), ag (239), ag (240), ag (251), ag (258), ag (270), ag (277), ag (282), ag (311), ag (314), ag (321), ag (351), ag (356), ag (374), ag (393), ag (395), ag (418), ag (434), ag (443), ag (465), ag (466), ag (489), ag (492), ag (513), ag (519), ag (530), ag (537), Editing mismatches: 45, all mismatches: 45, alignment length: 539, cluster length: 511, total number of As: 186 Locations in RNA: 27 35 41 48 55 74 75 107 124 129 134 137 177 185 190 201 204 212 215 239 240 251 258 270 277 282 311 314 321 351 356 374 393 395 418 434 443 465 466 489 492 513 519 530 537 Locations in genome: 10324705 10324697 10324691 10324684 10324677 10324658 10324657 10324625 10324608 10324603 10324598 10324595 10324555 10324547 10324542 10324531 10324528 10324520 10324517 10324493 10324492 10324481 10324474 10324462 10324455 10324450 10324421 10324418 10324411 10324381 10324376 10324358 10324339 10324337 10324314 10324298 10324289 10324267 10324266 10324243 10324240 10324219 10324213 10324202 10324195 Upstream nucleotide (in genome): c c t a a a a g a a t t t a t a a t a a a t t a a t t a t t t t a t t c a c a t t t a t a Upstream nucleotide summary: a: 20, c: 4, g: 1, t: 20, other: 0 Downstream nucleotide (in genome): c t g t a a g a g a c g g a a g t g a a t c c a g t t c t t t t t a c g c a c a a c a t t Downstream nucleotide summary: a: 14, c: 9, g: 9, t: 13, other: 0 Dinucleotide summary: aa: 8, ac: 3, ag: 4, at: 5, ca: 1, cc: 1, cg: 1, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 4, tc: 5, tg: 4, tt: 7, other: 0 >chr12:10324193-10324731 (-) agtttgttgaagttcgtgactgcttcactctctcattcttagcttgaatttggaaatgacttttgatgacctaaagatccagactgtgaaggaccagcctgatgagaagtcaaatggaaaaaaagctaaaggtactagggatgggaaaatgtgtacagggaaagaatcccagtgttagccccaaaatgtaaattcaccgaagaatgggattagaaagctaaacacccaagtatgggaaaatagaattaataccatttacttaaaagaaaaacaagaaggctataatgatgatgatgatgacaacttatttataacaatttatactgagtatttactacaggttattctatatgttattcactttcagagtattatttctcagaatcttcgcaataacattttgagattggtactattactatctcccttttacagagagctaactgggcatcaggaggactaacaacatcatccagtttcacggagctaataagtggtagagctaggactgtaccacaaactcccatttatccagaatt >DA857874:1-539 (+) agtttgttgaagttcgtgactgcttcgctctctcgttcttggcttgagtttggagatgacttttgatgacctagggatccagactgtgaaggaccagcctgatgaggagtcaaatggaaaaaaggctagaggtgctggggatgggaaaatgtgtacagggaaagaatcccagtgttggccccaagatgtgaattcaccgaggagtgggattggagagctaaacacccaagtatgggaaggtagaattaatgccatttgcttaaaagaaagacaagagggctgtaatgatgatgatgatgacaacttatttgtagcaatttgtactgagtatttactacaggttattctatgtgttgttcactttcagagtattgtttctcagaatcttcgcagtgacattttgagattggtactattgctatctcccttttacggagagctagctgggcatcaggaggactaacggcatcatccagtttcacggagctgatgagtggtagagctaggactgtgccacagactcccatttgtccagagtt End editing Edited EST: DW414919, type: ag Aligns to: chr12:57729336-57729634 (-+) All mismatches: ag (16), ag (17), ag (89), ag (91), ag (137), ag (145), ag (146), ag (161), ag (165), ag (166), ag (168), ag (169), ag (188), ag (189), ag (190), ag (191), ag (192), ag (195), ag (199), ag (200), ag (201), ag (205), ag (213), ag (221), ag (231), ag (296), ca (305), ag (307), Editing mismatches: 27, all mismatches: 28, alignment length: 299, cluster length: 292, total number of As: 81 Locations in RNA: 16 17 89 91 137 145 146 161 165 166 168 169 188 189 190 191 192 195 199 200 201 205 213 221 231 296 307 Locations in genome: 57729634 57729633 57729561 57729559 57729513 57729505 57729504 57729489 57729485 57729484 57729482 57729481 57729462 57729461 57729460 57729459 57729458 57729455 57729451 57729450 57729449 57729445 57729437 57729429 57729419 57729354 57729343 Upstream nucleotide (in genome): n a t t c c a a t a t a a a a a a a a a a t t c t c t Upstream nucleotide summary: a: 14, c: 4, g: 0, t: 8, other: 1 Downstream nucleotide (in genome): a g t a g a g c a t a g a a a a a a a a g g t c g a g Downstream nucleotide summary: a: 14, c: 2, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 8, ac: 1, ag: 4, at: 1, ca: 2, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 3, tc: 0, tg: 3, tt: 2, other: 1 >chr12:57729336-57729634 (-) aagccatcctcctgcttcagcttcccaaattgctgggtttgcaacggtgagccaccatgcctggctaacacctataatctcaacactttgggaggccgacatgggaagatcttgtgaggccaggagttcaaggccagcctgggcaacctaataagaacctgtccctaccaaaaaaaaaaaaaaaaagttagctgggtatggtggcacctgcctgtagtcccagctatttgggaggctgaggcaggaggattggttgagcccaggagttcaaagttgcagcaagctgtgactaggccact >DW414919:16-314 (+) gggccatcctcctgcttcagcttcccaaattgctgggtttgcaacggtgagccaccatgcctggctaacacctgtgatctcaacactttgggaggccgacatgggaagatcttgtgaggccgggagttcggggccagcctgggcagcctggtgggaacctgtccctaccaaagggggaagaaaggggttggctgggtgtggtggcgcctgcctgtggtcccagctatttgggaggctgaggcaggaggattggttgagcccaggagttcaaagttgcagcgagctgtgaatgggccact End editing Edited EST: DW428804, type: ag Aligns to: chr12:49402951-49403214 (-+) All mismatches: ag (10), ag (11), ag (14), ag (15), ag (16), ag (56), ag (57), ag (91), ag (99), ag (100), ag (102), ag (110), ag (114), ag (118), ag (121), ag (135), ag (138), ag (142), ag (145), ag (147), ag (152), ag (160), ag (162), ag (178), ag (184), ag (192), ag (195), ag (211), ta (213), ag (219), ag (245), Editing mismatches: 30, all mismatches: 31, alignment length: 266, cluster length: 235, total number of As: 79 Locations in RNA: 10 11 14 15 16 56 57 91 99 100 102 110 114 118 121 135 138 142 145 147 152 160 162 178 184 192 195 211 219 245 Locations in genome: 49403213 49403212 49403210 49403209 49403208 49403168 49403167 49403133 49403125 49403124 49403122 49403114 49403110 49403106 49403103 49403089 49403086 49403082 49403079 49403077 49403072 49403064 49403062 49403046 49403040 49403032 49403029 49403013 49403005 49402979 Upstream nucleotide (in genome): c a c a a t a c c a g c a c c t a a t a t c t t c c g a g g Upstream nucleotide summary: a: 10, c: 10, g: 4, t: 6, other: 0 Downstream nucleotide (in genome): a c a a g a t g a g c g c g a c a a a a g t g g g g g t g g Downstream nucleotide summary: a: 10, c: 4, g: 13, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 2, ag: 2, at: 2, ca: 4, cc: 0, cg: 5, ct: 1, ga: 0, gc: 1, gg: 3, gt: 0, ta: 2, tc: 1, tg: 3, tt: 0, other: 0 >chr12:49402951-49403214 (-) caa-caaagtagaaaataggagagaaggtgcagtggctcatacctgtaatcccagcactttgggagactgaggcgggaggccaggagttcaagaccagctcagcaacacagcaagaccctgtctctacaaaaaaataaaaattagccaggcatagtggcatacacttgtagtcccagctactcaggaggctgagataggagaattgcttgagcccagaaggtcaaggctgcaggtgagccatgatctcgccattgta-ctccagcc >DW428804:9-274 (+) cggccggggtagaaaataggagagaaggtgcagtggctcatacctgtggtcccagcactttgggagactgaggcgggaggccgggagttcggggccagctcggcagcacggcgagaccctgtctctgcagaaagatgagaattggccaggcgtggtggcatacacttgtggtcccggctactcggggggctgagataggagagtagcttgggcccagaaggtcaaggctgcaggtgggccatgatctcgccattgtaactccagcc End editing Edited EST: DW435460, type: ag Aligns to: chr12:121772986-121773227 (-+) All mismatches: ag (16), ag (35), ag (40), ag (45), ag (53), ag (54), ag (96), ag (104), ag (112), ag (134), ag (148), ag (175), ag (176), Editing mismatches: 13, all mismatches: 13, alignment length: 242, cluster length: 161, total number of As: 49 Locations in RNA: 16 35 40 45 53 54 96 104 112 134 148 175 176 Locations in genome: 121773225 121773206 121773201 121773196 121773188 121773187 121773145 121773137 121773129 121773107 121773093 121773066 121773065 Upstream nucleotide (in genome): g c g c c a a a c t c g a Upstream nucleotide summary: a: 4, c: 5, g: 3, t: 1, other: 0 Downstream nucleotide (in genome): g c g g a g a a g g g a c Downstream nucleotide summary: a: 4, c: 2, g: 7, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 0, ca: 1, cc: 1, cg: 3, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr12:121772986-121773227 (-) ggaggccaaggcgggtggatcacgtgaggtcaggagttcaagaccagcctggccaaaatggtgaaaccccatctctactaaaaatacaaaaattagccaggtgtggtggcaggcacctgtagtcccagctactcaggagactgaggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccgagagcacgccattgcactccagcctgggcaacaagagtgaaactccgtctc >DW435460:14-255 (+) gggggccaaggcgggtggatcgcgtggggtcgggagttcgggaccagcctggccaaaatggtgaaaccccatctctactaaagatacaaagattagccgggtgtggtggcaggcacctgtggtcccagctactcgggagactgaggcaggagaatcgcttgggcccgggaggtggaggttgcagtgagccgagagcacgccattgcactccagcctgggcaacaagagtgaaactccgtctc End editing Edited EST: DW465296, type: ag Aligns to: chr12:120926330-120926672 (-+) All mismatches: ag (16), ag (32), ag (34), ag (35), ag (54), ag (84), ag (130), ag (136), ag (156), ag (178), ag (185), ag (190), ag (199), ag (217), ag (218), ag (240), Editing mismatches: 16, all mismatches: 16, alignment length: 343, cluster length: 225, total number of As: 41 Locations in RNA: 16 32 34 35 54 84 130 136 156 178 185 190 199 217 218 240 Locations in genome: 120926672 120926656 120926654 120926653 120926634 120926604 120926558 120926552 120926532 120926510 120926503 120926498 120926489 120926471 120926470 120926448 Upstream nucleotide (in genome): n c c a c t t t c a g c c a a a Upstream nucleotide summary: a: 5, c: 6, g: 1, t: 3, other: 1 Downstream nucleotide (in genome): t c a c a g t g t c c g c a g c Downstream nucleotide summary: a: 3, c: 6, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 1, at: 0, ca: 2, cc: 2, cg: 1, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 0, tg: 2, tt: 1, other: 1 >chr12:120926330-120926672 (-) atgatcttggctcaccacaacctccgcctcctgggttcaagcaatcctcctgtctcagcctcctcagtaggtgggattaccggcatgcaccaccacatcgggctaattttttgtatttttagttgacatggggtttctccatgttggtcaggctggccttgaactcccgacctcaggtgatccacccgcctcggcctcccaaagtgctgggattacctgcgtgaaccaccgcaccctgcatcattttttcagcagacatttgttgagcacctgcttgatacaaggcacccatctaggcacaagggacatgaaaggaagcgagtcagacacagttcctatcctt >DW465296:16-358 (+) gtgatcttggctcaccgcggcctccgcctcctgggttcgagcaatcctcctgtctcagcctcctcagtgggtgggattaccggcatgcaccaccacatcgggctaattttttgtgtttttggttgacatggggtttctccgtgttggtcaggctggccttgagctcccggcctcgggtgatccgcccgcctcggcctcccagggtgctgggattacctgcgtgagccaccgcaccctgcatcattttttcagcagacatttgttgagcacctgcttgatacaaggcacccatctaggcacaagggacatgaaaggaagcgagtcagacacagttcctatcctt End editing Edited EST: BX481466, type: ag Aligns to: chr12:95767041-95767536 (-+) All mismatches: ga (10), ag (11), ag (13), ag (28), ag (41), ag (53), ag (54), ag (60), ag (61), ag (62), ag (91), ag (92), ag (101), ag (105), ag (108), ag (119), ag (121), ag (127), ag (140), ag (144), ag (146), ag (158), ag (161), ag (162), ag (167), ag (194), ag (212), ag (213), gc (498), Editing mismatches: 27, all mismatches: 29, alignment length: 496, cluster length: 203, total number of As: 64 Locations in RNA: 11 13 28 41 53 54 60 61 62 91 92 101 105 108 119 121 127 140 144 146 158 161 162 167 194 212 213 Locations in genome: 95767534 95767532 95767517 95767504 95767492 95767491 95767485 95767484 95767483 95767454 95767453 95767444 95767440 95767437 95767426 95767424 95767418 95767405 95767401 95767399 95767387 95767384 95767383 95767378 95767351 95767333 95767332 Upstream nucleotide (in genome): g g c c a a a a a t a c c g a g c c c g a c a c c c a Upstream nucleotide summary: a: 10, c: 11, g: 5, t: 1, other: 0 Downstream nucleotide (in genome): g c t t a t a a t a t c g g g g c g g g c a g c a a a Downstream nucleotide summary: a: 8, c: 5, g: 9, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 2, at: 3, ca: 3, cc: 3, cg: 3, ct: 2, ga: 0, gc: 1, gg: 4, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr12:95767041-95767536 (-) cgagaccagcctggccaacatggtgaaaccccatctataataaaaatacaaaaattcgctgggcatggtggcacatgcctgtaatcctagccactcaggaggctgaggcaagagaatcacttgaacctggcaggcagaggttgcagtgaaccaagatcacgctgttgcactgcagcctggacgacaaagcaagactccgtctcaaaaaaaaaaaaagaaagaaatgtttggcatgaaaaaccatttcctaagtgtcagacatctatctgtgaattatgtgtatggctccaaaagtagaagactcagtggtatgcttgttacaattgttagtgttttggtatgctggagttagcccatcagatattcatgtgaaagctcacactactgggagaaaattaaacaaacaaaaatctaccttgaaaatgtcatgccttaacattctcctttggaaatactgtacaaagataatataaaacatctaaaaataacgcatatt >BX481466:9-504 (+) cagggccagcctggccaacgtggtgaaaccccgtctataataaaggtacaagggttcgctgggcatggtggcacatgcctgtggtcctagccgctcggggggctgaggcaggggaatcgcttgaacctggcgggcgggggttgcagtgagccgggatcgcgctgttgcactgcagcctggacgacgaagcaagactccgtctcggaaaaaaaaaaagaaagaaatgtttggcatgaaaaaccatttcctaagtgtcagacatctatctgtgaattatgtgtatggctccaaaagtagaagactcagtggtatgcttgttacaattgttagtgttttggtatgctggagttagcccatcagatattcatgtgaaagctcacactactgggagaaaattaaacaaacaaaaatctaccttgaaaatgtcatgccttaacattctcctttggaaatactgtacaaagataatataaaacatctaaaaataacccatatt End editing Edited EST: BG539353, type: ag Aligns to: chr12:69317946-69318151 (-+) All mismatches: ag (1), ag (7), ag (17), ag (34), ag (43), ag (45), ag (49), ag (57), ag (60), ag (69), ag (81), ag (82), ag (96), ag (105), ag (110), ag (118), ag (119), ag (120), ag (132), Editing mismatches: 19, all mismatches: 19, alignment length: 206, cluster length: 132, total number of As: 28 Locations in RNA: 1 7 17 34 43 45 49 57 60 69 81 82 96 105 110 118 119 120 132 Locations in genome: 69318151 69318145 69318135 69318118 69318109 69318107 69318103 69318095 69318092 69318083 69318071 69318070 69318056 69318047 69318042 69318034 69318033 69318032 69318020 Upstream nucleotide (in genome): n t c a t g c t c c g a t c c c a a t Upstream nucleotide summary: a: 4, c: 7, g: 2, t: 5, other: 1 Downstream nucleotide (in genome): g c c t g g g c t g a c a t g a a g c Downstream nucleotide summary: a: 4, c: 5, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 1, ca: 1, cc: 1, cg: 3, ct: 2, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 3, tg: 1, tt: 0, other: 1 >chr12:69317946-69318151 (-) agggttacaggcacccaccattgcgcctggctaatttttggtagagacagggttttaccatgttggccaggctggtctcgaactcctgacctcataatctgcccatctcagcctcccaaagtgctgggattacaggcgtgagccactgcgcccttcctatcacttatcttgtcatgcttacattattccccacaattttaggtttt >BG539353:1-206 (+) ggggttgcaggcacccgccattgcgcctggctagtttttggtggggacggggttttgccgtgttggccgggctggtctcgggctcctgacctcatgatctgcccgtctcggcctcccggggtgctgggattgcaggcgtgagccactgcgcccttcctatcacttatcttgtcatgcttacattattccccacaattttaggtttt End editing Edited EST: AW238983, type: ga Aligns to: chr12:49523278-49523506 (-+) All mismatches: ga (54), ga (62), ga (108), ga (114), ga (126), ga (137), ga (144), ga (156), ga (158), ga (162), ga (192), ga (197), ga (201), ga (204), ga (205), ga (213), ga (220), ga (221), ga (222), ga (225), ga (227), ga (231), ga (234), ga (239), ga (240), ga (255), ga (256), ga (258), ga (260), Editing mismatches: 29, all mismatches: 29, alignment length: 229, cluster length: 207, total number of Gs: 66 Locations in RNA: 54 62 108 114 126 137 144 156 158 162 192 197 201 204 205 213 220 221 222 225 227 231 234 239 240 255 256 258 260 Locations in genome: 49523484 49523476 49523430 49523424 49523412 49523401 49523394 49523382 49523380 49523376 49523346 49523341 49523337 49523334 49523333 49523325 49523318 49523317 49523316 49523313 49523311 49523307 49523304 49523299 49523298 49523283 49523282 49523280 49523278 Upstream nucleotide (in genome): c a g c c t t t g a t c c t g c c g g t t t a t g t g t a Upstream nucleotide summary: a: 4, c: 7, g: 7, t: 11, other: 0 Downstream nucleotide (in genome): t g a g a c a g g g a g c g c t g g c t t t a g a g t a n Downstream nucleotide summary: a: 7, c: 4, g: 11, t: 6, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 0, ca: 1, cc: 1, cg: 3, ct: 2, ga: 2, gc: 2, gg: 2, gt: 1, ta: 3, tc: 1, tg: 4, tt: 3, other: 1 >chr12:49523278-49523506 (-) gcgtgagtgcatctccatccacgttggccaggctggtgtccagattggcaatgcctgctgggagctctactgcctggaacacggcatccagcccgatggccagatgccaagtgacaagaccattgggggaggagatgactccttcaacaccttcttcagtgagacgggcgctggcaagcacgtgccccgggctgtgtttgtagacttggaacccacagtcattggtgag >AW238983:32-260 (+) gcgtgagtgcatctccatccacattggccaagctggtgtccagattggcaatgcctgctgggagctctactgcctgaaacacagcatccagcccaatggccagataccaagtaacaagaccattagaggaagagatgactccttcaacaccttcttcagtaagacaggcactaacaagcacatgccccaaactatatttataaacttaaaacccacagtcattaataaa End editing Edited EST: AW239018, type: ga Aligns to: chr12:91572106-91572364 (-+) All mismatches: ga (148), ga (160), ga (184), ga (188), ga (202), ga (211), ga (224), ga (233), ga (251), ga (253), ga (266), ga (281), ga (284), ga (288), ga (290), ga (296), ga (308), ga (316), ga (318), ga (327), ga (330), ga (336), ga (345), ga (349), ga (350), ga (357), ga (362), ga (367), ga (368), ga (369), ga (373), ga (375), tc (376), ga (377), ga (378), ga (379), ga (382), Editing mismatches: 36, all mismatches: 37, alignment length: 261, cluster length: 233, total number of Gs: 62 Locations in RNA: 148 160 184 188 202 211 224 233 251 253 266 281 284 288 290 296 308 316 318 327 330 336 345 349 350 357 362 367 368 369 373 375 377 378 379 382 Locations in genome: 91572339 91572327 91572303 91572299 91572285 91572276 91572263 91572254 91572236 91572234 91572221 91572206 91572203 91572199 91572197 91572191 91572179 91572171 91572169 91572160 91572157 91572151 91572142 91572138 91572137 91572130 91572125 91572120 91572119 91572118 91572116 91572114 91572112 91572111 91572110 91572107 Upstream nucleotide (in genome): t t t t g c a t t a a t t c c c a t t c t t c t g t t t g g t a t g g t Upstream nucleotide summary: a: 5, c: 6, g: 6, t: 19, other: 0 Downstream nucleotide (in genome): a a c c g t g a a g g a a c a a g t c c t c a g t t a g g t a t g g a c Downstream nucleotide summary: a: 12, c: 7, g: 10, t: 7, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 4, at: 1, ca: 3, cc: 2, cg: 0, ct: 1, ga: 1, gc: 0, gg: 3, gt: 2, ta: 8, tc: 5, tg: 3, tt: 3, other: 0 >chr12:91572106-91572364 (-) aggttccctggttgtgaaaatacatgagataaatcatgaaggccactatcatcctccttctgcttgcacaagtttcctgggctggaccgtttcaacagagaggcttatttgactttatgctagaagatgaggcttctgggataggcccagaagttcctgatgaccgcgacttcgagccctccctaggcccagtgtgccccttccgctgtcaatgccatcttcgagtggtccagtgttctgatttgggt--gagtgggatgc >AW239018:123-383 (+) aggttccctggttgtgaaaatacataagataaatcataaaggccactatcatcctccttctacttacacaagtttcctgagctggaccatttcaacagagaagcttatttaactttatgctagaagataaagcttctgggataagcccagaagttcctaataaccacaacttcaagccctccctaagcccantataccccttccactatcaataccatcttcaagtaatccagtattctaatttaaatctaaacaaaatac End editing Edited EST: AW674479, type: ga Aligns to: chr12:32974287-32974465 (-+) All mismatches: ga (94), ga (100), ga (104), ga (113), ga (117), ga (144), ga (151), ga (163), ga (164), ga (167), ga (168), ga (173), ga (174), ga (179), ga (181), Editing mismatches: 15, all mismatches: 15, alignment length: 179, cluster length: 88, total number of Gs: 22 Locations in RNA: 94 100 104 113 117 144 151 163 164 167 168 173 174 179 181 Locations in genome: 32974374 32974368 32974364 32974355 32974351 32974324 32974317 32974305 32974304 32974301 32974300 32974295 32974294 32974289 32974287 Upstream nucleotide (in genome): t t c t c g t c g c g t g a t Upstream nucleotide summary: a: 1, c: 4, g: 4, t: 6, other: 0 Downstream nucleotide (in genome): t a c t c a c g c g a g a t n Downstream nucleotide summary: a: 4, c: 4, g: 3, t: 3, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 2, cg: 2, ct: 0, ga: 3, gc: 1, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 2, other: 1 >chr12:32974287-32974465 (-) agcaataccaggacgtgccgatgccggaggaaaagagcaaccccaagggcgtggagtggctgtggcattccattgttataaggatgtatctgtccttgatcgccaaaagtgtccgcaactacacacaagaagcatccttaggagctctgcagaacctcacggccggaagtggaccagtg >AW674479:3-181 (+) agcaataccaggacgtgccgatgccggaggaaaagagcaaccccaagggcgtggagtggctgtggcattccattgttataaggatgtatctatccttaatcaccaaaagtatccacaactacacacaagaagcatccttagaagctctacagaacctcacaaccaaaagtaaaccaata End editing Edited EST: AA321169, type: ag Aligns to: chr12:112107126-112107407 (-+) All mismatches: ag (66), ag (99), ag (106), ag (114), ag (127), ag (132), ag (159), ag (171), ag (177), ag (208), ag (213), ag (217), ag (221), ag (238), ag (239), ag (252), gt (260), ag (281), Editing mismatches: 17, all mismatches: 18, alignment length: 281, cluster length: 217, total number of As: 67 Locations in RNA: 66 99 106 114 127 132 159 171 177 208 213 217 221 238 239 252 281 Locations in genome: 112107342 112107309 112107302 112107294 112107281 112107276 112107249 112107237 112107231 112107200 112107195 112107191 112107187 112107169 112107168 112107155 112107126 Upstream nucleotide (in genome): t c a c g c c g c a t c c t a c c Upstream nucleotide summary: a: 3, c: 9, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): a c t c a g a c t a g g t a t g n Downstream nucleotide summary: a: 5, c: 3, g: 4, t: 4, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 2, ca: 1, cc: 2, cg: 3, ct: 2, ga: 1, gc: 1, gg: 0, gt: 0, ta: 2, tc: 0, tg: 1, tt: 0, other: 1 >chr12:112107126-112107407 (-) aataaatcagaaatggtacctttttaagaattgcatatatttttagagacaactattaacacattaagagggaagcaaagccgggcatggtggctcacacctgtaatcccagcacttcgggaggcgaaggcaggcggatcacctgaggtcaggagttcaagaccaacctgaccaacatgaagaaaccccgtctctactaaaaatacaaaattagccaggcatggtggcgtatgcctgtaatcctagctactcaggaggctgaggtagaatcacttgaaccca >AA321169:1-281 (+) aataaatcagaaatggtacctttttaagaattgcatatatttttagagacaactattaacacattgagagggaagcaaagccgggcatggtggctcacgcctgtagtcccagcgcttcgggaggcggaggcgggcggatcacctgaggtcaggagttcgagaccaacctggccaacgtgaagaaaccccgtctctactaaaaatacagaattggccgggcgtggtggcgtatgc-tgtggtcctagctactcgggaggcttaggtagaatcacttgaacccg End editing Edited EST: DB120123, type: ag Aligns to: chr13:22070972-22071525 (-+) All mismatches: ag (44), ag (84), ag (105), ag (106), ag (108), ag (109), ag (130), ag (131), ag (134), ag (144), ag (154), ag (231), ag (425), ag (433), ag (447), ag (449), ag (496), ag (504), ag (521), Editing mismatches: 19, all mismatches: 19, alignment length: 554, cluster length: 478, total number of As: 85 Locations in RNA: 44 84 105 106 108 109 130 131 134 144 154 231 425 433 447 449 496 504 521 Locations in genome: 22071482 22071442 22071421 22071420 22071418 22071417 22071396 22071395 22071392 22071382 22071372 22071295 22071101 22071093 22071079 22071077 22071030 22071022 22071005 Upstream nucleotide (in genome): c t a a c a c a t t c c c c t c t a t Upstream nucleotide summary: a: 5, c: 8, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): c g a c a t a a g c c g g a c g g g g Downstream nucleotide summary: a: 5, c: 5, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 1, ca: 3, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 4, tt: 0, other: 0 >chr13:22070972-22071525 (-) tttttatttatttgtttgtttttacacagagtctcactccatcacccaggctggagtgcagtggcgcgatcttggctcactgtagcctccgcctcacgggtttaaacaattctcctgcctcagccttccaaatagctgggactacaggtgtgcaccaccacacccagctaatttttttttttttttctttttcaccatgttgaccagactggtcttgaactgctgacctcaggtgatctgcctgccttggcctcccaaagtgctaggattagacatgagccacagcacccagcccgtttgtttgtttgtttgttatgtattttttgagacagagtctcgctctgtcgcccaggctggagtgctgtggcgtgatctcggctcactgcaagctctgcctcctgggttcacaccattctcctgcctcagcctcccaagtagctgggactacaggcgcctgccaccacgcccggctaatttttttgtttttgtgtttttagtagagaagggatttcatggtgttagctaggatggtctccatcttcc-gacctcgtgat >DB120123:1-554 (+) tttttatttatttgtttgtttttacacagagtctcactccatcgcccaggctggagtgcagtggcgcgatcttggctcactgtggcctccgcctcacgggtttaggcggttctcctgcctcagccttccggatggctgggactgcaggtgtgcgccaccacacccagctaatttttttttttttttctttttcaccatgttgaccagactggtcttgaactgctgacctcgggtgatctgcctgccttggcctcccaaagtgctaggattagacatgagccacagcacccagcccgtttgtttgtttgtttgttatgtattttttgagacagagtctcgctctgtcgcccaggctggagtgctgtggcgtgatctcggctcactgcaagctctgcctcctgggttcacaccattctcctgcctcggcctcccgagtagctgggactgcgggcgcctgccaccacgcccggctaatttttttgtttttgtgtttttggtagagaggggatttcatggtgttggctaggatggtctccatct-cctgacctcgtgat End editing Edited EST: DW426341, type: ag Aligns to: chr13:41510606-41510871 (-+) All mismatches: ag (17), ag (48), ag (53), ag (54), ag (67), ag (78), ag (91), ag (100), ag (103), ag (113), ag (145), ag (165), ag (167), ag (169), ag (181), ca (225), ag (228), ag (242), ag (243), ag (249), ag (255), ag (257), ag (261), ag (264), Editing mismatches: 23, all mismatches: 24, alignment length: 266, cluster length: 248, total number of As: 50 Locations in RNA: 17 48 53 54 67 78 91 100 103 113 145 165 167 169 181 228 242 243 249 255 257 261 264 Locations in genome: 41510871 41510840 41510835 41510834 41510821 41510810 41510797 41510788 41510785 41510775 41510743 41510723 41510721 41510719 41510707 41510660 41510646 41510645 41510639 41510633 41510631 41510627 41510624 Upstream nucleotide (in genome): n c c a c c c c c t c a t g c c a a t t c c g Upstream nucleotide summary: a: 4, c: 12, g: 2, t: 4, other: 1 Downstream nucleotide (in genome): g c a g g t g g g c g t g g c c a g g c g t g Downstream nucleotide summary: a: 2, c: 5, g: 13, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 1, ca: 1, cc: 3, cg: 6, ct: 2, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 2, tg: 2, tt: 0, other: 1 >chr13:41510606-41510871 (-) aggctggagtgcagtggcgcgatctcggctcactgcaagctccgcctcccaggttcacgccattctcctgcctcagcctccccagcagctgggactacaggcgcccgccaccacacccgactatgcccagctaatttttgtatttttaatagagatggggtttcaccatgttgaccaggccgtcttgaactctgtaccttgtgatccacccaccttggactcccaaagtgctaggattacaggcatgagccaccgtgcccggccaa >DW426341:17-282 (+) gggctggagtgcagtggcgcgatctcggctcgctgcgggctccgcctcccgggttcacgccgttctcctgcctcggcctccccggcggctgggactgcaggcgcccgccaccacacccgactatgcccggctaatttttgtatttttagtggggatggggtttcgccatgttgaccaggccgtcttgaactctgtaccttgtgatccaaccgccttggactcccagggtgctgggattgcgggcgtgggccaccgtgcccggccaa End editing Edited EST: DA394412, type: ag Aligns to: chr14:100766369-100766885 (-+) All mismatches: ag (38), ag (50), ag (55), ag (74), ag (77), ag (90), ag (94), ag (98), ag (99), ag (319), ag (330), ag (335), ag (341), ag (361), ag (364), ag (365), ag (373), ag (378), ag (390), ag (400), ag (406), ag (427), ag (435), ag (441), ag (444), ag (458), ag (508), Editing mismatches: 27, all mismatches: 27, alignment length: 517, cluster length: 471, total number of As: 125 Locations in RNA: 38 50 55 74 77 90 94 98 99 319 330 335 341 361 364 365 373 378 390 400 406 427 435 441 444 458 508 Locations in genome: 100766848 100766836 100766831 100766812 100766809 100766796 100766792 100766788 100766787 100766567 100766556 100766551 100766545 100766525 100766522 100766521 100766513 100766508 100766496 100766486 100766480 100766459 100766451 100766445 100766442 100766428 100766378 Upstream nucleotide (in genome): t t c c g c g c a t c c a a c a c c t t c a t t t c c Upstream nucleotide summary: a: 5, c: 12, g: 2, t: 8, other: 0 Downstream nucleotide (in genome): c a g g g g g a g g g c c g a t c g g t c t t g g c c Downstream nucleotide summary: a: 3, c: 7, g: 13, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 2, ca: 2, cc: 5, cg: 5, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 1, tg: 4, tt: 2, other: 0 >chr14:100766369-100766885 (-) tagctgggtgtggtggctcatgcctgttgtctcagctacttgggaggctaaggcaggagggtcgattgagcccaggaggtggaggttgcagtgagccaagattatgccactgcactccagtttgggtgacagagtgagatcttgtctcaaaaaacaaaaacaccaaaattacaagttggacaaaaccataccagtcacatgtaaccaaagagaaagcagaactggcaaagttaaagtgagtatcaagtgggttttagggtccaaacttttttttctttttgaaacggagtcttgctctctgggtcgctggagtgcagtagcgcgatctcagctcactgcaacttctgcctcctggattcaagcaattctcccacctcagcctcctgagtagctgggactataggcacccgccaccacacctggctaatttttgtatttttagtagagacggggtttcaccatgttggctaggctggttttgaactcctgatctcaagtgatctgcccaccttggcct >DA394412:1-517 (+) tagctgggtgtggtggctcatgcctgttgtctcagctgcttgggaggctgaggcgggagggtcgattgagcccggggggtggaggttgcggtgggccgggattatgccactgcactccagtttgggtgacagagtgagatcttgtctcaaaaaacaaaaacaccaaaattacaagttggacaaaaccataccagtcacatgtaaccaaagagaaagcagaactggcaaagttaaagtgagtatcaagtgggttttagggtccaaacttttttttctttttgaaacggagtcttgctctctgggtcgctggagtgcagtggcgcgatctcggctcgctgcagcttctgcctcctggattcaggcggttctcccgcctcggcctcctgagtggctgggactgtaggcgcccgccaccacacctggctagtttttgtgtttttggtggagacggggtttcgccatgttggctaggctggttttgaactcctgatctcaagtgatctgcccgccttggcct End editing Edited EST: DW414007, type: ag Aligns to: chr14:21714034-21714334 (-+) All mismatches: ag (73), ag (95), ag (96), ag (104), ag (122), ag (123), ag (126), ag (136), ag (141), ag (144), ag (145), ag (152), ag (202), ag (214), ag (222), ag (240), ag (249), ag (274), ag (275), ag (299), ag (305), Editing mismatches: 21, all mismatches: 21, alignment length: 301, cluster length: 233, total number of As: 52 Locations in RNA: 73 95 96 104 122 123 126 136 141 144 145 152 202 214 222 240 249 274 275 299 305 Locations in genome: 21714278 21714256 21714255 21714247 21714229 21714228 21714225 21714215 21714210 21714207 21714206 21714199 21714149 21714137 21714129 21714111 21714102 21714077 21714076 21714052 21714046 Upstream nucleotide (in genome): c t a c c a c c c g a g c c c a g g a c t Upstream nucleotide summary: a: 5, c: 10, g: 4, t: 2, other: 0 Downstream nucleotide (in genome): g a t a a g g g g a t g t g g a a a c g g Downstream nucleotide summary: a: 7, c: 1, g: 10, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 2, ca: 2, cc: 0, cg: 7, ct: 1, ga: 3, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr14:21714034-21714334 (-) tggtgaatgacagaccacatatattatggccccttaagattataatggagcaggccaggtgtggtggttcacgcctgtaatcccagcaatttgggaggccgaggcaagcagatcccctcaggtcaggaatttgagagcagcctggccaacatggtcaaaccccgtagtcaggcgtggtggtgcacatctgtgttcccagctactcaggaggctgaggtggcaaaatcgcttgaacctgggaggtggaggttgtagtgaactgagactgcgccactgcactccagccttagtgacagaggga >DW414007:17-317 (+) tggtgaatgacagaccacatatattatggccccttaagattataatggagcaggccgggtgtggtggttcacgcctgtggtcccagcgatttgggaggccgaggcgggcggatcccctcgggtcgggggtttgagggcagcctggccaacatggtcaaaccccgtagtcaggcgtggtggtgcacgtctgtgttcccggctactcgggaggctgaggtggcaagatcgcttggacctgggaggtggaggttgtagtgggctgagactgcgccactgcactccggccttggtgacagaggga End editing Edited EST: DW417011, type: ag Aligns to: chr14:39568359-39568621 (-+) All mismatches: ag (26), ag (47), ag (56), ag (71), ag (80), ag (81), ag (92), ag (95), ag (96), ag (97), ag (101), ag (104), ag (105), ag (111), ag (127), ag (133), ag (137), ag (143), ag (147), ag (164), ag (178), ag (179), ag (203), ag (208), ta (255), Editing mismatches: 24, all mismatches: 25, alignment length: 263, cluster length: 183, total number of As: 50 Locations in RNA: 26 47 56 71 80 81 92 95 96 97 101 104 105 111 127 133 137 143 147 164 178 179 203 208 Locations in genome: 39568612 39568591 39568582 39568567 39568558 39568557 39568546 39568543 39568542 39568541 39568537 39568534 39568533 39568527 39568511 39568505 39568501 39568495 39568491 39568474 39568460 39568459 39568435 39568430 Upstream nucleotide (in genome): g c g a a a t t a a t a a t c c t c t c g a g g Upstream nucleotide summary: a: 8, c: 5, g: 5, t: 6, other: 0 Downstream nucleotide (in genome): g g g c a c c a a a c a a g c t g g c g a c g g Downstream nucleotide summary: a: 7, c: 7, g: 9, t: 1, other: 0 Dinucleotide summary: aa: 5, ac: 3, ag: 0, at: 0, ca: 0, cc: 1, cg: 3, ct: 1, ga: 1, gc: 0, gg: 4, gt: 0, ta: 1, tc: 3, tg: 2, tt: 0, other: 0 >chr14:39568359-39568621 (-) gggaggccgaggccggcggatcacgaggtcagacaattgagatcatcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaaattagctgggtatggtggcacgcgcatgtagtcccagctacttgggaggctgaggcaggggaatcgcttgaacccgggaggcagaggttgcagtgagctgagattgccccactgcactccagcctggtgacagagtgagactccgtgtcaaaaaaaaaaaaaaaaaaaaaaa >DW417011:17-279 (+) gggaggccggggccggcggatcacgaggtcggacaattgggatcatcctggccagcatggtgaggccctgtctctgctgggaatgcaggaaattggctgggtatggtggcgcgcgcgtgtggtcccggctgcttgggaggctgaggcgggggaatcgcttgggcccgggaggcagaggttgcagtgggctgggattgccccactgcactccagcctggtgacagagtgagactccgtgacaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: DW420760, type: ag Aligns to: chr14:93212299-93212582 (-+) All mismatches: ag (159), ag (160), ag (165), ag (168), ag (176), ag (195), ag (203), ag (206), ag (211), ag (217), ag (226), ag (227), ag (248), ag (252), ag (256), ag (258), ag (267), ag (283), ag (293), ag (294), ag (299), Editing mismatches: 21, all mismatches: 21, alignment length: 284, cluster length: 141, total number of As: 41 Locations in RNA: 159 160 165 168 176 195 203 206 211 217 226 227 248 252 256 258 267 283 293 294 299 Locations in genome: 93212439 93212438 93212433 93212430 93212422 93212403 93212395 93212392 93212387 93212381 93212372 93212371 93212350 93212346 93212342 93212340 93212331 93212315 93212305 93212304 93212299 Upstream nucleotide (in genome): t a c c g c c g c c c a t a a t t c t a c Upstream nucleotide summary: a: 5, c: 9, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): a t g c g t g g a t a c c a t c g c a t n Downstream nucleotide summary: a: 5, c: 5, g: 5, t: 5, other: 1 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 3, ca: 2, cc: 2, cg: 2, ct: 2, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 2, tg: 1, tt: 0, other: 1 >chr14:93212299-93212582 (-) gtaatccaggaaatgcacattgaaactataattagatcattgtatgttcatcagattaggaattgcaaagtttgacactatcaagagatgataagcgtttgaagaaaatgagattctcgctgggcgcggtggctcgtgcctgtaatcgcagcactttgggaggccgaggcgggcggatcatgacgtcaggagatcaagaccatcctggccaacatggtgaaaccccgtatctactaaaaaatacagaaattagctaggtgtggtggcacgtgcctgtaatccca >DW420760:16-299 (+) gtaatccaggaaatgcacattgaaactataattagatcattgtatgttcatcagattaggaattgcaaagtttgacactatcaagagatgataagcgtttgaagaaaatgagattctcgctgggcgcggtggctcgtgcctgtggtcgcggcgctttggggggccgaggcgggcggatcgtgacgtcgggggatcgagaccgtcctggccggcatggtgaaaccccgtatctgctagaaagtgcagaaattggctaggtgtggtggcgcgtgcctgtggtcccg End editing Edited EST: DW423776, type: ag Aligns to: chr14:36138511-36138785 (-+) All mismatches: ag (16), ag (62), ag (77), ag (114), ag (122), ag (138), ag (140), ag (163), ag (164), ag (165), ag (176), ag (202), ag (203), ag (212), ag (232), ag (248), ag (255), ag (273), ag (280), Editing mismatches: 19, all mismatches: 19, alignment length: 275, cluster length: 265, total number of As: 74 Locations in RNA: 16 62 77 114 122 138 140 163 164 165 176 202 203 212 232 248 255 273 280 Locations in genome: 36138785 36138739 36138724 36138687 36138679 36138663 36138661 36138638 36138637 36138636 36138625 36138599 36138598 36138589 36138569 36138553 36138546 36138528 36138521 Upstream nucleotide (in genome): n c c c c a c a a a t t a t g c c g c Upstream nucleotide summary: a: 5, c: 8, g: 2, t: 3, other: 1 Downstream nucleotide (in genome): g c c g a c t a a a g a t c g g g g c Downstream nucleotide summary: a: 5, c: 5, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 0, at: 1, ca: 1, cc: 3, cg: 3, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 1 >chr14:36138511-36138785 (-) agtttcttcatctataaaataaagatggccaggcatggtggttcacacctgtactcccagcactttgggaggctgaggcgggtggatcacctgaggtcaggagttcaagactagtctgaccaacatggagaaaccccatctctactaaaaatacaaaattagctgggcctggtggcacatgcctgtaatcccagctactggggaggctgacacaggagaatcgcttgaacccaggaggcagagtttgcagtgagccgagatcgcaccattgcact >DW423776:16-290 (+) ggtttcttcatctataaaataaagatggccaggcatggtggttcacgcctgtactcccagcgctttgggaggctgaggcgggtggatcacctgaggtcgggagttcgagactagtctgaccagcgtggagaaaccccatctctactagggatacaaaattggctgggcctggtggcacatgcctgtggtcccagctgctggggaggctgacacaggggaatcgcttgaacccgggaggcggagtttgcagtgagccgggatcgcgccattgcact End editing Edited EST: DW424448, type: ag Aligns to: chr14:103849695-103849965 (-+) All mismatches: ag (17), ag (18), ag (24), ag (86), ag (87), ag (119), ag (123), ag (126), ag (131), tc (149), ag (152), ag (166), ag (185), ag (193), ag (194), ag (201), ag (221), ag (259), Editing mismatches: 17, all mismatches: 18, alignment length: 271, cluster length: 243, total number of As: 69 Locations in RNA: 17 18 24 86 87 119 123 126 131 152 166 185 193 194 201 221 259 Locations in genome: 103849965 103849964 103849958 103849896 103849895 103849863 103849859 103849856 103849851 103849830 103849816 103849797 103849789 103849788 103849781 103849761 103849723 Upstream nucleotide (in genome): n a a c a a a t a t a a g a g g c Upstream nucleotide summary: a: 9, c: 2, g: 3, t: 2, other: 1 Downstream nucleotide (in genome): a t c a c a t a g g g t a c g a a Downstream nucleotide summary: a: 7, c: 3, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 2, at: 3, ca: 2, cc: 0, cg: 0, ct: 0, ga: 2, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 1 >chr14:103849695-103849965 (-) aatcctaacactttgggaggccgaggtgggcggattgcctgagctcaggagtttcagaccagcctggccaacatggtgaaaccccatctctgctaaaatacaaaaaattaaccaagcacggtggtgtgtgcctgtagtcccagctactaaggaggctgaggtgagagaatctcttgaacctgggaggcagagttgaagtgagcgaagatcagcccactgcactccagcctgagcaacagagcaagactgcgtctcaaaaaa-caaaataaag >DW424448:17-287 (+) ggtcctagcactttgggaggccgaggtgggcggattgcctgagctcaggagtttcagaccagcctggccggcatggtgaaaccccatctctgctaaaatacagaaagttgaccaggcacggtggtgtgtgcccgtggtcccagctactagggaggctgaggtgagagagtctcttgggcctggggggcagagttgaagtgagcggagatcagcccactgcactccagcctgagcaacagagcgagactgcgtctcaaaaaaacaaa-taaag End editing Edited EST: BQ640220, type: ag Aligns to: chr14:100635205-100635709 (-+) All mismatches: ag (9), ag (30), ag (36), ag (60), ag (72), ag (77), ag (82), ag (83), ag (90), ag (91), ag (98), ag (99), ag (112), ag (120), ag (122), ag (136), ct (488), Editing mismatches: 16, all mismatches: 17, alignment length: 505, cluster length: 128, total number of As: 30 Locations in RNA: 9 30 36 60 72 77 82 83 90 91 98 99 112 120 122 136 Locations in genome: 100635701 100635680 100635674 100635650 100635638 100635633 100635628 100635627 100635620 100635619 100635612 100635611 100635598 100635590 100635588 100635574 Upstream nucleotide (in genome): t t t a c g c a t a c a c t c c Upstream nucleotide summary: a: 4, c: 6, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g c g g c g a g a g a t t c c a Downstream nucleotide summary: a: 4, c: 4, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 3, at: 1, ca: 3, cc: 2, cg: 0, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr14:100635205-100635709 (-) ataaaattagcctagctgtggtggtgcatacctgtagtcctagctgcttgggaggctgaagtggaaggatcacttgagtccaagagtttaaggctgcaatgagctatgatcatgccactacaccgtagcctgggcaacagagtgagacttcatctcgaaaaaattgaaacactaacaaataaataaataaaataaatttaataggaccttcaggtataactataatttgaaccacagtatagattaagtccatgaagatttgttaatcggtgcattttagcaaatgctaaagttaacttacagcctattttgtttagaggcacaaaagccagtcagtgcccttttaatccttttatgtgaatccttttggtatatgcattttgtcatatatttgttatatatatcatttgtcatatacatttttacatacacattttggatttctaattgggttgaattatggacacttgttttaatttatataatacataatctatttattgta >BQ640220:1-505 (+) ataaaattggcctagctgtggtggtgcatgcctgtggtcctagctgcttgggaggctgaggtggaaggatcgcttgggtccgggagtttggggctgcggtgagctatgatcgtgccactgcgccgtagcctgggcgacagagtgagacttcatctcgaaaaaattgaaacactaacaaataaataaataaaataaatttaataggaccttcaggtataactataatttgaaccacagtatagattaagtccatgaagatttgttaatcggtgcattttagcaaatgctaaagttaacttacagcctattttgtttagaggcacaaaagccagtcagtgcccttttaatccttttatgtgaatccttttggtatatgcattttgtcatatatttgttatatatatcatttgtcatatacatttttacatacacattttggatttctaattgggttgaattatggacacttgttttaatttatataatatataatctatttattgta End editing Edited EST: AA384222, type: ag Aligns to: chr14:74032458-74032763 (-+) All mismatches: ag (142), ag (143), ag (150), ag (151), ag (153), ag (156), ag (170), ag (173), ag (201), ag (212), ag (235), ag (244), ct (265), ag (269), ag (288), ag (301), ag (302), Editing mismatches: 16, all mismatches: 17, alignment length: 307, cluster length: 160, total number of As: 38 Locations in RNA: 142 143 150 151 153 156 170 173 201 212 235 244 269 288 301 302 Locations in genome: 74032622 74032621 74032614 74032613 74032611 74032608 74032594 74032591 74032563 74032552 74032529 74032520 74032495 74032477 74032464 74032463 Upstream nucleotide (in genome): t a t a a c c c c a a t c t c a Upstream nucleotide summary: a: 6, c: 6, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a g a a g g g g c c t c c a a g Downstream nucleotide summary: a: 5, c: 4, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 3, at: 1, ca: 1, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 3, tc: 1, tg: 0, tt: 0, other: 0 >chr14:74032458-74032763 (-) caacactctgtatctaactattctggtggggacgtggagaacttttgtgtctagctgaggaattgtaaacgcaccaatcagtgccctgtcaaaacagacccctgggctctaccaatcagcaggatgtgagtggggccagataagagaataaaagcaggctgccctagccagcagtggcaacccgctggggtcccccttccacactgtggaaactttgttctttcgttctttgcaataaatcttactgctgctcactctttgcgtccacactgcctttatgagct-ctaacactcaccaccaaggtct >AA384222:1-307 (+) caacactctgtatctaactattctggtggggacgtggagaacttttgtntctagctgaggaattgtaaacgcaccaatcagtgccctgtcaaaacagacccctgggctctaccaatcagcaggatgtgagtggggccagatgggagaatggaggcgggctgccctagccggcggtggcaacccgctggggtcccccttccgcactgtggaagctttgttctttcgttctttgcagtaaatcttgctgctgctcactctttgcgttcangntgcctttatgagcttctgacantcaccaccggggtct End editing Edited EST: DB159873, type: ag Aligns to: chr15:72537262-72537849 (-+) All mismatches: ag (152), ag (165), ag (172), ag (198), ag (209), ag (258), ag (268), ag (270), ag (278), ag (317), ag (336), ag (340), ag (391), Editing mismatches: 13, all mismatches: 13, alignment length: 588, cluster length: 240, total number of As: 41 Locations in RNA: 152 165 172 198 209 258 268 270 278 317 336 340 391 Locations in genome: 72537698 72537685 72537678 72537652 72537641 72537592 72537582 72537580 72537572 72537533 72537514 72537510 72537459 Upstream nucleotide (in genome): c t c c a t t c c a t c a Upstream nucleotide summary: a: 3, c: 6, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g t g g g g c g c g g g g Downstream nucleotide summary: a: 0, c: 2, g: 10, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 3, at: 0, ca: 0, cc: 1, cg: 5, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 1, other: 0 >chr15:72537262-72537849 (-) gttatcactatatgatacggtttggctgtgtctccacccagatctcatcttgaattcccatgtgttgtggaagggacccagcgggaggtaactgaatcatgggggcaggtttttatttgtttttgttttgttttgttttgttttttgagacagagtctcactctatcgcccaggctggagtgcagtggcgcggtctcagctcactgcaagctctacctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccacgcccagctgatttttttgtatttttagtagaagtggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatccgcctgccttggcctcccaaagtgctgggattataggtgtgagccactgtgcctggcccatgggggcaggtttttccagtgctgttcttgtcatagtgaataagtctcatgagatctgatagttctataagggggagttttgctgcacaagctctctctttggctgccaccatccatttaagatgtgacttgctcctccttgccttccaccatgattg >DB159873:1-588 (+) gttatcactatatgatacggtttggctgtgtctccacccagatctcatcttgaattcccatgtgttgtggaagggacccagcgggaggtaactgaatcatgggggcaggtttttatttgtttttgttttgttttgttttgttttttgagacggagtctcactctgtcgcccgggctggagtgcagtggcgcggtctcggctcactgcaggctctacctcccgggttcacgccattctcctgcctcagcctcccgagtggctgggactgcgggcgcccgccaccacgcccagctgatttttttgtatttttagtagaggtggggtttcaccatgttggccgggatggtctcgatctcctgacctcgtgatccgcctgccttggcctcccaaggtgctgggattataggtgtgagccactgtgcctggcccatgggggcaggtttttccagtgctgttcttgtcatagtgaataagtctcatgagatctgatagttctataagggggagttttgctgcacaagctctctctttggctgccaccatccatttaagatgtgacttgctcctccttgccttccaccatgattg End editing Edited EST: DW408855, type: ag Aligns to: chr15:56928740-56929073 (-+) All mismatches: ag (14), ag (40), ag (50), ag (64), ag (81), ag (86), ag (87), ag (90), ag (91), ag (100), ag (126), ag (127), ag (143), ag (186), ag (206), ag (220), ag (221), ag (222), ag (235), ag (275), ag (288), ag (303), ag (308), ag (327), Editing mismatches: 24, all mismatches: 24, alignment length: 332, cluster length: 315, total number of As: 93 Locations in RNA: 14 40 50 64 81 86 87 90 91 100 126 127 143 186 206 220 221 222 235 275 288 303 308 327 Locations in genome: 56929068 56929041 56929031 56929017 56929000 56928995 56928994 56928991 56928990 56928981 56928955 56928954 56928938 56928895 56928875 56928861 56928860 56928859 56928846 56928806 56928793 56928778 56928773 56928754 Upstream nucleotide (in genome): g a c t t a a t a t t a g c a t a a t c c a g g Upstream nucleotide summary: a: 9, c: 4, g: 4, t: 7, other: 0 Downstream nucleotide (in genome): g t g g c a a a a g a t g g c a a a g g g c g g Downstream nucleotide summary: a: 8, c: 3, g: 11, t: 2, other: 0 Dinucleotide summary: aa: 5, ac: 2, ag: 0, at: 2, ca: 0, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 4, gt: 0, ta: 3, tc: 1, tg: 3, tt: 0, other: 0 >chr15:56928740-56929073 (-) ggccgaggtgggtggatcatttgaggtcaggaattcacaaccaggctgacaaacatagtgaaaccccatctctactaaaaataaaaaaaattagttgggcatggtggaacatgcctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggagtctgagaccagcctggctaacatggtgaaaccccgtctgtactaaaaatacaaaaattagtcgggcatggtggtgggtacctgtaatcccagctactcagggggctgagacaggagaatcgcttgaacctgagaggtggaggttgtagtgagctgagatcatacc >DW408855:10-341 (+) ggcc-ggg-gggtggatcatttgaggtcaggagttcacaaccgggctgacaaacatggtgaaaccccatctctgctaaggatggaaaaaattggttgggcatggtggaacatgcctgtggtcccagcactttggggggccgaggtgggtggatcacctgaggtcaggagtctgagaccggcctggctaacatggtgaagccccgtctgtactgggaatacaaaaattggtcgggcatggtggtgggtacctgtaatcccagctactcggggggctgagacgggagaatcgcttgagcctgggaggtggaggttgtagtgggctgagatcatacc End editing Edited EST: DW411176, type: ag Aligns to: chr15:72336349-72336666 (-+) All mismatches: ag (14), ag (15), ag (44), ag (54), ag (67), ag (72), ag (76), ag (97), ag (135), ag (136), ag (142), ag (143), ag (174), ag (175), ag (176), ag (188), Editing mismatches: 16, all mismatches: 16, alignment length: 318, cluster length: 175, total number of As: 34 Locations in RNA: 14 15 44 54 67 72 76 97 135 136 142 143 174 175 176 188 Locations in genome: 72336665 72336664 72336635 72336625 72336612 72336607 72336603 72336582 72336544 72336543 72336537 72336536 72336505 72336504 72336503 72336491 Upstream nucleotide (in genome): c a t t c c c t g a c a c a a t Upstream nucleotide summary: a: 5, c: 6, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): a g g c c c g g a c a c a a g c Downstream nucleotide summary: a: 5, c: 6, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 2, at: 0, ca: 3, cc: 2, cg: 1, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 2, tt: 0, other: 0 >chr15:72336349-72336666 (-) caagggattctcctgcctcggcctcctgagtagctgggattacaggcatgtgccaccacacccagctaattttgtatttttagtagagtaggggtttctccatgttggtcaggctggtcttgaactcccaacctcaggtgatccacctgccttggcttcccaaagtgctgggattacaggcatgagccatcgcccccagcctatacgtgaacatttccaagagaagattttaattagtctcattacaaaaaatgataagtattgtgaggtaatgcatacattaagtaggttgattttgccattctacactgcagacat >DW411176:13-330 (+) cgggggattctcctgcctcggcctcctgagtggctgggattgcaggcatgtgccgccacgcccggctaattttgtatttttagtggagtaggggtttctccatgttggtcaggctggtcttgggctcccggcctcaggtgatccacctgccttggcttcccggggtgctgggattgcaggcatgagccatcgcccccagcctatacgtgaacatttccaagagaagattttaattagtctcattacaaaaaatgataagtattgtgaggtaatgcatacattaagtaggttgattttgccattctacactgcagacat End editing Edited EST: DW420166, type: ag Aligns to: chr15:64512363-64512651 (-+) All mismatches: ag (14), ag (15), ag (75), ag (95), ag (97), ag (114), tc (123), ag (133), ag (138), ag (151), ag (152), ag (157), ag (176), ag (188), ag (222), ag (232), ag (233), ag (242), ag (246), ag (259), ag (274), ag (279), ag (294), Editing mismatches: 22, all mismatches: 23, alignment length: 289, cluster length: 281, total number of As: 79 Locations in RNA: 14 15 75 95 97 114 133 138 151 152 157 176 188 222 232 233 242 246 259 274 279 294 Locations in genome: 64512650 64512649 64512589 64512569 64512567 64512550 64512531 64512526 64512513 64512512 64512507 64512488 64512476 64512442 64512432 64512431 64512422 64512418 64512405 64512390 64512385 64512370 Upstream nucleotide (in genome): c a c t t g c g c a c a t c t a t c c a a c Upstream nucleotide summary: a: 6, c: 9, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): a g g t a g c g a g g g c g a t c g g c g g Downstream nucleotide summary: a: 4, c: 4, g: 12, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 4, at: 1, ca: 2, cc: 1, cg: 6, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 2, tg: 0, tt: 1, other: 0 >chr15:64512363-64512651 (-) caagggagactggagttataactgggcaagttgctatttgcaacaattagaagttctgggccaggcatggtggctcatgcctataataccagcactttgggaggctgagttgggtggatcacttgaggtcaggagttcaagaccagcctgaccagcaagatgaagcttcgtctttactaaaaatacaaaaattatccaggcatggtggcaggtgcctgtaatctcagctactcaggaggctgaggcaggacaatggcttgaacccaagaggcggaggttgcagtgagct >DW420166:13-301 (+) cgggggagactggagttataactgggcaagttgctatttgcaacaattagaagttctgggccgggcatggtggctcatgcctgtgataccagcactttggggggctgagtcgggtggatcgcttggggtcaggagttcgggaccggcctgaccagcaagatgaggcttcgtctttgctaaaaatacaaaaattatccaggcatggtggcgggtgcctgtggtctcagctgctcgggaggctgaggcgggacaatggcttgagcccaggaggcggaggttgcggtgagct End editing Edited EST: DW423568, type: ag Aligns to: chr15:59414727-59414990 (-+) All mismatches: ag (14), ag (15), ag (19), ag (20), ag (39), ag (47), ag (62), ag (70), ag (77), ag (83), ag (86), ag (89), ag (97), ag (104), ag (105), ag (119), ag (123), ag (188), ag (197), ag (208), ag (222), ag (223), ag (231), ga (251), ga (261), Editing mismatches: 23, all mismatches: 25, alignment length: 261, cluster length: 219, total number of As: 67 Locations in RNA: 14 15 19 20 39 47 62 70 77 83 86 89 97 104 105 119 123 188 197 208 222 223 231 Locations in genome: 59414986 59414985 59414981 59414980 59414961 59414953 59414938 59414930 59414923 59414917 59414914 59414911 59414903 59414896 59414895 59414880 59414876 59414811 59414802 59414791 59414777 59414776 59414768 Upstream nucleotide (in genome): c a c a a c a g t t g a a c a c t g t c c a g Upstream nucleotide summary: a: 8, c: 7, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): a g a g g g c g t t a a t a g c t g a c a c g Downstream nucleotide summary: a: 7, c: 4, g: 8, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 4, at: 1, ca: 4, cc: 2, cg: 1, ct: 0, ga: 1, gc: 0, gg: 3, gt: 0, ta: 1, tc: 0, tg: 0, tt: 3, other: 0 >chr15:59414727-59414990 (-) ggccaaggcaagaagatcgcttgagcttaagagtttcagaccagcttgggtaacattgggagaccctatctctatgaaaaatgaaaaattagccaagcttggtggtgtacacctatagtcccagttacttgaggagctgaggaggaaggattgcttgagcccagaagtttgaggtaatgagcgatattaacgccattgcactccagcctgggcaacacagtgagaccctgtctcaaaaaaaaaagaaaaaaaaagaaaaaaaaa >DW423568:10-270 (+) ggccggggcgggaagatcgcttgagcttaggagtttcggaccagcttgggtagcattgggggaccctgtctctgtggaagatgaaaagttagccgggcttg-tggtgtacgcctgtagtcccagttacttgaggagctgaggaggaaggattgcttgagcccagaagtttgaggtaatgggcgatattgacgccattgcgctccagcctgggcggcacagtgggaccctgtc--aaaaaaaaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: DW426214, type: ag Aligns to: chr15:77140386-77140655 (-+) All mismatches: ag (14), ag (15), ag (16), ag (33), ag (56), ag (72), ag (86), ag (101), ag (109), ag (110), ag (115), ag (135), ag (146), ag (149), ag (151), ag (154), ag (171), ag (182), ag (183), ag (199), ag (205), ag (218), ag (224), ag (235), ag (244), ag (253), ag (255), Editing mismatches: 27, all mismatches: 27, alignment length: 270, cluster length: 242, total number of As: 66 Locations in RNA: 14 15 16 33 56 72 86 101 109 110 115 135 146 149 151 154 171 182 183 199 205 218 224 235 244 253 255 Locations in genome: 77140655 77140654 77140653 77140636 77140613 77140597 77140583 77140568 77140560 77140559 77140554 77140534 77140523 77140520 77140518 77140515 77140498 77140487 77140486 77140470 77140464 77140451 77140445 77140434 77140425 77140416 77140414 Upstream nucleotide (in genome): n a a c a g c t c a c a t a a t c t a g g c a c c g g Upstream nucleotide summary: a: 9, c: 8, g: 5, t: 4, other: 1 Downstream nucleotide (in genome): a a c g t g g g a g g c c a a g t a t g g c c g g g t Downstream nucleotide summary: a: 6, c: 5, g: 12, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 1, at: 2, ca: 1, cc: 1, cg: 5, ct: 1, ga: 0, gc: 0, gg: 4, gt: 1, ta: 1, tc: 1, tg: 2, tt: 0, other: 1 >chr15:77140386-77140655 (-) aaacacaatgttttaggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcaggtcacctgagattaggagttcaagaccagcctggccagcatggtgaaaccccgtttctacaaaaatagaaaaattagccaggcatgatggctgtaatcccagctactcgggaggctgaggtgggagaaccacttgaacctgggaggcagagattgcagtgagctgagatcacgccattgcactccagcatgggcaa >DW426214:14-283 (+) gggcacaatgttttaggccgggcgcggtggctcacgcctgtagtcccagcactttggggggctgaggtgggcgggtcacctgagattgggagttcgggaccggcctggccagcatggtgaagccccgtttctgcagagatggaaaaattagccaggcgtgatggctgtggtcccagctactcggggggctggggtgggagaaccgcttgagcctgggaggcggagattgcggtgagctggggtcacgccattgcactccagcatgggcaa End editing Edited EST: DW465477, type: ag Aligns to: chr15:59212248-59212588 (-+) All mismatches: ag (27), ag (137), ag (142), ag (147), ag (148), ag (211), ag (233), ag (254), ag (293), ag (294), ac (307), ag (311), ag (312), Editing mismatches: 12, all mismatches: 13, alignment length: 341, cluster length: 286, total number of As: 56 Locations in RNA: 27 137 142 147 148 211 233 254 293 294 311 312 Locations in genome: 59212578 59212468 59212463 59212458 59212457 59212394 59212372 59212351 59212312 59212311 59212294 59212293 Upstream nucleotide (in genome): a c t c a t c t c a c a Upstream nucleotide summary: a: 4, c: 5, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g g c a c c g g a a a t Downstream nucleotide summary: a: 4, c: 3, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 1, ca: 3, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 1, tt: 0, other: 0 >chr15:59212248-59212588 (-) ggcctcccaaagtgctgggattacaggcatgagctgctgtgcccagccttatttatttattttactttcaagacagagtgtcgctctgtctctcaggcatgagtgcagtggggcgatctcagcttaccgcaacctccacttccccggttcaagtgattgaacccagtgcctcagcctcctgagtagctgggattacaggcgtgcaccaccatgcccagctacttttttgtattttttagtagaggtggggttttgctagttggccaggctgctctcaaactccgggcttcaagcaatctgccctccttggcctcccaaattgctgggtttacaggcatgag >DW465477:17-357 (+) ggcctcccaaggtgctgggattacaggcatgagctgctgtgcccagccttatttatttattttactttcaagacagagtgtcgctctgtctctcaggcatgagtgcagtggggcgatctcggcttgccgcggcctccacttccccggttcaagtgattgaacccagtgcctcagcctcctgagtagctgggattgcaggcgtgcaccaccatgcccggctacttttttgtattttttggtagaggtggggttttgctagttggccaggctgctctcggactccgggcttccagcggtctgccctccttggcctcccaaattgctgggtttacaggcatgag End editing Edited EST: BF116250, type: ga Aligns to: chr15:74711137-74711295 (-+) All mismatches: ga (61), ga (74), ga (76), ga (84), ga (108), ga (110), ga (128), ga (139), ga (145), ga (155), ga (157), ga (168), Editing mismatches: 12, all mismatches: 12, alignment length: 159, cluster length: 108, total number of Gs: 37 Locations in RNA: 61 74 76 84 108 110 128 139 145 155 157 168 Locations in genome: 74711244 74711231 74711229 74711221 74711197 74711195 74711177 74711166 74711160 74711150 74711148 74711137 Upstream nucleotide (in genome): c c a a c t t a a t t a Upstream nucleotide summary: a: 5, c: 3, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g a c c t g a g a t c n Downstream nucleotide summary: a: 3, c: 3, g: 3, t: 2, other: 1 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 0, ca: 1, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 1, other: 1 >chr15:74711137-74711295 (-) aggccatgtagggcaggaccgggtggactttggccagactgagccgcacacggtgcttttccacgagccaggcagctcctctgtgtgggtgggaggacgtggcaaggtctacctctttgacttccccgagggcaagaacgcatctgtgcgcacggtgag >BF116250:10-168 (+) aggccatgtagggcaggaccgggtggactttggccagactgagccgcacacagtgcttttccacaaaccaggcaactcctctgtgtgggtgggaggacatagcaaggtctacctctttaacttccccgaaggcaaaaacgcatctatacgcacggtgaa End editing Edited EST: R85896, type: ag Aligns to: chr16:21873030-21873322 (-+) All mismatches: ag (2), ag (10), ag (16), ag (27), ag (76), ag (86), ag (102), ag (120), ag (128), ag (153), ag (157), ag (238), ag (256), Editing mismatches: 13, all mismatches: 13, alignment length: 295, cluster length: 254, total number of As: 50 Locations in RNA: 2 10 16 27 76 86 102 120 128 153 157 238 256 Locations in genome: 21873321 21873313 21873307 21873296 21873247 21873237 21873221 21873203 21873195 21873170 21873166 21873085 21873068 Upstream nucleotide (in genome): c c c a t t c t t t c g c Upstream nucleotide summary: a: 1, c: 6, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g a g g g c c t g g g t g Downstream nucleotide summary: a: 1, c: 2, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 1, cc: 1, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 1, tg: 3, tt: 1, other: 0 >chr16:21873030-21873322 (-) cagtggcgcaatctcagctcactgcaagctctgcctcccgggttcacgccattcttctgcctcagcctcccgagtagctgggactacaggcgcccaccgccacgcccggctaattttttatatttttagtagagatggggttttactatgttagccaggatggtctcgatctcttgaccttgtgatctacccgccttggcctcccaaagtgaaacttttctttaaaatagagatggga-tcttgctgtattgcccaggctgg-tctcagactccttgccttaagcagtcctccca >R85896:1-295 (+) cggtggcgcgatctcggctcactgcaggctctgcctcccgggttcacgccattcttctgcctcagcctcccgagtggctgggactgcaggcgcccaccgccgcgcccggctaattttttgtatttttggtagagatggggttttactatgttggccgggatggtctcgatctcttgaccttgtgatctacccgccttggcctcccaaagtgaaacttttctttaaaatagagatggggatcttgctgtattgcccgggntgggtctcagactccttgccttaagcagtcctccca End editing Edited EST: DA103871, type: ag Aligns to: chr16:23457836-23458381 (-+) All mismatches: ag (30), ag (32), ag (38), ag (61), ag (79), ag (130), ag (171), ag (181), ag (186), ag (207), ag (237), ag (249), ag (252), ag (272), ag (342), ag (358), ag (382), ag (469), ag (471), ag (472), ag (477), ag (481), ag (485), ag (488), ag (494), ag (498), ag (507), ag (513), ag (524), ag (533), Editing mismatches: 30, all mismatches: 30, alignment length: 546, cluster length: 504, total number of As: 129 Locations in RNA: 30 32 38 61 79 130 171 181 186 207 237 249 252 272 342 358 382 469 471 472 477 481 485 488 494 498 507 513 524 533 Locations in genome: 23458352 23458350 23458344 23458321 23458303 23458252 23458211 23458201 23458196 23458175 23458145 23458133 23458130 23458110 23458040 23458024 23458000 23457913 23457911 23457910 23457905 23457901 23457897 23457894 23457888 23457884 23457875 23457869 23457858 23457849 Upstream nucleotide (in genome): c c t t g a t t g c g c c a c c c t t a c t c g g c c a c c Upstream nucleotide summary: a: 4, c: 14, g: 5, t: 7, other: 0 Downstream nucleotide (in genome): c c a g g a g c g c g c c c g a g t a a g c g g g g c c g g Downstream nucleotide summary: a: 5, c: 10, g: 14, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 0, at: 0, ca: 1, cc: 6, cg: 7, ct: 0, ga: 0, gc: 0, gg: 5, gt: 0, ta: 2, tc: 2, tg: 2, tt: 1, other: 0 >chr16:23457836-23458381 (-) agatatttttaggcttggcattgtggatcacacttgtaatcccagcattttgggaggcctagccaggcaggtcccttgagcccaggagtttgagaccagcctgggcaacatggtgaaactgtctctgcaaaatatataaaaattattcagtcctggtggtgtgtgcctgtagtcccacctacttgagaggctgaggtgggaggatcacctgagaccaggaggttgaggttgcagtgagctgtgatttcaccactgcactccagtctgggcaaccgagtgagaccctgtctcaaaaataattttaaaataggccgggcctggtggctcatgcctgtattcccagcactttgggagcccaaggcgggtggatcacctgaggtcaggggttcaagaccagcctggccaacatggtgaaaccccgtctctactgaaaatacaaaaaattagccaggcgggtggcgggcgcctataaaaccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagccgagatt >DA103871:1-546 (+) agatatttttaggcttggcattgtggatcgcgcttgtgatcccagcattttgggaggcctggccaggcaggtcccttgggcccaggagtttgagaccagcctgggcaacatggtgaaactgtctctgcagaatatataaaaattattcagtcctggtggtgtgtgcctgtggtcccacctgcttgggaggctgaggtgggaggatcgcctgagaccaggaggttgaggttgcagtgggctgtgatttcgccgctgcactccagtctgggcagccgagtgagaccctgtctcaaaaataattttaaaataggccgggcctggtggctcatgcctgtattcccggcactttgggagcccgaggcgggtggatcacctgaggtcgggggttcaagaccagcctggccaacatggtgaaaccccgtctctactgaaaatacaaaaaattagccaggcgggtggcgggcgcctgtggaaccggctgctcggggggctggggcgggagaatcgcttgagcctgggaggcggaggttgcggtgagccgagatt End editing Edited EST: DB131684, type: ag Aligns to: chr16:21878169-21878710 (-+) All mismatches: ag (1), ag (2), ag (28), ag (54), ag (79), ag (80), ag (95), ag (103), ag (107), ag (111), ag (115), ag (116), ag (137), ag (160), ag (169), ag (202), ag (203), ag (208), ga (365), Editing mismatches: 18, all mismatches: 19, alignment length: 543, cluster length: 207, total number of As: 61 Locations in RNA: 1 2 28 54 79 80 95 103 107 111 115 116 137 160 169 202 203 208 Locations in genome: 21878710 21878709 21878683 21878657 21878633 21878632 21878617 21878609 21878605 21878601 21878597 21878596 21878575 21878552 21878543 21878510 21878509 21878504 Upstream nucleotide (in genome): n a c a a a a a a t c a t g g t a g Upstream nucleotide summary: a: 9, c: 2, g: 3, t: 3, other: 1 Downstream nucleotide (in genome): a t g g a c a a a g a g g g a a g g Downstream nucleotide summary: a: 8, c: 1, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 3, at: 1, ca: 1, cc: 0, cg: 1, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 1 >chr16:21878169-21878710 (-) aatcccagcactttgggaggccgagacaggtggatcacgaggtcaggagatcaagaccatcctggttaacac-ggtgaaacctcatctctactaaaaatacaaaaaaattagccaagtgtggtggcgggtgcctgtagtcccacctactctggaggctgaggcaggagaatgggatgaacccgggaggcgaagcttgcagtaagccgagatcgcgccactgcactccagcctgggtgacagagggagactccatctcaaaaaaaaaagagagaaagtaaaggaataaaagaatggctaccccatagacggagcagccgtgagggctgctggttgcccatttttatggttatttgttgatgatatgctaaacaaggagtggatttttcatgcctcctctttttagaccatatagggtaacttcttgatgttgccgtggcatttgtaaactgtcatggtgctggtaggagtgtagcagggaggatgatgggaggtcagtcttgtctctattttggttttggtgggttttggccagctccttcact >DB131684:1-543 (+) ggtcccagcactttgggaggccgagacgggtggatcacgaggtcaggagatcaggaccatcctggttaacacaggtgaggcctcatctctactagaaatacagaaagattggccgggtgtggtggcgggtgcctgtggtcccacctactctggaggctggggcaggaggatgggatgaacccgggaggcgaagcttgcagtgggccgggatcgcgccactgcactccagcctgggtgacagagggagactccatctcaaaaaaaaaagagagaaagtaaaggaataaaagaatggctaccccatagacggagcagccgtgagggctgctggttgcccatttttatggttatttgttgatgatatactaaacaaggagtggatttttcatgcctcctctttttagaccatatagggtaacttcttgatgttgccgtggcatttgtaaactgtcatggtgctggtaggagtgtagcagggaggatgatgggaggtcagtcttgtctctattttggttttggtgggttttggccagctccttcact End editing Edited EST: DW416015, type: ag Aligns to: chr16:89517858-89518151 (-+) All mismatches: ag (70), ag (71), ag (101), ag (106), tc (109), ag (116), ag (130), ag (140), ag (161), ag (168), ag (170), ag (173), ag (175), ag (176), ag (179), ag (180), ag (225), ag (252), ag (291), Editing mismatches: 18, all mismatches: 19, alignment length: 294, cluster length: 222, total number of As: 61 Locations in RNA: 70 71 101 106 116 130 140 161 168 170 173 175 176 179 180 225 252 291 Locations in genome: 89518098 89518097 89518067 89518062 89518052 89518038 89518028 89518007 89518000 89517998 89517995 89517993 89517992 89517989 89517988 89517943 89517916 89517877 Upstream nucleotide (in genome): t a c c c c a t a t a a a t a g a a Upstream nucleotide summary: a: 9, c: 4, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): a t g c g g c c t c a a t a c g c c Downstream nucleotide summary: a: 4, c: 7, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 4, ag: 0, at: 3, ca: 0, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 2, tg: 0, tt: 0, other: 0 >chr16:89517858-89518151 (-) tgcttactaaaagtaatttgtgaaatgggccaggtgcggtggctctagcctgtaatcccagcactttgggaggccgaggcttgcagatcacctgaggtcaggagtttgagaccagcctggccaacactgcgaaattctgtctctactaaaaatacaaaaattaaccagtcttgatggcatgtgcctttagtaatcttagctacttgggaggctgaggtgtgaggattgcttgaaaactcgggaggcggagtctgcagtgagctgagatcacacaactgcactcctgcctgggcc >DW416015:17-310 (+) tgcttactaaaagtaatttgtgaaatgggccaggtgcggtggctctagcctgtggtcccagcactttgggaggccgaggcttgcggatcgcccgaggtcgggagtttgagaccggcctggccagcactgcgaaattctgtctctgctaaaagtgcagaggttggccagtcttgatggcatgtgcctttagtaatcttagctacttggggggctgaggtgtgaggattgcttgaaagctcgggaggcggagtctgcagtgagctgagatcacacagctgcactcctgcctgggcc End editing Edited EST: DW425981, type: ag Aligns to: chr16:69754804-69755070 (-+) All mismatches: ag (27), ag (34), ag (47), ag (53), ag (157), ag (159), ag (165), ag (168), ag (171), ag (206), ag (212), ag (214), at (251), Editing mismatches: 12, all mismatches: 13, alignment length: 267, cluster length: 188, total number of As: 58 Locations in RNA: 27 34 47 53 157 159 165 168 171 206 212 214 Locations in genome: 69755060 69755053 69755040 69755034 69754930 69754928 69754922 69754919 69754916 69754881 69754875 69754873 Upstream nucleotide (in genome): a t c a c c t t c g g g Upstream nucleotide summary: a: 2, c: 4, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): c g g a c c g t g g g g Downstream nucleotide summary: a: 1, c: 3, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 0, ca: 0, cc: 2, cg: 2, ct: 0, ga: 0, gc: 0, gg: 3, gt: 0, ta: 0, tc: 0, tg: 2, tt: 1, other: 0 >chr16:69754804-69755070 (-) tataatcccaacattgtaggaggctgaggcaggcaaaattgccccagcctgggcaacacggctccaaatttgaccagcctgggcaacatggcaaatccctgtctctacaaaaaaaaaaaaaaaattaggtgtggtggtgcacacctgtagtatcagctactcaggaggctgaggtgggaggatagcttgagcctgagaggtcaaggctgcagtgacctgagatcatgccactgcattccagcctgggcaacagatcgagaccctgtc >DW425981:17-283 (+) tataatcccagcattgtgggaggctgaggcgggcaagattgccccagcctgggcaacacggctccaaatttgaccagcctgggcaacatggcaaatccctgtctctacaaaaaaaaaaaaaaaattaggtgtggtggtgcgcgcctgtggtgtcggctactcaggaggctgaggtgggaggatagcttgggcctggggggtcaaggctgcagtgacctgagatcatgccactgctttccagcctgggcaacagatcgagaccctgtc End editing Edited EST: DW428359, type: ag Aligns to: chr16:58653353-58653614 (-+) All mismatches: ag (20), ag (28), ag (29), ag (80), ag (81), ag (86), ag (121), ag (122), ag (123), ag (126), ag (131), ag (139), ta (158), ag (159), ag (165), ag (169), ag (186), ga (199), ag (200), ag (201), ag (208), Editing mismatches: 19, all mismatches: 21, alignment length: 262, cluster length: 189, total number of As: 51 Locations in RNA: 20 28 29 80 81 86 121 122 123 126 131 139 159 165 169 186 200 201 208 Locations in genome: 58653609 58653601 58653600 58653549 58653548 58653543 58653508 58653507 58653506 58653503 58653498 58653490 58653470 58653464 58653460 58653443 58653429 58653428 58653421 Upstream nucleotide (in genome): c t a c a c a a a t a c t c t c g a g Upstream nucleotide summary: a: 7, c: 6, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): c a t a g g a a a c a g g g c g a c g Downstream nucleotide summary: a: 7, c: 4, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 1, at: 1, ca: 1, cc: 1, cg: 4, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr16:58653353-58653614 (-) ggctcacgcctgtaatcccagcactttgggaggccgaggtgggcagatcacaaagtcaggagttcaagaccagcctggtcaatatggtgaaaccccgtctctactaaaaatacaaaaattagccaggtgtggtggcgggcggctagtcccagctacttgggaggctgaggcaggagaattgcttgaacctgggaggcggaggttgcagtgagctgagatcgcgccactgcacttcagcctgggtgacagagcgagacgctgt >DW428359:15-276 (+) ggctcgcgcctgtggtcccagcactttgggaggccgaggtgggcagatcacaaagtcaggagttcgggaccggcctggtcaatatggtgaaaccccgtctctactagggatgcaaagattagccgggtgtggtggcgggcggcaggtcccggctgcttgggaggctgaggcgggagaattgcttaggcctggggggcggaggttgcagtgagctgagatcgcgccactgcacttcagcctgggtgacagagcgagacgctgt End editing Edited EST: DW428515, type: ag Aligns to: chr16:69361091-69361344 (-+) All mismatches: ag (17), ag (18), ag (23), ag (40), ag (44), ag (63), ag (71), ag (86), ag (89), ag (108), ag (112), ag (113), ag (122), ag (142), ag (153), ag (156), ag (162), ag (192), ag (193), ag (201), ag (205), tc (240), Editing mismatches: 21, all mismatches: 22, alignment length: 254, cluster length: 189, total number of As: 53 Locations in RNA: 17 18 23 40 44 63 71 86 89 108 112 113 122 142 153 156 162 192 193 201 205 Locations in genome: 69361344 69361343 69361338 69361321 69361317 69361298 69361290 69361275 69361272 69361253 69361249 69361248 69361239 69361219 69361208 69361205 69361199 69361169 69361168 69361160 69361156 Upstream nucleotide (in genome): n a c a c c c c c t a a a t a c t c a g c Upstream nucleotide summary: a: 7, c: 9, g: 1, t: 3, other: 1 Downstream nucleotide (in genome): a t g g g g a a t c a a a g t c c a a g g Downstream nucleotide summary: a: 8, c: 3, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 1, at: 2, ca: 3, cc: 1, cg: 4, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 2, tg: 1, tt: 0, other: 1 >chr16:69361091-69361344 (-) aatcccagcactttgggaggtcaaggcaggcagatcacctgaggtcaggagttcaagaccagcctggccaacatggcgaaacactgtttctactaaaaatatgaaaattagctgggtgtgctggtaggcgcctgtaatcacagctacttgggaggctgaggcgggagaatcgctcaaacctgggaggcagaggttgcagtgggctgagatctcgccactgtactccagcctgggcgacagaccaaggctctgtc >DW428515:17-270 (+) ggtcccggcactttgggaggtcagggcgggcagatcacctgaggtcgggagttcgagaccagcctggccgacgtggcgaaacactgtttctgctaggaatatgaagattagctgggtgtgctggtgggcgcctgtagtcgcagctgcttgggaggctgaggcgggagaatcgctcggacctggggggcggaggttgcagtgggctgagatctcgccactgtaccccagcctgggcgacagaccaaggctctgtc End editing Edited EST: DW429106, type: ag Aligns to: chr16:21529217-21529473 (-+) All mismatches: ag (17), ag (18), ag (23), ag (26), ag (29), ag (39), ag (44), ag (48), ag (63), gc (64), ag (72), ag (83), ag (86), ag (87), tc (93), ag (97), ag (102), ag (108), ag (117), ag (126), ag (134), ag (136), ag (152), ag (153), ag (206), ag (213), ag (221), ag (243), ag (248), Editing mismatches: 27, all mismatches: 29, alignment length: 257, cluster length: 232, total number of As: 65 Locations in RNA: 17 18 23 26 29 39 44 48 63 72 83 86 87 97 102 108 117 126 134 136 152 153 206 213 221 243 248 Locations in genome: 21529473 21529472 21529467 21529464 21529461 21529451 21529446 21529442 21529427 21529418 21529407 21529404 21529403 21529393 21529388 21529382 21529373 21529364 21529356 21529354 21529338 21529337 21529284 21529277 21529269 21529247 21529242 Upstream nucleotide (in genome): n a c c t c c c c g g c a a c t t t c t t a g g c c c Upstream nucleotide summary: a: 4, c: 12, g: 4, t: 6, other: 1 Downstream nucleotide (in genome): a t g c t a g g g g c a c c t c c g t g a t g t c g a Downstream nucleotide summary: a: 5, c: 7, g: 9, t: 6, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 2, ca: 3, cc: 2, cg: 5, ct: 2, ga: 0, gc: 1, gg: 2, gt: 1, ta: 1, tc: 2, tg: 2, tt: 1, other: 1 >chr16:21529217-21529473 (-) aatcccagcactatgggaggccaagacaggcagatctaccgaggtcaggagtccgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgagcatagtggctcacgcctgtaatcccagctacttatgagtctgaggcatgctccgggacgtggagtttgcagtgagttgagatcctgccactgcactccagcctgggtgacagagcaagcctgtc-tcaaaaaaaaaaaaaaa >DW429106:17-273 (+) ggtcccggcgctgtgggaggccgagacgggcggatctaccgaggtcgcgagtccgggaccagcctggccggcatggcgaagccccgtctctgctaaaaatgcaaaaattggctgagcgtggtggctcacgcctgtggtcccagctacttatgagtctgaggcatgctccgggacgtggagtttgcagtgggttgaggtcctgccgctgcactccagcctgggtgacggagcgagcctgtcgt-aaaaaaaaaaaaaaa End editing Edited EST: DW430998, type: ag Aligns to: chr16:72968039-72968295 (-+) All mismatches: ag (15), ag (16), ag (21), ag (34), ag (39), ag (45), ag (65), ag (90), ag (94), ag (104), ag (142), ag (148), ag (168), ag (197), ag (230), ag (242), ca (247), Editing mismatches: 16, all mismatches: 17, alignment length: 257, cluster length: 228, total number of As: 46 Locations in RNA: 15 16 21 34 39 45 65 90 94 104 142 148 168 197 230 242 Locations in genome: 72968294 72968293 72968288 72968275 72968270 72968264 72968244 72968219 72968215 72968205 72968167 72968161 72968141 72968112 72968079 72968067 Upstream nucleotide (in genome): g a a c c a a c t t t t c g a t Upstream nucleotide summary: a: 5, c: 4, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): a t t g g g g a g c t a t c g c Downstream nucleotide summary: a: 3, c: 3, g: 6, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 3, at: 2, ca: 1, cc: 0, cg: 2, ct: 1, ga: 1, gc: 1, gg: 0, gt: 0, ta: 1, tc: 2, tg: 1, tt: 1, other: 0 >chr16:72968039-72968295 (-) gaatgcaatggtgtgatctcagctcagtgcaagcttcgcctcccgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacaggcgcccgccaccaggcccggctaactttttttgtatttttaacagacacggggttttaccatgttggccaggctggtctcgaactcctgacctcaagtgatcctcctgcctcagcctcctaaagtattggaattacaggctgagccatcacgcctagcctact >DW430998:14-270 (+) gggtgcagtggtgtgatctcggctcggtgcaggcttcgcctcccgggttcaggtgattctcctgcctcagcctcccgagtggctgggattgcaggcgcccgccaccaggcccggctaactttttttgtgtttttgacagacacggggttttaccgtgttggccaggctggtctcgaactcctggcctcaagtgatcctcctgcctcagcctcctaaggtattggaattgcaggatgagccatcacgcctagcctact End editing Edited EST: DW434111, type: ag Aligns to: chr16:47280726-47280972 (-+) All mismatches: ag (38), ag (48), ag (70), ag (75), ag (80), ag (90), ag (92), ag (98), ag (99), ag (100), ag (144), ag (145), ag (189), ag (198), ag (206), ag (207), ag (217), ag (236), ag (253), ag (254), ga (259), Editing mismatches: 20, all mismatches: 21, alignment length: 244, cluster length: 220, total number of As: 61 Locations in RNA: 38 48 70 75 80 90 92 98 99 100 144 145 189 198 206 207 217 236 253 254 Locations in genome: 47280951 47280941 47280919 47280913 47280908 47280898 47280896 47280890 47280889 47280888 47280844 47280843 47280799 47280790 47280782 47280781 47280771 47280752 47280733 47280732 Upstream nucleotide (in genome): g c a g c a c g a a t a t c c a c c c a Upstream nucleotide summary: a: 7, c: 8, g: 3, t: 2, other: 0 Downstream nucleotide (in genome): g g g g g c t a a c a t g g a g c a a a Downstream nucleotide summary: a: 7, c: 3, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 2, at: 1, ca: 3, cc: 1, cg: 3, ct: 1, ga: 1, gc: 0, gg: 2, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr16:47280726-47280972 (-) ctggaatcccagcagtttgggaggtcaaggcaggcgaatcacttgaggccccaagttcgagaccagcctggtcaacatggtgaaaccccatcactactaaaaatacaggtgtggtggcaggcgcctgtaatcccagctacttgggaggctgaggcacgaaaatcacaggaggtagaggttgcagtgtgccaagatggtgccactgcatttcagcgtgggcaacagagtgagactgtctcaaaaaaga >DW434111:17-260 (+) ctggaatcccagcagtttggggggtcaaggcgggcgaatcacttgaggccccagg-tcgggaccggcctggtcagcgtggtggggccccatcactactaaaaatacaggtgtggtggcaggcgcctgtggtcccagctacttgggaggctgaggcacgaaaatcacaggaggtggaggttgcggtgtgccgggatggtgccgctgcatttcagcgtgggcgacagagtgagactgtc--ggaaaaaa End editing Edited EST: DW452023, type: ag Aligns to: chr16:12005954-12006312 (-+) All mismatches: ag (148), ag (161), ag (166), ag (169), ag (179), ag (182), ag (185), ag (198), ag (204), ag (205), ag (208), ag (209), ag (234), ag (244), ag (246), ag (250), ta (289), ag (370), Editing mismatches: 17, all mismatches: 18, alignment length: 356, cluster length: 224, total number of As: 38 Locations in RNA: 148 161 166 169 179 182 185 198 204 205 208 209 234 244 246 250 370 Locations in genome: 12006179 12006166 12006161 12006158 12006148 12006145 12006142 12006129 12006123 12006122 12006119 12006118 12006093 12006083 12006081 12006077 12005956 Upstream nucleotide (in genome): c a c g g t a c c a c a t t c c a Upstream nucleotide summary: a: 5, c: 7, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g t c t c c c g a g a t g c g c a Downstream nucleotide summary: a: 3, c: 6, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 2, ca: 2, cc: 2, cg: 3, ct: 0, ga: 0, gc: 1, gg: 0, gt: 1, ta: 0, tc: 2, tg: 1, tt: 0, other: 0 >chr16:12005954-12006312 (-) gtggaacttgaattttaaagagaaacattctgttttgtagtgttccgtatttgctgaatgccttatttattggaagaggaggttttttttttgtttttttttttttttgagacggagtcttgctctgttgcccaggctggagtgcaatggcacgatctcggctgactacaacctcctcctcccaggttcaagcaattctcctgcctcagcctcccgagtagctgggattacaggcacctgccatcatgcccagctattttgtgtgtgtgtgtttttgcagggatggggtttcaccatgttggctaggctggtcttgaactcttgacctcaggtgatctgcccgccttggcctcccaaag >DW452023:17-372 (+) gtggaacttgaattttaaagagaaacattctgttttgtagtgttccgtatttgctgaatgccttatttattggaagaggaggttttttttttgttttttttttttt--gagacggagtcttgctctgttgcccgggctggagtgcagtggcgcggtctcggctggctgcagcctcctcctcccgggttcgggcggttctcctgcctcagcctcccgagtggctgggattgcgggcgcctgccatcatgcccagctattttgtgtgtgtgtgtttatgcagggatggggtt-caccatgttggctaggctggtcttgaactcttgacctcaggtgatctgcccgccttggcctcccagag End editing Edited EST: BF055220, type: ga Aligns to: chr16:135399-135756 (-+) All mismatches: ga (11), ga (14), ga (23), ga (29), ga (35), ga (40), ga (41), ga (47), gc (50), ga (52), ga (53), ga (55), ga (64), ga (66), ga (78), ga (86), gc (89), ga (97), ga (99), ga (102), ga (105), ga (117), ga (118), ga (127), ga (133), ga (134), ga (136), ga (172), ga (173), ga (197), ga (205), ga (212), ga (222), ga (236), ga (242), ga (251), ga (259), ga (277), ga (280), ga (287), ga (289), ga (295), ga (310), ga (319), ga (330), ga (334), ga (341), ga (344), ag (346), ga (348), Editing mismatches: 47, all mismatches: 50, alignment length: 358, cluster length: 338, total number of Gs: 108 Locations in RNA: 11 14 23 29 35 40 41 47 52 53 55 64 66 78 86 97 99 102 105 117 118 127 133 134 136 172 173 197 205 212 222 236 242 251 259 277 280 287 289 295 310 319 330 334 341 344 348 Locations in genome: 135746 135743 135734 135728 135722 135717 135716 135710 135705 135704 135702 135693 135691 135679 135671 135660 135658 135655 135652 135640 135639 135630 135624 135623 135621 135585 135584 135560 135552 135545 135535 135521 135515 135506 135498 135480 135477 135470 135468 135462 135447 135438 135427 135423 135416 135413 135409 Upstream nucleotide (in genome): t c t a t c g a c g a c g t c c g t t c g g a g g a g t a g g a c t c c a t c t a a t c a c a Upstream nucleotide summary: a: 12, c: 13, g: 11, t: 11, other: 0 Downstream nucleotide (in genome): t a a g c g a a g a g g c c a g c c c g c c g g a g t a g c a a c a g g g c a a a g c c a c c Downstream nucleotide summary: a: 15, c: 15, g: 15, t: 2, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 7, at: 0, ca: 3, cc: 3, cg: 7, ct: 0, ga: 4, gc: 5, gg: 1, gt: 1, ta: 4, tc: 6, tg: 0, tt: 1, other: 0 >chr16:135399-135756 (-) cagccactctgtcgaccacactgacccaggggctgccccggacatagaagcggaggggtttccgggcccactcccctgcatggccgacgcccacccgggctgctgccactacagccggctcactgggctccaggggaccacgctccagccatacagcttcatcctgt-gccaggtccctctggtcaaagctcttgttgatggccagggcctggcacagcttggaggggccactgcagagctcgcggtccttgaggacacggctggcggtgcctttccggagggtgctgcgaagctgacgcatggtctccagaccttccaggggctccagtgctcgcagcaagacgcaagccccgtcccc >BF055220:1-358 (+) cagccactctatcaaccacactaacccaagggctaccccaaacataaaaccaaaagggtttccagacccactcccctacatggccaacccccacccagactactaccactacagccaactcactggactccaaagaaccacgctccagccatacagcttcatcctgtagcc-aatccctctggtcaaagctcttgttaatggccaaggcctgacacancttgaaggggccactgcaaagctcacggtccttaaggacacagctggcggtgcctttccagaaggtgctacaaagctaacgcatggtctccaaaccttccaagggctccantactcacagcaaaacacgaaccccgtcccc End editing Edited EST: BE045391, type: ga Aligns to: chr16:85832669-85833023 (-+) All mismatches: ga (149), ga (161), ga (170), ga (174), ga (177), ga (182), ga (188), ga (195), ga (198), ga (204), ga (206), ga (213), ga (219), ga (221), ga (224), ga (227), ga (233), ga (235), ga (255), ga (258), ga (259), ga (265), ga (268), ga (286), ga (288), ga (310), ga (311), ga (318), ga (325), ga (333), ga (336), ga (337), ga (339), ga (342), ga (343), ga (354), ga (355), Editing mismatches: 37, all mismatches: 37, alignment length: 356, cluster length: 206, total number of Gs: 59 Locations in RNA: 149 161 170 174 177 182 188 195 198 204 206 213 219 221 224 227 233 235 255 258 259 265 268 286 288 310 311 318 325 333 336 337 339 342 343 354 355 Locations in genome: 85832875 85832863 85832854 85832850 85832847 85832842 85832836 85832829 85832826 85832820 85832818 85832811 85832805 85832803 85832800 85832797 85832791 85832789 85832769 85832766 85832765 85832760 85832757 85832739 85832737 85832715 85832714 85832707 85832700 85832692 85832689 85832688 85832686 85832683 85832682 85832671 85832670 Upstream nucleotide (in genome): a a t c c a c c c c g g c a a a c c g c g c c c t c g t c t t g a t g t g Upstream nucleotide summary: a: 7, c: 15, g: 8, t: 7, other: 0 Downstream nucleotide (in genome): g a c g c t c c t g c t a a c a c t g g c g c t g g c g c c g a g g c g t Downstream nucleotide summary: a: 5, c: 13, g: 13, t: 6, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 2, at: 1, ca: 1, cc: 6, cg: 5, ct: 3, ga: 1, gc: 4, gg: 1, gt: 2, ta: 0, tc: 2, tg: 5, tt: 0, other: 0 >chr16:85832669-85833023 (-) gcggccgcgccatcaatcgccgccgcctcgtcccgcttctcggctgaggcgccgcgcggccaggcagcgggtccaggcctcagccgcgcgcccaggggcctccggggccctcccgggtcagcatgcccggggtgaaactgaccacccaggcctactgcaagatggtgctgcacggcgccaagtacccgcactgcgccgtcaacgggctcctggtggccgagaagcagaagccgcgtaaggagcacctccccctgggcgg-ccccggcgcccaccacaccctcttcgtggactgcatccccctcttccacggcaccctggccctcgcccccatgctggaggtggctctcaccctggt >BE045391:1-356 (+) gcggccgcgccatcaatcgccgccgcctcgtcccgcttctcggctgaggcgccgcgcggccaggcagcgggtccaggcctcagccgcgcgcccaggggcctccggggccctcccgggtcancatgcccggggtgaaactgaccacccaagcctactgcaaaatggtgctacacagcaccaaatacccacactgcaccatcaacagactcctgatggccaaaaaacaaaanccacataaggagcacctccccctgagcaagccccagcacccaccacaccctcttcatagactgcatccccctcttccacaacaccctagccctcacccccatactaaaagtaactctcaccctaat End editing Edited EST: BE350858, type: ga Aligns to: chr16:2285215-2285741 (-+) All mismatches: ga (33), ga (122), ga (152), ga (158), ga (161), ga (173), ga (176), ga (179), ga (183), ga (210), ga (215), ga (218), ga (223), ga (227), ga (242), ga (248), ga (258), ga (279), ga (288), ga (309), ga (311), ga (316), ga (329), ga (332), ga (339), ga (341), ga (348), ga (366), ga (370), ga (377), ga (379), ga (386), ga (392), ga (395), ga (398), ga (401), ga (402), ga (404), ga (405), ga (409), ga (412), ga (418), ga (419), ga (420), ga (425), ga (427), ga (430), ga (438), ga (444), ga (445), ga (447), gc (450), ga (455), ga (459), ga (462), ga (467), ga (468), ga (470), ga (471), ga (475), ga (476), ga (478), at (481), ga (482), ga (486), ga (489), ga (493), ga (498), ga (501), ga (514), ga (517), ga (519), ga (523), Editing mismatches: 71, all mismatches: 73, alignment length: 529, cluster length: 489, total number of Gs: 148 Locations in RNA: 33 122 152 158 161 173 176 179 183 210 215 218 223 227 242 248 258 279 288 309 311 316 329 332 339 341 348 366 370 377 379 386 392 395 398 401 402 404 405 409 412 418 419 420 425 427 430 438 444 445 447 455 459 462 467 468 470 471 475 476 478 482 486 489 493 498 501 514 517 519 523 Locations in genome: 2285710 2285621 2285591 2285585 2285582 2285570 2285567 2285564 2285560 2285533 2285528 2285525 2285520 2285516 2285501 2285495 2285485 2285464 2285455 2285434 2285432 2285427 2285414 2285411 2285404 2285402 2285395 2285377 2285373 2285366 2285364 2285357 2285351 2285348 2285345 2285342 2285341 2285339 2285338 2285335 2285332 2285326 2285325 2285324 2285319 2285317 2285314 2285306 2285300 2285299 2285297 2285289 2285285 2285282 2285277 2285276 2285274 2285273 2285270 2285269 2285267 2285263 2285259 2285256 2285252 2285247 2285244 2285231 2285228 2285226 2285222 Upstream nucleotide (in genome): a a g c a a c t c c c t a c g c t g a g c a c t c a c t a c g c t t t c g c g a c t g g a c c c t g t t c t t g t g c g c a t t c t t t t t t Upstream nucleotide summary: a: 12, c: 23, g: 13, t: 23, other: 0 Downstream nucleotide (in genome): a a a c a a a a t a a a c c a a a c t c g c c a a g t t g g g a a g t g c g c c c g g c c c t t g t a c a a g t g c g c c c g c a c c a t g t Downstream nucleotide summary: a: 22, c: 22, g: 16, t: 11, other: 0 Dinucleotide summary: aa: 4, ac: 5, ag: 2, at: 1, ca: 8, cc: 6, cg: 5, ct: 4, ga: 2, gc: 7, gg: 2, gt: 2, ta: 8, tc: 4, tg: 7, tt: 4, other: 0 >chr16:2285215-2285741 (-) caggttctcatgttttattgtaaagcaacaagaaactcttatgtacactgtccgtcttggggcgcctccatcctgtgccatcttctctaccaggccaggcaggcatgggtggggcgctcagagtcctctgccctgtccctgcccggccaggaccccgcagacctcatgctagacgatgaccgtctgcacctccagctggccctccggcgaggcgatgaccagctcgcctgcatgctccaggatctcgatgtcctctgatgacaccatggtcacagtggcctgttcagtgccacttgtccctgcccgggcggcaagcacagtgccctcgctgatggccgaggccagcgtcatggccacctgctctgtcaggctctcgggggtggcgatggtgatggtgtcggcgg-cagccgcctctgggcccagcgccgtctcctcgtccatggtgacgttctgcacgatgatctggtgg-ccggcgctagcctggtgcacgatctgctgcaccaccttcatgatgtggctgtccacct >BE350858:2-530 (+) caggttctcatgttttattgtaaagcaacaaaaaactcttatgtacactgtccgtcttggggcgcctccatcctgtgccatcttctctaccaggccaggcaggcatgggtggggcgctcaaagtcctctgccctgtccctgcccggccagaaccccacaaacctcatgctaaacaataaccatctgcacctccagctggccctccggcaaggcaataaccaactcacctgcatgctccagaatctcaatgtcctctaatgacaccatggtcacagtgacctgttcaatgccacttgtccctgcccggacagcaaacacagtgccctcactaatggccaaagccancatcatggccacctgctctatcaagctctcagaggtggcaatggtaatagtatcaacaagcaaccacctctaaacccaacaccatctcctcatccataataaccttctacacaataatctaataaaccaacacttacctagtacacaatctactacaccaccttcataatatagctatccacct End editing Edited EST: AA603385, type: ag Aligns to: chr16:67252249-67252518 (-+) All mismatches: ag (13), ag (17), ag (30), ag (41), ag (49), ag (53), ag (64), ag (68), ag (93), ga (127), ag (129), ag (135), ag (170), ag (216), ag (240), ag (242), ag (250), ag (261), ag (268), ag (270), Editing mismatches: 19, all mismatches: 20, alignment length: 267, cluster length: 261, total number of As: 87 Locations in RNA: 13 17 30 41 49 53 64 68 93 129 135 170 216 240 242 250 261 268 270 Locations in genome: 67252513 67252509 67252496 67252485 67252477 67252473 67252461 67252457 67252432 67252394 67252388 67252353 67252307 67252283 67252281 67252273 67252262 67252255 67252253 Upstream nucleotide (in genome): t c c c c a c g c g a t c a g a t a t Upstream nucleotide summary: a: 5, c: 7, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): c g g t g g g g g a a t g g t c c t c Downstream nucleotide summary: a: 2, c: 4, g: 9, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 1, ca: 0, cc: 0, cg: 6, ct: 1, ga: 1, gc: 0, gg: 1, gt: 1, ta: 0, tc: 3, tg: 0, tt: 1, other: 0 >chr16:67252249-67252518 (-) cagctactcaggaggctgaggcaggagaatggcatgaacccaggaagcggagcttgcagtgagccgagattgcaccactgcactccagccagtctgggcaagactccatctcaaaaaaaaaaggaaaaaaaaaaaaaaagaggccgcgtgcagtggctcacacctataatcccagcactttgggaggccaaggtgggtggatcacatggtcaggagttcaagaccatcctggccaagatggtgaaaccccgtctctactaaaaatacaaa >AA603385:8-274 (+) cagctgctcgggaggctgaggcgggagaatggcgtgaacccgggaggcggag-ttgcggtgggccgagattgcaccactgcactccggccagtctgggcaagactccatctc--aaaaaaaaaggaaaaagaaaaaaaagaggccgcgtgcagtggctcacacctgtaatcccagcactttgggaggccaaggtgggtggatcacatggtcgggagttcaagaccatcctggccagggtggtgaagccccgtctctgctaaaagtgcaaa End editing Edited EST: F07159, type: ag Aligns to: chr17:620140-620477 (-+) All mismatches: ag (67), ag (157), ag (194), ag (201), ag (202), ag (212), ag (217), ag (218), ag (276), ag (285), ag (289), ag (334), Editing mismatches: 12, all mismatches: 12, alignment length: 339, cluster length: 268, total number of As: 54 Locations in RNA: 67 157 194 201 202 212 217 218 276 285 289 334 Locations in genome: 620411 620321 620284 620277 620276 620266 620261 620260 620202 620193 620189 620144 Upstream nucleotide (in genome): t g a c a c c a t t t g Upstream nucleotide summary: a: 3, c: 3, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): t g t a t c a c t g g c Downstream nucleotide summary: a: 2, c: 3, g: 3, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 2, ca: 2, cc: 1, cg: 0, ct: 0, ga: 0, gc: 1, gg: 1, gt: 0, ta: 0, tc: 0, tg: 2, tt: 2, other: 0 >chr17:620140-620477 (-) atcaagtcagtggttgccagtggatggggtgaggcaagagggaatttgggggaatgaaattgtcctataactagattgtggtagtagttacatggttatatacatttatttattttgttttattattgttttcttattatttgtttgtttgttttgagatggagtcttgctctgtcacccaggctggagtgcaatggtgcaatcttggctcactgcaacctccacctctcgggttcaagtgattctgtgcaccaccacggccagctacgttttgtatttttagtagatagagacgggttttaccatgttggccaggctggtctcgaacccctga-cctc >F07159:1-339 (+) atcaagtcagtggttgccagtggatggggtgaggcaagagggaatttgggggaatgaaattgtcctgtaactagattgtggtagtagttacatggttatatacatttatttattttgttttattattgttttcttattatttgtttgtttgttttgggatggagtcttgctctgtcacccaggctggagtgcagtggtgcggtcttggctcgctgcggcctccacctctcgggttcaagtgattctgtgcaccaccacggccagctacgttttgtgtttttagtggatggagacgggttttaccatgttggccaggctggtctcgaacccctggacctc End editing Edited EST: DA089951, type: ag Aligns to: chr17:4832985-4833477 (-+) All mismatches: ag (95), ag (147), ag (157), ag (172), ag (199), ag (263), ag (265), ag (273), ag (277), ag (299), ag (305), ag (309), ag (312), ag (326), ag (329), ag (334), ag (346), ag (353), Editing mismatches: 18, all mismatches: 18, alignment length: 494, cluster length: 258, total number of As: 68 Locations in RNA: 95 147 157 172 199 263 265 273 277 299 305 309 312 326 329 334 346 353 Locations in genome: 4833385 4833334 4833324 4833309 4833282 4833218 4833216 4833208 4833204 4833182 4833176 4833172 4833169 4833155 4833152 4833147 4833135 4833128 Upstream nucleotide (in genome): c c c c c t c t c t c t t c g c c c Upstream nucleotide summary: a: 0, c: 12, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): c g c g c c a g g a g c g g g g g t Downstream nucleotide summary: a: 2, c: 5, g: 10, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 1, cc: 3, cg: 7, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr17:4832985-4833477 (-) tgcttccctgcaacagcctccttgctggtctcccaacttcccaattccctttcttctctttattctccactggagtggtctttcagaactgcacatttgctcatatccttccactgcttgaaatccaccaatgggccaggcac-agtggctcacacctgtaatcctagcagtttgggaggccgaggcgggtggatcacctgaggtcaggggtttgagaccagcctggccaacatggtgaaaacccatctctactaaatatacaaaaaattagccagacgtggtggccggcacctgtaatcccagctactagggaggctgaggcaggagaacagcttgagccccagggggcataggttgcagtgagctgagatcacaccccctcactccagcctgggcgaaagagcgaaattctgtctctaaataaataaataaattcaccaatggctcctcatagatctcaggagaaagtctaaagttcccaacatggcctgca >DA089951:3-496 (+) tgcttccctgcaacagcctccttgctggtctcccaacttcccaattccctttcttctctttattctccactggagtggtctttcagaactgcgcatttgctcatatccttccactgcttgaaatccaccaatgggccaggcactggtggctcacgcctgtaatcctagcggtttgggaggccgaggcgggtggatcgcctgaggtcaggggtttgagaccagcctggccaacatggtgaaaacccatctctactaaatatgcgaaaaattggccggacgtggtggccggcacctgtgatcccggctgctggggaggctgaggcgggggaacggcttgagccccggggggcgtaggttgcagtgagctgagatcacaccccctcactccagcctgggcgaaagagcgaaattctgtctctaaataaataaataaattcaccaatggctcctcatagatctcaggagaaagtctaaagttcccaacatggcctgca End editing Edited EST: DA383864, type: ag Aligns to: chr17:37335481-37336074 (-+) All mismatches: ag (35), ag (140), ag (158), ag (167), ag (247), ag (249), ag (257), ag (293), ag (317), ga (328), ag (349), ag (353), ag (363), ag (365), ag (369), ag (398), ag (401), ag (418), ag (463), ag (478), ag (567), Editing mismatches: 20, all mismatches: 21, alignment length: 593, cluster length: 534, total number of As: 94 Locations in RNA: 35 140 158 167 247 249 257 293 317 349 353 363 365 369 398 401 418 463 478 567 Locations in genome: 37336040 37335935 37335917 37335908 37335828 37335826 37335818 37335782 37335758 37335726 37335722 37335712 37335710 37335706 37335677 37335674 37335657 37335612 37335597 37335507 Upstream nucleotide (in genome): t c c a g c c c c c t t c c t t t c a a Upstream nucleotide summary: a: 3, c: 10, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): c g g a c g c g g a g c g c g g t c g g Downstream nucleotide summary: a: 2, c: 6, g: 11, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 0, ca: 1, cc: 3, cg: 6, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 2, tg: 3, tt: 1, other: 0 >chr17:37335481-37336074 (-) ttttcatgcctcagcctcgtgagtagctgggactacaggcatgtgctaccacgccaagctaatttttgtattattattattttttaataaagacagggtttcaccatgatggccaggctggtcttgaactcctggcctcaggtgatccacccgcctcagcctcccaaagtactgggattacaggtgtgagccactgcgcccggcctagttttctttctttctttctttcttttttttttttttgagacagagtctcactctgtcgctcaggttggagtgcagtggcgatctcagctcactgcaagctccgcctcccaggttcacgccgttctcctgcctcagcctcccaagtagctgggtctacaggcacctgccaccatgcccggctaatttttttagtagagacggggtttcactatgttggccaggatggtcttgatctcctgacctcgtgatccacccaccttggcctcccaaagtgctgggattataggcatgagccactgcacccggccctctttttttttttttttttttttttgagacggagtcttgctctgttgtccaagctggagtgcagtggcaccatctcgg >DA383864:1-593 (+) ttttcatgcctcagcctcgtgagtagctgggactgcaggcatgtgctaccacgccaagctaatttttgtattattattattttttaataaagacagggtttcaccatgatggccaggctggtcttgaactcctggcctcgggtgatccacccgcctcggcctcccagagtactgggattacaggtgtgagccactgcgcccggcctagttttctttctttctttctttcttttttttttttttgaggcggagtctcgctctgtcgctcaggttggagtgcagtggcgatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtggctgggtctgcgggcgcctgccaccatgcccggctaatttttttggtggagacggggtttcactgtgttggccaggatggtcttgatctcctgacctcgtgatccacccgccttggcctcccaaggtgctgggattataggcatgagccactgcacccggccctctttttttttttttttttttttt-gagacggagtcttgctctgttgtccaggctggagtgcagtggcaccatctcgg End editing Edited EST: DB128678, type: ag Aligns to: chr17:62407791-62408022 (-+) All mismatches: tc (100), ag (104), ag (109), ag (119), ag (120), ag (133), ag (139), ag (140), ag (169), ag (170), ag (179), ag (213), ag (219), ag (222), ag (236), Editing mismatches: 14, all mismatches: 15, alignment length: 232, cluster length: 133, total number of As: 28 Locations in RNA: 104 109 119 120 133 139 140 169 170 179 213 219 222 236 Locations in genome: 62407949 62407944 62407934 62407933 62407920 62407914 62407913 62407884 62407883 62407874 62407840 62407834 62407831 62407817 Upstream nucleotide (in genome): g c c a t c a t a t t t t c Upstream nucleotide summary: a: 3, c: 4, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): t g a c g a g a c c t g g c Downstream nucleotide summary: a: 3, c: 4, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 0, ca: 2, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 1, tg: 3, tt: 1, other: 0 >chr17:62407791-62408022 (-) atgtgctactaatttttttttttttttgagatggagtcttgctgtgtcgcccaggctggagtgcagtggtgcgatctcagctcactgcaacctctgcctcctaggttcaagcgattctcccgcctcagcctcccgagtaactgggactacaggtgcccaccaccacgcctggctaattttgtatttttagtagagatgggatttcaccatgttggccaggctggtctcctgg >DB128678:31-262 (+) atgtgctactaatttttttttttttttgagatggagtcttgctgtgtcgcccaggctggagtgcagtggcgcggtctcggctcactgcggcctctgcctcctgggttcgggcgattctcccgcctcagcctcccgagtggctgggactgcaggtgcccaccaccacgcctggctaattttgtgtttttggtggagatgggatttcgccatgttggccaggctggtctcctgg End editing Edited EST: DB136124, type: ag Aligns to: chr17:42255696-42256140 (-+) All mismatches: ag (32), ag (38), ag (40), ag (48), ag (53), ag (54), ag (77), ag (131), ag (136), ag (140), ag (172), ag (179), ag (191), ag (192), ag (208), ag (215), ag (218), ag (224), ag (237), ag (243), ag (265), ag (276), ag (283), Editing mismatches: 23, all mismatches: 23, alignment length: 445, cluster length: 252, total number of As: 66 Locations in RNA: 32 38 40 48 53 54 77 131 136 140 172 179 191 192 208 215 218 224 237 243 265 276 283 Locations in genome: 42256109 42256103 42256101 42256093 42256088 42256087 42256064 42256010 42256005 42256001 42255969 42255962 42255950 42255949 42255933 42255926 42255923 42255917 42255904 42255898 42255876 42255865 42255858 Upstream nucleotide (in genome): a a c g c a c a c c t a c a t t a c t c c t c Upstream nucleotide summary: a: 7, c: 10, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): t c c g a g g a g g c g a g g g g g g c g g a Downstream nucleotide summary: a: 4, c: 4, g: 14, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 4, at: 1, ca: 3, cc: 2, cg: 5, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 4, tt: 0, other: 0 >chr17:42255696-42256140 (-) aggcaaccaggcgcagtggctcatgcctgtaatcccaacactttgggaggccaaggcgggtggatcacctgaggtcagtgtgagaccagcctggccaacatggtgagaccctgtctctactaaaaatacaaaatcagccaggtgtggtgactcatgcctgtagtcccagctactcggaagtttggggcacaagaatcgcttgaacctaggtggtagaagttgcagtgagccgagatagcgccactgcactccagcctgggcaacagagtgagactaggtctcaaaaagaaaagaaaagagggccaggaactggtcctccgcagttggaggcggggacaggtgggaggggcagaacacaccatgggacagcctgacatggggttcactggatgcacccctccacacgcagcagcaggtagtccctgaggagcgggggcagtggcag >DB136124:1-445 (+) aggcaaccaggcgcagtggctcatgcctgtagtcccagcgctttggggggccggggcgggtggatcacctgaggtcggtgtgagaccagcctggccaacatggtgagaccctgtctctactaaaaatacagaatcggccgggtgtggtgactcatgcctgtagtcccagctgctcggaggtttggggcacgggaatcgcttgaacctgggtggtggaggttgcggtgagccgagatggcgccgctgcactccagcctgggcaacggagtgagactgggtctcgaaaagaaaagaaaagagggccaggaactggtcctccgcagttggaggcggggacaggtgggaggggcagaacacaccatgggacagcctgacatggggttcactggatgcacccctccacacgcagcagcaggtagtccctgaggagcggnggcagtggcag End editing Edited EST: DW411279, type: ag Aligns to: chr17:17168719-17169034 (-+) All mismatches: ag (48), ag (65), ag (66), ag (71), ag (87), ag (101), ag (111), ag (122), ag (144), ag (145), ag (159), ag (160), ag (163), ag (165), ag (170), ag (171), ag (174), ag (200), ag (201), ag (206), ag (222), ag (233), ag (236), ag (241), ag (242), ag (271), ag (319), Editing mismatches: 27, all mismatches: 27, alignment length: 314, cluster length: 274, total number of As: 69 Locations in RNA: 48 65 66 71 87 101 111 122 144 145 159 160 163 165 170 171 174 200 201 206 222 233 236 241 242 271 319 Locations in genome: 17169003 17168986 17168985 17168980 17168964 17168950 17168940 17168929 17168907 17168906 17168892 17168891 17168888 17168886 17168881 17168880 17168877 17168851 17168850 17168845 17168829 17168818 17168815 17168810 17168809 17168780 17168730 Upstream nucleotide (in genome): g t a t c c c g a a t a a t a a t t a c t a c g a g c Upstream nucleotide summary: a: 10, c: 6, g: 4, t: 7, other: 0 Downstream nucleotide (in genome): g a t g a c g c a c a a t c a t g a t g a t c a c g a Downstream nucleotide summary: a: 10, c: 6, g: 6, t: 5, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 0, at: 5, ca: 2, cc: 2, cg: 2, ct: 0, ga: 1, gc: 1, gg: 2, gt: 0, ta: 4, tc: 1, tg: 2, tt: 0, other: 0 >chr17:17168719-17169034 (-) agctttttataaagaaatgctcccccaggtgaggtggctcacgcctgtaatcctagcacattcggaggccaaggtggacggatcacttgaggtcaggagttcgagaccagcctggctaatgtggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggtgcacgcctgtaatcccagctactcgggaggctaatgcaggagaatcacttgaacccgggaggtggaggttgcagtgagctgagatgacgccactgcactccagcctgtgtgacagagtgagactccatttcaaaaaaaaaaaa >DW411279:17-330 (+) agctttttataaagaaatgctcccccaggtggggtggctcacgcctgtggtcctggcacattcggaggccgaggtggacggatcgcttgaggtcgggagttcgaggccagcctggctaatgtggtgaggccctgtctctactggaagtgcaaaggttggctgggtgtggtggtgcacgcctgtggtcccggctactcgggaggctgatgcaggagagtcgcttgggcccgggaggtggaggttgcagtgagctgggatgacgccactgcactccagcctgtgtgacagagtgagactccatt--gaaaaaaaaaaa End editing Edited EST: DW412628, type: ag Aligns to: chr17:42513014-42513321 (-+) All mismatches: ag (55), ag (56), ag (59), ag (69), ag (113), ag (116), ag (119), ag (132), ag (139), ag (152), ag (159), ag (164), ag (169), ag (192), ag (204), ag (213), ag (271), ag (279), ag (280), ag (285), ag (288), ag (296), ag (306), ag (307), ag (310), ag (312), ag (315), Editing mismatches: 27, all mismatches: 27, alignment length: 308, cluster length: 261, total number of As: 58 Locations in RNA: 55 56 59 69 113 116 119 132 139 152 159 164 169 192 204 213 271 279 280 285 288 296 306 307 310 312 315 Locations in genome: 42513282 42513281 42513278 42513268 42513224 42513221 42513218 42513205 42513198 42513185 42513178 42513173 42513168 42513145 42513133 42513124 42513066 42513058 42513057 42513052 42513049 42513041 42513031 42513030 42513027 42513025 42513022 Upstream nucleotide (in genome): t a t t t a c t c a g c g c t g c t a c c g c a c g c Upstream nucleotide summary: a: 5, c: 10, g: 5, t: 7, other: 0 Downstream nucleotide (in genome): a g g c g a g t g c c g c g c g c a t g c g a g g t c Downstream nucleotide summary: a: 4, c: 8, g: 12, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 1, ca: 1, cc: 3, cg: 6, ct: 0, ga: 0, gc: 2, gg: 2, gt: 1, ta: 2, tc: 2, tg: 2, tt: 1, other: 0 >chr17:42513014-42513321 (-) gggttcaagggattctcctgtctcctgtctcagccttctaagtagctgggattacaggcgcatgacaccatgcccgggtaatttttgtgtttttagtagaaacagggtttcatcatattggtcaggctggtcttgaactcttgacctcaggtgacccgcccgcctcggcctcccacagtgctgggattacaggtgtgagccactgtgcccagcctcaattttcaaagaattaggagtcgctgggcgcagtggctcacgcctgtaatcccagcactgtgggaggccgagacaagcagatcacctgaggt >DW412628:16-323 (+) gggttcaagggattctcctgtctcctgtctcagccttctgggtggctgggattgcaggcgcatgacaccatgcccgggtaatttttgtgtttttagtggagacggggtttcatcatgttggtcgggctggtcttgagctcttggcctcgggtggcccgcccgcctcggcctcccacggtgctgggattgcaggtgtgggccactgtgcccagcctcaattttcaaagaattaggagtcgctgggcgcagtggctcgcgcctgtggtcccggcgctgtggggggccgagacgggcgggtcgcctgaggt End editing Edited EST: DW413496, type: ag Aligns to: chr17:77725551-77725851 (-+) All mismatches: ag (37), ag (81), ag (110), ag (115), ag (120), ag (130), ag (144), ag (150), ag (185), ag (186), ag (192), ag (208), ag (212), ag (226), ag (231), tc (304), ag (307), Editing mismatches: 16, all mismatches: 17, alignment length: 301, cluster length: 271, total number of As: 72 Locations in RNA: 37 81 110 115 120 130 144 150 185 186 192 208 212 226 231 307 Locations in genome: 77725831 77725787 77725758 77725753 77725748 77725738 77725724 77725718 77725683 77725682 77725676 77725660 77725656 77725642 77725637 77725561 Upstream nucleotide (in genome): t c c t a a t t t a a g c g c a Upstream nucleotide summary: a: 5, c: 4, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): g g g g c c a c a t c g g a g a Downstream nucleotide summary: a: 4, c: 4, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 0, at: 1, ca: 0, cc: 0, cg: 4, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 2, tt: 0, other: 0 >chr17:77725551-77725851 (-) ataacagggccaggcacagtagctcatgcctgtaatcccagcactttgagaggctgagactggcagatcacctgaggtcaggagtttgagaccagactagccaacatggtgaaaccccgtctctactaaaaatacaaaggttagctgggcgtggtggtgtgagcctgtaatcccaactactagggaggctgaggcaggagaatcacttgaacccaggaggtgaaggttgcagtgagctgagattgcgccactgcactgcagcctgggagacagagggaggctctgtctcaaaaaaaaaaaa >DW413496:17-317 (+) ataacagggccaggcacagtggctcatgcctgtaatcccagcactttgagaggctgagactggcggatcacctgaggtcaggagtttgagaccggactggccagcatggtgaagccccgtctctactgaaaatgcaaaggttagctgggcgtggtggtgtgagcctgtggtcccagctactagggaggctggggcgggagaatcacttggacccgggaggtgaaggttgcagtgagctgagattgcgccactgcactgcagcctgggagacagagggaggctctgtcccagaaaaaaaaaa End editing Edited EST: DW416557, type: ag Aligns to: chr17:37396634-37396926 (-+) All mismatches: ag (123), gc (138), ag (146), ag (181), ag (186), ag (221), ag (224), ag (225), ag (245), ag (253), ag (264), ag (279), ag (280), ag (293), Editing mismatches: 13, all mismatches: 14, alignment length: 293, cluster length: 171, total number of As: 47 Locations in RNA: 123 146 181 186 221 224 225 245 253 264 279 280 293 Locations in genome: 37396820 37396797 37396762 37396757 37396722 37396719 37396718 37396698 37396690 37396679 37396664 37396663 37396650 Upstream nucleotide (in genome): c a c g g a a t t g t a c Upstream nucleotide summary: a: 4, c: 3, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): g t c g g a c c g t a t g Downstream nucleotide summary: a: 2, c: 3, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 2, ca: 0, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 2, gt: 1, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr17:37396634-37396926 (-) ataatcccgtgaaaaacagtgaaagagtccaactttagagtgaggaaactaaggctcacagaggctacaggacctgggtaagatccatgctaagaagtggtaaggcaggcacggtgggtcagtcttgtaatcccagcactttgggaggctgaggtgggtggatcacctgaggttgagagttcaagaccagcctgaccaacatggagaaaccctgtctctactaaaaatacaaaattagacgggcatgatggcgcatgcctgtaatcccagctactcaggaggctgaggtagga >DW416557:17-309 (+) ataatcccgtgaaaaacagtgaaagagtccaactttagagtgaggaaactaaggctcacagaggctacaggacctgggtaagatccatgctaagaagtggtaaggcgggcacggtgggtcactcttgtagtcccagcactttgggaggctgaggtgggtggatcgcctggggttgagagttcaagaccagcctgaccaacatggggaggccctgtctctactaaaaatgcaaaattggacgggcatggtggcgcatgcctgtggtcccagctactcgggaggctgaggtagga End editing Edited EST: DW419202, type: ag Aligns to: chr17:43105823-43106224 (-+) All mismatches: ag (45), ga (46), ag (64), ag (74), ac (96), ag (146), ag (151), ag (176), ag (178), ag (179), ag (184), ag (187), ag (224), ag (244), ag (248), ag (250), ag (257), ag (258), ct (261), ag (263), ag (269), ag (273), ag (274), ag (278), ag (284), ag (288), ag (292), ag (314), ag (315), ag (320), ag (337), ag (344), ag (356), ag (360), ag (367), ag (377), ag (384), ag (385), ag (400), Editing mismatches: 36, all mismatches: 39, alignment length: 405, cluster length: 354, total number of As: 106 Locations in RNA: 45 64 74 146 151 176 178 179 184 187 224 244 248 250 257 258 263 269 273 274 278 284 288 292 314 315 320 337 344 356 360 367 377 384 385 400 Locations in genome: 43106183 43106165 43106155 43106083 43106078 43106053 43106051 43106050 43106045 43106042 43106005 43105985 43105981 43105979 43105972 43105971 43105966 43105960 43105956 43105955 43105951 43105946 43105942 43105938 43105916 43105915 43105910 43105893 43105886 43105874 43105870 43105863 43105853 43105846 43105845 43105830 Upstream nucleotide (in genome): c c a a a t t a c c c g a c a a c t a a t a t c t a c g g a c c a c a c Upstream nucleotide summary: a: 14, c: 13, g: 3, t: 6, other: 0 Downstream nucleotide (in genome): g g g a g t a t g c g c c t a c t c a a c a g g a t g g g c g g t a g c Downstream nucleotide summary: a: 8, c: 8, g: 14, t: 6, other: 0 Dinucleotide summary: aa: 5, ac: 3, ag: 3, at: 3, ca: 1, cc: 2, cg: 8, ct: 2, ga: 0, gc: 1, gg: 2, gt: 0, ta: 2, tc: 2, tg: 1, tt: 1, other: 0 >chr17:43105823-43106224 (-) ggcgggcacctgtaatctcagccgcttgggaggctgaggcc-agagaatcgcttgaaccc-aggaggtggaagttgcagtgagcagagattgcaccattgcactccagcctgggcgacaagagtgagcaaaactccatctcaaaaaaaaggctgggtgcagtggctcatgcctataatcccagcactttgggaggccgaggcaggtggatcacctgaggtcaggagttcgagagcggcatgaccaacatggagaaaccccatctctactaaaaatac-aaaaattagccaggcatggtggtgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgcaatgagccaagatcgtaccattgcactccagc >DW419202:3-407 (+) ggcgggcacctgtaatctcagccgcttgggaggctgaggccagaagaatcgcttgaacccggggaggtggaggttgcagtgagcagagattgccccattgcactccagcctgggcgacaagagtgagcaaaactccatctcaagaaaagggctgggtgcagtggctcatgcctgtggtcccggcgctttgggaggccgaggcaggtggatcacctgaggtcgggagttcgagagcggcatggccagcgtggagaggcctcgtctctgctaggaatgcaaaagattggccgggcatggtggtgcatgcctgtggtcccggctacttgggaggctggggcaggggaatcacttgagcccgggaggcggaggttgcagtgagccgggatcgtaccattgcgctccagc End editing Edited EST: DW422159, type: ag Aligns to: chr17:37422356-37422633 (-+) All mismatches: ag (26), ag (29), ag (37), ag (39), ag (40), ag (49), ag (66), ag (85), ag (123), ag (177), ag (192), ag (197), ca (273), Editing mismatches: 12, all mismatches: 13, alignment length: 279, cluster length: 171, total number of As: 58 Locations in RNA: 26 29 37 39 40 49 66 85 123 177 192 197 Locations in genome: 37422624 37422621 37422613 37422611 37422610 37422601 37422584 37422565 37422527 37422474 37422459 37422454 Upstream nucleotide (in genome): t c t t a t c c c a a c Upstream nucleotide summary: a: 3, c: 5, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g c t a t c g g c c t g Downstream nucleotide summary: a: 1, c: 4, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 2, ca: 0, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 1, other: 0 >chr17:37422356-37422633 (-) ggacgtggtagcacatgcctataatcccagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagctgagatcgtgccaccacactccagcctgggcaacagagcgagactatctccaaaaaaaa-aaaaaaacaacaaactagcctgtaatcccagctactcgggaggctgaggcacaagaatcacttgaacctgggaggtggaggttgcagtgagctgagatcatgccactgcactccaccctgagcaacag >DW422159:17-295 (+) ggacgtggtggcgcatgcctgtggtcccagctgcttgggaggctgaggcgggagaatcgcttgaacccgggaggtggaggttgcagtgagctgagatcgtgccaccgcactccagcctgggcaacagagcgagactatctccaaaaaaaacaaaaaaacagcaaactagcctgtagtcccggctactcgggaggctgaggcacaagaatcacttgaacctgggaggtggaggttgcagtgagctgagatcatgccaatgcactccaccctgagcaacag End editing Edited EST: DW423373, type: ag Aligns to: chr17:17168759-17169034 (-+) All mismatches: ag (48), ag (65), ag (66), ag (71), ag (87), ag (101), ag (111), ag (122), ag (144), ag (145), ag (159), ag (160), ag (163), ag (165), ag (170), ag (171), ag (174), ag (200), ag (201), ag (206), ag (222), ag (233), ag (236), ag (241), ag (242), ag (271), Editing mismatches: 26, all mismatches: 26, alignment length: 276, cluster length: 224, total number of As: 57 Locations in RNA: 48 65 66 71 87 101 111 122 144 145 159 160 163 165 170 171 174 200 201 206 222 233 236 241 242 271 Locations in genome: 17169003 17168986 17168985 17168980 17168964 17168950 17168940 17168929 17168907 17168906 17168892 17168891 17168888 17168886 17168881 17168880 17168877 17168851 17168850 17168845 17168829 17168818 17168815 17168810 17168809 17168780 Upstream nucleotide (in genome): g t a t c c c g a a t a a t a a t t a c t a c g a g Upstream nucleotide summary: a: 10, c: 5, g: 4, t: 7, other: 0 Downstream nucleotide (in genome): g a t g a c g c a c a a t c a t g a t g a t c a c g Downstream nucleotide summary: a: 9, c: 6, g: 6, t: 5, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 0, at: 5, ca: 1, cc: 2, cg: 2, ct: 0, ga: 1, gc: 1, gg: 2, gt: 0, ta: 4, tc: 1, tg: 2, tt: 0, other: 0 >chr17:17168759-17169034 (-) agctttttataaagaaatgctcccccaggtgaggtggctcacgcctgtaatcctagcacattcggaggccaaggtggacggatcacttgaggtcaggagttcgagaccagcctggctaatgtggtgaaaccctgtctctactaaaaatacaaaaattagctgggtgtggtggtgcacgcctgtaatcccagctactcgggaggctaatgcaggagaatcacttgaacccgggaggtggaggttgcagtgagctgagatgacgccactgcactccag >DW423373:17-292 (+) agctttttataaagaaatgctcccccaggtggggtggctcacgcctgtggtcctggcacattcggaggccgaggtggacggatcgcttgaggtcgggagttcgaggccagcctggctaatgtggtgaggccctgtctctactggaagtgcaaaggttggctgggtgtggtggtgcacgcctgtggtcccggctactcgggaggctgatgcaggagagtcgcttgggcccgggaggtggaggttgcagtgagctgggatgacgccactgcactccag End editing Edited EST: DW424072, type: ag Aligns to: chr17:35659155-35659435 (-+) All mismatches: ag (28), ag (37), ag (45), ag (53), ag (72), ag (77), ag (82), ag (106), ag (108), ag (130), ag (134), ag (136), ag (139), ag (145), ag (161), ag (172), ag (177), ag (181), ag (194), ag (204), ct (206), ag (244), ag (249), ag (269), ag (282), ag (289), Editing mismatches: 25, all mismatches: 26, alignment length: 281, cluster length: 262, total number of As: 65 Locations in RNA: 28 37 45 53 72 77 82 106 108 130 134 136 139 145 161 172 177 181 194 204 244 249 269 282 289 Locations in genome: 35659416 35659407 35659399 35659391 35659372 35659367 35659362 35659338 35659336 35659314 35659310 35659308 35659305 35659299 35659283 35659272 35659267 35659263 35659250 35659240 35659200 35659195 35659175 35659162 35659155 Upstream nucleotide (in genome): c a c g c g c a c t a t a t c a c t g a g g c a a Upstream nucleotide summary: a: 8, c: 8, g: 5, t: 4, other: 0 Downstream nucleotide (in genome): c t c g c g g c t a t c a g g t g c g t g g g g n Downstream nucleotide summary: a: 2, c: 6, g: 11, t: 5, other: 1 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 4, ca: 0, cc: 3, cg: 4, ct: 1, ga: 0, gc: 0, gg: 5, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 1 >chr17:35659155-35659435 (-) cggccgggtgtggtggctcacgcctgtaatcccagcactttgggaggctgaggtgggtggatcacctgaggtcaggagttcgagaccagtctggccaacatggttaaaccccatctctactaaaaatacaaatattagcctggcatggtggcagtcacctgtaatcccagctactcgggaggctgaggcgggagaatcgcttgaacccgggaggtggaggttgcagattgcagtgagccgagatcgcgccattgcactccagcctgggtcacaagagcgaa >DW424072:9-289 (+) cggccgggtgtggtggctcgcgcctgtagtcccagcgctttggggggctgaggtgggtggatcgcctggggtcgggagttcgagaccagtctggccagcgtggttaaaccccatctctactgaaagtgcagatattggcctggcatggtggcggtcacctgtagtcccggctgctcgggaggctggggcgggagagttgcttgaacccgggaggtggaggttgcagattgcagtgggccgggatcgcgccattgcactccggcctgggtcacaggagcgag End editing Edited EST: DW426171, type: ag Aligns to: chr17:73766205-73766475 (-+) All mismatches: ag (16), ag (50), ag (65), ag (89), ag (103), ag (177), ag (187), ag (203), ag (209), ag (227), ag (230), ag (244), ag (245), ag (256), ag (265), Editing mismatches: 15, all mismatches: 15, alignment length: 270, cluster length: 251, total number of As: 68 Locations in RNA: 16 50 65 89 103 177 187 203 209 227 230 244 245 256 265 Locations in genome: 73766473 73766438 73766423 73766399 73766385 73766311 73766301 73766285 73766279 73766261 73766258 73766244 73766243 73766232 73766223 Upstream nucleotide (in genome): g g t c c t t t c a c g a c c Upstream nucleotide summary: a: 2, c: 6, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): t g t a c g g a g g g a c g g Downstream nucleotide summary: a: 3, c: 2, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 1, cc: 1, cg: 4, ct: 0, ga: 1, gc: 0, gg: 1, gt: 1, ta: 1, tc: 0, tg: 2, tt: 1, other: 0 >chr17:73766205-73766475 (-) ggatgaagatgggtcaaatggtcatgttggccagctgaggtggctcacgcctataatcctagcactttgggaggccaaggcagacggatcacctgaggtcaggagtgtgagaccagcctggccaacacggtgaaaccctgtccctactaaaaattcaaaaaattagctgggcatagtggcacgtgcctgtaatcccagctacttgggaggctgaagcaggagaattgcttgaacctggtaggcagaggttgcagtgagctgagattgtgcc >DW426171:14-283 (+) ggg-gaagatgggtcaaatggtcatgttggccagctggggtggctcacgcctgtaatcctagcactttgggaggccgaggcagacggatcgcctgaggtcaggagtgtgagaccagcctggccaacacggtgaaaccctgtccctactaaaaattcaaaaaattggctgggcatggtggcacgtgcctgtgatcccggctacttgggaggctgaggcgggagaattgcttgggcctggtaggcggaggttgcggtgagctgagattgtgcc End editing Edited EST: DW428395, type: ag Aligns to: chr17:17871053-17871322 (-+) All mismatches: ag (10), tc (13), ag (15), cg (16), ag (136), ag (188), ag (189), ag (211), ag (212), ag (214), ag (219), ag (229), ag (230), ag (231), ag (232), ag (236), ag (237), ag (238), ag (243), ag (269), ag (270), ag (275), Editing mismatches: 20, all mismatches: 22, alignment length: 269, cluster length: 267, total number of As: 68 Locations in RNA: 10 15 136 188 189 211 212 214 219 229 230 231 232 236 237 238 243 269 270 275 Locations in genome: 17871320 17871314 17871193 17871141 17871140 17871118 17871117 17871115 17871110 17871100 17871099 17871098 17871097 17871093 17871092 17871091 17871086 17871060 17871059 17871054 Upstream nucleotide (in genome): c g a c a c a a c a a a a c a a t t a c Upstream nucleotide summary: a: 11, c: 6, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g c t a g a a c t a a a t a a a g a t g Downstream nucleotide summary: a: 10, c: 2, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 6, ac: 1, ag: 1, at: 3, ca: 3, cc: 0, cg: 2, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr17:17871053-17871322 (-) acagtctgacatagttaactgtgcatttcttgcatccatcccgccctttattctggagggcagttcctgagtagaaagcatggtttagggagagagtaagctggacaggtgcggtggctcacacctgtaatccagcactttgggaggccgtggcgggtggatcacctgaggttaggagttcaagaccagcctggttaatgtggcaaaaccccatctctactaaaaatacaaaaattagctgggcatggtggcacgcgcgtataatcccag >DW428395:8-276 (+) acgg-ccgggatagttaactgtgcatttcttgcatccatcccgccctttattctggagggcagttcctgagtagaaagcatggtttagggagagagtaagctggacaggtgcggtggctcacacctgtagtccagcactttgggaggccgtggcgggtggatcacctgaggttaggagttcgggaccagcctggttaatgtggcggagccccgtctctactaggggtacgggaattggctgggcatggtggcacgcgcgtatggtcccgg End editing Edited EST: DW430764, type: ag Aligns to: chr17:42517172-42517425 (-+) All mismatches: ct (40), ag (60), ag (79), ag (99), ag (117), ag (119), ag (135), ag (163), ag (170), ag (180), ag (183), ag (186), ag (195), ag (199), ag (253), ag (270), Editing mismatches: 15, all mismatches: 16, alignment length: 254, cluster length: 211, total number of As: 55 Locations in RNA: 60 79 99 117 119 135 163 170 180 183 186 195 199 253 270 Locations in genome: 42517383 42517364 42517344 42517326 42517324 42517308 42517280 42517273 42517263 42517260 42517257 42517248 42517244 42517190 42517173 Upstream nucleotide (in genome): g c a a t c t g c g a a c c c Upstream nucleotide summary: a: 4, c: 6, g: 3, t: 2, other: 0 Downstream nucleotide (in genome): g g c t c c c g g g t c g a t Downstream nucleotide summary: a: 1, c: 5, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 2, ca: 1, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 3, gt: 0, ta: 0, tc: 2, tg: 0, tt: 0, other: 0 >chr17:42517172-42517425 (-) gtaattccagcatttgggaggccgaggtgggcagatcacctgaggtcgggagtttgagaccagcctgaccaacatgaagaaaccccgtctttacgagaaatacagaattagccgggcacggtggtgcatgcctgtagccccagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggctgtggtgagctgagattgcgccattgcactccagcctgggcaacaagagcgaaactccat >DW430764:18-271 (+) gtaattccagcatttgggaggctgaggtgggcagatcacctggggtcgggagtttgagaccggcctgaccaacatgaagaagccccgtctttacgagaagtgcagaattagccgggcgcggtggtgcatgcctgtagccccagctgcttggggggctgaggcgggggagtcgcttgagcccgggaggtggaggctgtggtgagctgagattgcgccattgcactccagcctgggcgacaagagcgaaactccgt End editing Edited EST: DW433597, type: ag Aligns to: chr17:41268693-41268949 (-+) All mismatches: ag (10), ag (11), tc (12), ag (14), ag (16), ag (138), ag (140), ag (146), ag (147), ag (168), ag (169), ag (173), ag (192), ag (195), ag (200), ag (201), ag (206), ag (239), ag (241), ag (245), ag (251), ag (252), ag (255), Editing mismatches: 22, all mismatches: 23, alignment length: 256, cluster length: 247, total number of As: 92 Locations in RNA: 10 11 14 16 138 140 146 147 168 169 173 192 195 200 201 206 239 241 245 251 252 255 Locations in genome: 41268946 41268945 41268942 41268939 41268817 41268815 41268809 41268808 41268787 41268786 41268782 41268763 41268760 41268755 41268754 41268749 41268716 41268714 41268710 41268704 41268703 41268700 Upstream nucleotide (in genome): c a c c c c t a c a c c g c a c t a t a a c Upstream nucleotide summary: a: 7, c: 11, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): a t g a c c a t a g g g g a g g a a c a t g Downstream nucleotide summary: a: 8, c: 3, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 2, at: 3, ca: 4, cc: 2, cg: 5, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr17:41268693-41268949 (-) tacaatcagcaaaatccagaatgggggaaactccacaggtcaaatgacctaattttaaaaataaatgacaagggagaaaaagtaagagacacctatagatcagaagacacttggggctgggcatggtggctcacacctgtaatcccagcactttgggaggccaaggcaggcggatcacctgaggtcaggagttcaagaccagccggccaacatggtgaaaccccaactctactaaaaatacgaaaaatcagccgggc >DW433597:7-262 (+) tacggccgg-gaaatccagaatgggggaaactccacaggtcaaatgacctaattttaaaaataaatgacaagggagaaaaagtaagagacacctatagatcagaagacacttggggctgggcatggtggctcgcgcctgtggtcccagcactttgggaggccggggcgggcggatcacctgaggtcgggggttcgggaccggccggccaacatggtgaaaccccaactctactgagaatgcgaaaggtcggccgggc End editing Edited EST: DW434263, type: ag Aligns to: chr17:80589183-80589420 (-+) All mismatches: ag (30), ag (77), ag (88), ag (97), ag (112), ag (120), ag (138), ag (162), ag (181), ag (185), ag (201), ag (204), ag (205), ag (248), Editing mismatches: 14, all mismatches: 14, alignment length: 238, cluster length: 219, total number of As: 60 Locations in RNA: 30 77 88 97 112 120 138 162 181 185 201 204 205 248 Locations in genome: 80589407 80589360 80589349 80589340 80589325 80589317 80589299 80589275 80589256 80589252 80589236 80589233 80589232 80589189 Upstream nucleotide (in genome): c t c t t c t g a c c t a a Upstream nucleotide summary: a: 3, c: 5, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g g t a g t a g c g g a g g Downstream nucleotide summary: a: 3, c: 1, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 0, ca: 0, cc: 0, cg: 3, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 3, tc: 0, tg: 2, tt: 0, other: 0 >chr17:80589183-80589420 (-) gggaggccgaggcagactgatcgcctgagttcaggagtttgagatcagcctggccagcatagtgaaaccccatctctactaaaaatacaaaaattagctgggcatggtggcacatgcttgtaatcccaactacctggggaggctgaggcaggagagtggcttgaacccaggaggtggaggttgcagtaagccgagatcgcgcgactgcactctagcctgggtgacagagcaagactcc >DW434263:17-254 (+) gggaggccgaggcggactgatcgcctgagttcaggagtttgagatcagcctggccagcatggtgaaaccccgtctctactgaaaatacaaaaattggctgggcgtggtggcacatgcttgtgatcccaactacctggggaggctggggcaggagagtggcttgagcccgggaggtggaggttgcggtgggccgagatcgcgcgactgcactctagcctgggtgacagagcaggactcc End editing Edited EST: BM679831, type: ag Aligns to: chr17:74369055-74369517 (-+) All mismatches: ag (35), ag (43), ag (52), ag (58), ag (99), ag (100), ag (112), ag (187), ag (188), ag (193), ag (209), ag (245), ag (320), ag (326), ag (337), ag (343), ag (347), ag (353), ag (361), ag (362), ag (369), ag (375), ag (391), ag (401), ag (406), ag (411), ag (420), ag (425), ag (429), ga (457), ga (460), ag (462), Editing mismatches: 30, all mismatches: 32, alignment length: 462, cluster length: 428, total number of As: 116 Locations in RNA: 35 43 52 58 99 100 112 187 188 193 209 245 320 326 337 343 347 353 361 362 369 375 391 401 406 411 420 425 429 462 Locations in genome: 74369482 74369474 74369465 74369459 74369418 74369417 74369405 74369330 74369329 74369324 74369308 74369272 74369197 74369191 74369180 74369174 74369170 74369164 74369156 74369155 74369148 74369142 74369126 74369116 74369111 74369106 74369097 74369092 74369088 74369055 Upstream nucleotide (in genome): c t t c a a t t a c c c t c g g c a g a a g g c c c c g g c Upstream nucleotide summary: a: 6, c: 12, g: 7, t: 5, other: 0 Downstream nucleotide (in genome): c c g a a g c a t g a g g g g g g t a c g g g c c g g g g n Downstream nucleotide summary: a: 5, c: 6, g: 16, t: 2, other: 1 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 2, ca: 2, cc: 3, cg: 6, ct: 0, ga: 1, gc: 0, gg: 6, gt: 0, ta: 1, tc: 2, tg: 2, tt: 0, other: 1 >chr17:74369055-74369517 (-) tttttattttgtattttttctagagactgggtctcactctgttacccagactagtctcaaactcctggactcaagcaatctgcacacctcggcctcccaaagtgctgggattacaggcatgagtcacacctgatcaatttagtttttaaaagcatgcttggagccgggcgcggtggctcgcgactgtaatcccagcactttgggaggccaaggcgggcagatgacgagctcaggagttcgagaccagcctggccaacatggtgaaaccccatctgtactaaaaatacaaaaattagctgggcatagtggtgcgcgcctgtagtcccagcctcttgggaggctgaggcaggagaattgcttgaacctggaaggtggagtttgtggtgagccgagatcgtgccactgcactccagcctgggcagcagagcgagactccgtctcagaaaaaaaaaaaaaagaagca >BM679831:1-462 (+) ttttt-ttttgtattttttctagagactgggtctcgctctgttgcccagactggtctcgaactcctggactcaagcaatctgcacacctcggcctcccagggtgctgggattgcaggcatgagtcacacctgatcaatttagtttttaaaagcatgcttggagccgggcgcggtggctcgcgactgtggtcccggcactttgggaggccgaggcgggcagatgacgagctcaggagttcgagaccggcctggccaacatggtgaaaccccatctgtactaaaaatacaaaaattagctgggcatagtggtgcgcgcctgtggtcccggcctcttggggggctggggcgggagagttgcttgggcctggagggtggggtttgtggtgagccgggatcgtgccgctgcgctccggcctgggcggcagggcgggactccgtctcagaaaaaaaaaaaaaaaaaacg End editing Edited EST: BM687481, type: ag Aligns to: chr17:60552699-60553257 (-+) All mismatches: ag (77), ag (84), ag (106), ag (112), ag (128), ag (129), ag (133), ag (148), ag (152), ag (182), ag (184), ag (187), ag (197), ag (209), ag (280), ag (308), ag (309), ag (365), ag (381), ag (397), ag (402), ag (417), ag (423), ag (424), ag (429), ag (433), gt (459), ag (489), Editing mismatches: 27, all mismatches: 28, alignment length: 558, cluster length: 413, total number of As: 106 Locations in RNA: 77 84 106 112 128 129 133 148 152 182 184 187 197 209 280 308 309 365 381 397 402 417 423 424 429 433 489 Locations in genome: 60553188 60553181 60553159 60553153 60553137 60553136 60553132 60553117 60553113 60553083 60553081 60553078 60553068 60553056 60552985 60552957 60552956 60552900 60552884 60552868 60552863 60552848 60552842 60552841 60552836 60552832 60552776 Upstream nucleotide (in genome): a c t c t a c a c c c c c c c c a a a t g c t a c t g Upstream nucleotide summary: a: 7, c: 13, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): t g g g a g g c g c c c g g c a g c a g g c a t g g g Downstream nucleotide summary: a: 4, c: 7, g: 14, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 2, at: 2, ca: 1, cc: 5, cg: 7, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 0, tg: 3, tt: 0, other: 0 >chr17:60552699-60553257 (-) gaggtcaggaggtcgagaccatcctgtcttaacacggtgaaaccctgtctctactaaaaatacaaaaaaattagccaggcgtggtggcgggcgcctgtagtcccagctactcgggaggctaaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgagccgagatcacaccactgcactccagcctgggtgacagagcgagactccgtctcaaaaaaaataattattatttaaaataatcattgggcctggcgcggtggctcacacctgtaatcctagcactttgggaggccaaggcgggtggatcacgaggtcaggagattgagatccagcctggccaacatggtgaaaccccatctctgctaaaaatattttttaaattagctgagcgtggtggtgggcacctgtaatcccagctagtcgggagactgaggcaggagaatcgcttgaacctgggagtcgaaggttgcagtgagccgaggtcgtgccactgcagtccacctggccaacacagcaggcctctctctaaaataataattattattattgtta >BM687481:9-566 (+) gaggtcaggaggtcgagaccatcctgtcttaa-acggtgaaaccctgtctctactaaaaatacaaaaaagttagccgggcgtggtggcgggcgcctgtggtcccggctactcgggaggctggggcgggagaatcgcttgagcccgggaggcggaggttgcagtgagccgagatcgcgccgctgcactccggcctgggtgacggagcgagactccgtctcaaaaaaaataattattatttaaaataatcattgggcctggcgcggtggctcacgcctgtaatcctagcactttgggaggccggggcgggtggatcacgaggtcaggagattgagatccagcctggccaacatggtgaagccccatctctgctaagaatattttttaaattggctgggcgtggtggtgggcgcctgtggtcccggctggtcgggagactgaggcaggagaatctcttgaacctgggagtcgaaggttgcagtgggccgaggtcgtgccactgcagtccacctggccaacacagcaggcctctctctaaaataataattattattattgtta End editing Edited EST: BX505058, type: ag Aligns to: chr17:79529021-79529575 (-+) All mismatches: ag (18), ag (19), ag (52), ag (63), ag (68), ag (80), ag (105), ag (133), tc (170), ag (174), ag (179), ag (214), ag (322), ag (387), ag (407), ag (418), ag (440), ag (442), ag (479), ag (482), ag (534), Editing mismatches: 20, all mismatches: 21, alignment length: 556, cluster length: 516, total number of As: 98 Locations in RNA: 18 19 52 63 68 80 105 133 174 179 214 322 387 407 418 440 442 479 482 534 Locations in genome: 79529558 79529557 79529524 79529513 79529508 79529496 79529471 79529443 79529402 79529397 79529362 79529254 79529189 79529169 79529158 79529136 79529134 79529097 79529094 79529043 Upstream nucleotide (in genome): a a t c c c c t t g c g c t c t c t t c Upstream nucleotide summary: a: 2, c: 9, g: 2, t: 7, other: 0 Downstream nucleotide (in genome): a g g g c c g c g g a c c c g c g g g g Downstream nucleotide summary: a: 2, c: 7, g: 11, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 1, cc: 3, cg: 5, ct: 0, ga: 0, gc: 1, gg: 1, gt: 0, ta: 0, tc: 3, tg: 4, tt: 0, other: 0 >chr17:79529021-79529575 (-) ttgtttgttttgagacaaagtcttgttctgttgcccaggctggagtgcagtagtgtgatctcagctcactgcagcctccacctcccgggttcaagccattgtccagcctctgcctcctaagtagctggaattacaggtggctgccaccacacccagctaatttttttagttttagtagagacagggtttctccatgttggccaggctggtctcaaactcctgacctcaagtgatccacccacctcggcttcccaaagtgctgggattataggtgtgagccaccgcgcccggccctcatgggttgttttgttttgttttgagacggaatctcaccctgtcacccaggctgcagtgcaatctcatgatctccacttactgcaacctccacgtcctgggttcaagtgatactcctgcctcagcctcccgagtagctgggactacaggcgtgcacccacgcctggctaatttttatatttttagtagagatgggg-tttcaccatgttggtcaggctggtctggaactcctgacctcaggtgatccacctgcctcggtct >BX505058:1-556 (+) ttgtttgttttgagacagggtcttgttctgttgcccaggctggagtgcagtggtgtgatctcggctcgctgcagcctccgcctcccgggttcaagccattgtccggcctctgcctcctaagtagctggaattgcaggtggctgccaccacacccagctaatttttttagctttggtagggacagggtttctccatgttggccaggctggtctcgaactcctgacctcaagtgatccacccacctcggcttcccaaagtgctgggattataggtgtgagccaccgcgcccggccctcatgggttgttttgttttgttttgaggcggaatctcaccctgtcacccaggctgcagtgcaatctcatgatctccacttactgcaacctccgcgtcctgggttcaagtgatgctcctgcctcggcctcccgagtagctgggactgcgggcgtgcacccacgcctggctaatttttatatttttggtggagatgggggtttcaccatgttggtcaggctggtctggaactcctgacctcgggtgatccacctgcctcggtct End editing Edited EST: AW238973, type: ga Aligns to: chr17:79804308-79804507 (-+) All mismatches: ga (257), ga (263), ga (272), ga (282), ga (290), ga (310), ga (322), ga (326), ga (328), ga (330), ga (346), ga (349), ga (355), ga (371), ga (376), ga (377), ga (379), ga (382), ga (385), ga (388), ga (396), ga (411), ga (417), ga (424), ga (427), ga (429), Editing mismatches: 26, all mismatches: 26, alignment length: 200, cluster length: 173, total number of Gs: 54 Locations in RNA: 257 263 272 282 290 310 322 326 328 330 346 349 355 371 376 377 379 382 385 388 396 411 417 424 427 429 Locations in genome: 79804487 79804481 79804472 79804462 79804454 79804434 79804422 79804418 79804416 79804414 79804398 79804395 79804389 79804373 79804368 79804367 79804365 79804362 79804359 79804356 79804348 79804333 79804327 79804320 79804317 79804315 Upstream nucleotide (in genome): c c c c c a c c t c a a t c c g a a t c a t c t a g Upstream nucleotide summary: a: 7, c: 12, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): a a a c a g g t c c g g a a g a g c a g g c c g g c Downstream nucleotide summary: a: 8, c: 7, g: 10, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 6, at: 0, ca: 5, cc: 3, cg: 3, ct: 1, ga: 1, gc: 1, gg: 0, gt: 0, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr17:79804308-79804507 (-) agatcctgttcatcttcatcgacagcgaccacaccgacaaccagcgcatcctcgagttctttggcctgaagaaggaagagtgcccggccgtgcgcctcatcaccctggaggaggagatgaccaagtacaagcccgaatcggaggagctgacggcagagaggatcacagagttctgccaccgcttcctggagggcaaaatc >AW238973:237-436 (+) agatcctgttcatcttcatcaacagcaaccacaccaacaaccagcacatcctcaagttctttggcctgaagaaagaagagtgcccagccatacacctcatcaccctggaagaagagataaccaantacaagcccaaatcaaaagaactaacagcagagaagatcacagagttctaccaccacttcctagaagacaaaatc End editing Edited EST: AW238975, type: ga Aligns to: chr17:79477100-79477520 (-+) All mismatches: ga (146), ga (149), ga (165), ga (175), ga (177), ga (181), ga (188), ga (207), ga (209), ga (214), ga (218), ga (232), ga (239), ga (241), ga (245), ga (249), ga (251), ga (254), ga (255), ga (265), ga (268), ga (271), ga (291), ga (294), ga (297), ga (303), ga (304), gc (308), ga (315), ga (317), ga (318), ga (319), ga (322), ga (329), ga (334), ga (339), ga (340), gc (343), ga (345), ga (346), ga (350), ga (358), ga (362), ga (368), ga (388), ga (392), ga (401), ga (405), Editing mismatches: 46, all mismatches: 48, alignment length: 421, cluster length: 260, total number of Gs: 72 Locations in RNA: 146 149 165 175 177 181 188 207 209 214 218 232 239 241 245 249 251 254 255 265 268 271 291 294 297 303 304 315 317 318 319 322 329 334 339 340 345 346 350 358 362 368 388 392 401 405 Locations in genome: 79477375 79477372 79477356 79477346 79477344 79477340 79477333 79477314 79477312 79477307 79477303 79477289 79477282 79477280 79477276 79477272 79477270 79477267 79477266 79477256 79477253 79477250 79477230 79477227 79477224 79477218 79477217 79477206 79477204 79477203 79477202 79477199 79477192 79477187 79477182 79477181 79477176 79477175 79477171 79477163 79477159 79477153 79477134 79477130 79477120 79477116 Upstream nucleotide (in genome): a a a c t a a a a g a t c g t a g t g a c a a t t t g c t g g t t t t g c g t c t t t a t c Upstream nucleotide summary: a: 13, c: 7, g: 9, t: 17, other: 0 Downstream nucleotide (in genome): c c g t t g t a g c a t g t t g t g a c t g c a t g c t g g c t c a g a g t c c t t t g t c Downstream nucleotide summary: a: 6, c: 11, g: 13, t: 16, other: 0 Dinucleotide summary: aa: 2, ac: 4, ag: 6, at: 1, ca: 0, cc: 2, cg: 2, ct: 3, ga: 2, gc: 3, gg: 1, gt: 3, ta: 2, tc: 2, tg: 4, tt: 9, other: 0 >chr17:79477100-79477520 (-) ttaactgttccccttggtatttgtttaataccctgtacatatctttgagttcaacctttagtacgtgtggcttggtcacttcgtggctaaggtaagaacgtgcttgtggaagacaagtctgtggcttggtgagtctgtgtggccagcagcctctgatctgtgcagggtattaacgtgtcagggctgagtgttctgggatttctctagaggctggcaagaaccagttgttttgtcttgcgggtctgtcagggttggaaagtccaagccgtaggacccagtttcctttcttagctgatgtctttggccagaacaccgtgggctgttacttgctttgagttggaagcggtttgcatttacgcctgtaaatgtattcattcttaatttat-gtaaggttttttttgtacgcaattctcgattcttt >AW238975:1-421 (+) ttaactgttccccttggtatttgtttaataccctgtacatatctttgagttcaacctttagtacgtgtggcttggtcacttcgtggctaaggtaagaacgtgcttgtggaagacaagtctgtggcttggtgagtctgtgtggccaacaacctctgatctgtgcaaggtattaacatatcaaggctgaatgttctgggatttctctaaaagctgacaaaaaccanttgttttatcttgcagatctatcaagattaaaaagtccaaaccataagacccantttcctttcttaactaatatctttaaccacaacaccataaactattacttactttaagttaaaaccaatttacatttacacctataaatatattcattcttaatttattataaa-ttttttttatacacaattctcgattcttt End editing Edited EST: AW238998, type: ga Aligns to: chr17:79478927-79479171 (-+) All mismatches: ga (160), ga (161), ga (164), ga (178), ga (187), ga (203), ga (206), ga (208), gt (220), ga (222), ga (224), ga (225), ga (232), ga (238), ga (251), gt (253), ga (257), ga (273), ga (275), ga (278), ga (283), ga (284), ga (294), ga (295), ga (314), ga (316), ga (319), ga (321), ga (323), ga (325), ga (326), ga (331), ga (332), ga (334), ga (335), ga (337), ga (346), ga (349), ga (352), ga (356), ga (358), ga (367), ga (376), ga (386), ga (394), ga (401), Editing mismatches: 44, all mismatches: 46, alignment length: 245, cluster length: 242, total number of Gs: 76 Locations in RNA: 160 161 164 178 187 203 206 208 222 224 225 232 238 251 257 273 275 278 283 284 294 295 314 316 319 321 323 325 326 331 332 334 335 337 346 349 352 356 358 367 376 386 394 401 Locations in genome: 79479169 79479168 79479165 79479151 79479142 79479126 79479123 79479121 79479107 79479105 79479104 79479097 79479091 79479078 79479072 79479056 79479054 79479051 79479046 79479045 79479035 79479034 79479015 79479013 79479010 79479008 79479006 79479004 79479003 79478998 79478997 79478995 79478994 79478992 79478983 79478980 79478977 79478973 79478971 79478962 79478953 79478943 79478935 79478928 Upstream nucleotide (in genome): a g c t a c c a c t g t t t t t g c t g t g c a t c c t g c g a g a t t t c a t a a t g Upstream nucleotide summary: a: 9, c: 10, g: 9, t: 16, other: 0 Downstream nucleotide (in genome): g g t g g a a g t g c a a a g g a a g a g c a c c c t g c g a g a c c c a a g a g a a t Downstream nucleotide summary: a: 16, c: 9, g: 15, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 6, at: 0, ca: 5, cc: 1, cg: 1, ct: 3, ga: 4, gc: 3, gg: 1, gt: 1, ta: 6, tc: 3, tg: 7, tt: 0, other: 0 >chr17:79478927-79479171 (-) cagggcgtcatggtgggcatgggccagaaggactcctacgtgggcgacgaggcccagagcaagcgtggcatcctgaccctgaagtaccccattgagcatggcatcgtcaccaactgggacgacatggagaagatctggcaccacaccttctacaacgagctgcgcgtggccccggaggagcacccagtgctgctgaccgaggcccccctgaaccccaaggccaacagagagaagatgactcaggt >AW238998:158-402 (+) caaagcatcatggtgggcataggccagaaagactcctacgtgggcaacaaagcccagancaatcataacatcctaaccctaaagtaccccattaatcatagcatcgtcaccaactagaacaacataaagaagatctaacaccacaccttctacaacaaactacacataaccccaaaaaaacacccantactactaaccaaagcccccctaaaccccaaagccaacagaaagaagataactcagat End editing Edited EST: AW302398, type: ga Aligns to: chr17:19286390-19286815 (-+) All mismatches: ga (88), ga (116), ga (176), ga (195), ga (211), ga (261), ga (275), ga (286), ga (291), ga (295), ga (334), ga (340), ga (353), ga (354), ga (365), ga (379), gt (391), ga (394), ga (398), ga (408), ga (410), ga (414), ga (420), ga (424), Editing mismatches: 23, all mismatches: 24, alignment length: 426, cluster length: 337, total number of Gs: 115 Locations in RNA: 88 116 176 195 211 261 275 286 291 295 334 340 353 354 365 379 394 398 408 410 414 420 424 Locations in genome: 19286728 19286700 19286640 19286621 19286605 19286555 19286541 19286530 19286525 19286521 19286482 19286476 19286463 19286462 19286451 19286437 19286422 19286418 19286408 19286406 19286402 19286396 19286392 Upstream nucleotide (in genome): c a a a a a a a a a c a c g t a a a a a t t t Upstream nucleotide summary: a: 15, c: 3, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): a g c g a g g g g g c g g c c c g g a g a c g Downstream nucleotide summary: a: 4, c: 6, g: 13, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 11, at: 0, ca: 1, cc: 1, cg: 1, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr17:19286390-19286815 (-) gatggcaaaaagacagtgtaataataacataataataataaaaatataatactgaaaaggattgttcagggggagttggggtctcccgatcctgccatggctcggtggtggctcaggtggctgcttaaggctgaaaggtgggtctgagatgaacctgcagaataatccaagccgagcctcacctgctgggtccagggctaaagcctttgagaatgctcccatggatcctggaactaggtctactgtggcagcaaggcacaggctgggggcctcaggggtcctggaggtcaggcaggtcagccagcagcattggggagtccatctggatctcacgctgcagggactcaatatcggcagggttcatgccatggccttcgagccagtcagcaagcagggaggctgagagagaggctgaatctgcctggc >AW302398:1-426 (+) gatggcaaaaagacagtgtaataataacataataataataaaaatataatactgaaaaggattgttcagggggagttggggtctcccaatcctgccatggctcggtggtggctcaagtggctgcttaaggctgaaaggtgggtctgagatgaacctgcagaataatccaagccgaacctcacctgctgggtccaaggctaaagcctttgaaaatgctcccatggatcctggaactaggtctactgtggcancaaggcacaagctgggggcctcaagggtcctggaagtcaagcaagtcagccagcagcattggggagtccatctggatctcacactgcaaggactcaatatcaacagggttcataccatggccttcgaaccagtcagcaatcaaggaagctgagagaaaagctaaatctacctagc End editing Edited EST: AW827274, type: ga Aligns to: chr17:26694735-26695081 (-+) All mismatches: ga (146), ga (175), ga (222), ga (247), ga (267), ga (269), ct (273), ga (280), ga (296), ga (298), ga (301), ga (310), ga (326), ga (329), ga (337), ga (338), ga (340), ga (341), ga (345), ga (346), ga (350), ga (352), ga (356), ga (363), ga (365), ga (378), ga (380), ga (395), ga (398), ga (399), Editing mismatches: 29, all mismatches: 30, alignment length: 347, cluster length: 254, total number of Gs: 66 Locations in RNA: 146 175 222 247 267 269 280 296 298 301 310 326 329 337 338 340 341 345 346 350 352 356 363 365 378 380 395 398 399 Locations in genome: 26694988 26694959 26694912 26694887 26694867 26694865 26694854 26694838 26694836 26694833 26694824 26694808 26694805 26694798 26694797 26694794 26694793 26694789 26694788 26694784 26694782 26694778 26694771 26694769 26694756 26694754 26694739 26694736 26694735 Upstream nucleotide (in genome): a a c a c c t t a a t t t a g t g t g t t t t t a t t a g Upstream nucleotide summary: a: 8, c: 3, g: 4, t: 14, other: 0 Downstream nucleotide (in genome): g a a a c c t a g a g a a g a g a g c t c c t a t t g g n Downstream nucleotide summary: a: 10, c: 5, g: 8, t: 5, other: 1 Dinucleotide summary: aa: 3, ac: 0, ag: 4, at: 1, ca: 1, cc: 2, cg: 0, ct: 0, ga: 2, gc: 1, gg: 0, gt: 0, ta: 4, tc: 2, tg: 4, tt: 4, other: 1 >chr17:26694735-26695081 (-) gctggtaccagacagccccagttcattagccgggactggcacggtgtgccagggcaagtggacgcagccatggctggccgcatctacatctcaggcatggcaccccgcccctccttggccaagaaacaaaggtttaggcatcgcaaccgcaaaggctaccgttcacaacgaggccacagccgtggccgcaaccagaactcccgccggccatcccgcgccacgtggctgtccttgttctccagtgaggagagcaacttgggagccaacaactatgatgac-tacaggatggactggcttgtgcctgccacctgtgaacccatccagagtgtcttcttcttctctggagg >AW827274:53-399 (+) gctggtaccagacagccccagttcattagccgggactggcacggtgtgccagggcaagtggacgcagccatggctggccgcatctacatctcaagcatggcaccccgcccctccttggccaaaaaacaaaggtttangcatcgcaaccgcaaaggctaccgttcacaacaaggccacagccgtggccgcaaccaaaactcccgccggccatcccacaccatgtggctatccttgttctccagtaaagaaagcaacttaggagccaacaactataataacgtacaaa-taaactaacttatacctaccacctataaacccatccagaatatcttcttcttctctagaaa End editing Edited EST: AA323487, type: ag Aligns to: chr17:27221421-27221628 (-+) All mismatches: ag (140), ag (172), ag (179), ag (196), ag (204), ag (226), ag (251), ag (259), ag (262), ag (288), ag (299), ag (301), cg (309), Editing mismatches: 12, all mismatches: 13, alignment length: 208, cluster length: 162, total number of As: 38 Locations in RNA: 140 172 179 196 204 226 251 259 262 288 299 301 Locations in genome: 27221598 27221566 27221559 27221542 27221534 27221512 27221487 27221479 27221476 27221450 27221439 27221437 Upstream nucleotide (in genome): t c a c c c t t t c c a Upstream nucleotide summary: a: 2, c: 6, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t g g g a c t g g g a c Downstream nucleotide summary: a: 2, c: 2, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 2, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 2, tt: 2, other: 0 >chr17:27221421-27221628 (-) gctctgttgcccaggctggagtgcagtggtatgacttcagctcactgcagcctccacctaccaggttcaagccattctcatgtctcagcctcccaagtagctgggattacaggtgcacgccacagtgcccagctaatttttatatttttagtagagacagggtttcaccatgttggccaggctgttctcaaactcctggcctcaagtg >AA323487:110-317 (+) gctctgttgcccaggctggagtgcagtggtgtgacttcagctcactgcagcctccacctaccgggttcaggccattctcatgtctcggcctcccgagtagctgggattacaggtgcgcgccacagtgcccagctaatttttgtatttttggtggagacagggtttcaccatgttggccgggctgttctcgagctcctgggctcaagtg End editing Edited EST: AA364783, type: ag Aligns to: chr17:53577509-53577795 (-+) All mismatches: ag (15), ag (21), ag (38), ag (49), ag (55), ag (65), ag (73), ag (84), ag (97), ag (111), ag (146), ag (154), ag (186), ag (189), ag (194), ag (195), ag (213), ag (218), ag (234), ag (248), Editing mismatches: 20, all mismatches: 20, alignment length: 287, cluster length: 234, total number of As: 70 Locations in RNA: 15 21 38 49 55 65 73 84 97 111 146 154 186 189 194 195 213 218 234 248 Locations in genome: 53577781 53577775 53577758 53577747 53577741 53577731 53577723 53577712 53577699 53577685 53577650 53577642 53577610 53577607 53577602 53577601 53577583 53577578 53577562 53577548 Upstream nucleotide (in genome): c c a t a a c a c t t t c c t a g a c c Upstream nucleotide summary: a: 6, c: 8, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g g t t g g c g g g g t g g a g g g g c Downstream nucleotide summary: a: 1, c: 2, g: 14, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 5, at: 1, ca: 0, cc: 2, cg: 6, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 2, tt: 2, other: 0 >chr17:53577509-53577795 (-) gaattttacagaccaggagcagtgactcatgcctgtaatctcagcactatgggaagctgaggcaagaggatcacttgagaccaagagtttgagaccagcctgggcaacatagcaagagcccgtctctataagaagtgaaagaattagctgagtatggtggctggcacctgtagtcccagctactcagcagggtaaggcagaaagatcgcttgagccaaggaatttgaggctgcagtgagccatgatcacattactctctaccctccagcctgggtaacagagcacgg >AA364783:1-287 (+) gaattttacagaccgggagcggtgactcatgcctgtagtctcagcactgtgggaggctgaggcaggaggatcgcttgagaccaggagtttgagaccggcctgggcaacatggcaagagcccgtntctataagaagtgaaaganttggctgagtgtggtggctggcacctgtagtcccagctactcggcggggtggggcagaaagatcgcttnggccagggaatttgaggctgcggtgagccatgatcgcattactctctaccctncagcctgggtaacagagcacgg End editing Edited EST: AL602586, type: ag Aligns to: chr17:79528089-79528526 (-+) All mismatches: ag (258), ag (263), ag (316), ag (325), ag (339), ag (363), ag (366), ag (369), ag (372), ag (373), ag (405), ag (406), ag (415), ag (434), ag (437), Editing mismatches: 15, all mismatches: 15, alignment length: 437, cluster length: 181, total number of As: 52 Locations in RNA: 258 263 316 325 339 363 366 369 372 373 405 406 415 434 437 Locations in genome: 79528269 79528264 79528211 79528202 79528188 79528164 79528161 79528158 79528155 79528154 79528122 79528121 79528112 79528092 79528089 Upstream nucleotide (in genome): t c c g a t a t a a t a t g a Upstream nucleotide summary: a: 6, c: 2, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): g c g g c a a a a a a t c g n Downstream nucleotide summary: a: 6, c: 3, g: 4, t: 1, other: 1 Dinucleotide summary: aa: 3, ac: 1, ag: 0, at: 1, ca: 0, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 3, tc: 1, tg: 1, tt: 0, other: 1 >chr17:79528089-79528526 (-) gaaaaacactggcataaaaataggtaaattgataaataaatttatctaaacaaaacacttgtgctcatcacagggcactgttagaaacatgaaaaggcaccaatgggggacgcagtattagcagtacatacacacaacatgacttctatctgaaacttaaaaataactctgcctgttgttaatcaaacagaaagcagaagaagaagctgggcggagggtgaaacgtttcacaaaaggaaatgcaggtcgggcatggtagctcacgcctgtaatcccagcactttgggaggccgaggcggtggatcatttgaggtcaggagttcgagacagccaggccaacatggtgaaaacccatctctactaaaaataaaaaaaattagccaggtgtggtggcacgtgcctgtaatcctagctacttgggaggctgaggtaggagaa >AL602586:1-437 (+) gaaaaacactggcataaaaataggtaaattgataaataaatttatctaaacaaaacacttgtgctcatcacagggcactgttagaaacatgaaaaggcaccaatgggggacgcagtattagcagtacatacacacaacatgacttctatctgaaacttaaaaataactctgcctgttgttaatcaaacagaaagcagaagaagaagctgggcggagggtgaaacgtttcacaaaaggaaatgcaggtcgggcatggtggctcgcgcctgtaatcccagcactttgggaggccgaggcggtggatcatttgaggtcgggagttcgggacagccaggccagcatggtgaaaacccatctctactgaagatgaaggaaattagccaggtgtggtggcacgtgcctgtggtcctagctg-ttgggaggctgaggnangggag End editing Edited EST: DW414013, type: ag Aligns to: chr18:21943649-21943950 (-+) All mismatches: ag (16), ga (57), ag (75), ag (91), ag (92), ag (113), ag (121), ag (127), ag (191), ag (222), ag (228), ag (229), ag (239), ag (258), ag (263), Editing mismatches: 14, all mismatches: 15, alignment length: 302, cluster length: 248, total number of As: 64 Locations in RNA: 16 75 91 92 113 121 127 191 222 228 229 239 258 263 Locations in genome: 21943950 21943891 21943875 21943874 21943853 21943845 21943839 21943775 21943744 21943738 21943737 21943727 21943708 21943703 Upstream nucleotide (in genome): n c t a c a c a t c a g c g Upstream nucleotide summary: a: 4, c: 5, g: 2, t: 2, other: 1 Downstream nucleotide (in genome): t g a t a g c a g a c g c g Downstream nucleotide summary: a: 4, c: 3, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 1, ca: 2, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 1 >chr18:21943649-21943950 (-) atctcggtgggcccattgtaatcacaggtgtccttagaagtgtaagagaggctggacacagtggctcacgcctgtaatctcagcactttgggaggccaaggtggaaggatcacttgagcacgggagtttgagaccagcctgggcaacatagggagaatcccatctctaaaaaaaaaaaattgcctggtgtggtggtgtgcatctgtagtcccaactgctcgggaggctgaggttggaggatcacttgagccggggaggtcgaggctgaagtgagccatgatttcaccactgcactctagcct >DW414013:16-317 (+) gtctcggtgggcccattgtaatcacaggtgtccttagaagtataagagaggctggacacggtggctcacgcctgtggtctcagcactttgggaggccgaggtggagggatcgcttgagcacgggagtttgagaccagcctgggcaacatagggagaatcccatctctaaaaaaaagaaattgcctggtgtggtggtgtgcatctgtggtcccggctgctcggggggctgaggttggaggatcgcttgggccggggaggtcgaggctgaagtgagccatgatttcaccactgcactctagcct End editing Edited EST: DW415685, type: ag Aligns to: chr18:3622119-3622418 (-+) All mismatches: ag (15), ag (16), ag (17), ag (33), ag (63), ag (78), ag (81), ag (90), ag (126), ag (158), ag (160), ag (163), ag (230), ag (231), Editing mismatches: 14, all mismatches: 14, alignment length: 299, cluster length: 218, total number of As: 65 Locations in RNA: 15 16 17 33 63 78 81 90 126 158 160 163 230 231 Locations in genome: 3622417 3622416 3622415 3622398 3622368 3622353 3622350 3622341 3622305 3622273 3622271 3622268 3622201 3622200 Upstream nucleotide (in genome): g a a g c a c c c a a t g a Upstream nucleotide summary: a: 6, c: 4, g: 3, t: 1, other: 0 Downstream nucleotide (in genome): a a t g c g g c g a t g a c Downstream nucleotide summary: a: 4, c: 3, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 2, ca: 0, cc: 2, cg: 2, ct: 0, ga: 2, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr18:3622119-3622418 (-) gaaataatcagcttaggacgagtgcagtggctcatgcctgtaatcccagcactttgggagaatgaagcaggcagatcacgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccgtctctactaaaaaatacaaaaaattagccgggcgtgttggtgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcatgaacctgggaggcggagctggcagtgagccaagatcacgtcactgcactctagcctgggcgacagagcgagactccatatcaaa >DW415685:14-312 (+) gggg-aatcagcttaggacgggtgcagtggctcatgcctgtaatcccagcgctttgggagaatgaggcgggcagatcgcgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaaatacaaagagttggccgggcgtgttggtgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcatgggcctgggaggcggagctggcagtgagccaagatcacgtcactgcactctagcctgggcgacagagcgagactccatatcaaa End editing Edited EST: DW465701, type: ag Aligns to: chr18:11855562-11855902 (-+) All mismatches: ag (16), ag (29), ag (30), ag (33), ag (34), ag (47), ag (55), ag (56), ag (59), ag (69), ag (95), ag (96), ag (109), ag (138), ag (157), ag (158), ag (165), ag (168), ag (250), Editing mismatches: 19, all mismatches: 19, alignment length: 341, cluster length: 235, total number of As: 48 Locations in RNA: 16 29 30 33 34 47 55 56 59 69 95 96 109 138 157 158 165 168 250 Locations in genome: 11855902 11855889 11855888 11855885 11855884 11855871 11855863 11855862 11855859 11855849 11855823 11855822 11855809 11855780 11855761 11855760 11855753 11855750 11855668 Upstream nucleotide (in genome): n t a c a c c a t t t a t c c a g g a Upstream nucleotide summary: a: 6, c: 5, g: 2, t: 5, other: 1 Downstream nucleotide (in genome): c a g a t g a g g c a t g g a c t t g Downstream nucleotide summary: a: 5, c: 3, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 3, at: 2, ca: 3, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 2, ta: 2, tc: 1, tg: 2, tt: 0, other: 1 >chr18:11855562-11855902 (-) acctcccgggtttaagcaattctcctgcctcagcctcccaagtagctgggattacaggcatgtgccaccatgcccggctaattttgtatttttagtagagacggggtttcttcatgttggtcaggctggtctcgaacttccaacctcagatgatctgcctgcctcggcctcccaaagtgttgggattacaggcgtgagccactgcacctggcccagcagtcttttccaaatcaaagacagcagggcgggcacacagtgtccaaacctcatggtctgcctgtatttaaaaggcatctagatacattggcattccttcagcaagaaacagctttagtaagaaa >DW465701:16-356 (+) gcctcccgggtttgggcggttctcctgcctcggcctcccgggtggctgggattgcaggcatgtgccaccatgcccggctggttttgtatttttggtagagacggggtttcttcatgttggtcgggctggtctcgaacttccggcctcaggtggtctgcctgcctcggcctcccaaagtgttgggattacaggcgtgagccactgcacctggcccagcagtcttttccaaatcaaggacagcagggcgggcacacagtgtccaaacctcatggtctgcctgtatttaaaaggcatctagatacattggcattccttcagcaagaaacagctttagtaagaaa End editing Edited EST: H56191, type: ag Aligns to: chr19:23523858-23524165 (-+) All mismatches: ag (20), ag (63), ag (73), ag (86), ag (118), ag (140), ag (143), ag (144), ag (145), ag (153), ag (175), ag (181), ag (202), ag (228), ag (237), ag (241), ag (273), Editing mismatches: 17, all mismatches: 17, alignment length: 309, cluster length: 254, total number of As: 65 Locations in RNA: 20 63 73 86 118 140 143 144 145 153 175 181 202 228 237 241 273 Locations in genome: 23524146 23524103 23524093 23524080 23524048 23524026 23524023 23524022 23524021 23524013 23523991 23523985 23523964 23523938 23523929 23523925 23523893 Upstream nucleotide (in genome): c t c c g t a a a c c c c c c g g Upstream nucleotide summary: a: 3, c: 9, g: 3, t: 2, other: 0 Downstream nucleotide (in genome): g g g g a c a a g g g a g g g g c Downstream nucleotide summary: a: 4, c: 2, g: 11, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 0, ca: 1, cc: 0, cg: 8, ct: 0, ga: 1, gc: 1, gg: 1, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr19:23523858-23524165 (-) tcaaatgatagttctggccaggcgtggtagctcacgcctgtaatcccaacactttgggaggtagaggcgggcaggtcatgaggtcagaagtttgagaccagcctgagcgatatggtgaaaccccgtctctactaaaaatacaaaagttagccaggcgtggtggcacttgcctgcagccccaactcctcaggaggctgacacagaagaattgcttgaacctgggagtcagtggttgcagtgagctgagatcgtaccactgcactccagcctgga-caactaagactccgtctcaaaaaaaaaaaaaaaaa >H56191:1-309 (+) tcaaatgatagttctggccgggcgtggtagctcacgcctgtaatcccaacactttgggaggtggaggcgggcgggtcatgaggtcggaagtttgagaccagcctgagcgatatggtggaaccccgtctctactaaaaatgcaggggttagccgggcgtggtggcacttgcctgcggccccgactcctcaggaggctgacacggaagaattgcttgaacctgggagtcggtggttgcggtgggctgagatcgtaccactgcactccagcctgggacaactaagactccgtctcaaaaaaaaaaaaaaaaa End editing Edited EST: DA239994, type: ag Aligns to: chr19:47237885-47238477 (-+) All mismatches: ag (2), ag (23), ag (27), ag (37), ag (63), ag (72), ag (81), ag (87), ag (95), ag (98), ag (108), ag (122), ag (141), ag (159), ag (160), ag (185), tc (203), ag (216), ag (253), ag (268), ag (271), ag (284), ag (315), ag (328), ag (331), ag (352), ag (359), ag (360), ag (382), ag (392), tc (411), ag (418), ag (424), ag (445), ag (459), ag (460), ag (521), ga (583), Editing mismatches: 35, all mismatches: 38, alignment length: 594, cluster length: 520, total number of As: 124 Locations in RNA: 2 23 27 37 63 72 81 87 95 98 108 122 141 159 160 185 216 253 268 271 284 315 328 331 352 359 360 382 392 418 424 445 459 460 521 Locations in genome: 47238476 47238455 47238451 47238441 47238415 47238406 47238397 47238391 47238383 47238380 47238370 47238356 47238337 47238319 47238318 47238293 47238262 47238225 47238210 47238207 47238194 47238163 47238150 47238147 47238126 47238119 47238118 47238096 47238086 47238060 47238054 47238033 47238019 47238018 47237957 Upstream nucleotide (in genome): g c t t t t t c t c a c c a a c a a c t t c c g a c a t t t c c g a c Upstream nucleotide summary: a: 8, c: 13, g: 3, t: 11, other: 0 Downstream nucleotide (in genome): t a g c a t a g c t g c c a c c a c g g a g g g c a a c g g g g a c g Downstream nucleotide summary: a: 9, c: 10, g: 13, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 4, ag: 1, at: 0, ca: 2, cc: 3, cg: 7, ct: 1, ga: 1, gc: 0, gg: 1, gt: 1, ta: 3, tc: 3, tg: 4, tt: 1, other: 0 >chr19:47237885-47238477 (-) gattctcgtgcttcagcctcccaagtagctgggattacaggtgtgtgccaccacacctggctaatttttgtatttttagtaaagacagcgttttaccatgttggccaagctggtcttgaacacccgagctcaagtgatccacctgccttggcctcccaaactgctgggattacaggtgtgagccaccgcgcccagcccagcttatatattttataaaagctgggatttgttttcactgttaaagagttgcaaacatcggccgggtgcagtagctcatgcctgtaatcccagcactttgggaggccgaggcgggcagatcacaaggtcaggagatcgagaccatcctggctaacacggcaaaaccccgtctctactaaaaatacaaaaaattagccgggcttggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggagacggagcttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagagcaagagtctgtcttaacaacaacaaaaaagagttacgaacatctctccatattaattag-ttatgttgca >DA239994:1-594 (+) ggttctcgtgcttcagcctcccgagtggctgggattgcaggtgtgtgccaccacacctggctgatttttgtgtttttagtgaagacggcgttttgccgtgttggccaggctggtcttgaacgcccgagctcaagtgatccgcctgccttggcctcccaggctgctgggattacaggtgtgagccgccgcgcccagcccagctcatatattttatagaagctgggatttgttttcactgttaaagagttgcaagcatcggccgggtgcggtggctcatgcctgtgatcccagcactttgggaggccgaggcgggcggatcacaaggtcgggggatcgagaccatcctggctagcacggcggaaccccgtctctactaaaaatgcaaaaaattggccgggcttggtggcgggcgcctgtggtcccggctactcgggaggctgaggcgggagaatggcgtgggcccgggagacggagcttgcagtgagccgagatcgtgccactgcactccagcctgggcgacggagcaagagtctgtcttaacaacaacaaaaaagagttacgaacatctctccatattaattaagttatgttgca End editing Edited EST: DA098819, type: ag Aligns to: chr19:53120521-53121009 (-+) All mismatches: ag (35), ag (37), ag (39), ag (40), ag (45), ag (57), ag (69), ag (73), ag (75), ag (78), ag (88), ag (100), ag (113), ag (114), ag (117), ag (118), ag (131), ag (143), ag (161), ag (169), ag (175), ag (179), ag (188), ag (194), ag (197), ag (203), ag (211), ag (214), ag (223), ag (235), ag (236), ag (257), ag (276), ag (288), ag (294), Editing mismatches: 35, all mismatches: 35, alignment length: 489, cluster length: 260, total number of As: 54 Locations in RNA: 35 37 39 40 45 57 69 73 75 78 88 100 113 114 117 118 131 143 161 169 175 179 188 194 197 203 211 214 223 235 236 257 276 288 294 Locations in genome: 53120980 53120978 53120976 53120975 53120970 53120958 53120946 53120942 53120940 53120937 53120927 53120915 53120902 53120901 53120898 53120897 53120884 53120872 53120854 53120846 53120840 53120836 53120827 53120821 53120818 53120812 53120804 53120801 53120792 53120780 53120779 53120758 53120739 53120727 53120721 Upstream nucleotide (in genome): g g c a c c c g c g c c c a c a c t c c c t t t t c c c c g a c a t c Upstream nucleotide summary: a: 5, c: 19, g: 5, t: 6, other: 0 Downstream nucleotide (in genome): g c a t c g g c c t c c a g a t g g t t g a t g g g c t g a c c g c t Downstream nucleotide summary: a: 5, c: 10, g: 12, t: 8, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 2, ca: 3, cc: 6, cg: 6, ct: 4, ga: 1, gc: 2, gg: 1, gt: 1, ta: 1, tc: 1, tg: 3, tt: 1, other: 0 >chr19:53120521-53121009 (-) ttttttttttttttttttttttttttttgagacaatctcactctgttgcccaggctggagtgcagtgacacgatctcggttcactgtaacctccacctctggggttcaagcaattctcctgcctcagcctcccaagtagctgggactgcagtcacatgccaccatgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctgtgtttgaactcctgacttcaggtgatccacctgcctgggcctcccaaagtgttgggattacaggcatgagccactgctcccggcctactgtcacttcttaacatattaatctttgtatttctgaccacctcaatatccacagtactcagtccccatgctactctcaccatgtaaggaaagacacttgcttatctgtaggacggctttctcagaacacagcctaaaccgatgtctgctctgtacgatggtggacataccgctgtcta >DA098819:6-494 (+) ttttttttttttttttttttttttttttggggcggtctcgctctgttgcccgggctggagtgcggtggcgcggtctcggttcgctgtaacctccgcctctggggttcgggcggttctcctgcctcggcctcccaagtggctgggactgcagtcacgtgccaccgtgcccggctgatttttgtgtttttggtggagacggggtttcgccgtgttggccgggctgtgtttgggctcctgacttcaggtgatccgcctgcctgggcctcccaaggtgttgggattgcaggcgtgagccactgctcccggcctactgtcacttcttaacatattaatctttgtatttctgaccacctcaatatccacagtactcagtccccatgctactctcaccatgtaaggaaagacacttgcttatctgtaggacggctttctcagaacacagcctaaaccgatgtctgctctgtacgatggtggacataccgctgtcta End editing Edited EST: DA154777, type: ag Aligns to: chr19:23522398-23522939 (-+) All mismatches: ag (237), ag (250), ag (255), ag (256), ag (277), ag (309), ag (337), ag (363), ag (369), ag (380), ag (394), ag (441), ag (454), ag (456), tg (514), Editing mismatches: 14, all mismatches: 15, alignment length: 541, cluster length: 220, total number of As: 47 Locations in RNA: 237 250 255 256 277 309 337 363 369 380 394 441 454 456 Locations in genome: 23522702 23522689 23522684 23522683 23522662 23522630 23522602 23522576 23522570 23522559 23522545 23522498 23522485 23522483 Upstream nucleotide (in genome): c c c a a t t t c c t a t c Upstream nucleotide summary: a: 3, c: 6, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): c c a c c g g g g t g a c g Downstream nucleotide summary: a: 2, c: 5, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 0, ca: 1, cc: 2, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 4, tt: 0, other: 0 >chr19:23522398-23522939 (-) ctagttctttgaaatgtgatgtcaggtccttaatatgtaagctttctatttttttgatgcaggcctttaggctattaacttcccttttagtactacatttgatgtatctcacaggttttattatattgtgtttctatttccatcttttttcccacaaatttttaattttcatcttaattttttttttttttttttgagataggttttacactgtcacccaggctggagtgtagtggcacagtgttggctcactgcaacttctgccttccaggctcaaacgatcgttttatattagcctcccgagtagctaggaccataggtgcacaccaccacacctagctattttttcatatttttttttgtagggacagggttttgccatgttgcccaggctagtgttaaacttcttacctcaggtggtccacctgtctcagcctcccaaagtgctgggattacaggtgggagccaccacccctggtcaaccatcataattacttcatttacatagtcactgttgaggagtatgttatttaaattctttg >DA154777:1-541 (+) ctagttctttgaaatgtgatgtcaggtccttaatatgtaagctttctatttttttgatgcaggcctttaggctattaacttcccttttagtactacatttgatgtatctcacaggttttattatattgtgtttctatttccatcttttttcccacaaatttttaattttcatcttaa-tttttttttttttttttgagataggttttacactgtcacccaggctggagtgtagtggcgcagtgttggctcgctgcggcttctgccttccaggctcaagcgatcgttttatattagcctcccgagtagctgggaccataggtgcacaccaccacacctggctattttttcatatttttttttgtggggacggggttttgccgtgttgcccaggctggtgttaaacttcttacctcaggtggtccacctgtctcagcctcccagagtgctgggattgcgggtgggagccaccacccctggtcaaccatcataattacttcatttacatagtcactggtgaggagtatgttatttaaattctttg End editing Edited EST: DA397820, type: ag Aligns to: chr19:10611106-10611689 (-+) All mismatches: ag (39), ag (43), ag (83), ca (94), ag (107), ag (131), ag (140), ag (141), ag (196), ag (206), ag (223), ag (238), ag (266), Editing mismatches: 12, all mismatches: 13, alignment length: 584, cluster length: 228, total number of As: 52 Locations in RNA: 39 43 83 107 131 140 141 196 206 223 238 266 Locations in genome: 10611651 10611647 10611607 10611583 10611559 10611550 10611549 10611494 10611484 10611467 10611452 10611424 Upstream nucleotide (in genome): c c c c a a a t t c a c Upstream nucleotide summary: a: 4, c: 6, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g t a g c a c g c g c a Downstream nucleotide summary: a: 3, c: 4, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 0, at: 0, ca: 2, cc: 0, cg: 3, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr19:10611106-10611689 (-) cttggtctgccagattttaaaaaactgcaccccgggtcaggcatggtggcttacgcctgtaatcccagcacttcgggatgccaaggcgggcggctcacttgaggtcaggagtttgagaccagcctggccaacatggcgaaacccagtctctgctaaaaatacaaaaactagccgggtgtggtggcggacgcctgtagtcccagctactcgggaggctgaggcaggaggatcgcttgaacccgggaggcggaggttgcagtgagccaagatcgagccattgcactccagcctgggtgacagagagactccatctgaaaaaaaaaaaaaaaaaagcaaacaaactgcacccgattctcacgttgtcacaatgctgttgtaattttcttcatgaagctgtttttccaggtcttgcttattttagtttatgattgctcctccctgcagttgtcagctctggcagggtaggatttttgtattttgctcactgctgtgtcttcagcacccagatcagtgcctggcatacagtaggtgcccagtaaatggtgaggcaaatgaaggaatgagctcaacatgctctagaaagg >DA397820:1-584 (+) cttggtctgccagattttaaaaaactgcaccccgggtcgggcgtggtggcttacgcctgtaatcccagcacttcgggatgccgaggcgggcggatcacttgaggtcgggagtttgagaccagcctggccagcatggcgaggcccagtctctgctaaaaatacaaaaactagccgggtgtggtggcggacgcctgtggtcccagctgctcgggaggctgaggcgggaggatcgcttgagcccgggaggcggaggttgcagtgagccgagatcgagccattgcactccagcctgggtgacagagagactccatctgaaaaaaaaaaaaaaaaaagcaaacaaactgcacccgattctcacgttgtcacaatgctgttgtaattttcttcatgaagctgtttttccaggtcttgcttattttagtttatgattgctcctccctgcagttgtcagctctggcagggtaggatttttgtattttgctcactgctgtgtcttcagcacccagatcagtgcctggcatacagtaggtgcccagtaaatggtgaggcaaatgaaggaatgagctcaacatgctctagaaagg End editing Edited EST: DB257718, type: ag Aligns to: chr19:21764826-21765406 (-+) All mismatches: tc (20), ag (85), ag (90), ag (100), ag (101), ag (132), ag (137), ag (149), ag (159), ag (200), ag (203), ag (229), ag (234), ag (240), ag (241), ag (242), ag (254), ag (263), ag (293), ag (299), ga (392), Editing mismatches: 19, all mismatches: 21, alignment length: 581, cluster length: 215, total number of As: 44 Locations in RNA: 85 90 100 101 132 137 149 159 200 203 229 234 240 241 242 254 263 293 299 Locations in genome: 21765322 21765317 21765307 21765306 21765275 21765270 21765258 21765248 21765207 21765204 21765178 21765173 21765167 21765166 21765165 21765153 21765144 21765114 21765108 Upstream nucleotide (in genome): a c c a t c t t t t c t c a a c c t c Upstream nucleotide summary: a: 4, c: 8, g: 0, t: 7, other: 0 Downstream nucleotide (in genome): t g a c c g g c g g g g a a c g c c t Downstream nucleotide summary: a: 3, c: 6, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 1, ca: 2, cc: 1, cg: 4, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 3, tg: 4, tt: 0, other: 0 >chr19:21764826-21765406 (-) attgtagtaaccaggtctttcttttttttgttttttttgcgatggagtcttgctctcttgcccaggttggagtgcagtggcccaatctcagctcactgcaacctccacctccaggttcaagcgatttttctacctcagtctcccgagtagctgggattacaggcacctgccaccatgcctggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggctagtctcaaactcctgacctcaggtgatccacctgccttggcctcccaagtgctgggattacaggcatgggccactgcgcccggacccaggtccttctttatagctgccagccaaggtgctgctctctgctcctagagactgttctcagttctgtctcagggacccctccaactcagtaactgaaaaccagcctcaagtcaaatctgtctcccactatgaacctctgatggccttttctagccaaagaagactctgctttcaaagggcttctgtgattaggttaggcccacccatctccctagcataaggtctgctgattactaactttaatgacatccacaaaatttc >DB257718:1-581 (+) attgtagtaaccaggtcttccttttttttgttttttttgcgatggagtcttgctctcttgcccaggttggagtgcagtggcccagtctcggctcactgcggcctccacctccaggttcaagcgatttttctgcctcggtctcccgagtggctgggattgcaggcacctgccaccatgcctggctaatttttgtatttttggtggagacggggtttcaccatgttggccgggctggtctcgggctcctgacctcgggtgatccgcctgccttggcctcccaagtgctgggattgcaggcgtgggccactgcgcccggacccaggtccttctttatagctgccagccaaggtgctgctctctgctcctagagactgttctcagttctgtctcaaggacccctccaactcagtaactgaaaaccagcctcaagtcaaatctgtctcccactatgaacctctgatggccttttctagccaaagaagactctgctttcaaagggcttctgtgattaggttaggcccacccatctccctagcataaggtctgctgattactaactttaatgacatccacaaaatttc End editing Edited EST: DB250284, type: ag Aligns to: chr19:47283179-47283440 (-+) All mismatches: ag (38), ag (57), ag (82), ag (86), ag (90), ag (103), ag (128), ag (133), ag (136), ag (137), ag (169), ag (182), ag (185), ag (193), ag (201), tc (240), Editing mismatches: 15, all mismatches: 16, alignment length: 264, cluster length: 162, total number of As: 50 Locations in RNA: 38 57 82 86 90 103 128 133 136 137 169 182 185 193 201 Locations in genome: 47283403 47283384 47283359 47283355 47283351 47283338 47283314 47283310 47283307 47283306 47283274 47283261 47283258 47283250 47283242 Upstream nucleotide (in genome): c t g c c c a c a a t t c t c Upstream nucleotide summary: a: 3, c: 7, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g t g g g g c g a a g g c t g Downstream nucleotide summary: a: 2, c: 2, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 0, ca: 0, cc: 1, cg: 6, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 2, tt: 2, other: 0 >chr19:47283179-47283440 (-) tttttttgttgttgttgtttaagaaactgggtggcccagtacggaggctcatgcctataatcccagcactttgggaggctgaggcaggcagatcacgaggtcaggagatcgagaccatcctggc-taacac-agaaaaaccctgtctctactaaaaatacaaaaaattagctgggcgtggtagcacgcgcctatagtcccagctacttgggaggctgaggcaggagaatcgcttgaacctgggaggcggagggtgcagtgagcc >DB250284:1-264 (+) tttttttgttgttgttgtttaagaaactgggtggcccggtacggaggctcatgcctgtaatcccagcactttgggaggctggggcgggcggatcacgaggtcgggagatcgagaccatcctggcctagcaccggaggaaccctgtctctactaaaaatacaaaaaattggctgggcgtggtggcgcgcgcctgtagtcccggctacttgggaggctgaggcaggagaatcgcttgaacccgggaggcggagggtgcantgagcc End editing Edited EST: DW410143, type: ag Aligns to: chr19:3540507-3540825 (-+) All mismatches: ag (41), ag (47), ag (48), ag (73), ag (77), ag (87), ag (100), ag (127), ag (130), ag (144), ag (221), ag (315), ag (316), ag (321), Editing mismatches: 14, all mismatches: 14, alignment length: 319, cluster length: 281, total number of As: 54 Locations in RNA: 41 47 48 73 77 87 100 127 130 144 221 315 316 321 Locations in genome: 3540801 3540795 3540794 3540769 3540765 3540755 3540742 3540715 3540712 3540698 3540621 3540527 3540526 3540521 Upstream nucleotide (in genome): g c a c t t c t t c t t a c Upstream nucleotide summary: a: 2, c: 5, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): g a g a g c c g g c c a t g Downstream nucleotide summary: a: 3, c: 4, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 2, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 3, tt: 0, other: 0 >chr19:3540507-3540825 (-) ggctcactgcaacctctgcctccgaggttcaagtgattctcctgcctcagcctcccaagtagctgggattacaggcatgagccaccattcccggctaattttgtatttttagtagagacggggtttcaccatgttggtcaggctggtctcgaactcctgacttcaggtgatccgcctgcctcggcctccgaaagtgctggaattacaggcgtgagccactgcgcctggctgcctggctgatttttaaattttttatagagatggggtctcacagctaggcgcggtgcctcacgcctgtaatcccagcactttgggaggc >DW410143:17-335 (+) ggctcactgcaacctctgcctccggggttcgggtgattctcctgcctcagcctcccgagtggctgggattgcaggcatgagccgccattcccggctaattttgtatttttggtggagacggggtttcgccatgttggtcaggctggtctcgaactcctgacttcaggtgatccgcctgcctcggcctccgaaagtgctggaattgcaggcgtgagccactgcgcctggctgcctggctgatttttaaattttttatagagatggggtctcacagctaggcgcggtgcctcacgcctgtggtcccggcactttgggaggc End editing Edited EST: DW413366, type: ag Aligns to: chr19:3540117-3540420 (-+) All mismatches: ag (17), ag (30), ag (43), ag (44), ag (49), ag (53), ag (60), ag (66), ag (70), ag (84), ag (85), ag (88), ag (105), ag (113), ag (121), ga (129), ag (146), ag (148), tc (150), tc (204), ag (207), ag (221), ag (224), ag (238), ag (241), ag (263), ag (277), ag (278), ag (307), ag (308), ag (313), Editing mismatches: 28, all mismatches: 31, alignment length: 304, cluster length: 297, total number of As: 86 Locations in RNA: 17 30 43 44 49 53 60 66 70 84 85 88 105 113 121 146 148 207 221 224 238 241 263 277 278 307 308 313 Locations in genome: 3540420 3540407 3540394 3540393 3540388 3540384 3540377 3540371 3540367 3540353 3540352 3540349 3540332 3540324 3540316 3540291 3540289 3540230 3540216 3540213 3540199 3540196 3540174 3540160 3540159 3540130 3540129 3540124 Upstream nucleotide (in genome): n t t a c t g g c g a c c c c a g t c a a a a c a c a t Upstream nucleotide summary: a: 9, c: 9, g: 4, t: 5, other: 1 Downstream nucleotide (in genome): g g a t g c g g g a c g g a c g g g g g g t g a g a c t Downstream nucleotide summary: a: 5, c: 4, g: 16, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 5, at: 2, ca: 3, cc: 1, cg: 5, ct: 0, ga: 1, gc: 0, gg: 3, gt: 0, ta: 1, tc: 1, tg: 2, tt: 1, other: 1 >chr19:3540117-3540420 (-) agctgggcatggtagcgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcgctcgaaccagggagttggaggttgcagtgagccaagattgcaccattgcgttccagtcttgcgacaagagtgagactccgtccaaaaaaaaaaacaaaaattagctgggcatgtggcacaaacctgtagtcctagctactcagaaggcttgagatggaagaatcctagaacctgggaggcagaagttgcagtgagccaagattgcgccactgcaccctagcctgggcaacagtatgagact >DW413366:17-320 (+) ggctgggcatggtggcgcatgcctgtggtcccggctgcttggggggctggggcgggagaatcgctcgggccggggagttggaggttgcggtgagccgagattgcgccattgcattccagtcttgcgacaggggcgagactccgtccaaaaaaaaaaacaaaaattagctgggcatgtggcacaaacccgtggtcctagctactcggagggcttgagatggaggagtcctagaacctgggaggcagaggttgcagtgagccgggattgcgccactgcaccctagcctgggcggcagtgtgagact End editing Edited EST: DW417002, type: ag Aligns to: chr19:16555540-16555831 (-+) All mismatches: ag (66), ag (68), ag (71), ag (136), ag (153), ag (161), ag (165), ag (171), ag (177), ag (181), ag (217), ag (234), ag (274), ag (279), tc (290), Editing mismatches: 14, all mismatches: 15, alignment length: 292, cluster length: 214, total number of As: 59 Locations in RNA: 66 68 71 136 153 161 165 171 177 181 217 234 274 279 Locations in genome: 16555781 16555779 16555776 16555711 16555694 16555686 16555682 16555676 16555670 16555666 16555630 16555613 16555573 16555568 Upstream nucleotide (in genome): c a c t c c c t c t c a c c Upstream nucleotide summary: a: 2, c: 9, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): a g g c t c c g g c g t g a Downstream nucleotide summary: a: 2, c: 4, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 2, cc: 2, cg: 4, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 1, tt: 0, other: 0 >chr19:16555540-16555831 (-) ggggctgggcgtggtggctcatgcctgtaatcccagcactttgggaggccaaagcaggcggatcacctgaggtcaggaccagcctggccaatatggtgaaacctcgcttctactgaaaatacagaaattaagtgggcatggtggcacgcacctgtagtcccagctactcgggaggctgaggtaggagaatggcttgaatccaggagtcagagattgcaatgagctgagattgcgccactgctctccagcttgggtgacagaacaagaccctgtctcaaaaaaaaaaaaaaaa >DW417002:16-307 (+) ggggctgggcgtggtggctcatgcctgtaatcccagcactttgggaggccgaggcgggcggatcacctgaggtcaggaccagcctggccaatatggtgaaacctcgcttctactgaaaatgcagaaattaagtgggcgtggtggcgcgcgcctgtggtcccggctgctcgggaggctgaggtaggagaatggcttgaatccgggagtcagagattgcagtgagctgagattgcgccactgctctccagcttgggtgacggaacgagaccctgtcccaaaaaaaaaaaaaaaa End editing Edited EST: DW417209, type: ag Aligns to: chr19:3540281-3540571 (-+) All mismatches: ag (61), ag (67), ag (92), ag (100), ag (105), ag (128), ag (129), ag (137), ag (138), ag (139), ag (154), ag (157), ag (164), ag (165), ag (168), ag (181), ag (194), ag (195), ag (204), ag (221), ag (235), ag (236), ag (260), ag (272), ga (280), ag (285), tc (301), ag (303), Editing mismatches: 26, all mismatches: 28, alignment length: 291, cluster length: 243, total number of As: 68 Locations in RNA: 61 67 92 100 105 128 129 137 138 139 154 157 164 165 168 181 194 195 204 221 235 236 260 272 285 303 Locations in genome: 3540527 3540521 3540496 3540488 3540483 3540460 3540459 3540451 3540450 3540449 3540434 3540431 3540424 3540423 3540420 3540407 3540394 3540393 3540384 3540367 3540353 3540352 3540328 3540316 3540303 3540285 Upstream nucleotide (in genome): t c c g c c a g a a a a a a t t t a t c g a g c c g Upstream nucleotide summary: a: 9, c: 7, g: 5, t: 5, other: 0 Downstream nucleotide (in genome): a g g g g a c a a c a t a t g g a t c g a c g c g g Downstream nucleotide summary: a: 8, c: 5, g: 10, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 0, at: 3, ca: 1, cc: 1, cg: 5, ct: 0, ga: 2, gc: 0, gg: 3, gt: 0, ta: 2, tc: 1, tg: 2, tt: 0, other: 0 >chr19:3540281-3540571 (-) atagagatggggtctcacagctaggcgcggtgcctcacgcctgtaatcccagcactttgggaggccaaggagggcagatcatgaggtcaggagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcatggtagcgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcgctcgaaccagggagttggaggttgcagtgagccaagattgcaccattgcgttccagtcttgcgacaagagtgagact >DW417209:17-307 (+) atagagatggggtctcacagctaggcgcggtgcctcacgcctgtgatcccggcactttgggaggccaaggagggcggatcatggggtcgggagatcgagaccatcctggccggcatggtggggccccgtctctactagaagtacaaaggttggctgggcatggtggcgcatgcctgtggtcccagctgcttgggaggctgaggcgggagaatcgctcgggccagggagttggaggttgcagtgggccaagattgcgccattgcattccggtcttgcgacaagagcgggact End editing Edited EST: DW424168, type: ag Aligns to: chr19:58388796-58389068 (-+) All mismatches: ag (47), ag (50), ag (61), ag (71), ag (95), ag (97), ag (98), ag (105), ag (106), ag (107), ag (114), ag (136), ag (137), ag (153), ag (178), ag (182), ag (212), ag (217), ag (220), Editing mismatches: 19, all mismatches: 19, alignment length: 273, cluster length: 174, total number of As: 50 Locations in RNA: 47 50 61 71 95 97 98 105 106 107 114 136 137 153 178 182 212 217 220 Locations in genome: 58389038 58389035 58389024 58389014 58388990 58388988 58388987 58388980 58388979 58388978 58388971 58388949 58388948 58388932 58388907 58388903 58388873 58388868 58388865 Upstream nucleotide (in genome): c g c a t a a a a a c t a g a c c c t Upstream nucleotide summary: a: 8, c: 6, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g g g c a a a a a t g a t g c g t c c Downstream nucleotide summary: a: 6, c: 4, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 2, ag: 0, at: 2, ca: 0, cc: 1, cg: 4, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr19:58388796-58389068 (-) gggaggccgaggtgggaggattacgaggtcaggagttcgagaccagcttggccaacatggtgaaatcctatcactactaaaaatacaaaaattagccaggtgtggtggtacatgcctgtaatcccagctgctcgggaggctgaggcaggataattgcttgaacccaggaggtggaggttgcagtgagccgagatcatgccactacattcagcctggtgacagagtgagactctgtctcaaacaaacaaacaaacaaaaaaatatactttaagt >DW424168:17-289 (+) gggaggccgaggtgggaggattacgaggtcgggggttcgagaccggcttggccagcatggtgaaatcctatcactactgaggatacaagggttagccgggtgtggtggtacatgcctgtggtcccagctgctcggggggctgaggcaggataattgcttgagcccgggaggtggaggttgcagtgagccgagatcgtgccgctgcattcagcctggtgacagagtgagactctgtctcaaacaaacaaacaaacaaaaaaatatactttaagt End editing Edited EST: DW425284, type: ag Aligns to: chr19:16752234-16752503 (-+) All mismatches: tc (36), ag (75), ag (81), ag (160), ag (161), ag (174), ag (193), ag (218), ag (229), ag (233), ag (236), ag (262), ag (273), ag (278), ag (285), Editing mismatches: 14, all mismatches: 15, alignment length: 270, cluster length: 211, total number of As: 58 Locations in RNA: 75 81 160 161 174 193 218 229 233 236 262 273 278 285 Locations in genome: 16752445 16752439 16752360 16752359 16752346 16752327 16752302 16752291 16752287 16752284 16752258 16752247 16752242 16752235 Upstream nucleotide (in genome): c t c a c g a t a a t a c t Upstream nucleotide summary: a: 5, c: 4, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g g a g c g t c a t c t g g Downstream nucleotide summary: a: 2, c: 3, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 3, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 2, tg: 2, tt: 0, other: 0 >chr19:16752234-16752503 (-) caggaggtggaggttgcagtgagccgagatttttccactgcactccagcctggacgacagagctagactgtctccaaaagaaaaagttgtactgggaccgggcacagtggctcacgcctgtaatcctagcactttgggaggccaaggtgggcggatcacctgaggttgggagttcgagaccagcctggccaacatggagaaatgctgtctctactaaaaatgcaaaattagccgagtgtggtggtacaggcctgtaatcccagttactag >DW425284:17-286 (+) caggaggtggaggttgcagcgagccgagatttttccactgcactccagcctggacgacggagctggactgtctccaaaagaaaaagttgtactgggaccgggcacagtggctcacgcctgtaatcctagcactttgggaggccggggtgggcggatcgcctgaggttgggagttcgggaccagcctggccaacatggagaagtgctgtctctgctagaagtgcaaaattagccgagtgtggtggtgcaggcctgtagtcccggttactgg End editing Edited EST: DW427227, type: ag Aligns to: chr19:1829248-1829429 (-+) All mismatches: ag (76), ag (80), ag (85), ag (111), ag (112), ag (117), ag (134), ag (138), ag (177), ag (181), ag (189), ag (195), ca (227), Editing mismatches: 12, all mismatches: 13, alignment length: 182, cluster length: 120, total number of As: 29 Locations in RNA: 76 80 85 111 112 117 134 138 177 181 189 195 Locations in genome: 1829411 1829407 1829402 1829376 1829375 1829370 1829353 1829349 1829310 1829306 1829298 1829292 Upstream nucleotide (in genome): t a t t a c g c g c c t Upstream nucleotide summary: a: 2, c: 4, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): c a g a t g g g g a c t Downstream nucleotide summary: a: 3, c: 2, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 1, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 1, tg: 1, tt: 1, other: 0 >chr19:1829248-1829429 (-) cccatctctactaaaaatacaaaaattagctgggtgtgatggcgcacgcctgtaatcccagctacttggggggctgaggcaggaggtttgcttgaactcgggagatagaggctgcggtgagccaagatcgcaccactatactccagcttgggcagcagagagactgtctcaaaaaaaaaaaa >DW427227:58-239 (+) cccatctctactaaaaatgcaagaattggctgggtgtgatggcgcacgcctgtggtcccggctacttggggggctggggcgggaggtttgcttgaactcgggagatagaggctgcggtgggccgagatcgcgccactgtactccagcttgggcagcagagagactgtctaaaaaaaaaaaaa End editing Edited EST: DW432495, type: ag Aligns to: chr19:5710094-5710308 (-+) All mismatches: ag (11), ag (14), ag (15), ag (16), ag (19), ag (37), ag (38), ag (39), ag (43), ag (46), ag (55), ag (59), ag (81), ag (82), ag (105), ag (115), ag (123), ag (124), ag (135), ag (148), ag (153), ag (155), tc (202), ag (205), Editing mismatches: 23, all mismatches: 24, alignment length: 214, cluster length: 198, total number of As: 60 Locations in RNA: 11 14 15 16 19 37 38 39 43 46 55 59 81 82 105 115 123 124 135 148 153 155 205 Locations in genome: 5710307 5710304 5710303 5710301 5710297 5710279 5710278 5710277 5710273 5710269 5710260 5710256 5710234 5710233 5710210 5710200 5710192 5710191 5710180 5710167 5710162 5710160 5710110 Upstream nucleotide (in genome): g c a c g t a a t a t c t a g a g a c g g g a Upstream nucleotide summary: a: 8, c: 4, g: 7, t: 4, other: 0 Downstream nucleotide (in genome): c a c t g a a a c a g g a t g t a c g g g t a Downstream nucleotide summary: a: 8, c: 4, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 4, ac: 2, ag: 0, at: 2, ca: 1, cc: 0, cg: 2, ct: 1, ga: 1, gc: 1, gg: 4, gt: 1, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr19:5710094-5710308 (-) gaccaacatggagaaaccccgtgtctactaaaaatacaaaaaaaaattagccaggtgtggtggcttatgcctgtaatcccagctactcgggattactgaggcgggagaattgcttgaacctgggaggcagaggttgcggtgagccgagattgcactattgcattccagcctgggcaacaagagcaaaactctgtctcaaaaaaaaaaa-aaa-aaaa >DW432495:10-223 (+) ggccgg-g-ggggaaaccccgtgtctactgggaatgc-agaaaaaattggccgggtgtggtggcttatgcctgtggtcccagctactcgggattactggggcgggagagttgcttgggcctgggaggcggaggttgcggtgggccggggttgcactattgcattccagcctgggcaacaagagcaaaactctgtcccagaaaaaaaaacaaacaaaa End editing Edited EST: DW432517, type: ag Aligns to: chr19:8938385-8938636 (-+) All mismatches: ag (14), ag (15), ag (16), ag (111), ag (121), ag (141), ag (149), ag (181), ag (182), ag (187), ag (196), ag (222), ag (225), ag (227), ag (233), ag (236), ag (262), Editing mismatches: 17, all mismatches: 17, alignment length: 252, cluster length: 249, total number of As: 72 Locations in RNA: 14 15 16 111 121 141 149 181 182 187 196 222 225 227 233 236 262 Locations in genome: 8938636 8938635 8938634 8938539 8938529 8938509 8938501 8938469 8938468 8938463 8938454 8938428 8938425 8938423 8938417 8938414 8938388 Upstream nucleotide (in genome): n a a c c t c c a c c a a t a t t Upstream nucleotide summary: a: 6, c: 6, g: 0, t: 4, other: 1 Downstream nucleotide (in genome): a a g g c g a a g g a a t c t g g Downstream nucleotide summary: a: 6, c: 2, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 2, at: 2, ca: 3, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 1 >chr19:8938385-8938636 (-) aaaggccctgcagcaggagagaggctgccacgctccctgcactgggaacacagggatggctgaagccgagacaagaacagggaaagaagctgggcgcagtggctcacacctgtaatcccagcactttaggagaccaaggtgggctgatcacctgatgtcagaagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacgaaaattagctgggtgtggtggtgcacacctgtagtc >DW432517:14-265 (+) gggggccctgcagcaggagagaggctgccacgctccctgcactgggaacacagggatggctgaagccgagacaagaacagggaaagaagctgggcgcggtggctcacgcctgtaatcccagcactttgggagaccgaggtgggctgatcacctgatgtcagaagttcgggaccggcctggccgacatggtgaaaccccgtctctactagaagtgcgaaagttggctgggtgtggtggtgcacacctgtggtc End editing Edited EST: DW462311, type: ag Aligns to: chr19:7454936-7455288 (-+) All mismatches: ag (22), ag (23), ag (32), ag (34), ag (38), ag (75), ag (76), ag (92), ag (117), ag (129), ag (130), ag (134), ag (156), ag (157), ag (169), ag (171), ag (185), ct (186), ag (224), ag (255), ag (257), ag (275), ag (279), ag (280), ag (305), ag (306), ag (309), ag (310), ag (318), ag (335), ag (339), ga (340), ag (345), ag (352), ag (363), Editing mismatches: 33, all mismatches: 35, alignment length: 353, cluster length: 342, total number of As: 76 Locations in RNA: 22 23 32 34 38 75 76 92 117 129 130 134 156 157 169 171 185 224 255 257 275 279 280 305 306 309 310 318 335 339 345 352 363 Locations in genome: 7455283 7455282 7455273 7455271 7455267 7455230 7455229 7455213 7455188 7455176 7455175 7455171 7455149 7455148 7455136 7455134 7455120 7455081 7455050 7455048 7455030 7455026 7455025 7455000 7454999 7454996 7454995 7454987 7454970 7454966 7454960 7454953 7454942 Upstream nucleotide (in genome): t a t c c t a t a c a g a a t c c t t g t t a c a c a c t t t g c Upstream nucleotide summary: a: 9, c: 9, g: 3, t: 12, other: 0 Downstream nucleotide (in genome): a c c g t a t c c a g t a g c g c g g g g a c a g a t c g g t g c Downstream nucleotide summary: a: 7, c: 9, g: 12, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 3, at: 2, ca: 3, cc: 3, cg: 2, ct: 1, ga: 0, gc: 0, gg: 2, gt: 1, ta: 3, tc: 3, tg: 5, tt: 1, other: 0 >chr19:7454936-7455288 (-) tgagtaactgcgattacaggcatgtgccaccatgccccgctaattgttttgtgtttttaatggagatggggtcttaccatgttggccaggctggtctcaaactcctgacctcaagtgatcctcccaccttggtctcccaaagtgctgggattacaggtgtaagccaccacgcccagcctttacccacattatttcttttttctttttaggaacagggtcttgctctgtggcacaggctagagggcagtggcaaatcatagctaactgtagctttgaacacctgggctcaagcaatgctgccacctcagcctcccgagtagctaggattataggcgagtgccaccacacctggc >DW462311:17-369 (+) tgagtggctgcgattgcgggcgtgtgccaccatgccccgctaattgttttgtgtttttggtggagatggggtcttgccatgttggccaggctggtctcaagctcctgacctcgggtggtcctcccaccttggtctcccagggtgctgggattgcgggtgtaagccaccgtgcccagcctttacccacattatttcttttttctttttgggaacagggtcttgctctgtggcacaggctggggggcagtggcaaatcatggctggctgtagctttgaacacctgggctcgggcggtgctgccgcctcagcctcccgagtggctgagattgtaggcgggtgccaccacgcctggc End editing Edited EST: BQ226607, type: ag Aligns to: chr19:3541575-3542141 (-+) All mismatches: ag (45), ag (61), ag (62), ag (67), ag (83), ag (84), ag (92), ag (97), ag (102), ag (107), ag (121), ag (133), ag (140), ag (141), ag (155), ag (161), ag (167), ag (202), ag (206), ag (214), ag (223), ag (226), ag (238), ag (239), ag (263), ag (298), ag (515), ag (550), ag (551), ag (559), Editing mismatches: 30, all mismatches: 30, alignment length: 567, cluster length: 515, total number of As: 132 Locations in RNA: 45 61 62 67 83 84 92 97 102 107 121 133 140 141 155 161 167 202 206 214 223 226 238 239 263 298 515 550 551 559 Locations in genome: 3542097 3542081 3542080 3542075 3542059 3542058 3542050 3542045 3542040 3542035 3542021 3542009 3542002 3542001 3541987 3541981 3541975 3541940 3541936 3541928 3541919 3541916 3541904 3541903 3541879 3541844 3541627 3541592 3541591 3541583 Upstream nucleotide (in genome): c t a c c a t c g c c c a a t t a c t a c g g a g g t t a c Upstream nucleotide summary: a: 8, c: 10, g: 5, t: 7, other: 0 Downstream nucleotide (in genome): g a t g a g g c g g g t a c a c t g c g g g a c g g g a t c Downstream nucleotide summary: a: 6, c: 6, g: 14, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 2, at: 3, ca: 1, cc: 2, cg: 6, ct: 1, ga: 1, gc: 0, gg: 4, gt: 0, ta: 3, tc: 2, tg: 2, tt: 0, other: 0 >chr19:3541575-3542141 (-) agcttttaaaacacaattaaaacagcacaaaattgtctgggcgcagtggctcatgcctgtaatcccagcactttgggaggccaaggtgggtagatcacctgaggtcaggagttcgagaccagcctgaccaacatggtgaaaccccgtctctactaaaaatacaaaaattagtcaggtgtggtgatggacacctgtggtcccagctactcgggaagctgaggcaggagaattagcttgaacccgggaggcggaggttgcagtgagccgagattgcgtcactgcactccagcctgggtgagagagcgagactctgtctcaacacaaacaaaacagcacagaataatattcaatgagaaatgagcccctcacccctgctgtcggccccgtacccacctgccactcactactttctggtgtttcctcccaggagcaggtggtacatgcactcacccccgttattacacacttgcgggagcccattcactgcatctccatttttttaaaaaatagaaatagggtcttgcactgggtgcggtggctcatgcctgtaatcccagcactgtggga >BQ226607:1-567 (+) agcttttaaaacacaattaaaacagcacaaaattgtctgggcgcggtggctcatgcctgtggtcccggcactttgggaggccggggtgggtggatcgcctggggtcgggagttcgagaccggcctgaccaacgtggtgaggccccgtctctactgaaaatgcaaaagttagtcaggtgtggtgatggacacctgtggtcccggctgctcgggaggctgaggcgggggaattagcttgggcccgggaggcggaggttgcagtgggccgagattgcgtcactgcactccagcctgggtgggagagcgagactctgtctcaacacaaacaaaacagcacagaataatattcaatgagaaatgagcccctcacccctgctgtcggccccgtacccacctgccactcactactttctggtgtttcctcccaggagcaggtggtacatgcactcacccccgttattacacacttgcgggagcccattcactgcatctccatttttttaaaaaatagaaatggggtcttgcactgggtgcggtggctcatgcctgtggtcccagcgctgtggga End editing Edited EST: CD722218, type: ag Aligns to: chr19:4330712-4331065 (-+) All mismatches: ag (62), tc (67), ag (115), ag (136), ag (151), ag (152), ag (176), ag (177), ag (182), ag (184), ag (187), ag (217), ag (218), ag (223), ag (240), ag (244), ag (250), ag (259), ag (279), ag (283), ag (287), ag (288), ag (322), ag (355), Editing mismatches: 23, all mismatches: 24, alignment length: 354, cluster length: 294, total number of As: 88 Locations in RNA: 62 115 136 151 152 176 177 182 184 187 217 218 223 240 244 250 259 279 283 287 288 322 355 Locations in genome: 4331005 4330952 4330931 4330916 4330915 4330891 4330890 4330885 4330883 4330880 4330850 4330849 4330844 4330827 4330823 4330817 4330808 4330788 4330784 4330780 4330779 4330745 4330712 Upstream nucleotide (in genome): c c c c a t a t c a t a c g c a a c g c a a a Upstream nucleotide summary: a: 9, c: 9, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g g a a c a a c a a a t g g g t c g g a g c n Downstream nucleotide summary: a: 8, c: 4, g: 8, t: 2, other: 1 Dinucleotide summary: aa: 2, ac: 3, ag: 1, at: 2, ca: 4, cc: 0, cg: 5, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 1 >chr19:4330712-4331065 (-) tgtgagccaccatgcctggccacagagtgctaagtttttaaaaattagctgacattggccaggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggctggcagatcatgaggtcaggagatcaagaccatcctggccaacacggtgaaaccctgtctctactaaaaatacaaaaatcagctgggcgtggtggcgggagcctgtaattccagctactcgggaggctgaggcaggagaatggcttgaacccgggagtcggaggttgcagtgagccaagatcgcgccactgcactccagcttggtgacagaactaaactccatctcaaaaaaaaaaaaaaaaaaa >CD722218:2-355 (+) tgtgagccaccatgcctggccacagagtgctaagtttttaaaaattagctgacattggccgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggctggcggatcatgaggtcaggagatcgagaccatcctggccggcacggtgaaaccctgtctctactggaaatgcgaagatcagctgggcgtggtggcgggagcctgtggttccggctactcgggaggctggggcgggagagtggcttgagcccgggagtcggaggttgcggtgggccgggatcgcgccactgcactccagcttggtgacagagctaaactccatctcaaaaaaaaaaaaaaaaaag End editing Edited EST: AW009286, type: ga Aligns to: chr19:6751072-6751518 (-+) All mismatches: ga (180), ga (189), ga (199), gc (202), ga (207), ga (208), ga (209), ga (214), ga (222), ga (224), at (228), ga (229), ga (230), gt (235), ga (236), ga (237), ga (238), ga (245), ga (247), ga (248), ga (253), gc (256), ga (259), ga (262), ga (265), ga (269), ga (283), ga (289), ga (290), ga (293), ga (294), ga (295), ga (303), ga (305), ga (307), ga (309), ga (314), ga (315), ga (317), ga (318), ga (321), ga (322), ga (324), ga (325), ga (327), ga (328), ga (329), ga (333), gt (336), ga (342), ga (356), ga (360), ga (365), ga (366), ga (367), ga (375), ga (384), ga (398), ga (403), ga (405), ga (418), ga (424), ga (426), ga (430), ga (432), ga (438), ga (441), ga (442), Editing mismatches: 63, all mismatches: 68, alignment length: 447, cluster length: 263, total number of Gs: 74 Locations in RNA: 180 189 199 207 208 209 214 222 224 229 230 236 237 238 245 247 248 253 259 262 265 269 283 289 290 293 294 295 303 305 307 309 314 315 317 318 321 322 324 325 327 328 329 333 342 356 360 365 366 367 375 384 398 403 405 418 424 426 430 432 438 441 442 Locations in genome: 6751339 6751330 6751320 6751312 6751311 6751310 6751305 6751297 6751295 6751290 6751289 6751283 6751282 6751281 6751274 6751272 6751271 6751266 6751260 6751257 6751254 6751250 6751236 6751230 6751229 6751226 6751225 6751224 6751216 6751214 6751212 6751210 6751205 6751204 6751202 6751201 6751198 6751197 6751195 6751194 6751192 6751191 6751190 6751186 6751177 6751163 6751159 6751154 6751153 6751152 6751144 6751135 6751121 6751117 6751115 6751102 6751095 6751093 6751089 6751087 6751081 6751078 6751077 Upstream nucleotide (in genome): a a c c g g a a t a g g g g c t g a a a c a c t g a g g t a c t c g a g a g a g t g g c c c t c g g c t a t a c a a a t c t g Upstream nucleotide summary: a: 19, c: 14, g: 19, t: 11, other: 0 Downstream nucleotide (in genome): g g a g g g a t c g t g g c t g c a c c a c t g c g g t a c t a g a g t g a g t g g c t c c a g g t t t a a g g a a t c c g a Downstream nucleotide summary: a: 14, c: 13, g: 23, t: 13, other: 0 Dinucleotide summary: aa: 5, ac: 4, ag: 8, at: 2, ca: 2, cc: 3, cg: 4, ct: 5, ga: 3, gc: 4, gg: 7, gt: 5, ta: 4, tc: 2, tg: 4, tt: 1, other: 0 >chr19:6751072-6751518 (-) tatataatttcttttttttttttcccatttttgtataaaacaaaatggccggagccgagcggcagaaagaaaagatgtaaaacatgagtatgtacatcaatggtggaacgatggtagaaggcacagcgggtccgtccggtgtgacaggtaggactgggttgggggtggagggggcagcaggttacacaggtctcagccgaagccacggggtcagaaataaagtgcataggtcctggggctccccgtggcccagaagcagcagccgacagcccccctcttcccgtctctggcagggttcaattgagcgtgactcggaggtaggaggtgggcacgtagccctcgcctccctctttccgcctgacccgggtccagccgtcccctttgtcttcttccataaga-ctgaggtcttcaccc-tcggccatagagatagtgccctcgctggaccct >AW009286:1-447 (+) tatataatttcttttttttttttcccatttttgtataaaacaaaatggccggagccgagcggcagaaagaaaagatgtaaaacatgagtatgtacatcaatggtggaacgatggtagaaggcacagcgggtccgtccggtgtgacaggtaggactgggttgggggtggagggggcancaagttacacaagtctcanccaaacccacaaagtcaaaaataaaatacattaatccttaaactccccataacccaaaaccaacaaccaacaacccccctcttcccatctctaacaaaattcaattaaacataactcaaaaataaaaaataaacacatatccctcacctccctctttccacctaacccaaatccanccatcccctttatcttcttccataaaaactaaa-tcttcacccctca-ccataaaaataataccctcactaaaccct End editing Edited EST: AW276958, type: ga Aligns to: chr19:8367011-8367269 (-+) All mismatches: ga (106), ga (126), ga (135), ga (165), ga (171), ag (177), ga (178), ga (179), ga (189), ga (190), ga (196), ga (200), ga (206), ga (208), ga (223), ga (226), ga (231), ga (235), ga (237), ga (239), ga (241), ga (242), ga (251), Editing mismatches: 22, all mismatches: 23, alignment length: 259, cluster length: 146, total number of Gs: 49 Locations in RNA: 106 126 135 165 171 178 179 189 190 196 200 206 208 223 226 231 235 237 239 241 242 251 Locations in genome: 8367171 8367151 8367142 8367112 8367106 8367099 8367098 8367088 8367087 8367081 8367077 8367071 8367069 8367054 8367051 8367046 8367042 8367040 8367038 8367036 8367035 8367026 Upstream nucleotide (in genome): g c a a t a g a g a c t t t t c t a g t g a Upstream nucleotide summary: a: 7, c: 3, g: 5, t: 7, other: 0 Downstream nucleotide (in genome): a g g g g g c g g a g t c c c t a g t g c t Downstream nucleotide summary: a: 3, c: 5, g: 10, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 5, at: 1, ca: 0, cc: 0, cg: 2, ct: 1, ga: 1, gc: 2, gg: 1, gt: 1, ta: 1, tc: 3, tg: 2, tt: 1, other: 0 >chr19:8367011-8367269 (-) ccgggcacaccagccctcagagacctgagctcttctggccacgtggaacctcgaacccgagctcctgcagaagtggccctggagattgagggtccctggacactccctatggagatccggggagctaggatggggaacctgccacagccagaactgaggggctggccccaggcagctcccagggggtagaacggccctgtgcttaagacactcctgctgccccgtctgagggtggcaattaaagttgcttcacatcctc >AW276958:8-266 (+) ccgggcacaccagccctcanagacctgagctcttctggccacgtggaacctcgaacccgagctcctgcagaagtggccctggagattgagggtccctgaacactccctatggagatccagggagctaagatggggaacctgccacanccanaactgaagggctagccccgaacagctcccaaagggtaaaacagccctatacttaagacactcctactaccccatctaaagataacaattaaaattgcttcacatcctc End editing Edited EST: BE878775, type: ag Aligns to: chr19:16749130-16749500 (-+) All mismatches: ag (116), ag (118), ag (122), ag (155), ag (164), ag (213), ag (216), ag (217), ag (218), ag (222), ag (230), ag (249), ag (250), ag (254), ag (258), ag (279), ag (280), ag (284), ag (301), ag (319), Editing mismatches: 20, all mismatches: 20, alignment length: 371, cluster length: 204, total number of As: 57 Locations in RNA: 116 118 122 155 164 213 216 217 218 222 230 249 250 254 258 279 280 284 301 319 Locations in genome: 16749385 16749383 16749379 16749346 16749337 16749288 16749285 16749284 16749283 16749279 16749271 16749252 16749251 16749247 16749243 16749222 16749221 16749217 16749200 16749182 Upstream nucleotide (in genome): a c t c a t a a a t c a a c t a a c c g Upstream nucleotide summary: a: 9, c: 6, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): c c g g g c a a a g t a t g c a a c g g Downstream nucleotide summary: a: 6, c: 5, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 6, ac: 1, ag: 1, at: 1, ca: 0, cc: 2, cg: 3, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 2, tg: 2, tt: 0, other: 0 >chr19:16749130-16749500 (-) tatattagtcagctagagctgtgtattaggccatcttgcattgctataaagaaatgggtaatttataagaaaagaggttaatggccaggcacggtggctcatgcctgtaatcccaacacttagggaggctgaggtgggtggatcacctgaggtcaggagttcaaggccagcctggccaatgtggtgaaaccctgtctctactaaaaaaaattacaaaaattagccgggcatggtggcgggcacctgtaaatccagctactcaggagtctgaggcaggaaaatcacctgaacccgggaggcaggggttgcagtgagccgagatcgtgccattgcactccagcctgtgcagcaagagtgaagctctgtctcaa >BE878775:1-371 (+) tatattagtcagctagagctgtgtattaggccatcttgcattgctataaagaaatgggtaatttataagaaaagaggttaatggccaggcacggtggctcatgcctgtaatcccagcgcttggggaggctgaggtgggtggatcacctgaggtcgggagttcagggccagcctggccaatgtggtgaaaccctgtctctactaaaaaaaattgcagggattggccgggcgtggtggcgggcacctgtaggtccggctgctcaggagtctgaggcaggaggatcgcctgaacccgggaggcgggggttgcagtgagccgggatcgtgccattgcactccagcctgtgcagcaagagtgaagctctgtctcaa End editing Edited EST: AA578374, type: ag Aligns to: chr19:3540184-3540537 (-+) All mismatches: ag (11), ag (12), ag (17), ag (42), ag (55), ag (79), ag (81), ag (87), ag (88), ag (89), ag (104), ag (105), ag (109), ag (114), ag (118), ag (131), ca (140), ag (144), ag (145), ag (150), ag (154), ag (174), ag (186), ag (189), ag (214), ag (215), ag (249), ag (253), ag (308), Editing mismatches: 28, all mismatches: 29, alignment length: 354, cluster length: 298, total number of As: 92 Locations in RNA: 11 12 17 42 55 79 81 87 88 89 104 105 109 114 118 131 144 145 150 154 174 186 189 214 215 249 253 308 Locations in genome: 3540527 3540526 3540521 3540496 3540483 3540459 3540457 3540451 3540450 3540449 3540434 3540433 3540429 3540424 3540420 3540407 3540394 3540393 3540388 3540384 3540364 3540352 3540349 3540324 3540323 3540289 3540285 3540230 Upstream nucleotide (in genome): t a c c c a c g a a a a t a t t t a c t g a c c a g g t Upstream nucleotide summary: a: 10, c: 7, g: 4, t: 7, other: 0 Downstream nucleotide (in genome): a t g g g c t a a c a a c a g g a t g c g c g a g g g g Downstream nucleotide summary: a: 8, c: 5, g: 12, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 3, ag: 1, at: 2, ca: 1, cc: 0, cg: 5, ct: 1, ga: 1, gc: 0, gg: 3, gt: 0, ta: 2, tc: 2, tg: 3, tt: 0, other: 0 >chr19:3540184-3540537 (-) tcacgcctgtaatcccagcactttgggaggccaaggagggcagatcatgaggtcaggagatcgagaccatcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcatggtagcgcatgcctgtaatcccagctacttgggaggctgaggcaggagaatcgctcgaaccagggagttggaggttgcagtgagccaagattgcaccattgcgttccagtcttgcgacaagagtgagactccgtccaaaaaaaaaaacaaaaattagctgggcatgtggcacaaacctgtagtcctagctactcagaaggcttgagatggaagaatcctagaacctg >AA578374:1-354 (+) tcacgcctgtggtcccggcactttgggaggccaaggagggcggatcatgaggtcgggagatcgagaccatcctggccagcgtggtggggccccgtctctactaggaatgcaaagattggctgggcatggtggcgcatgcatgtggtcccggctgcttgggaggctgaggcaggggaatcgctcgagccggggagttggaggttgcagtgagccgggattgcaccattgcgttccagtcttgcgacaagggtgggactccgtccaaaaaaaaaaacaaaaattagctgggcatgtggcacaaacctgtggtcctagctactcagaaggcttgagatggaagaatcctagaacctg End editing Edited EST: AI299363, type: ag Aligns to: chr19:57785224-57785678 (-+) All mismatches: ag (51), ag (75), ag (111), ag (118), ag (121), ag (123), ag (156), ag (162), ag (165), ag (179), ag (241), ag (263), Editing mismatches: 12, all mismatches: 12, alignment length: 455, cluster length: 213, total number of As: 39 Locations in RNA: 51 75 111 118 121 123 156 162 165 179 241 263 Locations in genome: 57785628 57785604 57785568 57785561 57785558 57785556 57785523 57785517 57785514 57785500 57785438 57785416 Upstream nucleotide (in genome): c c c g t c t t t c a t Upstream nucleotide summary: a: 1, c: 5, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g g g c c g t g g c a a Downstream nucleotide summary: a: 2, c: 3, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 0, cc: 1, cg: 4, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 1, other: 0 >chr19:57785224-57785678 (-) agatggagtcttgctctgtctcccaggctggagtgcagtggcgcaatctcagctcactgcaacctccgcctcccaggttcaagccattctcctgcctgagcctcttgagcagctgggactacagttgcacgccaccacgcccggctaatttttgtatttttagtagagacggggtttcaccatgttggccaggatggtctggatctcttgaccttgtgatccacccgcctcggcctcccaaagtcctgggattacagggcgtaagccaccgtgcctggtccattttagtcatcttgacatcacgtaacacctactatgatgatacaaggaggacactttgccaatctgatgttcttccccttaacccacaattctagactaataatgaaaaaataccagacaaatgcaaattaagggacattgcattatgagtactccagaagtatgtagatcat >AI299363:1-455 (+) agatggagtcttgctctgtctcccaggctggagtgcagtggcgcaatctcggctcactgcaacctccgcctcccgggttcaagccattctcctgcctgagcctcttgagcggctggggctgcggttgcacgccaccacgcccggctaatttttgtgtttttggtggagacggggtttcgccatgttggccaggatggtctggatctcttgaccttgtgatccacccgcctcggcctcccagagtcctgggattacagggcgtgagccaccgtgcctggtccattttagtcatcttgacatcacgtaacacctactatgatgatacaaggaggacactttgccaatctgatgttcttccccttaacccacaattctagactaataatgaaaaaataccagacaaatgcaaattaagggacattgcattatgagtactccagaagtatgtagatcat End editing Edited EST: AW631233, type: ga Aligns to: chr19:18652480-18652807 (-+) All mismatches: ga (128), ga (178), ga (193), ga (197), ga (202), ga (204), ga (206), ga (211), ga (217), ga (220), ga (221), ga (223), ga (229), ga (230), ga (231), ga (241), ga (242), ga (244), ga (245), ga (247), ga (248), ga (250), ga (251), ga (255), ga (264), ga (266), ga (267), ga (272), ga (273), ga (277), ga (288), ga (291), ga (297), ga (303), ga (305), ga (309), ga (315), gc (320), ga (321), ga (334), ga (335), ga (338), ga (339), ga (352), ga (356), Editing mismatches: 44, all mismatches: 45, alignment length: 329, cluster length: 228, total number of Gs: 95 Locations in RNA: 128 178 193 197 202 204 206 211 217 220 221 223 229 230 231 241 242 244 245 247 248 250 251 255 264 266 267 272 273 277 288 291 297 303 305 309 315 321 334 335 338 339 352 356 Locations in genome: 18652708 18652658 18652643 18652639 18652634 18652632 18652630 18652625 18652619 18652616 18652615 18652613 18652607 18652606 18652605 18652595 18652594 18652592 18652591 18652589 18652588 18652586 18652585 18652582 18652573 18652571 18652570 18652565 18652564 18652560 18652549 18652546 18652540 18652534 18652532 18652528 18652522 18652516 18652503 18652502 18652499 18652498 18652484 18652481 Upstream nucleotide (in genome): c a a t t a t t c t g a t g g c g c g a g a g t t g g t g c t t g c a c a g t g t g a a Upstream nucleotide summary: a: 10, c: 7, g: 14, t: 13, other: 0 Downstream nucleotide (in genome): a g g a a t a c c g a g g g a g c g a g a g c a g g c g c a c c a a c c c c g c g a g c Downstream nucleotide summary: a: 13, c: 14, g: 16, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 3, ag: 6, at: 1, ca: 3, cc: 2, cg: 2, ct: 0, ga: 6, gc: 6, gg: 2, gt: 0, ta: 4, tc: 3, tg: 6, tt: 0, other: 0 >chr19:18652480-18652807 (-) agggccaattcctgtccccccagcagcatggcatcgtgtgctgaaccctctgagccctctgccccactgcccgccggggtcccaccgctcgaggacttcgaggtactggatggggttgaggatgcagagggtgaggaggaagaggaggaggaagaggaggaagaggatgacctgagtgagctgccaccgctggaggacatgggacaacccccggcggaggagg-ctgagcagcctggggccctggcccgagagttccttgctgccatggagcccgagcccgccccagccccggccccagaagagtggctggacattctgggtaag-gagc >AW631233:29-357 (+) agggccaattcctgtccccccagcagcatggcatcgtgtgctgaaccctctgagccctctgccccactgcccgccggggtcccaccgctcgaggacttcaaggtactggatggggttgaggatgcagagggtgaggaggaagaggaggaagaanangangaanaagataacctaaataagctaccaccactaaaagacataaaacaacccccaacaaaaaaaagctaagcancctagaaccctaacccaagagttccttactaccatgaagcccaaacccaccccaacccccaccccagaagagtaactaaacattctggg-aaacgaac End editing Edited EST: AL602932, type: ag Aligns to: chr19:48581839-48582440 (-+) All mismatches: ag (30), ag (49), ag (65), ag (79), ag (89), ag (134), ag (137), ag (143), ag (148), ag (149), ag (152), ag (177), ag (178), ag (183), ag (187), ag (194), ag (207), ag (218), ag (227), ag (230), ag (239), ag (247), ag (248), ag (249), ag (312), ga (314), tc (435), Editing mismatches: 25, all mismatches: 27, alignment length: 602, cluster length: 283, total number of As: 89 Locations in RNA: 30 49 65 79 89 134 137 143 148 149 152 177 178 183 187 194 207 218 227 230 239 247 248 249 312 Locations in genome: 48582411 48582392 48582376 48582362 48582352 48582307 48582304 48582298 48582293 48582292 48582289 48582264 48582263 48582258 48582254 48582247 48582234 48582223 48582214 48582211 48582202 48582194 48582193 48582192 48582129 Upstream nucleotide (in genome): t c c c c t t t a a t t a c t g g g a c c c a a a Upstream nucleotide summary: a: 7, c: 8, g: 3, t: 7, other: 0 Downstream nucleotide (in genome): g g a c g c c c a t g a t g c g g a g g g a a a g Downstream nucleotide summary: a: 7, c: 5, g: 11, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 2, at: 2, ca: 2, cc: 1, cg: 5, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 1, tc: 4, tg: 2, tt: 0, other: 0 >chr19:48581839-48582440 (-) tggattttgggattgtggctgggcatggtagctcacgtctgtaatcccagcactttgggaggccaaggcgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggcgaaaccccatctctactacaaatacaaaaattagccaggcatggtgcatgcgcctgtaatcccagctacttgggaggctgagacaggagaatcgcttgaacttgggaagcagaggttgcagtgagccaaaattggccattgcactccagcctgggcaacagagcgagactaagtctcaaaaaaaaaaaaaaaaggattttaggattttttgttctgtgaaaaatgatagtattttgatgggaattacactggacttgtagattgcttttggcagtatggtcattttcacaatattgattctacccatccatgagcatgggatgtgtttccatttgtttgtgtcatctatgatttctttcagcagtgttttgtagttttccttgtagcagtctttcacctccttggttaggtatattcctgagtattttattttatttttttgcagctgttgtaaaagggg-ttgagttcttgatttgaatctca >AL602932:1-602 (+) tggattttgggattgtggctgggcatggtggctcacgtctgtaatcccggcactttgggaggccgaggcgggtggatcgcctgaggtcgggagtttgagaccagcctggccaacatggcgaaaccccatctctgctgcaaatgcaaaggttggccaggcatggtgcatgcgcctgtggtcccggctgcttggggggctgagacaggggaatcgcttggacttgggaggcggaggttgcggtgagccgggattggccattgcactccagcctgggcaacagagcgagactaagtctcaaaaaaaaaaaaaaagga-ttttaggattttttgttctgtgaaaaatgatagtattttgatgggaattacactggacttgtagattgcttttggcagtatggtcattttcacaatattgattctacccatccatgagcacgggatgtgtttccatttgtttgtgtcatctatgatttctttcagcagtgttttgtagttttccttgtagcagtctttcacctccttggttaggtatattcctgagtattttattttatttttttgcagctgttgtaaaagggggttgagttcttgatttgaatctca End editing Edited EST: DA322296, type: ag Aligns to: chr1:1253210-1253664 (-+) All mismatches: ag (143), ag (197), ag (200), ag (210), ag (231), ag (235), ag (239), ag (246), ag (251), ag (279), ag (289), ag (308), ag (314), ag (322), ag (347), ag (351), ag (352), ag (436), Editing mismatches: 18, all mismatches: 18, alignment length: 455, cluster length: 294, total number of As: 87 Locations in RNA: 143 197 200 210 231 235 239 246 251 279 289 308 314 322 347 351 352 436 Locations in genome: 1253522 1253468 1253465 1253455 1253434 1253430 1253426 1253419 1253414 1253386 1253376 1253357 1253351 1253343 1253318 1253314 1253313 1253229 Upstream nucleotide (in genome): a g c a t a a a a c t c a g g c a a Upstream nucleotide summary: a: 9, c: 4, g: 3, t: 2, other: 0 Downstream nucleotide (in genome): t c t c c a a a t g c g t a g a g t Downstream nucleotide summary: a: 5, c: 4, g: 4, t: 5, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 4, ca: 1, cc: 0, cg: 2, ct: 1, ga: 1, gc: 1, gg: 1, gt: 0, ta: 0, tc: 2, tg: 0, tt: 0, other: 0 >chr1:1253210-1253664 (-) ttttgttgggcttcctgcattttttctactttttacttgggataatttgccttctgcctgaagaatatgagtgtgggtctgctggtgctgaattctgtcaatttttatttgccttggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccgagacaggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctactaaacaaaatacaaaaaaattagctgggcgtggtgcgggcgcctgcagtcccagctactcgggaggctgaaaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagccaagatcccaccactgcactccagcctgggagacagagcgagacgcgagactccggctcaaaaaaaaaaaatttatttgcctgcaaatggatttactttatcctcg >DA322296:1-455 (+) ttttgttgggcttcctgcattttttctactttttacttgggataatttgccttctgcctgaagaatatgagtgtgggtctgctggtgctgaattctgtcaatttttatttgccttggccaggcgcggtggctcacgcctgtagtcccagcactttgggaggccgagacaggcggatcacgaggtcaggagatcgaggccgtcctggctagcacggtgaaaccctgtctctgctagacagaatacagaaaagttagctgggcgtggtgcgggcgcctgcggtcccagctgctcgggaggctgaaaggcgggagagtggcgtggacctgggaggcggagcttgcagtgggccgggatcccaccactgcactccagcctgggagacagagcgagacgcgagactccggctcaaaaaaaaaaaatttatttgcctgcaagtggatttactttatcctcg End editing Edited EST: DA055041, type: ag Aligns to: chr1:16949179-16949639 (-+) All mismatches: ag (167), ag (193), ag (217), ag (230), ag (262), ag (263), ag (266), ag (276), ag (278), ag (282), ag (336), ag (346), ag (358), ag (411), ag (415), ga (427), Editing mismatches: 15, all mismatches: 16, alignment length: 460, cluster length: 250, total number of As: 47 Locations in RNA: 167 193 217 230 262 263 266 276 278 282 336 346 358 411 415 Locations in genome: 16949473 16949447 16949423 16949410 16949378 16949377 16949374 16949364 16949362 16949358 16949304 16949294 16949282 16949228 16949224 Upstream nucleotide (in genome): c a a c c a t t c c c a a c c Upstream nucleotide summary: a: 5, c: 8, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): c t c g a g g c g c t g c g t Downstream nucleotide summary: a: 1, c: 5, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 2, at: 1, ca: 1, cc: 2, cg: 3, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr1:16949179-16949639 (-) ctgttaaacggggatgaggataaactacataggcatgttatgaagacaaaatgaggttatgtctaaaatacttagctgggtgcttgacgcatagtaagtgctgagtcagtaatagggtttttgtttgtttgtttgtttttgtttgtttgttttgagatggagtttcactcttgttgcccaggctggagtgcaatggcgcgattttggctcacctcaacctccgcctcccaggttcaagcgattctcctgcctcagccttccaagtagctgggattacaggcacgcgccaccatgcctggctaattttgtatttttagtagagacggggtttcaccatgttggtcaagctggtctcgaactctcgacctcaggtgatctgcccacttcggcctcccaaagtgctgggattacaggcatgagccaccgcgcccagcctgtttgattttttgagacagagtctc >DA055041:1-460 (+) ctgttaaacggggatgaggataaactacataggcatgttatgaagacaaaatgaggttatgtctaaaatacttagctgggtgcttgacgcatagtaagtgctgagtcagtaatagggtttttgtttgtttgtttgtttttgtttgtttgttttgagatggagtttcgctcttgttgcccaggctggagtgcagtggcgcgattttggctcacctcagcctccgcctcccgggttcaagcgattctcctgcctcagccttccgggtggctgggattgcgggcgcgcgccaccatgcctggctaattttgtatttttagtagagacggggtttcaccgtgttggtcaggctggtctcgagctctcgacctcaggtgatctgcccacttcggcctcccaaagtgctgggat-acgggcgtgagccaccgcacccagcctgtttgattttttgagacagagtctc End editing Edited EST: DA569858, type: ag Aligns to: chr1:151419989-151420420 (-+) All mismatches: ag (180), ag (182), ag (183), ag (188), ag (200), ag (209), ag (242), ag (259), ag (260), ag (307), ag (311), ag (372), ag (398), ag (419), ag (423), ag (428), Editing mismatches: 16, all mismatches: 16, alignment length: 434, cluster length: 247, total number of As: 76 Locations in RNA: 180 182 183 188 200 209 242 259 260 307 311 372 398 419 423 428 Locations in genome: 151420241 151420239 151420238 151420233 151420221 151420212 151420179 151420162 151420161 151420116 151420112 151420051 151420025 151420004 151420000 151419995 Upstream nucleotide (in genome): t t a c a c c t a t c a g c g g Upstream nucleotide summary: a: 4, c: 5, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): t a t g t g g a g g g g g g g g Downstream nucleotide summary: a: 2, c: 0, g: 11, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 2, ca: 0, cc: 0, cg: 5, ct: 0, ga: 0, gc: 0, gg: 3, gt: 0, ta: 2, tc: 0, tg: 1, tt: 1, other: 0 >chr1:151419989-151420420 (-) aagctgaaacatcttgactatcagcaaagattttatcaaacgatgctagggttgtgtcagaaggactcagcagccaactgaagacgttcccactggccaaaatagggcacattgagtatctgtaaagataactgcatggatcaaaacacatcaaaagctgggcacagtggctcatacctataatcccagcactttgggaatctgaggcaggtgtgttgcttgagtccaggagtttgagaccagcctgggaaacatggtaagaccccctctctaccaaaaaaaaaaaaaaaaaaaaaaaaaaa--ttagccagacatggtggctcttggttatcccaagagttagttagctctttgtcccaagagttactcaagaggttgaggtgggaggatttcttgagcctgggaggtggaggttgcagtgagctgagattgt >DA569858:1-434 (+) aagctgaaacatcttgactatcagcaaagattttatcaaacgatgctagggttgtgtcagaaggactcagcagccaactgaagacgttcccactggccaaaatagggcacattgagtatctgtaaagataactgcatggatcaaaacacatcaaaagctgggcacagtggctcatacctgtggtcccggcactttgggagtctgaggcgggtgtgttgcttgagtccaggagtttgagaccggcctgggaaacatggtgggaccccctctctaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaattggccggacatggtggctcttggttatcccaagagttagttagctctttgtcccaagagttactcaggaggttgaggtgggaggatttcttgggcctgggaggtggaggttgcggtgggctgggattgt End editing Edited EST: DW408587, type: ag Aligns to: chr1:115024448-115024774 (-+) All mismatches: ag (135), ag (136), ag (141), ag (166), ag (177), ag (189), ag (190), ag (232), ag (235), ag (246), ag (254), ag (273), ag (278), ag (282), ag (285), ag (307), ta (310), Editing mismatches: 16, all mismatches: 17, alignment length: 327, cluster length: 173, total number of As: 51 Locations in RNA: 135 136 141 166 177 189 190 232 235 246 254 273 278 282 285 307 Locations in genome: 115024656 115024655 115024650 115024625 115024614 115024602 115024601 115024559 115024556 115024545 115024537 115024518 115024513 115024509 115024506 115024484 Upstream nucleotide (in genome): t a c c a c a a t t c a c t t c Upstream nucleotide summary: a: 5, c: 6, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): a t g g g a g a c g t c g c g c Downstream nucleotide summary: a: 3, c: 4, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 1, ca: 1, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr1:115024448-115024774 (-) cactgttgtcacatttcaggtattcagtaatcatgtgtggctgatggctgccatattagacagtgcagatatagaacattttgtcatggcagaaagttttgttggactaatggcctgtaatcccagctctttgggaggccgaggtgggcagatcacctgaagtcaggagttcaagaccagccgcgccaacatggtgaaaccccatctctactaaaaatacaaaaatattagctgggcatggtggcgcacatctgtaacctcagctactagggggctgaggcaggagaatcacttgaactgggtaggcggaggttgcagtgaggtgcg >DW408587:17-343 (+) cactgttgtcacatttcaggtattcagtaatcatgtgtggctgatggctgccatattagacagtgcagatatagaacattttgtcatggcagaaagttttgttggactaatggcctgtggtcccggctctttgggaggccgaggtgggcggatcacctgaggtcaggagttcgggaccagccgcgccaacatggtgaaaccccatctctactaaagatgcaaaaatattggctgggcgtggtggcgcacatctgtagcctcggctgctggggggctgaggcaggagaatcgctagaactgggtaggcggaggttgcagtgaggtgcg End editing Edited EST: DW415436, type: ag Aligns to: chr1:1841673-1841970 (-+) All mismatches: ag (190), ag (206), ag (208), ag (210), ag (212), ag (243), gc (259), ag (260), ag (268), ag (283), ag (285), ag (291), ag (305), ag (308), ag (311), ag (312), Editing mismatches: 15, all mismatches: 16, alignment length: 297, cluster length: 124, total number of As: 35 Locations in RNA: 190 206 208 210 212 243 260 268 283 285 291 305 308 311 312 Locations in genome: 1841797 1841781 1841779 1841777 1841775 1841744 1841727 1841719 1841704 1841702 1841696 1841682 1841679 1841675 1841674 Upstream nucleotide (in genome): c c c t t a g g c t a a a c a Upstream nucleotide summary: a: 5, c: 5, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g c t t a g g c t g c a t a a Downstream nucleotide summary: a: 4, c: 3, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 1, ca: 1, cc: 1, cg: 1, ct: 2, ga: 0, gc: 1, gg: 1, gt: 0, ta: 1, tc: 0, tg: 1, tt: 1, other: 0 >chr1:1841673-1841970 (-) aacgtgaaacctctaaggtggccactaaaatgactgaaactgcttgtataacctccacacctgtggaggaaaaaataatgacgaaaatgtaataaatctaacagaacacaggaggggagaaagaagcataaatagaaagcagaaagtcacattataaaagtacattcagggccaggcgtggtggctctcacatataatcccagcactgtgggaggctgacgtgggaagatggcttgagccaggagtctgagaccagcctgggcaacatagtgaaaccctgtccctacaaaaatacaaa >DW415436:17-313 (+) aacgtgaaacctctaaggtggccactaaaatgactgaaactgcttgtataacctccacacctgtggaggaaaaaataatgacgaaaatgtaataaatctaacagaacacaggaggggagaaagaagcataaatagaaagcagaaagtcacattataaaagtacattcagggccgggcgtggtggctctcgcgtgtgatcccagcactgtgggaggctgacgtgggaggatggcttgagccagcggtctgaggccagcctgggcaacgtggtgaagccctgtccctacagaagt-cgga End editing Edited EST: DW419999, type: ag Aligns to: chr1:16680515-16680803 (-+) All mismatches: ag (14), ag (85), ag (152), ag (158), ag (159), ag (161), ag (166), ag (167), ag (170), ag (178), ag (196), ag (197), ag (202), ag (206), ag (223), ag (228), ag (229), ag (237), ag (238), ag (242), ag (252), ag (258), gc (268), Editing mismatches: 22, all mismatches: 23, alignment length: 289, cluster length: 245, total number of As: 62 Locations in RNA: 14 85 152 158 159 161 166 167 170 178 196 197 202 206 223 228 229 237 238 242 252 258 Locations in genome: 16680803 16680732 16680665 16680659 16680658 16680656 16680651 16680650 16680647 16680639 16680621 16680620 16680615 16680611 16680594 16680589 16680588 16680580 16680579 16680575 16680565 16680559 Upstream nucleotide (in genome): n c t a a t a a t c t a c t c g a g a c a c Upstream nucleotide summary: a: 8, c: 6, g: 2, t: 5, other: 1 Downstream nucleotide (in genome): g g c a t c a t g c a t g c g a t a c g g g Downstream nucleotide summary: a: 5, c: 5, g: 8, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 4, ca: 0, cc: 1, cg: 5, ct: 0, ga: 2, gc: 0, gg: 0, gt: 0, ta: 1, tc: 3, tg: 1, tt: 0, other: 1 >chr1:16680515-16680803 (-) aggccaggcgccgtggctcacacctgtaatcccagaactttggaaggccgaggtgagtggatcacgagttcaggagtttgagaccagcctgtccaagatggtgaaaccccgtattttctactgaattttgtattttctactgaaaatacaaaaattagctgggcacggtggcgggcgcctgtaatcccagctactcgggaggctgaggcaggagaatcggttgaacccaggaggcggaagttgcagtgagcggagatggtgccactgcactctagtctgggcgacagag >DW419999:14-302 (+) gggccaggcgccgtggctcacacctgtaatcccagaactttggaaggccgaggtgagtggatcacgagttcgggagtttgagaccagcctgtccaagatggtgaaaccccgtattttctactgaattttgtattttctgctgaaggtgcaaaggttggctgggcgcggtggcgggcgcctgtggtcccggctgctcgggaggctgaggcgggagggtcggttgggcccgggaggcggaggttgcggtgagcggacatggtgccactgcactctagtctgggcgacagag End editing Edited EST: DW420863, type: ag Aligns to: chr1:46591573-46591855 (-+) All mismatches: ag (81), ag (167), ag (168), ag (173), ag (176), ag (211), ag (222), ag (235), ag (237), ag (243), ag (245), tc (249), ag (250), ag (263), ag (265), ag (268), ag (271), ag (275), Editing mismatches: 17, all mismatches: 18, alignment length: 283, cluster length: 195, total number of As: 57 Locations in RNA: 81 167 168 173 176 211 222 235 237 243 245 250 263 265 268 271 275 Locations in genome: 46591791 46591705 46591704 46591699 46591696 46591661 46591650 46591637 46591635 46591629 46591627 46591622 46591609 46591607 46591604 46591601 46591597 Upstream nucleotide (in genome): t t a c c c g a c g a t a t a a t Upstream nucleotide summary: a: 6, c: 4, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): c a t g c g c c t a c t t c a g g Downstream nucleotide summary: a: 3, c: 6, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 2, ca: 0, cc: 1, cg: 2, ct: 1, ga: 1, gc: 1, gg: 0, gt: 0, ta: 1, tc: 2, tg: 1, tt: 1, other: 0 >chr1:46591573-46591855 (-) ggaaaacacccctgtacagttataagagaatgagagtgaaaatggccaatagtatcttagtgatactatgaaaatagttctgacctcttggaccctctgaagggtcttagaaactctagattgcggcaaagcgcggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcggattacgaggtcaggagatcgagaccatcctggctaacatggtgaaaccctatctctactaaaaatacaaaaagttagctgggtgtggtggcgggcgcctg >DW420863:17-299 (+) ggaaaacacccctgtacagttataagagaatgagagtgaaaatggccaatagtatcttagtgatgctatgaaaatagttctgacctcttggaccctctgaagggtcttagaaactctagattgcggcaaagcgcggtggctcatgcctgtggtcccggcgctttgggaggccgaggcaggcggattacgaggtcgggagatcgaggccatcctggctagcgtggtggagccccgtctctactaaaagtgcagaaggttggctgggtgtggtggcgggcgcctg End editing Edited EST: DW422104, type: ag Aligns to: chr1:235332996-235333272 (-+) All mismatches: ag (52), ag (57), ag (66), ag (70), ag (85), ag (108), ag (109), ag (117), ag (118), ag (119), ag (139), ag (142), ag (148), ca (155), ag (174), ag (175), ag (188), ag (205), ag (220), ag (227), ag (228), Editing mismatches: 20, all mismatches: 21, alignment length: 277, cluster length: 177, total number of As: 59 Locations in RNA: 52 57 66 70 85 108 109 117 118 119 139 142 148 174 175 188 205 220 227 228 Locations in genome: 235333237 235333232 235333223 235333219 235333204 235333181 235333180 235333172 235333171 235333170 235333150 235333147 235333141 235333115 235333114 235333101 235333084 235333069 235333062 235333061 Upstream nucleotide (in genome): t a c c c c a g a a t a t t a c a c c a Upstream nucleotide summary: a: 8, c: 7, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g g g g g a c a a c g a g a t g a g a a Downstream nucleotide summary: a: 8, c: 2, g: 9, t: 1, other: 0 Dinucleotide summary: aa: 4, ac: 2, ag: 1, at: 1, ca: 2, cc: 0, cg: 5, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 3, tt: 0, other: 0 >chr1:235332996-235333272 (-) gggcgcaattgctcacgcctgtaattccagcacttagggaagccaaggcaggcagatcacctgaggtcaggagttcgagaccagactggccaacatgacgaaaccccatctctactaaaaatagaaacattagccggacatggtggcgcatgcctgtaatcccagatactcaggaggctgagacaggaaaattgcttgaacccaggaggcaaaggttgcagtgagctgagattgcactgctgcagtccagcctgggcaacagagcaagacccccatc >DW422104:17-293 (+) gggcgcaattgctcacgcctgtaattccagcacttggggaggccaaggcgggcggatcacctgaggtcgggagttcgagaccagactggccggcatgacggggccccatctctactaaaaatggagacattggccggaaatggtggcgcatgcctgtggtcccagatactcgggaggctgagacaggagaattgcttgaacccgggaggcggaggttgcagtgagctgagattgcactgctgcagtccagcctgggcaacagagcaagacccccatc End editing Edited EST: DW423381, type: ag Aligns to: chr1:155213386-155213662 (-+) All mismatches: ag (22), ag (25), ag (43), ag (47), ag (67), ag (79), ag (134), ag (150), ag (209), ag (210), ag (219), ag (223), ag (226), ag (227), ag (243), ag (249), ag (258), ag (262), ag (282), ag (284), ag (290), Editing mismatches: 21, all mismatches: 21, alignment length: 277, cluster length: 269, total number of As: 84 Locations in RNA: 22 25 43 47 67 79 134 150 209 210 219 223 226 227 243 249 258 262 282 284 290 Locations in genome: 155213656 155213653 155213635 155213631 155213611 155213599 155213544 155213528 155213469 155213468 155213459 155213455 155213452 155213451 155213435 155213429 155213420 155213416 155213396 155213394 155213388 Upstream nucleotide (in genome): t g a g c c c a c a a c t a a t t c t t c Upstream nucleotide summary: a: 6, c: 7, g: 2, t: 6, other: 0 Downstream nucleotide (in genome): g g c g g g g t a c c g a g a c g g t g g Downstream nucleotide summary: a: 3, c: 4, g: 12, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 1, at: 1, ca: 1, cc: 0, cg: 6, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 1, tg: 3, tt: 1, other: 0 >chr1:155213386-155213662 (-) gaacctaggaggcggaggttgcagtgaaccgagatcgtgccactgcactccagcctgggtgacagagatactccgtctcaaaaaaaaaaacaaaacaaaaaacaagcggactgggcgcagtgcctcaccctgtaatcccagcactttgcaaagccaaggcgggaggatcctttgagtttaggagtttgagaccaacctgcgcaacacagtaagaccccgtctctacaaaaaatacagaaattagccaggtgtggtggtgtgcgcctatagtcccagc >DW423381:16-292 (+) gaacctggggggcggaggttgcagtgagccgggatcgtgccactgcactccggcctgggtgacggagatactccgtctcaaaaaaaaaaacaaaacaaaaaacaagcggactgggcgcggtgcctcaccctgtagtcccagcactttgcaaagccaaggcgggaggatcctttgagtttaggagtttgagaccggcctgcgcagcacggtgggaccccgtctctacagaaaatgcagaaattggccgggtgtggtggtgtgcgcctgtggtcccggc End editing Edited EST: DW424148, type: ag Aligns to: chr1:201442986-201443259 (-+) All mismatches: ag (16), ag (78), ta (90), ag (104), ag (121), ag (149), ag (171), ag (175), ag (185), ag (211), ag (234), ag (238), ag (244), ag (257), ag (264), Editing mismatches: 14, all mismatches: 15, alignment length: 274, cluster length: 249, total number of As: 69 Locations in RNA: 16 78 104 121 149 171 175 185 211 234 238 244 257 264 Locations in genome: 201443259 201443197 201443171 201443154 201443126 201443104 201443100 201443090 201443064 201443041 201443037 201443031 201443018 201443011 Upstream nucleotide (in genome): n a c c c a t t t g c a c c Upstream nucleotide summary: a: 3, c: 6, g: 1, t: 3, other: 1 Downstream nucleotide (in genome): g t g g g a c g g g g t g g Downstream nucleotide summary: a: 1, c: 1, g: 10, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 6, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 1 >chr1:201442986-201443259 (-) aggtgctggagccacaggggtaaaaaaaacagataggctggacgcggtggctgacgcctgtaatcccagcactttgggaggccgaggcaggcggatcacgaggtcaggagattggaaccatcctggctaacacagtgaaaccccgtctgtactaaaaatacaaaaagttagccgggcatggtggcgggcgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccaggaggcagagcttgcagtgagctgagatcgcg >DW424148:16-289 (+) gggtgctggagccacaggggtaaaaaaaacagataggctggacgcggtggctgacgcctgtagtcccagcacttagggaggccgaggcgggcggatcacgaggtcgggagattggaaccatcctggctaacacggtgaaaccccgtctgtactaagaatgcaaaaagttggccgggcatggtggcgggcgcctgtggtcccagctactcaggaggctggggcgggagagtggcgtgaacccgggaggcggagcttgcagtgagctgagatcgcg End editing Edited EST: DW426722, type: ag Aligns to: chr1:41651377-41651641 (-+) All mismatches: ag (16), ag (94), ag (105), ag (109), ag (110), ag (182), ag (212), ag (213), ag (218), ag (222), ag (239), ag (242), ag (254), ag (277), ag (278), Editing mismatches: 15, all mismatches: 15, alignment length: 266, cluster length: 262, total number of As: 73 Locations in RNA: 16 94 105 109 110 182 212 213 218 222 239 242 254 277 278 Locations in genome: 41651641 41651563 41651552 41651548 41651547 41651476 41651446 41651445 41651440 41651436 41651419 41651416 41651404 41651381 41651380 Upstream nucleotide (in genome): n a a c a a t a c t c g a t a Upstream nucleotide summary: a: 7, c: 3, g: 1, t: 3, other: 1 Downstream nucleotide (in genome): g c g a g a a t g c g g c a g Downstream nucleotide summary: a: 4, c: 3, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 3, at: 1, ca: 1, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 1 >chr1:41651377-41651641 (-) agattgggagaggaggtctgaagttttgctttttaaatacttaaaaatatttctcggtggctcatgcctgtaattccaacactctgggaagccaaggtgggcggatcacctgaagtcaggagttcgagaccaacatggagaaaccccatttctactaaaaata-caaaactggtgggcatggtggcgcat-gcctgtaatcccagctacttgggaggctgagacaggagaattgcttgaacccgggaggcggaggttgctgtaagcc >DW426722:16-281 (+) ggattgggagaggaggtctgaagttttgctttttaaatacttaaaaatatttctcggtggctcatgcctgtaattccagcactctgggaggccggggtgggcggatcacctgaagtcaggagttcgagaccaacatggagaaaccccatttctactaaaaataacagaactggtgggcatggtggcgcattgc-tgtggtcccggctgcttgggaggctgagacgggggaattgcttgagcccgggaggcggaggttgctgtgggcc End editing Edited EST: DW426819, type: ag Aligns to: chr1:115024510-115024774 (-+) All mismatches: ag (135), ag (136), ag (141), ag (166), ag (177), ag (189), ag (190), ag (232), ag (235), ag (246), ag (254), ag (273), ag (278), Editing mismatches: 13, all mismatches: 13, alignment length: 265, cluster length: 144, total number of As: 43 Locations in RNA: 135 136 141 166 177 189 190 232 235 246 254 273 278 Locations in genome: 115024656 115024655 115024650 115024625 115024614 115024602 115024601 115024559 115024556 115024545 115024537 115024518 115024513 Upstream nucleotide (in genome): t a c c a c a a t t c a c Upstream nucleotide summary: a: 5, c: 5, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): a t g g g a g a c g t c g Downstream nucleotide summary: a: 3, c: 2, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 1, ca: 1, cc: 0, cg: 3, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr1:115024510-115024774 (-) cactgttgtcacatttcaggtattcagtaatcatgtgtggctgatggctgccatattagacagtgcagatatagaacattttgtcatggcagaaagttttgttggactaatggcctgtaatcccagctctttgggaggccgaggtgggcagatcacctgaagtcaggagttcaagaccagccgcgccaacatggtgaaaccccatctctactaaaaatacaaaaatattagctgggcatggtggcgcacatctgtaacctcagct >DW426819:17-281 (+) cactgttgtcacatttcaggtattcagtaatcatgtgtggctgatggctgccatattagacagtgcagatatagaacattttgtcatggcagaaagttttgttggactaatggcctgtggtcccggctctttgggaggccgaggtgggcggatcacctgaggtcaggagttcgggaccagccgcgccaacatggtgaaaccccatctctactaaagatgcaaaaatattggctgggcgtggtggcgcacatctgtagcctcggct End editing Edited EST: DW426979, type: ag Aligns to: chr1:15825265-15825527 (-+) All mismatches: ag (16), ag (69), ag (77), ag (90), ag (91), ag (93), ag (96), ag (105), ag (106), ag (108), ag (110), ag (163), ag (209), tc (259), Editing mismatches: 13, all mismatches: 14, alignment length: 263, cluster length: 194, total number of As: 48 Locations in RNA: 16 69 77 90 91 93 96 105 106 108 110 163 209 Locations in genome: 15825527 15825474 15825466 15825453 15825452 15825450 15825447 15825438 15825437 15825435 15825433 15825380 15825334 Upstream nucleotide (in genome): n c g c a g c t a c c t c Upstream nucleotide summary: a: 2, c: 6, g: 2, t: 2, other: 1 Downstream nucleotide (in genome): g g g a g c t a c c g g g Downstream nucleotide summary: a: 2, c: 3, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 1, cc: 1, cg: 3, ct: 1, ga: 0, gc: 1, gg: 1, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 1 >chr1:15825265-15825527 (-) aggggcggtggctcacgcctgtcatcccagcactttgggaggctgaggcgggcagatcacgaggtcaggagatcaagaccatcctggctaacacagtgaagccccatctctacaaataattagccaggtgtggtggcacacgcctgtagtcccagctacttgggaggctgagacaggagaatcgcttgaacccaggaggcgaagcttgcagtgagccatcgcgccactgcattccagcctggatgacagagcgagactctgtc >DW426979:16-278 (+) gggggcggtggctcacgcctgtcatcccagcactttgggaggctgaggcgggcggatcacggggtcaggagatcggggccgtcctggctggcgcggtgaagccccatctctacaaataattagccaggtgtggtggcacacgcctgtggtcccagctacttgggaggctgagacaggagaatcgcttgaacccgggaggcgaagcttgcagtgagccatcgcgccactgcattccagcctggacgacagagcgagactctgtc End editing Edited EST: DW427740, type: ag Aligns to: chr1:228326890-228327151 (-+) All mismatches: ag (42), ag (63), ag (80), ag (143), ag (146), ag (163), ag (172), ag (191), ag (197), ag (201), ag (202), ag (206), ag (209), ag (223), ag (224), ag (225), ag (237), ga (260), Editing mismatches: 17, all mismatches: 18, alignment length: 262, cluster length: 196, total number of As: 41 Locations in RNA: 42 63 80 143 146 163 172 191 197 201 202 206 209 223 224 225 237 Locations in genome: 228327126 228327105 228327088 228327025 228327022 228327005 228326996 228326977 228326971 228326967 228326966 228326962 228326959 228326945 228326944 228326943 228326931 Upstream nucleotide (in genome): c a c t t c c t c t a c c c a a t Upstream nucleotide summary: a: 4, c: 8, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): a g g g g t g a g a t c a a a g c Downstream nucleotide summary: a: 6, c: 2, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 1, ca: 3, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 2, tt: 0, other: 0 >chr1:228326890-228327151 (-) cagtgacgccatctctgctcactgcaacctgggcctcctaggttcaagcgattctcctgcctcagcctcccgagtagctgggattacaggcgcccgccaccacgcccagctaatttttgtatttttagtagagacagggtttcaccatgttggccaggctggtcttgaactcctaacctcaggtaatccaccaaccttggcctcccaaagtgctgggattacaggcgtgagccactgcacctggccacgggactctatttct >DW427740:17-278 (+) cagtgacgccatctctgctcactgcgacctgggcctcctaggttcaggcgattctcctgcctcggcctcccgagtagctgggattacaggcgcccgccaccacgcccagctaatttttgtatttttggtggagacagggtttcaccgtgttggccgggctggtcttgaactcctgacctcgggtggtccgccgaccttggcctcccggggtgctgggattgcaggcgtgagccactgcacctgaccacgggactctatttct End editing Edited EST: DW431203, type: ag Aligns to: chr1:21412264-21412519 (-+) All mismatches: ag (15), ag (16), ag (54), ag (76), ag (77), ag (98), ag (99), ag (103), ag (120), ag (159), ag (168), ag (169), ag (171), ac (176), ag (179), ag (209), ag (215), ag (236), ag (249), ag (250), ag (255), gc (259), ag (262), Editing mismatches: 21, all mismatches: 23, alignment length: 256, cluster length: 248, total number of As: 75 Locations in RNA: 15 16 54 76 77 98 99 103 120 159 168 169 171 179 209 215 236 249 250 255 262 Locations in genome: 21412519 21412518 21412480 21412458 21412457 21412436 21412435 21412431 21412414 21412375 21412366 21412365 21412363 21412355 21412325 21412319 21412298 21412285 21412284 21412279 21412272 Upstream nucleotide (in genome): n a c t a c a c c c t a a a t c c t a c c Upstream nucleotide summary: a: 7, c: 9, g: 0, t: 4, other: 1 Downstream nucleotide (in genome): a c g a t a g g g t a a a a g g g a a g g Downstream nucleotide summary: a: 9, c: 1, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 1, at: 1, ca: 1, cc: 0, cg: 7, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 3, tc: 0, tg: 1, tt: 0, other: 1 >chr1:21412264-21412519 (-) aacattttgaataacactttgaaaaataacctttgggccaggcgcgatggcttactcctgtaatcccagcactttgggagaccaaggcagacggatcacgaggtcaggagattgagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggtgtggtggcgtgaacctgtagtcccagctattcgggagactgaggcaggagaattgcttaaatccaggaggcagaggttgc >DW431203:15-270 (+) ggcattttgaataacactttgaaaaataacctttgggccgggcgcgatggcttactcctgtggtcccagcactttgggagaccggggcggacggatcacgaggtcgggagattgagaccatcctggccaacatggtgaaaccccgtctctactggagataccaagattagccgggtgtggtggcgtgaacctgtggtcccggctattcgggagactgaggcgggagaattgcttggatccgggacgcggaggttgc End editing Edited EST: DW436016, type: ag Aligns to: chr1:150577557-150577797 (-+) All mismatches: ag (14), ag (15), ag (32), ag (37), ag (56), ag (68), ag (87), ag (96), ag (103), ag (106), ag (132), ag (138), ag (142), ag (146), ag (159), ag (173), Editing mismatches: 16, all mismatches: 16, alignment length: 240, cluster length: 161, total number of As: 45 Locations in RNA: 14 15 32 37 56 68 87 96 103 106 132 138 142 146 159 173 Locations in genome: 150577797 150577796 150577778 150577773 150577754 150577742 150577723 150577714 150577707 150577704 150577678 150577672 150577668 150577664 150577651 150577637 Upstream nucleotide (in genome): n a c g t c t t a t t c t c c g Upstream nucleotide summary: a: 2, c: 5, g: 2, t: 6, other: 1 Downstream nucleotide (in genome): a g c g g t c a t g g g c g g a Downstream nucleotide summary: a: 3, c: 3, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 0, cc: 1, cg: 3, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 3, tt: 0, other: 1 >chr1:150577557-150577797 (-) aagctgaggcgggcaggtcacctgaggttaggagttcgagactagcctggctaacatggtgaaaccccgtctctactaaaaataaaaaaaattagccaggcgcggtgacgggtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagctgagatcgcaccactgcactccagcctgggcagggggagcaaaactccatccc >DW436016:14-253 (+) ggg-tgaggcgggcaggtcgcctggggttaggagttcgagactggcctggctaacgtggtgaaaccccgtctctgctaaaaatgaaaaaagttggccaggcgcggtgacgggtgcctgtggtcccggctgctcgggaggctgaggcgggagaatcgcttggacctgggaggtggaggttgcagtgagctgagatcgcaccactgcactccagcctgggcagggggagcaaaactccatccc End editing Edited EST: DW436343, type: ag Aligns to: chr1:155397215-155397450 (-+) All mismatches: ag (38), ca (44), ag (45), ag (55), ag (73), ag (99), ag (100), ag (159), ag (169), ag (179), ag (228), ag (230), ag (244), ag (247), Editing mismatches: 13, all mismatches: 14, alignment length: 236, cluster length: 210, total number of As: 60 Locations in RNA: 38 45 55 73 99 100 159 169 179 228 230 244 247 Locations in genome: 155397429 155397422 155397412 155397394 155397368 155397367 155397308 155397298 155397288 155397239 155397237 155397223 155397220 Upstream nucleotide (in genome): t c t t t a c a a t t c g Upstream nucleotide summary: a: 3, c: 3, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): g c c g a t g c c t g g g Downstream nucleotide summary: a: 1, c: 4, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 1, ca: 0, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 3, tt: 1, other: 0 >chr1:155397215-155397450 (-) taagaccagcctggccaacatagtgaacacccatctctactaaaaatagaaaaattagccgggcgcagtcgctcttgcctgtaatcccagcattttgggaggccgaggtgggcggatcacctgaggtcaggaatttgagaccagcctggccaacacggcgaaaccctgtctctactaaaaagtacaaaaattagccaggtggtgggcgcctatagtcccagctactcaggagcctg >DW436343:17-252 (+) taagaccagcctggccaacatggtgaaagcccatctctgctaaaaatagaaaaattggccgggcgcagtcgctcttgcctgtggtcccagcattttgggaggccgaggtgggcggatcacctgaggtcaggaatttgagaccggcctggccagcacggcgaagccctgtctctactaaaaagtacaaaaattagccaggtggtgggcgcctgtggtcccagctactcgggggcctg End editing Edited EST: DW436537, type: ag Aligns to: chr1:38151052-38151279 (-+) All mismatches: ag (16), ag (54), ag (55), ag (58), ag (59), ag (61), ag (64), ag (65), ag (66), ag (70), ag (74), ag (78), ag (103), ag (104), ag (109), ag (113), ag (126), ag (127), ag (145), ag (158), ag (170), ag (226), ga (240), Editing mismatches: 22, all mismatches: 23, alignment length: 228, cluster length: 211, total number of As: 57 Locations in RNA: 16 54 55 58 59 61 64 65 66 70 74 78 103 104 109 113 126 127 145 158 170 226 Locations in genome: 38151278 38151240 38151239 38151236 38151235 38151233 38151230 38151229 38151228 38151224 38151220 38151216 38151191 38151190 38151185 38151181 38151168 38151167 38151149 38151136 38151124 38151068 Upstream nucleotide (in genome): g c a a a t a a a t c c t a c t g a a c g c Upstream nucleotide summary: a: 9, c: 6, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): g a a a t c a a a g g t a t g c a g c a g a Downstream nucleotide summary: a: 10, c: 3, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 5, ac: 1, ag: 1, at: 2, ca: 3, cc: 0, cg: 2, ct: 1, ga: 1, gc: 0, gg: 2, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr1:38151052-38151279 (-) gagaccagcctgggcaacatggtgaaacgccgtctctacaaaaaatacaaaaattagccaggcatggtggtatgtgcctgaagtctgtaatcccagctactcgggagggtgaagctggaggattgcttgaactgggggaggtcaaggctgcagtgagctgagatcgtgccactgcactccagcctgggtgataaagtgaaactctgtctccaaaaaaaaaaaaaagaa >DW436537:15-242 (+) gggaccagcctgggcaacatggtgaaacgccgtctctacggaaggtgcagggattggccgggcgtggtggtatgtgcctgaagtctgtggtcccggctgctcgggagggtggggctggaggattgcttgagctgggggaggtcgaggctgcagtgggctgagatcgtgccactgcactccagcctgggtgataaagtgaaactctgtctccgaaaaaaaaaaaaaaaa End editing Edited EST: DW436635, type: ag Aligns to: chr1:200621796-200621996 (-+) All mismatches: ag (28), ag (30), ag (36), ag (37), ag (40), ag (84), ag (88), ag (92), ag (108), ag (119), ag (131), ag (134), ag (144), ag (148), ct (176), ag (185), ag (186), ag (199), ag (200), Editing mismatches: 18, all mismatches: 19, alignment length: 203, cluster length: 172, total number of As: 43 Locations in RNA: 28 30 36 37 40 84 88 92 108 119 131 134 144 148 185 186 199 200 Locations in genome: 200621985 200621983 200621977 200621976 200621973 200621929 200621925 200621921 200621905 200621894 200621882 200621879 200621869 200621865 200621828 200621827 200621815 200621814 Upstream nucleotide (in genome): a t a a t c t c g g c a g c c a c a Upstream nucleotide summary: a: 6, c: 6, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): t c a t g g c g g g g g g t a g a a Downstream nucleotide summary: a: 4, c: 2, g: 9, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 2, at: 2, ca: 2, cc: 0, cg: 3, ct: 1, ga: 0, gc: 0, gg: 3, gt: 0, ta: 0, tc: 2, tg: 1, tt: 0, other: 0 >chr1:200621796-200621996 (-) tgcaaaaaaaaataccaaaaattagccgggcacggtggcacatgcctgtggtcacacctgtggtcccagctactcaggaggctgaggcaggaggatcacttgagcccaggaggcagaagttgcagtgagccatgattgcacccctgcactccagcctggcgacagagcaagaccctgtctc-aa-aaaaaaaaaaaaaaaaaa >DW436635:17-219 (+) tgcaaaaaaaagtgccaaaggttggccgggcacggtggcacatgcctgtggtcacacctgtggtcccggctgctcgggaggctgaggcagggggatcacttgggcccaggaggcggaggttgcagtgggccgtgattgcacccctgcactccagcctggtgacagagcgggaccctgtctccggcaaaaaaaaaaaaaaaaaa End editing Edited EST: DW463135, type: ag Aligns to: chr1:155397107-155397450 (-+) All mismatches: ag (38), ca (44), ag (45), ag (55), ag (73), ag (99), ag (100), ag (159), ag (169), ag (179), ag (228), ag (230), ag (244), ag (247), ag (253), ag (279), ag (333), ag (334), Editing mismatches: 17, all mismatches: 18, alignment length: 344, cluster length: 297, total number of As: 78 Locations in RNA: 38 45 55 73 99 100 159 169 179 228 230 244 247 253 279 333 334 Locations in genome: 155397429 155397422 155397412 155397394 155397368 155397367 155397308 155397298 155397288 155397239 155397237 155397223 155397220 155397214 155397188 155397134 155397133 Upstream nucleotide (in genome): t c t t t a c a a t t c g g g c a Upstream nucleotide summary: a: 4, c: 4, g: 3, t: 6, other: 0 Downstream nucleotide (in genome): g c c g a t g c c t g g g g g a g Downstream nucleotide summary: a: 2, c: 4, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 1, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 3, gt: 0, ta: 1, tc: 1, tg: 3, tt: 1, other: 0 >chr1:155397107-155397450 (-) taagaccagcctggccaacatagtgaacacccatctctactaaaaatagaaaaattagccgggcgcagtcgctcttgcctgtaatcccagcattttgggaggccgaggtgggcggatcacctgaggtcaggaatttgagaccagcctggccaacacggcgaaaccctgtctctactaaaaagtacaaaaattagccaggtggtgggcgcctatagtcccagctactcaggagcctgaggcaggacaatcgcttggacccgggaggcggaggttgcagtgagccgggatctggccactgcactccagcctgggcaacaagagcgggactccatctcaaaaaaaaa >DW463135:17-360 (+) taagaccagcctggccaacatggtgaaagcccatctctgctaaaaatagaaaaattggccgggcgcagtcgctcttgcctgtggtcccagcattttgggaggccgaggtgggcggatcacctgaggtcaggaatttgagaccggcctggccagcacggcgaagccctgtctctactaaaaagtacaaaaattagccaggtggtgggcgcctgtggtcccagctactcgggggcctggggcaggacaatcgcttggacccggggggcggaggttgcagtgagccgggatctggccactgcactccagcctgggcaacgggagcgggactccatctcaaaaaaaaa End editing Edited EST: BI546613, type: ag Aligns to: chr1:151423786-151424380 (-+) All mismatches: ga (9), ag (28), ag (33), ag (37), ag (55), ag (303), ag (310), ag (315), ag (326), ag (350), ag (355), ag (363), ag (369), ag (381), ag (394), ag (400), ag (403), ag (404), ag (405), ag (412), ag (421), ag (425), ag (430), ag (431), ag (443), ag (444), ag (458), ag (467), ag (470), ag (471), ag (489), ag (509), Editing mismatches: 31, all mismatches: 32, alignment length: 595, cluster length: 482, total number of As: 125 Locations in RNA: 28 33 37 55 303 310 315 326 350 355 363 369 381 394 400 403 404 405 412 421 425 430 431 443 444 458 467 470 471 489 509 Locations in genome: 151424356 151424351 151424347 151424329 151424081 151424074 151424069 151424058 151424034 151424029 151424021 151424015 151424003 151423990 151423984 151423981 151423980 151423979 151423972 151423963 151423959 151423954 151423953 151423941 151423940 151423926 151423917 151423914 151423913 151423895 151423875 Upstream nucleotide (in genome): g g c a c a c g g c g c c c t t a a a c c t a t a g a c a c g Upstream nucleotide summary: a: 9, c: 11, g: 7, t: 4, other: 0 Downstream nucleotide (in genome): g t c a c t g g g g a g t t c a a a a g t a c a t g g a g g g Downstream nucleotide summary: a: 9, c: 4, g: 12, t: 6, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 2, at: 2, ca: 1, cc: 2, cg: 5, ct: 3, ga: 1, gc: 0, gg: 5, gt: 1, ta: 3, tc: 1, tg: 0, tt: 0, other: 0 >chr1:151423786-151424380 (-) ggctggtctcgaactcctgatctgaggtgatccacctgccttggcctcccaaagtgctgggattacaggcgtgagccaccgcgtccagccgaacattgacatttttaaagagacttctattagttttatagaatgttccatattctgcatttgattatttccttctagaatgtcccaccttctggatttatctcattatttctttgtggtgatacttaatttgttcttttattgctgtatttcttgtaaacgcaaagttacatttaaataatggatttgggccaggcgcggtgcctcacacctgtaatcccagcactttgggagactgaggcgggtggatcacctgaggtcaggagttgaagaccagcctgaccaacatgatgaaaccccatctctactaaaagtacaaaatgagccaggcatggtaacgcatgcctgtaattacagctccttgagaggctgaagcaagagaatcgcttgcacccaggaggtgaaggttgcagtgagctgagatcgcgccattgggctccagcctgggcaacaagagtgaaactccatctcaaaaaatttaaaaaa-aaataaaataaataaataa >BI546613:4-598 (+) ggctgatctcgaactcctgatctggggtggtccgcctgccttggcctcccagagtgctgggattacaggcgtgagccaccgcgtccagccgaacattgacatttttaaagagacttctattagttttatagaatgttccatattctgcatttgattatttccttctagaatgtcccaccttctggatttatctcattatttctttgtggtgatacttaatttgttcttttattgctgtatttcttgtaaacgcaaagttacatttaaataatggatttgggccaggcgcggtgcctcacgcctgtagtcccggcactttgggggactgaggcgggtggatcacctggggtcgggagttggagaccggcctgaccaacgtgatgaaaccccgtctctgctgggagtacagaatgagccgggcgtggtggcgcatgcctgtggttacagctccttgggaggctgaggcgggagaatcgcttgcacccgggaggtgaaggttgcagtgggctgagatcgcgccattgggctccagcctgggcaacaagagtgaaactccatctcaaaaaatt-aaaaaataaataaaataaataaataa End editing Edited EST: BQ705923, type: ag Aligns to: chr1:51824382-51824683 (-+) All mismatches: ag (34), ag (104), ag (114), ag (139), ag (140), ag (143), ag (151), ag (161), ag (169), ag (170), ag (179), ag (202), ag (206), ag (207), ag (219), Editing mismatches: 15, all mismatches: 15, alignment length: 301, cluster length: 186, total number of As: 52 Locations in RNA: 34 104 114 139 140 143 151 161 169 170 179 202 206 207 219 Locations in genome: 51824649 51824579 51824569 51824544 51824543 51824540 51824532 51824522 51824514 51824513 51824504 51824481 51824477 51824476 51824464 Upstream nucleotide (in genome): t a a a a t c c t a t c t a c Upstream nucleotide summary: a: 6, c: 4, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): a c c a t g t t a t g c a g g Downstream nucleotide summary: a: 4, c: 3, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 2, ca: 0, cc: 1, cg: 1, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 3, tc: 0, tg: 2, tt: 0, other: 0 >chr1:51824382-51824683 (-) cttgttggggccagacggggtggctcacacctgtaatcccagcactttggaaggccgaagcgggcggatcacttgaggtcaggagtgtgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccaggcatggtggcgcatgcctgtaatcccagctagggaggctgaggtgggaggatcacttaagccccagaggcagaggttgcgggagctgatatagtgccactgtcctcaagctgagttacagagcgagactccgcctcaaaaaaaaaaaaaaaaa >BQ705923:1-301 (+) cttgttggggccagacggggtggctc-cacctgtgatcccagcactttggaaggccgaagcgggcggatcacttgaggtcaggagtgtgagaccagcctggccagcatggtgaagccccgtctctactaaaaatacaaaggttggccaggcgtggtggcgcgtgcctgtggtcccagctggggaggctgaggtgggaggatcgcttgggccccagaggcggaggttgcgggagctgatatagtgccactgtcctcaagctgagttacagagcgagactccgcctcaaaaaaaaaaaaaaaaa End editing Edited EST: BQ712695, type: ag Aligns to: chr1:51824382-51824683 (-+) All mismatches: ag (35), ag (105), ag (115), ag (140), ag (141), ag (144), ag (152), ag (162), ag (170), ag (171), ag (180), ag (203), ag (207), ag (208), ag (220), Editing mismatches: 15, all mismatches: 15, alignment length: 302, cluster length: 186, total number of As: 52 Locations in RNA: 35 105 115 140 141 144 152 162 170 171 180 203 207 208 220 Locations in genome: 51824649 51824579 51824569 51824544 51824543 51824540 51824532 51824522 51824514 51824513 51824504 51824481 51824477 51824476 51824464 Upstream nucleotide (in genome): t a a a a t c c t a t c t a c Upstream nucleotide summary: a: 6, c: 4, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): a c c a t g t t a t g c a g g Downstream nucleotide summary: a: 4, c: 3, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 2, ca: 0, cc: 1, cg: 1, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 3, tc: 0, tg: 2, tt: 0, other: 0 >chr1:51824382-51824683 (-) cttgttggggccagacggggtggctcacacctgtaatcccagcactttggaaggccgaagcgggcggatcacttgaggtcaggagtgtgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccaggcatggtggcgcatgcctgtaatcccagctagggaggctgaggtgggaggatcacttaagccccagaggcagaggttgcgggagctgatatagtgccactgtcctcaagctgagttacagagcgagactccgcctcaaaaaaaaaaaaaaaaa >BQ712695:1-302 (+) cttgttggggccagacggggtggctcacacctgtgatcccagcactttggaaggccgaagcgggcggatcacttgaggtcaggagtgtgagaccagcctggccagcatggtgaagccccgtctctactaaaaatacaaaggttggccaggcgtggtggcgcgtgcctgtggtcccagctggggaggctgaggtgggaggatcgcttgggccccagaggcggaggttgcgggagctgatatagtgccactgtcctcaagctgagttacagagcgagactccgcctcaaaaaaaaaaaaaaaaa End editing Edited EST: CB266040, type: ag Aligns to: chr1:173766180-173766733 (-+) All mismatches: ag (397), ag (410), ag (413), ag (449), ag (450), ag (452), ag (475), ag (478), ag (483), ag (490), ag (531), ag (533), Editing mismatches: 12, all mismatches: 12, alignment length: 552, cluster length: 138, total number of As: 38 Locations in RNA: 397 410 413 449 450 452 475 478 483 490 531 533 Locations in genome: 173766336 173766323 173766320 173766284 173766283 173766281 173766258 173766255 173766250 173766243 173766201 173766199 Upstream nucleotide (in genome): t c a a a c a t g c t g Upstream nucleotide summary: a: 4, c: 3, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g c t a c a g g g g g g Downstream nucleotide summary: a: 2, c: 2, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 1, ca: 1, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 0, tg: 3, tt: 0, other: 0 >chr1:173766180-173766733 (-) ctgttatgtgaaagagcaatgtatgtggacagaatgtagagtattgtactttttatgtaaggaatgagggagatatgagtgtatttccttatgctttcaaaaaacaatgaaaggataaaccacaaacttataactgtatttacttatagggagaaggaaggaacagagtagaggggacaggaatgaaagttaagatttacctgaatgttcctttttaatagtttagaaccatgtaagtgttttgtataattatgaaagaaaattagaacaaaaggaaaaaacaaagcaatccttagcaattaaaaaaaaatgagcctaactgtattaagttcatggcataatcacacaagtttttttattcttttttgagacacggtcttgctctgttgtccaggctagagtgcagtggcacaatcacagttcactgcagccttgacctccctggcccaaacaatcctccaaactcagccttccaagtagctgagaccacaggcatattgccaccaagcctggctaattttttaatttttgtagagatgaggtctccctatgtt >CB266040:1-552 (+) ctgttatgtgaaagagcaatgtatgtggacagaatgtagagtattgtactttttatgtaaggaatgagggagatatgagtgtatttccttatgctttcaaaaaacaatgaaaggataaaccacaaacttataactgtatttacttatagggagaaggaaggaacagagtagaggggacaggaatgaaagttaagatttacctgaatgttcctttttaatagtttagaaccatgtaagtgttttgtataattatgaaagaaaattagaacaaaaggaaaaaacaaagcaatccttagcaattaaaaaaaaatgagcctaactgtattaagttcatggcataatcacacaagtttttttattcttttttgagacacggtcttgct-tgttgtccaggctggagtgcagtggcgcagtcacagttcactgcagccttgacctccctggcccaggcgatcctccaaactcagccttccaggtggctgggaccacgggcatattgcc-ccaagcctggctaattttttaatttttgtggggatgaggtctccctatgtt End editing Edited EST: AW239006, type: ga Aligns to: chr1:152005037-152005301 (-+) All mismatches: ga (194), ga (201), ga (231), ga (235), ga (258), ga (276), ga (300), ga (304), ga (320), ga (321), ga (326), ga (328), ga (337), ga (338), ga (343), ga (344), ga (380), ga (410), Editing mismatches: 18, all mismatches: 18, alignment length: 265, cluster length: 217, total number of Gs: 41 Locations in RNA: 194 201 231 235 258 276 300 304 320 321 326 328 337 338 343 344 380 410 Locations in genome: 152005271 152005264 152005234 152005230 152005207 152005189 152005165 152005161 152005145 152005144 152005139 152005137 152005128 152005127 152005122 152005121 152005085 152005055 Upstream nucleotide (in genome): c t a a t t a t c g t a t g t g t t Upstream nucleotide summary: a: 4, c: 2, g: 3, t: 9, other: 0 Downstream nucleotide (in genome): c a c a a g g t g a a g g c g c t a Downstream nucleotide summary: a: 6, c: 4, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 0, ca: 0, cc: 1, cg: 1, ct: 0, ga: 1, gc: 2, gg: 0, gt: 0, ta: 4, tc: 0, tg: 3, tt: 2, other: 0 >chr1:152005037-152005301 (-) agaaccagaaggaccctggtgtccttgaccgcatgatgaagaaactggacaccaacagtgatggtcagctagatttctcagaatttcttaatctgattggtggcctagctatggcttgccatgactccttcctcaaggctgtcccttcccagaagcggacctgaggaccccttggccctggccttcaaacccaccccctttccttccagcctttctgtcatcatctccacagcccacccatcccctgagcacactaaccacctca >AW239006:164-428 (+) agaaccagaaggaccctgntgtccttgaccacatgataaagaaactggacaccaacagtgatggtcaactaaatttctcagaatttcttaatctaattggtggcctagctatagcttgccatgactccttcctcaaagctatcccttcccagaancaaacctaaagaccccttaaccctaaccttcaaacccaccccctttccttccagcctttctatcatcatctccacagcccacccatcccctaagcacactaaccacctca End editing Edited EST: AA493823, type: ag Aligns to: chr1:20973622-20973982 (-+) All mismatches: ag (14), ag (40), ag (67), ag (73), ag (101), ag (106), ag (111), ag (120), ag (134), ag (137), ag (143), ag (190), ag (193), ct (203), ag (206), ag (234), ag (244), ag (259), ag (262), ag (264), ag (266), ag (271), ag (272), ga (276), ag (301), ag (311), ag (325), ag (342), ag (343), ag (367), Editing mismatches: 28, all mismatches: 30, alignment length: 361, cluster length: 354, total number of As: 107 Locations in RNA: 14 40 67 73 101 106 111 120 134 137 143 190 193 206 234 244 259 262 264 266 271 272 301 311 325 342 343 367 Locations in genome: 20973975 20973949 20973922 20973916 20973888 20973883 20973878 20973869 20973855 20973852 20973846 20973799 20973796 20973783 20973755 20973745 20973730 20973727 20973725 20973723 20973718 20973717 20973688 20973678 20973664 20973647 20973646 20973622 Upstream nucleotide (in genome): a c a a c g c g c c a a c a a a a a t c a a t t a g a g Upstream nucleotide summary: a: 14, c: 7, g: 4, t: 3, other: 0 Downstream nucleotide (in genome): a g t c c g g g a g c g g g c c a t c a a t g c g a c n Downstream nucleotide summary: a: 6, c: 8, g: 10, t: 3, other: 1 Dinucleotide summary: aa: 3, ac: 5, ag: 3, at: 3, ca: 2, cc: 1, cg: 4, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 0, tc: 2, tg: 1, tt: 0, other: 1 >chr1:20973622-20973982 (-) caaaaaaaaaaaaaaaaaaaaaagccaactcccagctgggcgtggtggctcatacctgtaatcccaacattttggaggctgaggtgggtggatcacttgaggccaggagtttgagaccagcctggccaacagtgaaaccccatctccactaaaaataataatcccagcgctttgggaggccgaagcaggtggatcacgaagtcaggagatagagaccatcctggctaacatggtgaaaccccgtctgtactaaaaatacaaaaaaattagccgggcgtggtggtgggcgcctgtagtcccagctactcgggaggctgaagcaggagaatggtgtgaacctgggaggtagagcttgcagtga >AA493823:7-367 (+) caaaaaagaaaaaaaaaaaaaaagccaactcccggctgggcgtggtggctcatacctgtagtcccagcattttggaggctgaggtgggtggatcgcttggggccgggagtttgggaccagcctggccgacggtgaagccccatctccactaaaaataataatcccagcgctttgggaggccgaggcgggtggatcatgaggtcaggagatagagaccatcctggctagcatggtgaagccccgtctgtactagaagtgcgaaaaggttaaccgggcgtggtggtgggcgcctgtggtcccagctgctcgggaggctgaggcaggagaatggtgtgggcctgggaggtagagcttgcagtgg End editing Edited EST: AI053709, type: ag Aligns to: chr1:20971650-20971957 (-+) All mismatches: cg (47), ag (52), ag (58), ag (59), ag (62), ag (63), ag (71), ag (88), ag (116), ag (119), ag (124), ag (133), ag (139), ag (142), ag (148), ag (179), ag (180), ag (181), ag (193), ag (194), ag (202), ag (206), ag (220), ag (233), at (235), Editing mismatches: 23, all mismatches: 25, alignment length: 308, cluster length: 182, total number of As: 41 Locations in RNA: 52 58 59 62 63 71 88 116 119 124 133 139 142 148 179 180 181 193 194 202 206 220 233 Locations in genome: 20971906 20971900 20971899 20971896 20971895 20971887 20971870 20971842 20971839 20971834 20971825 20971819 20971816 20971810 20971779 20971778 20971777 20971765 20971764 20971756 20971752 20971738 20971725 Upstream nucleotide (in genome): c c a c a t t c c t t t t c c a a c a t c a t Upstream nucleotide summary: a: 6, c: 9, g: 0, t: 8, other: 0 Downstream nucleotide (in genome): g a g a t c g c g a t g g g a a c a g c c a c Downstream nucleotide summary: a: 7, c: 6, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 2, at: 1, ca: 4, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 3, tg: 3, tt: 1, other: 0 >chr1:20971650-20971957 (-) caagctggagtgcagtagcacgatcttggctcactgcaacctccaccttccaggttcaagcaattctcctacctcagcctcccgagtagctgggattataggtgcccgccaccacaccaggctaatttttgtatgtttagtagatacagggtttcatcatgttggccaggctggtctcaaactcctgacctcaagtgatctacccacctccgccttccaaagtgctgggattacaggcgtcagccaccattcccggcctcctaataaccttaatcactgttagggttaggccgttcctcttccccttc >AI053709:1-308 (+) caagctggagtgcagtagcacgatcttggctcactgcaacctccacgttccgggttcgggcggttctcctgcctcagcctcccgagtggctgggattataggtgcccgccaccacgccgggctgatttttgtgtgtttggtggatacggggtttcatcatgttggccaggctggtctcgggctcctgacctcgggtgatctgcccgcctccgccttccagagtgctgggattgctggcgtcagccaccattcccggcctcctaataaccttaatcactgttagggttaggccgttcctcttccccttc End editing Edited EST: AV746761, type: ag Aligns to: chr1:37963227-37963462 (-+) All mismatches: ag (47), ag (56), ag (60), ag (124), ag (127), ag (129), ag (135), ag (139), ag (155), ag (166), ag (188), ag (195), ag (198), ag (225), ag (268), ag (269), Editing mismatches: 16, all mismatches: 16, alignment length: 233, cluster length: 226, total number of As: 62 Locations in RNA: 47 56 60 124 127 129 135 139 155 166 188 195 198 225 268 269 Locations in genome: 37963452 37963443 37963439 37963375 37963372 37963370 37963364 37963357 37963341 37963330 37963308 37963301 37963298 37963271 37963228 37963227 Upstream nucleotide (in genome): t g c t t a c t c a g g a t c a Upstream nucleotide summary: a: 4, c: 4, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): g g g c a a a g g t g g t c a n Downstream nucleotide summary: a: 4, c: 2, g: 7, t: 2, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 2, ca: 2, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 3, gt: 0, ta: 1, tc: 2, tg: 2, tt: 0, other: 1 >chr1:37963227-37963462 (-) ccagcactttagggggccgaggcagatggatcacctgaggtcaggagttcgagaccagcttggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctggacctagtggcaggcgcctgtaatcccagctgctagggaggctgagacaggagaatcgtttgaacccaggaggcggaggttacagtgagccaagattgcgccattgcactccagcctgggtgacaa >AV746761:37-269 (+) ccagcactttggggggccggggcggatggatcacctgaggtcaggagttcgagaccagcttggccaacatggtgaaaccctgtctctgctgagaatacga---ttggctggacctagtggcgggcgcctgtagtcccagctgctagggaggctgggacaggggagncgtttgaacccangaggcggaggttgcagtgagccaagattgcgccattgcactccancctgggtgacgg End editing Edited EST: DB185994, type: ag Aligns to: chr20:32862352-32862841 (-+) All mismatches: ga (74), ag (158), ag (163), ag (164), ag (165), ag (171), ag (212), ag (217), ag (232), ag (237), ag (238), ag (263), ag (264), ag (265), ag (267), ag (272), ag (277), ag (295), ag (328), ag (332), ag (354), ag (365), ag (366), ag (367), ag (379), ag (380), ag (383), ag (384), ag (405), ag (406), ag (407), ag (416), ag (419), ag (437), Editing mismatches: 33, all mismatches: 34, alignment length: 491, cluster length: 279, total number of As: 66 Locations in RNA: 158 163 164 165 171 212 217 232 237 238 263 264 265 267 272 277 295 328 332 354 365 366 367 379 380 383 384 405 406 407 416 419 437 Locations in genome: 32862756 32862752 32862751 32862750 32862744 32862703 32862698 32862683 32862678 32862677 32862652 32862651 32862650 32862648 32862643 32862638 32862620 32862587 32862583 32862561 32862550 32862549 32862548 32862536 32862535 32862532 32862531 32862510 32862509 32862508 32862499 32862496 32862478 Upstream nucleotide (in genome): g c a a c c c g c a c a a t c t c t g c c a a c a c a c a a a t t Upstream nucleotide summary: a: 12, c: 13, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): g a a g t c g g a g a a t g g c c g t g a a c a g a t a a g t c c Downstream nucleotide summary: a: 11, c: 6, g: 11, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 4, at: 3, ca: 7, cc: 2, cg: 3, ct: 1, ga: 0, gc: 0, gg: 2, gt: 1, ta: 0, tc: 3, tg: 2, tt: 0, other: 0 >chr20:32862352-32862841 (-) agctgggagggaattttgcccaaggtcatacagcagtgaggggcagtgctggaacaggaatttgtaccacctgactcttttaaagagac-aaagtctcattttgtcatccaggctggagtatagtcacattcatggctcactgcagccttgaactcccgagctcaagcgatcctcctgcctcagcctcccaaatagctcagactacaggcgcgtgccaccacacctggctaatttaatttaaaatttttttttgtagagatgggggctcgccatgttgcccaggctggtctcaaactcctgggctcaagcaatcctcctgcctcggcctcccaaagtgctggaattacaggagtgagccaccataccccagcccctcttgattctttatcagtgccctatcctgtacctctcatggcctcttgagtaagtactgacccaagaaaagaagatgcagctgcttctctccagaagctccactagtgagactact >DB185994:73-563 (+) aactgggagggaattttgcccaaggtcatacagcagtgaggggcagtgctggaacaggaatttgtaccacctgactcttttaaagggacnggggtctcgttttgtcatccaggctggagtatagtcacattcatggctcgctgcggccttgaactcccgggctcgggcgatcctcctgcctcagcctcccgggtggctcggactgcaggcgcgtgccaccacgcctggctaatttaatttaaaatttttttttgtggaggtgggggctcgccatgttgcccgggctggtctcgggctcctgggctcgggcggtcctcctgcctcggcctcccggggtgctggagttgcaggagtgagccaccatgccccagcccctcttgattctttatcagtgccctatcctgtacctctcatggcctcttgagtaagtactgacccaagaaaagaagatgcagctgcttctctccagaagctccactagtgagactact End editing Edited EST: DW408476, type: ag Aligns to: chr20:35423274-35423601 (-+) All mismatches: ag (20), ag (39), ag (58), ag (63), ag (100), ag (103), ag (105), ag (106), ag (112), ag (138), ag (139), ag (179), ag (180), ag (194), ag (204), ag (214), ag (239), ag (241), ag (244), ag (246), ag (247), ag (249), ag (260), ac (266), ac (268), ag (271), ga (272), ag (282), ag (285), ag (301), ag (307), ag (317), ag (330), ag (331), ag (332), ag (343), Editing mismatches: 33, all mismatches: 36, alignment length: 327, cluster length: 325, total number of As: 95 Locations in RNA: 20 39 58 63 100 103 105 106 112 138 139 179 180 194 204 214 239 241 244 246 247 249 260 271 282 285 301 307 317 330 331 332 343 Locations in genome: 35423598 35423579 35423560 35423555 35423518 35423515 35423513 35423512 35423506 35423480 35423479 35423439 35423438 35423424 35423414 35423404 35423379 35423377 35423374 35423372 35423371 35423369 35423358 35423347 35423336 35423332 35423316 35423310 35423300 35423287 35423286 35423285 35423274 Upstream nucleotide (in genome): g c c c a t c a t t a g a a g c g c a c a g a a a c c t t g a a c Upstream nucleotide summary: a: 12, c: 10, g: 6, t: 5, other: 0 Downstream nucleotide (in genome): g c g g a c a a g a t a c g g t c g c a g c g g g g c g c a a t n Downstream nucleotide summary: a: 8, c: 8, g: 13, t: 3, other: 1 Dinucleotide summary: aa: 3, ac: 2, ag: 5, at: 2, ca: 2, cc: 2, cg: 4, ct: 1, ga: 2, gc: 2, gg: 2, gt: 0, ta: 1, tc: 2, tg: 2, tt: 0, other: 1 >chr20:35423274-35423601 (-) gggaggctgaggcgggtggatcacctgaggtcaggagttccagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggcgtggtggcgcacgcctgtaatttcatctgctccggatgctgagacaggagaatctcttgaacctggagggtggaagttgtagtgagccgagatcatgccactgcactccagcctgggtgacagaacaagactctgtctcaagaaaaaaaaaagaaaaaaaaaagccaggtttggtggtgcacacctgtagtcccagctactctggaggctgaaatgggaggatca >DW408476:17-343 (+) ggggggctgaggcgggtggatcgcctgaggtcaggagttccggaccggcctggccaacatggtgaaaccccgtctctactaaagatgcggaaattggctgggcgtggtggcgcacgcctgtggtttcatctgctccggatgctgagacaggagaatctcttgggcctggagggtggaggttgtagtgggccgagatcgtgccactgcactccagcctgggtggcggagcggggctctgtctcaggaaaacacaagaaaaaaaaaag-ccgggtttggtggtgcacgcctgtggtcccagctgctctggaggctggggtgggaggatcg End editing Edited EST: DW412908, type: ag Aligns to: chr20:52172687-52172996 (-+) All mismatches: ag (15), ag (70), ag (76), ag (116), ag (130), ag (149), ag (150), ag (165), ag (167), ag (170), ag (175), ag (179), ag (205), ag (206), ag (211), ag (215), ag (228), ag (238), ag (245), ag (246), ag (247), ag (258), ag (260), ag (265), ag (278), ag (305), Editing mismatches: 26, all mismatches: 26, alignment length: 309, cluster length: 292, total number of As: 78 Locations in RNA: 15 70 76 116 130 149 150 165 167 170 175 179 205 206 211 215 228 238 245 246 247 258 260 265 278 305 Locations in genome: 52172995 52172939 52172933 52172893 52172879 52172860 52172859 52172844 52172842 52172839 52172834 52172830 52172804 52172803 52172798 52172794 52172781 52172771 52172764 52172763 52172762 52172751 52172749 52172744 52172731 52172704 Upstream nucleotide (in genome): g g c c c a a a a t a t t a c c g a t a a c g t g c Upstream nucleotide summary: a: 9, c: 7, g: 5, t: 5, other: 0 Downstream nucleotide (in genome): g a g g g a a a a c a g a t g c g t a a c g g c t a Downstream nucleotide summary: a: 10, c: 4, g: 9, t: 3, other: 0 Dinucleotide summary: aa: 6, ac: 1, ag: 0, at: 2, ca: 1, cc: 1, cg: 5, ct: 0, ga: 1, gc: 0, gg: 3, gt: 1, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr20:52172687-52172996 (-) gagtgcagcacacgttgaaaagtgaaaccctggctgggcgcgggggctcatacctggaatcccagcactttgggagaccgaggtgggcagataacctgaggtcaggagtttgagaccagcctgaccaacatggtgaaaacccgtctctactaaaaatacaaaaattagccgagtgtggtggtgggcgcctgtaatcccagccactctggaggctgaggcaggagaatttcttaaacccgggaggcagaggctacagtgagctgagatcatgccattgcactccagcctgggcaacaagagtgaacctctg >DW412908:14-322 (+) ggg-gcagcacacgttgaaaagtgaaaccctggctgggcgcgggggctcatacctgggatcccggcactttgggagaccgaggtgggcagataacctgaggtcgggagtttgagaccggcctgaccaacatggtgaggacccgtctctactagagatgcaaagattggccgagtgtggtggtgggcgcctgtggtcccggccgctctggaggctggggcaggagagtttcttgggcccgggaggcgggggctgcagtgagctgaggtcatgccattgcactccagcctgggcgacaagagtgaacctctg End editing Edited EST: DW415276, type: ag Aligns to: chr20:44584907-44585203 (-+) All mismatches: ag (72), ag (80), ag (81), ag (86), ag (102), ag (103), ag (116), ag (121), ag (126), ag (140), ag (149), ag (150), ag (152), ag (158), ag (159), ag (160), ag (174), ag (175), ag (176), ag (180), ag (184), ag (188), ag (214), ag (215), ag (220), ag (224), ag (231), ag (241), ag (246), ag (247), ag (256), ct (266), ag (274), ag (280), ag (287), Editing mismatches: 34, all mismatches: 35, alignment length: 297, cluster length: 216, total number of As: 58 Locations in RNA: 72 80 81 86 102 103 116 121 126 140 149 150 152 158 159 160 174 175 176 180 184 188 214 215 220 224 231 241 246 247 256 274 280 287 Locations in genome: 44585148 44585140 44585139 44585134 44585118 44585117 44585104 44585099 44585094 44585080 44585071 44585070 44585068 44585062 44585061 44585060 44585046 44585045 44585044 44585040 44585036 44585032 44585006 44585005 44585000 44584996 44584989 44584979 44584974 44584973 44584964 44584946 44584940 44584933 Upstream nucleotide (in genome): t t a c c a c g c c c a c g a a t a a t a t t a c c g c g a a t g g Upstream nucleotide summary: a: 11, c: 10, g: 6, t: 7, other: 0 Downstream nucleotide (in genome): t a t g a g c g g g a c t a a c a a a c a g a t g c g g a t c c g t Downstream nucleotide summary: a: 11, c: 7, g: 10, t: 6, other: 0 Dinucleotide summary: aa: 4, ac: 3, ag: 1, at: 3, ca: 2, cc: 2, cg: 5, ct: 1, ga: 2, gc: 0, gg: 3, gt: 1, ta: 3, tc: 2, tg: 1, tt: 1, other: 0 >chr20:44584907-44585203 (-) gcttacaaaagcacatgcttgtaaaagaaacaaaatgggcctggcgtggtggcttatgcctgtaatcccagcactttgggacgccaaggtggctggatcacctgaggtcaggagttcgagaccagcctgaccaacatggagaaaccccattgctactaaaaatacaaaattagctgggcgtggtggcacacgtctgtaatcccagccactcgggaggccgaggcaggagaatcgcttgaacccaggaggcggaggttacggtgagccgagattgcgccattgcactccagcctggcc >DW415276:17-313 (+) gcttacaaaagcacatgcttgtaaaagaaacaaaatgggcctggcgtggtggcttgtgcctgtggtcccggcactttgggacgccggggtggctggatcgcctggggtcgggagttcgagaccggcctgaccggcgtggaggggccccattgctactgggaatgcaagattggctgggcgtggtggcacacgtctgtggtcccggccgctcggggggccgaggcgggagggtcgcttgagcccaggaggtggaggttgcggtgggccgaggttgcgccattgcactccagcctggcc End editing Edited EST: DW415870, type: ag Aligns to: chr20:52172698-52172996 (-+) All mismatches: ag (15), ag (70), ag (76), ag (116), ag (130), ag (149), ag (150), ag (165), ag (167), ag (170), ag (175), ag (179), ag (205), ag (206), ag (211), ag (215), ag (228), ag (238), ag (245), ag (246), ag (247), ag (258), ag (260), ag (265), ag (278), ag (305), Editing mismatches: 26, all mismatches: 26, alignment length: 298, cluster length: 292, total number of As: 78 Locations in RNA: 15 70 76 116 130 149 150 165 167 170 175 179 205 206 211 215 228 238 245 246 247 258 260 265 278 305 Locations in genome: 52172995 52172939 52172933 52172893 52172879 52172860 52172859 52172844 52172842 52172839 52172834 52172830 52172804 52172803 52172798 52172794 52172781 52172771 52172764 52172763 52172762 52172751 52172749 52172744 52172731 52172704 Upstream nucleotide (in genome): g g c c c a a a a t a t t a c c g a t a a c g t g c Upstream nucleotide summary: a: 9, c: 7, g: 5, t: 5, other: 0 Downstream nucleotide (in genome): g a g g g a a a a c a g a t g c g t a a c g g c t a Downstream nucleotide summary: a: 10, c: 4, g: 9, t: 3, other: 0 Dinucleotide summary: aa: 6, ac: 1, ag: 0, at: 2, ca: 1, cc: 1, cg: 5, ct: 0, ga: 1, gc: 0, gg: 3, gt: 1, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr20:52172698-52172996 (-) gagtgcagcacacgttgaaaagtgaaaccctggctgggcgcgggggctcatacctggaatcccagcactttgggagaccgaggtgggcagataacctgaggtcaggagtttgagaccagcctgaccaacatggtgaaaacccgtctctactaaaaatacaaaaattagccgagtgtggtggtgggcgcctgtaatcccagccactctggaggctgaggcaggagaatttcttaaacccgggaggcagaggctacagtgagctgagatcatgccattgcactccagcctgggcaacaaga >DW415870:14-311 (+) ggg-gcagcacacgttgaaaagtgaaaccctggctgggcgcgggggctcatacctgggatcccggcactttgggagaccgaggtgggcagataacctgaggtcgggagtttgagaccggcctgaccaacatggtgaggacccgtctctactagagatgcaaagattggccgagtgtggtggtgggcgcctgtggtcccggccgctctggaggctggggcaggagagtttcttgggcccgggaggcgggggctgcagtgagctgaggtcatgccattgcactccagcctgggcgacaaga End editing Edited EST: AW631318, type: ga Aligns to: chr20:62577297-62577629 (-+) All mismatches: ga (53), gt (54), ga (110), ga (112), ga (130), ga (142), ga (163), ga (174), gt (179), ga (187), ga (189), ga (199), ga (210), ga (216), ga (217), ga (225), ga (234), ga (241), ga (242), ga (256), ga (258), ga (259), ga (262), ga (268), ga (269), ga (270), ga (286), ga (290), ga (293), ga (294), ga (299), ga (300), ga (301), ga (303), ga (305), ga (315), ga (317), ga (327), ga (349), ga (351), ga (354), ga (358), ga (367), ga (370), ga (371), ga (375), ga (379), Editing mismatches: 45, all mismatches: 47, alignment length: 332, cluster length: 328, total number of Gs: 100 Locations in RNA: 53 110 112 130 142 163 174 187 189 199 210 216 217 225 234 241 242 256 258 259 262 268 269 270 286 290 293 294 299 300 301 303 305 315 317 327 349 351 354 358 367 370 371 375 379 Locations in genome: 62577625 62577567 62577565 62577547 62577535 62577514 62577503 62577490 62577488 62577478 62577467 62577461 62577460 62577452 62577443 62577436 62577435 62577421 62577419 62577418 62577415 62577409 62577408 62577407 62577391 62577387 62577384 62577383 62577378 62577377 62577376 62577374 62577372 62577362 62577360 62577350 62577328 62577326 62577323 62577319 62577311 62577308 62577307 62577302 62577298 Upstream nucleotide (in genome): c c a g t a c c a t t t g t a t g c t g t t g g t c t g t g g t a t t t g t t t a a g a c Upstream nucleotide summary: a: 8, c: 7, g: 11, t: 19, other: 0 Downstream nucleotide (in genome): g a g g t g c a g t a g a c g g t t g c c g g a t c g c g g t a g t c c t c a a c g a g c Downstream nucleotide summary: a: 9, c: 11, g: 17, t: 8, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 7, at: 0, ca: 2, cc: 3, cg: 1, ct: 1, ga: 3, gc: 2, gg: 3, gt: 3, ta: 4, tc: 5, tg: 6, tt: 4, other: 0 >chr20:62577297-62577629 (-) cgccggcaggcttgggaggcggcagtgcctctgggaagaccactgtggccagaatgatcatcgaggccctggatgtgccctgggtggtcttgctgtccatggactccttctacaaggtgggcccccgcccagctcccccgaggacccctttgtcctctccctgaccctggaccccctgcaaaagtaggtccctggtctcagccccagcgtggctgctcctgggaggcctagagcccctgtccgctggcattgggtgagggccctactgtgcccacagctgctccacagcctcccccaccaggtgctgactgagc-agcagcaggaacaggccgc >AW631318:49-380 (+) cgccatc-ggcttgggaggcggcagtgcctctgggaagaccactgtggccanaatgatcatcaaagccctggatgtgccctgagtggtcttgctatccatggactccttctacaaagtgggcccccacccatctcccccaaagacccctttatcctctccctaaccctaaaccccctacaaaagtaagtccctaatctcagccccagcataactactcctaaaaggcctagagcccctatccactaacattaaataaaggccctactatacccacagctactccacagcctcccccaccagatactaactaagccagcaacaaaa-caagccac End editing Edited EST: DA703512, type: ag Aligns to: chr21:45644295-45644590 (-+) All mismatches: ag (24), ag (29), ag (72), ag (87), ag (97), ag (115), ag (119), ag (129), ag (145), ag (151), ag (159), ag (164), ag (170), ag (173), ag (179), ag (187), ag (210), ag (211), ag (224), ag (225), ag (226), ag (251), ag (252), ag (264), Editing mismatches: 24, all mismatches: 24, alignment length: 299, cluster length: 238, total number of As: 54 Locations in RNA: 24 29 72 87 97 115 119 129 145 151 159 164 170 173 179 187 210 211 224 225 226 251 252 264 Locations in genome: 45644567 45644562 45644519 45644504 45644494 45644476 45644472 45644462 45644446 45644440 45644435 45644430 45644424 45644421 45644415 45644407 45644384 45644383 45644370 45644369 45644368 45644343 45644342 45644330 Upstream nucleotide (in genome): c t c g a c t t c c a t t t c c c a c a a a a t Upstream nucleotide summary: a: 7, c: 9, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): g t a a t a g c t g t t g g g c a a a a t a g c Downstream nucleotide summary: a: 8, c: 3, g: 7, t: 6, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 1, at: 3, ca: 4, cc: 1, cg: 3, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 3, tt: 2, other: 0 >chr21:45644295-45644590 (-) tattattttattttttttgagccagagtatcgctctgtcacctaggctggagtgcaatctctgctcattgcaacatctgcctcccgaactcaagcaattctgcctcagcctcccaagtagctgggattacaggtgtgcgccaccatgcccaggt-a--attgtatttttagtagagacagggtttcaccatgttggtcaggctggtttcaaactcctgacctcaaatgatctgcccacctcgacctcccaaagtgctgggattacaggtgcgagccaccgcacctggctaccagacact >DA703512:1-299 (+) tattattttattttttttgagccggagtgtcgctctgtcacctaggctggagtgcaatctctgctcattgcgacatctgcctcccggactcaagcagttctgcctcagcctcccgagtggctgggattgcaggtgtgcgccaccgtgcccgggtaattgttgtgtttttggtggagacggggtttcgccatgttggtcaggctggtttcggactcctgacctcgggtgatctgcccacctcgacctcccagggtgctgggattgcaggtgcgagccaccgcacctggctaccanacact End editing Edited EST: DB068212, type: ag Aligns to: chr21:47873525-47874074 (-+) All mismatches: cg (21), ag (170), ag (176), ag (218), ag (220), ag (243), ag (253), ag (276), ag (282), ag (283), ag (331), ag (344), ag (348), ag (353), ag (358), Editing mismatches: 14, all mismatches: 15, alignment length: 551, cluster length: 188, total number of As: 53 Locations in RNA: 170 176 218 220 243 253 276 282 283 331 344 348 353 358 Locations in genome: 47873905 47873899 47873858 47873856 47873833 47873823 47873800 47873794 47873793 47873745 47873732 47873728 47873723 47873718 Upstream nucleotide (in genome): g a c t a a c t a g c g g c Upstream nucleotide summary: a: 4, c: 4, g: 4, t: 2, other: 0 Downstream nucleotide (in genome): g g t g a t c a t g g g g t Downstream nucleotide summary: a: 2, c: 1, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 2, ca: 0, cc: 1, cg: 1, ct: 2, ga: 0, gc: 0, gg: 4, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr21:47873525-47874074 (-) tttaatttaccagcatgacccctgcagaagtcacaaggatcctggagaatggcagcctactctatttgctgtcaaccagtagttgttttgggtacactgctgcaaactcatctaagaagtatccctggccgggcacagtggctcacgcctgtaatcccagcactttgggaggataaggtgggc-ggaacacgaggtcaggagttcagtctggccaacatagtgaaaccctgtctctactaaaaatacaaaaaattagctgggtgtggtggtgtgcacctgtaatcccagctacttgggaggctgaggcaggagaatcccatgaacctgggaggtggaggttgcagtgagccgagatcatgccattgcactccagcccaggtgacagtgtgagactctatctcaaaaaaaaaaaaaaaaagtatccgtaatagcctctctgccagatatggtaggtagttgttgactaggtggatttgttcttttctgtacctatcagggatcaaaaacattttgcatttgcatggaattaaaatgcagttttgccggaagg >DB068212:1-551 (+) tttaatttaccagcatgaccgctgcagaagtcacaaggatcctggagaatggcagcctactctatttgctgtcaaccagtagttgttttgggtacactgctgcaaactcatctaagaagtatccctggccgggcacagtggctcacgcctgtaatcccagcactttggggggatagggtgggcnggaacacgaggtcaggagttcagtctggccaacgtggtgaaaccctgtctctactaaagatacaaaaagttagctgggtgtggtggtgtgcgcctgtggtcccagctacttgggaggctgaggcaggagaatcccatgaacctggggggtggaggttgcggtgggccgggatcgtgccattgcactccagcccaggtgacagtgtgagactctatctcaaaaaaaaaaaaaaaaagtatccgtaatagcctctctgccagatatggtaggtagttgttgactaggtggatttgttcttttctgtacctatcagggatcaaaaacattttgcatttgcatggaattaaaatgcagttttgccggaagg End editing Edited EST: BM692470, type: ag Aligns to: chr21:33944729-33945137 (-+) All mismatches: ag (288), ag (296), ag (318), ag (319), ag (327), ag (335), ag (340), ag (355), ag (363), ag (368), ta (401), ag (406), ag (407), Editing mismatches: 12, all mismatches: 13, alignment length: 408, cluster length: 121, total number of As: 47 Locations in RNA: 288 296 318 319 327 335 340 355 363 368 406 407 Locations in genome: 33944850 33944842 33944820 33944819 33944811 33944803 33944798 33944783 33944775 33944770 33944731 33944730 Upstream nucleotide (in genome): c t c a c a g a a t a a Upstream nucleotide summary: a: 6, c: 3, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): c a a g g g g c a g a a Downstream nucleotide summary: a: 5, c: 2, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 2, at: 0, ca: 1, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr21:33944729-33945137 (-) tgcacagcaggaagtgagcggcgggcaagacaggggagctttgtctgtatttacagccacaccccatcgctccgttaggcctgagctccgcctccttcagaccagtggcagcatttgattctcataggagtgcgaaccctactgtgaactgcgcatgcgagggatctaggctgtgcgctcctcatgagaatctaatgcctgatgatctctcactgtctctcttcacccctagatcagaccctctagttgcaggaaaaaaagctcagggcggtcgagtgcagtggctcacgcctgtaatcccagcactttgggaggccaaggtgggcagatcacaaggtgaggagttcgagaccaacctggtaaacatagggaaaccctatctcttctaaaaaaaaaaaaatacaaaaaa >BM692470:1-408 (+) tgcacagcaggaagtgagcggcgggcaagacaggggagctttgtctgtatttacagccacaccccatcgctccgttaggcctgagctccgcctccttcagaccagtggcagcatttgattctcataggagtgcgaaccctactgtgaactgcgcatgcgagggatctaggctgtgcgctcctcatgagaatctaatgcctgatgatctctcactgtctctcttcacccctagatcagaccctctagttgcaggaaaaaaagctcagggcggtcgagtgcagtggctcgcgcctgtgatcccagcactttgggaggccggggtgggcggatcacagggtggggagttcgagaccagcctggtagacatggggaaaccctatctcttctaaaaaaaaaaaaaaa-aaagga End editing Edited EST: DW426821, type: ag Aligns to: chr22:42082657-42082929 (-+) All mismatches: ag (10), tc (13), ag (36), ag (37), ag (53), ag (72), ag (80), ag (83), ag (88), ag (89), ag (139), ag (147), ag (169), ag (170), ag (179), ag (245), Editing mismatches: 15, all mismatches: 16, alignment length: 273, cluster length: 236, total number of As: 61 Locations in RNA: 10 36 37 53 72 80 83 88 89 139 147 169 170 179 245 Locations in genome: 42082928 42082902 42082901 42082885 42082866 42082858 42082855 42082850 42082849 42082799 42082791 42082769 42082768 42082759 42082693 Upstream nucleotide (in genome): c t a g c c g c a a c t a t c Upstream nucleotide summary: a: 4, c: 6, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g a t g t g g a g a g a t c t Downstream nucleotide summary: a: 4, c: 1, g: 6, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 2, ca: 1, cc: 0, cg: 3, ct: 2, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr22:42082657-42082929 (-) cagctgggcacggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggtggatcatgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggtgcgtgcctgtaatcccagctacttaggaggctgaggcaggagaatcactataaccggggaggcggtgtttgcagtgagccgagatcatgccactgcactacagcctgggtgacaaagcaagac >DW426821:9-281 (+) cggccgggcacggtggctcacgcctgtggtcccagcactttggggggctgaggcgggtggatcgtgaggtcgggggttcgggaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaagattagccgggcgtggtggtgcgtgcctgtggtcccagctgcttaggaggctgaggcaggagaatcactataaccggggaggcggtgtttgcagtgagccgagatcgtgccactgcactacagcctgggtgacaaagcaagac End editing Edited EST: DW467240, type: ag Aligns to: chr22:43200486-43200818 (-+) All mismatches: ag (15), ag (16), ag (32), ag (38), ag (39), ag (45), ag (47), ag (61), ag (65), ag (93), ag (95), ag (118), ag (138), ag (141), ag (142), ag (147), ag (152), ag (158), ag (174), ct (184), ag (219), ag (227), ag (242), ag (307), ag (317), cg (321), ag (330), ag (334), Editing mismatches: 26, all mismatches: 28, alignment length: 333, cluster length: 320, total number of As: 88 Locations in RNA: 15 16 32 38 39 45 47 61 65 93 95 118 138 141 142 147 152 158 174 219 227 242 307 317 330 334 Locations in genome: 43200818 43200817 43200801 43200795 43200794 43200788 43200786 43200772 43200768 43200740 43200738 43200715 43200695 43200692 43200691 43200686 43200681 43200675 43200659 43200614 43200606 43200591 43200526 43200516 43200503 43200499 Upstream nucleotide (in genome): n a c t a a c g t a g a t a a t c c t a g a t t g c Upstream nucleotide summary: a: 9, c: 5, g: 4, t: 7, other: 1 Downstream nucleotide (in genome): a g c a t c c g g g g c c a a g g g a g g c g c g g Downstream nucleotide summary: a: 5, c: 7, g: 13, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 3, at: 1, ca: 0, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 4, gt: 0, ta: 2, tc: 2, tg: 3, tt: 0, other: 1 >chr22:43200486-43200818 (-) aaggcacggtgactcacacctgtaatcccaacactttgggaggccgaggtaggcggatcacctgaggtcgagagttcaagagcagcctggctaacatggtgaaaccccatcccttctaaaaatacaaaaattaggccagtcacagtggctcacgcctgtaatcccagtactttgggaggccgaggcgggtggatcacgaggtcaagagatcgagaccagcctggccaacatggtgaagccccatctctactaaaaatacaaaaactagcttggcgtggtggcatgtgcctgtagtcccagctactccggaggctgaggcaggagtatcgcttg >DW467240:15-347 (+) ggggcacggtgactcacgcctgtggtcccagcgctttgggaggccggggtgggcggatcacctgaggtcgagagttcaggggcagcctggctaacatggtgaagccccatcccttctaaaaatgcaggaattgggccggtcacggtggctcacgcctgtgatcccagtattttgggaggccgaggcgggtggatcacgaggtcaggagatcgggaccagcctggccagcatggtgaagccccatctctactaaaaatacaaaaactagcttggcgtggtggcatgtgcctgtggtcccagctgctcgggaggctggggcgggagtatcgcttg End editing Edited EST: H43801, type: ag Aligns to: chr2:77402560-77403053 (-+) All mismatches: ag (7), ag (10), ag (17), ag (19), ag (29), ag (33), ag (38), ag (43), ag (48), ag (62), ag (72), ag (73), ct (75), ag (76), ag (80), ag (81), ag (82), ag (97), ag (98), Editing mismatches: 18, all mismatches: 19, alignment length: 495, cluster length: 90, total number of As: 26 Locations in RNA: 7 10 17 19 29 33 38 43 48 62 72 73 76 80 81 82 97 98 Locations in genome: 77403052 77403049 77403043 77403041 77403031 77403027 77403022 77403017 77403012 77402998 77402989 77402988 77402986 77402981 77402980 77402979 77402964 77402963 Upstream nucleotide (in genome): c c g g c c c g c c c a c t a a a a Upstream nucleotide summary: a: 5, c: 9, g: 3, t: 1, other: 0 Downstream nucleotide (in genome): g c g g g g c g g g a c t a a a a t Downstream nucleotide summary: a: 5, c: 3, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 0, at: 1, ca: 1, cc: 2, cg: 5, ct: 1, ga: 0, gc: 0, gg: 3, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr2:77402560-77403053 (-) cagcac-tttgagagactgaggcaggcagatcacttgaggtcaggagttcgagaccagcctgg-ccaa-catggtaaaacccgtctctgctaaatatacaaaattagccaggtgtggttgttgaggtgatcagaaccaacatcgggtgtgggggtgacaaagtctggcagagtcaaaggattgagaaaaagacagtttaagaagtaaagtaggaccaaggggctatcatgatggtggaggctgcaaaggccctgaactctgggggcccatggtattttttggtaatccaacaaagaaacaggtggtgagaaggtggaggtcaaaaggtcacgttgcatcaagtacatgatttacagctgtgatagtttagcatttgctctgctgcttgagataatggagagcaggttcttttaactcaagatacaatcaatcctaggagagcaaggagcaaggagccagcaagtctagacacattccagagccacgagccctggatt >H43801:6-500 (+) cggcgcttttgggggactgaggcgggcggatcgcttggggtcgggagttcgagaccggcctggcccggttg-ggtgggacccgtctctgctaggtatacaaaattagccaggtgtggttgttgaggtgatcagaaccaacatcgggtgtgggggtgacaaagtctggcagagtcaaaggattgagaaaaagacagtttaagaagtaaagtaggaccaaggggctatcatgatggtggaggctgcaaaggccctgaactctgggggcccatggtattttttggtaatccaacaaagaaacaggtggtgagaaggtggaggtcaaaaggtcacgttgcatcaagtacatgatttacagctgtgatagtttagcatttgctctgctgcttgagataatggagagcaggttcttttaactcaagatacaatcaatcctaggagagcaaggagcaaggagccagcaagtctagacac-ttccagagccacgagccntggatt End editing Edited EST: DA079658, type: ag Aligns to: chr2:27536658-27537228 (-+) All mismatches: ag (45), ag (78), ag (114), ag (115), ag (116), ag (118), ag (127), ag (132), ag (144), ag (154), ag (160), ag (176), ag (206), ag (222), ag (229), ag (240), ag (241), ag (242), ag (255), ag (258), ag (259), ag (272), ag (294), ag (361), ag (377), ag (383), ag (392), ag (395), ag (413), ag (431), ag (432), ag (449), ct (478), ag (490), ag (494), ag (512), ag (518), ag (522), ag (539), ag (554), Editing mismatches: 39, all mismatches: 40, alignment length: 571, cluster length: 510, total number of As: 123 Locations in RNA: 45 78 114 115 116 118 127 132 144 154 160 176 206 222 229 240 241 242 255 258 259 272 294 361 377 383 392 395 413 431 432 449 490 494 512 518 522 539 554 Locations in genome: 27537184 27537151 27537115 27537114 27537113 27537111 27537102 27537097 27537085 27537075 27537069 27537053 27537023 27537007 27537000 27536989 27536988 27536987 27536974 27536971 27536970 27536957 27536935 27536868 27536852 27536846 27536837 27536834 27536816 27536798 27536797 27536780 27536739 27536735 27536717 27536711 27536707 27536690 27536675 Upstream nucleotide (in genome): t a c a a c t c t t c c a t c c a a a c a c t c t c g a c c a c c c t c t c a Upstream nucleotide summary: a: 11, c: 18, g: 1, t: 9, other: 0 Downstream nucleotide (in genome): g t a a c g c g g c c g g t g a a c g a t g c g a g g g c a g t g t g g c g t Downstream nucleotide summary: a: 7, c: 8, g: 18, t: 6, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 4, at: 3, ca: 4, cc: 2, cg: 10, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 4, tg: 3, tt: 1, other: 0 >chr2:27536658-27537228 (-) atttgagcactcttgttttattactttttttttctttttgagatagggtcttgttctgtcgcccaggcagcagtgtaatggcgtgatcactgcagcctggacctcctgggctcaaacagtcctcctacttcagcctcctgagtagctgggactacaggcacgtgccaccgtgcccagctaattgtttaaaaaaattttttgtagaagtggggtcttgctatattgcccaggctggactcaaactcttgggctcaagcaatcctcctgcctcagcctcccagagtgccgggattacaggtgtgagccaccattccaggccggcactcttgttttagaaaaagatttattctggccaggcacagtggcttatgcctgtaatctcagcactttgagaagccgaggtgagcagatcacctgaggtcaggggttcaagatcagcctggctaacatggcaaaaccccatctctactaaaaatacaaaaaatagccaggcatggtggtgggtgcctgtagtcccagctacttgagaggctgaggcaggggaatcgcttgaatcgggaggcagaggttg >DA079658:1-571 (+) atttgagcactcttgttttattactttttttttctttttgagatggggtcttgttctgtcgcccaggcagcagtgtagtggcgtgatcactgcagcctggacctcctgggctcgggcggtcctcctgcttcggcctcctgagtggctgggactgcaggcgcgtgccaccgtgcccggctaattgtttaaaaaaattttttgtagaggtggggtcttgctatgttgcccgggctggactcgggctcttgggctcaggcggtcctcctgcctcggcctcccagagtgccgggattgcaggtgtgagccaccattccaggccggcactcttgttttagaaaaagatttattctggccaggcacggtggcttatgcctgtgatctcggcactttgggaggccgaggtgagcagatcgcctgaggtcaggggttcgggatcagcctggctaacgtggcaaaaccccatctctactaaaaatataaaaaatagccgggcgtggtggtgggtgcctgtggtcccggctgcttgagaggctgaggcgggggaatcgcttgagtcgggaggcagaggttg End editing Edited EST: DA412140, type: ag Aligns to: chr2:206983458-206984023 (-+) All mismatches: ag (227), ag (250), ag (258), ag (259), ag (264), ag (269), ag (275), ag (281), ag (294), ag (295), ag (312), ag (321), ag (324), ag (334), ag (336), ag (356), ag (361), ag (375), ag (378), ag (416), ag (438), ag (447), ag (448), ag (469), ag (492), ag (511), ag (514), ag (533), ag (565), Editing mismatches: 29, all mismatches: 29, alignment length: 566, cluster length: 339, total number of As: 69 Locations in RNA: 227 250 258 259 264 269 275 281 294 295 312 321 324 334 336 356 361 375 378 416 438 447 448 469 492 511 514 533 565 Locations in genome: 206983797 206983774 206983766 206983765 206983760 206983755 206983749 206983743 206983730 206983729 206983712 206983703 206983700 206983690 206983688 206983668 206983663 206983649 206983646 206983608 206983586 206983577 206983576 206983555 206983532 206983513 206983510 206983491 206983459 Upstream nucleotide (in genome): c c c a c c a c c a c g t t c c a t t a c c a t c t t t c Upstream nucleotide summary: a: 6, c: 14, g: 1, t: 8, other: 0 Downstream nucleotide (in genome): c g a t g c c c a g g g g c g g t g g a c a c c g g g t g Downstream nucleotide summary: a: 4, c: 8, g: 14, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 2, ca: 3, cc: 4, cg: 7, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 2, tg: 5, tt: 1, other: 0 >chr2:206983458-206984023 (-) tacctacttccagcctcatagaattgttttgatgattacatcagaaagcttgtaaaaaccttaggcctgtttcctgacatatactaaatgccccatgtgctaactgaggatgatcattgtaggaaaatttcatagactatgagggaaagccatgcctaaaataatctccagcttattaagaagtgcattcctttttgtttctttgttttatcttagattgagtctcactgtattgccagtctggagtgcagtggcgcaatctcagctcactgcaacctccacctcctgggttcaagcgatcctcctgcctcagcctcctgagtagctgggactacaggagcacaccaccacgcccagctaatttttgtgtttttagtagaggcggggtttcaccatgttgggcaggatggtctcaaactcctgacctcaggtgatccacccgcctcaacctcccagagtgctgggattacaggcgtgagctatccgtgcccagtcaatttttgtatttttagtagagatgaggtttcaccatattggtcaggctggtcttgaacccctgacctcag >DA412140:1-566 (+) tacctacttccagcctcatagaattgttttgatgattacatcagaaagcttgtaaaaaccttaggcctgtttcctgacatatactaaatgccccatgtgctaactgaggatgatcattgtaggaaaatttcatagactatgagggaaagccatgcctaaaataatctccagcttattaagaagtgcattcctttttgtttctttgttttatcttagattgagtctcgctgtattgccagtctggagtgcggtggcgcggtctcggctcgctgcagcctccgcctcctgggttcgggcgatcctcctgcctcggcctcctgggtggctgggactgcgggagcacaccaccacgcccggctagtttttgtgtttttggtggaggcggggtttcaccatgttgggcaggatggtctcagactcctgacctcaggtgatccgcccgcctcggcctcccagagtgctgggattgcaggcgtgagctatccgtgcccggtcaatttttgtatttttggtggagatgaggtttcaccatgttggtcaggctggtcttgaacccctgacctcgg End editing Edited EST: DA408828, type: ag Aligns to: chr2:86250729-86251261 (-+) All mismatches: ag (111), ag (117), ag (140), ag (148), ag (163), ag (171), ag (176), ag (193), ag (213), ag (214), ag (219), ag (220), ag (221), ag (249), ag (251), ag (252), ag (257), ag (261), ag (291), ag (295), ag (315), Editing mismatches: 21, all mismatches: 21, alignment length: 534, cluster length: 205, total number of As: 56 Locations in RNA: 111 117 140 148 163 171 176 193 213 214 219 220 221 249 251 252 257 261 291 295 315 Locations in genome: 86251151 86251145 86251122 86251114 86251099 86251091 86251086 86251069 86251049 86251048 86251043 86251042 86251041 86251013 86251011 86251010 86251005 86251001 86250971 86250967 86250947 Upstream nucleotide (in genome): c t g c c g c c a a a a a t t a c t a c g Upstream nucleotide summary: a: 7, c: 7, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): c a g g g g c a a t a a a t a t g c c g g Downstream nucleotide summary: a: 7, c: 4, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 0, at: 2, ca: 1, cc: 2, cg: 4, ct: 0, ga: 0, gc: 0, gg: 3, gt: 0, ta: 2, tc: 1, tg: 0, tt: 1, other: 0 >chr2:86250729-86251261 (-) ttaatcactcatctgttggtggacacttgggttgcctccacctcttggctgttgcaaataacgctgtgaacatggatatacagatatctgaggccaggccaggcgttcacacctgtaatcccaatacgttgggaggccgaggcgggcagatcatctgaggtcaggattcgagaccaccctggccaacatggcaaaaccccatctctactaaaaatacaaaaattagctgggtgtggtggtgcgcgcctataatcccagctactcgggaggctgaggcaggagaatcttgaactcaggaggtggaggttgcagtgagccgagattgcgccactgcactccagcctgggtgacagagtgagattccgtctcaaaaaaaaaaaaaaa-caaaaactcagaccctgctttcctttgaatatatactagaagtggaattgctggatcatatggtaattctttaatttttctgggggaactgctgtcccattttccacagcagctacaccattttatgttcccaccaacggtgtacaaca >DA408828:1-534 (+) ttaatcactcatctgttggtggacacttgggttgcctccacctcttggctgttgcaaataacgctgtgaacatggatatacagatatctgaggccaggccaggcgttcacgcctgtgatcccaatacgttgggaggccggggcgggcggatcatctgaggtcgggattcgggaccgccctggccaacatggcgaaaccccatctctactaaaggtacagggattagctgggtgtggtggtgcgcgcctgtggtcccggctgctcgggaggctgaggcaggagaatcttgagctcgggaggtggaggttgcagtgggccgagattgcgccactgcactccagcctgggtgacagagtgagattccgtctcaaaaaaaaaaaaaaaacaaaaactcagaccctgctttcctttgaatatatactagaagtggaattgctggatcatatggtaattctttaatttttctgggggaactgctgtcccattttccacagcagctacaccattttatgttcccaccaacggtgtacaaca End editing Edited EST: DB138516, type: ag Aligns to: chr2:74187532-74188059 (-+) All mismatches: ag (237), ag (252), ag (264), ag (269), ag (277), ag (278), ag (281), ag (285), ag (291), ga (357), ag (365), ag (394), ag (398), ag (434), Editing mismatches: 13, all mismatches: 14, alignment length: 528, cluster length: 198, total number of As: 39 Locations in RNA: 237 252 264 269 277 278 281 285 291 365 394 398 434 Locations in genome: 74187823 74187808 74187796 74187791 74187783 74187782 74187779 74187775 74187769 74187695 74187666 74187662 74187626 Upstream nucleotide (in genome): c a c c c a t t t t c c t Upstream nucleotide summary: a: 2, c: 6, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): g g c g a g g g c c a a c Downstream nucleotide summary: a: 3, c: 4, g: 6, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 3, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 3, tg: 2, tt: 0, other: 0 >chr2:74187532-74188059 (-) caggcacacaccaccacacccggctaattttttgtatttttattggagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcagttgatccacctgcctcagcctcccaaaatgctgggattacaggcgtgagccaccacgcctggcctgtacactttatttttaagagatagagtctcgctctgtcacctacaagtgcagtggcaggatcatagctcactgcagcctcctgggttcaagcgatcctcccacctcagcctcccaagtagctaggactacaggctcactccaccacacctggcttatttttttaatttttacttttttggagagctggcctctcgttatgttacctaggctggtctcaaactcctggcctcaagcaattctcttactttggcctctcaaatctctgggattacaggtgtgagccactgtgtgtggcctgaatcgtacagtttagatgagtgaattgtataatatgtgaattatgtatcaataaagctattaaaatg >DB138516:1-528 (+) caggcacacaccaccacacccggctaattttttgtatttttattggagacggggtttcaccatgttggccaggctggtctcaaactcctgacctcagttgatccacctgcctcagcctcccaaaatgctgggattacaggcgtgagccaccacgcctggcctgtacactttatttttaagagatagagtctcgctctgtcacctacaagtgcagtggcaggatcatagctcactgcggcctcctgggttcaggcgatcctcccgcctcggcctcccgggtggctgggactgcaggctcactccaccacacctggcttatttttttaatttttacttttttggagagctggcctctcattatgttgcctaggctggtctcaaactcctggcctcgagcgattctcttactttggcctctcaaatctctgggattgcaggtgtgagccactgtgtgtggcctgaatcgtacagtttagatgagtgaattgtataatatgtgaattatgtatcaataaagctattaaaatg End editing Edited EST: DW419827, type: ag Aligns to: chr2:171859093-171859380 (-+) All mismatches: ag (16), ag (29), ag (45), ag (52), ag (60), ag (72), ag (73), ag (74), ag (79), ag (80), ag (85), ag (89), ag (90), ag (91), ag (111), ag (112), ag (117), ag (179), ag (180), ac (236), Editing mismatches: 19, all mismatches: 20, alignment length: 288, cluster length: 165, total number of As: 57 Locations in RNA: 16 29 45 52 60 72 73 74 79 80 85 89 90 91 111 112 117 179 180 Locations in genome: 171859379 171859366 171859350 171859343 171859335 171859323 171859322 171859321 171859316 171859315 171859310 171859306 171859305 171859304 171859284 171859283 171859278 171859216 171859215 Upstream nucleotide (in genome): g g a c c a a a a a t c a a t a c t a Upstream nucleotide summary: a: 10, c: 4, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g a c a t a a t a a g a a t a t g a g Downstream nucleotide summary: a: 10, c: 1, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 5, ac: 1, ag: 1, at: 3, ca: 2, cc: 0, cg: 1, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chr2:171859093-171859380 (-) gagcctgagagatgaagatcagcctgagcaacatggcaaaaccccatctctgcataaaaatacaaaaattagccaaatgtggtggcacacacctgtaatcccagctacacaggaggctgagacaagaggatcatcgcttgagcctgggatgtggagattgcagtaagcccagattgcaccacagcacttcagcctgggtaacagagtgagaacatgtctcaaaagaaaaggacaaagaaaatgcagctttctgggcgcatgatacccacagactgtaatgtgatttta >DW419827:15-302 (+) gggcctgagagatggagatcagcctgagcagcatggcgaaaccccgtctctgcataagggtacaggaattggccgggtgtggtggcacacacctgtggtcccggctacacaggaggctgagacaagaggatcatcgcttgagcctgggatgtggagattgcagtgggcccagattgcaccacagcacttcagcctgggtaacagagtgagaacatgtctcacaagaaaaggacaaagaaaatgcagctttctgggcgcatgatacccacagactgtaatgtgatttta End editing Edited EST: DW425961, type: ag Aligns to: chr2:128092368-128092643 (-+) All mismatches: ag (15), ag (16), ag (34), ag (65), ag (70), ag (73), ag (79), at (84), ag (86), ag (108), ag (109), ag (110), ag (111), ag (128), ag (136), ag (166), ag (193), ag (208), ag (229), ag (250), ag (252), ag (270), Editing mismatches: 21, all mismatches: 22, alignment length: 274, cluster length: 257, total number of As: 73 Locations in RNA: 15 16 34 65 70 73 79 86 108 109 110 111 128 136 166 193 208 229 250 252 270 Locations in genome: 128092637 128092635 128092617 128092586 128092581 128092578 128092572 128092565 128092543 128092542 128092541 128092540 128092523 128092515 128092485 128092458 128092443 128092422 128092401 128092399 128092381 Upstream nucleotide (in genome): g c t c c a a c t a a a a a t t a a t c g Upstream nucleotide summary: a: 9, c: 5, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): c t a g c g g a a a a c a a g g c t c c g Downstream nucleotide summary: a: 7, c: 6, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 4, ac: 2, ag: 2, at: 1, ca: 1, cc: 2, cg: 1, ct: 1, ga: 0, gc: 1, gg: 1, gt: 0, ta: 2, tc: 1, tg: 2, tt: 0, other: 0 >chr2:128092368-128092643 (-) ggccagacatggttgctcacgcttgtaatcccagtactttgggaggcagaggtgggcagatcacaaggtcaagagaacaagaccattctggccaagtggtaaaaccccatctctactaaaaatacaaaaattagctgagcgtggtgacgtgcacctgtagttccagctacctgggaggctgaggtaggagaatcgcttgaacccgggaggcagaggttgcaatgagctgataccgcgtcactacactccagcctggtgacagagcgagactccgtc >DW425961:10-283 (+) ggcc-gg-gtggttgctcacgcttgtgatcccagtactttgggaggcagaggtgggcggatcgcagggtcaggagatcgagaccattctggccaagtggtggggccccatctctactaaagatacaaagattagctgagcgtggtgacgtgcacctgtggttccagctacctgggaggctgaggtgggagaatcgcttgagcccgggaggcagaggttgcagtgagctgataccgcgtcactgcgctccagcctggtgacagggcgagactccgtc End editing Edited EST: DW427135, type: ag Aligns to: chr2:63316322-63316588 (-+) All mismatches: ag (15), ag (16), ag (28), ag (29), ag (37), ag (38), ag (46), ag (47), ag (55), ag (59), ag (68), ag (71), ag (81), ag (93), ag (117), ag (122), ag (141), ag (147), ct (155), ag (176), ag (179), ag (180), ag (182), ag (190), ag (191), ag (199), ag (212), ag (244), ag (247), ag (248), ag (251), Editing mismatches: 30, all mismatches: 31, alignment length: 267, cluster length: 237, total number of As: 90 Locations in RNA: 15 16 28 29 37 38 46 47 55 59 68 71 81 93 117 122 141 147 176 179 180 182 190 191 199 212 244 247 248 251 Locations in genome: 63316587 63316586 63316574 63316573 63316565 63316564 63316556 63316555 63316547 63316543 63316534 63316531 63316521 63316509 63316485 63316480 63316461 63316455 63316426 63316423 63316422 63316420 63316412 63316411 63316403 63316390 63316358 63316355 63316354 63316351 Upstream nucleotide (in genome): g a c a c a t a t a t a a a a a a a a c a t a a t a t c a g Upstream nucleotide summary: a: 18, c: 4, g: 2, t: 6, other: 0 Downstream nucleotide (in genome): a c a t a a a a g t c g g g t t a g t a t t a t g t c a t c Downstream nucleotide summary: a: 10, c: 4, g: 6, t: 10, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 4, at: 9, ca: 4, cc: 0, cg: 0, ct: 0, ga: 1, gc: 1, gg: 0, gt: 0, ta: 1, tc: 2, tg: 2, tt: 1, other: 0 >chr2:63316322-63316588 (-) gaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggacgtgaaggacctcttcaaggagaactacgaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaatgttccgtgctcatgggtaggaagaatcaatatcgtgaaaatggccatagtgcccaaggtaatttatagattcaatgtcatccccatcctgctaccaatgactttcttcacagaattggaaaaaactact >DW427135:14-280 (+) gggctcccattcacggttgcttcggagagaatggaatacctgggagtccaacttgcaggggacgtgagggacctcttcagggagaactacgaaccactgctcagtgaagtaaaagaggatacaaacagatggaggaatgtttcgtgctcatgggtaggaagagtcggtgtcgtgaaggtggccatggtgcccaaggtagtttatagattcaatgtcatccccatcctgctgccggtggctttcttcacagaattggaaaaaactact End editing Edited EST: DW466563, type: ag Aligns to: chr2:69550635-69550931 (-+) All mismatches: ag (16), ag (22), ag (32), ag (45), ag (65), ag (75), ag (83), ag (106), ag (173), ag (179), ag (182), ag (183), ag (197), ag (200), ag (214), ag (239), ct (290), Editing mismatches: 16, all mismatches: 17, alignment length: 294, cluster length: 227, total number of As: 63 Locations in RNA: 16 22 32 45 65 75 83 106 173 179 182 183 197 200 214 239 Locations in genome: 69550929 69550923 69550913 69550900 69550880 69550870 69550862 69550839 69550769 69550763 69550760 69550759 69550745 69550742 69550728 69550703 Upstream nucleotide (in genome): g g a c g c t c t c c a a t g g Upstream nucleotide summary: a: 3, c: 5, g: 5, t: 3, other: 0 Downstream nucleotide (in genome): g g t g g c c a g g a c g g g g Downstream nucleotide summary: a: 2, c: 3, g: 10, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 1, ca: 2, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 5, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr2:69550635-69550931 (-) ggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcagtgaggcgagatcacgccactacactccagcctggcgacagagcaagactctctcaaaaaaaaaaaaaaaaaattttttttttaaatgggctgggcatggtggcttgtgcctgtagtctcagcaacttgggaggcttaagtagtaggatcgcttgagcctgggaggttgaggctgcagtgagctgtgattgtgccactgtgcttcagcttgagtgacagagtgagaccctcctgactcaaaacaaaaaa >DW466563:14-307 (+) gggggctggggcaggagagtcgcttgaacccgggaggcggaggttgcagtggggcgagatcgcgccactgcactccagcctggcgacagagcgagactctctcaaaaaaaaaaaaaaa---ttttttttttaaatgggctgggcatggtggcttgtgcctgtggtctcggcggcttgggaggcttaggtggtaggatcgcttgggcctgggaggttgaggctgcagtgggctgtgattgtgccactgtgcttcagcttgagtgacagagtgagaccctcttgactcaaaacaaaaaa End editing Edited EST: EB385665, type: ag Aligns to: chr2:25627840-25628488 (-+) All mismatches: ag (118), ag (143), ag (156), ag (161), ag (162), ag (179), ag (188), ag (223), ag (228), ag (236), ag (259), ag (314), ag (322), ag (330), ag (406), ag (417), ag (419), ag (420), ag (425), ag (434), ag (437), ag (446), ag (496), ag (497), ag (504), ag (510), ag (513), ag (514), ag (521), ag (532), ag (552), ag (584), ag (604), Editing mismatches: 33, all mismatches: 33, alignment length: 649, cluster length: 487, total number of As: 119 Locations in RNA: 118 143 156 161 162 179 188 223 228 236 259 314 322 330 406 417 419 420 425 434 437 446 496 497 504 510 513 514 521 532 552 584 604 Locations in genome: 25628371 25628346 25628333 25628328 25628327 25628310 25628301 25628266 25628261 25628253 25628230 25628175 25628167 25628159 25628083 25628072 25628070 25628069 25628064 25628055 25628052 25628043 25627993 25627992 25627985 25627979 25627976 25627975 25627968 25627957 25627937 25627905 25627885 Upstream nucleotide (in genome): c a c c a c g c a t c c c c t t t a c g a c c a c t a a c c c c g Upstream nucleotide summary: a: 8, c: 17, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): g c g a g g g g t t c g a g g t a t g g g g a a t c a a g g g g g Downstream nucleotide summary: a: 7, c: 3, g: 18, t: 5, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 2, at: 2, ca: 3, cc: 1, cg: 12, ct: 1, ga: 0, gc: 0, gg: 3, gt: 0, ta: 1, tc: 1, tg: 1, tt: 2, other: 0 >chr2:25627840-25628488 (-) gaaaaaaaaaacaacaacaaaacaaaaagcaaaactggtggtggaaaaaaaatagaacattttatttatttatttatttagagatggagtcttgttctgtcacccagggtggagtgcagtggcacaatcttggctctctacaacctccgtttcccagttcaagtgattctcctgcctcagccccccgagtagctgggattacaggtgcccgcagccacaaccagctaatttttgtatttttagtagagacggggtttcaccatgttggtcaggctggtcttgaactcctgacctcaagtgatctgcccgcctcagcctcccaaagtgccagaattacaggcgtgagccaccacaccccgccagaacattttatttttaatggtggttagtcgggccaggcatggtagctcacgcctataatcccagcactttgagaagccgaggcagatggatcacttgagcccaggcatttgaaatcagcctgggcaacatggcaaaatttcatctctacaaaaaatacagtaattagccaggcatggtgtcagctacccaggaggctgaggtgggaggattacttgagcccaggaggtcaaggctgtggtgagccatgatcttgccactgcactccagcctgagtgcactccagaca >EB385665:1-649 (+) gaaaaaaaaaacaacaacaaaacaaaaagcaaaactggtggtggaaaaaaaatagaacattttatttatttatttatttagagatggagtcttgttctgtcacccagggtggagtgcggtggcacaatcttggctctctacagcctccgtttcccggttcgggtgattctcctgcctcggccccccgggtagctgggattacaggtgcccgcagccacaaccggctagtttttgtgtttttagtagagacggggtttcgccatgttggtcaggctggtcttgaactcctgacctcaagtgatctgcccgcctcggcctcccgaagtgccggaattacaggcgtgagccaccacaccccgccagaacattttatttttaatggtggttagtcgggccaggcatggtggctcacgcctgtggtcccggcactttgggaggccgaggcggatggatcacttgagcccaggcatttgaaatcagcctgggcaacatggcggaatttcgtctctgcaggaaatacggtaattagccgggcatggtgtcagctacccgggaggctgaggtgggaggattacttgagcccgggaggtcaaggctgtggtgggccatgatcttgccactgcactccagcctgagtgcactccagaca End editing Edited EST: BJ995218, type: ag Aligns to: chr2:114465043-114465438 (-+) All mismatches: ag (143), ag (148), tc (151), ct (153), ag (171), ag (193), ag (211), ag (216), ag (224), ag (225), ag (226), ag (236), ag (239), ag (240), ag (249), ag (261), ag (264), ag (265), ag (273), ag (275), ag (276), ag (280), ag (284), ag (288), ag (306), ag (312), ag (316), ag (323), ag (329), ag (333), ag (336), ag (339), ag (347), ag (348), ag (353), ag (372), ag (377), ag (382), ag (384), ag (392), ag (409), ag (411), ag (415), ag (444), Editing mismatches: 42, all mismatches: 44, alignment length: 396, cluster length: 302, total number of As: 91 Locations in RNA: 143 148 171 193 211 216 224 225 226 236 239 240 249 261 264 265 273 275 276 280 284 288 306 312 316 323 329 333 336 339 347 348 353 372 377 382 384 392 409 411 415 444 Locations in genome: 114465438 114465433 114465410 114465388 114465370 114465365 114465357 114465356 114465355 114465345 114465342 114465341 114465332 114465320 114465317 114465316 114465308 114465306 114465305 114465301 114465297 114465293 114465275 114465269 114465265 114465258 114465252 114465248 114465245 114465242 114465234 114465233 114465228 114465209 114465204 114465199 114465197 114465189 114465172 114465170 114465166 114465137 Upstream nucleotide (in genome): n c a g g t c a a g c a a t t a a a a t c c t c t g g t g a g a a g g c c c c g g a Upstream nucleotide summary: a: 13, c: 10, g: 11, t: 7, other: 1 Downstream nucleotide (in genome): g g t g g g a a a c a c a c a a a a a g g t g g c g g g g t a c g g g c c c g g g a Downstream nucleotide summary: a: 12, c: 8, g: 19, t: 3, other: 0 Dinucleotide summary: aa: 8, ac: 2, ag: 1, at: 2, ca: 2, cc: 3, cg: 4, ct: 1, ga: 1, gc: 1, gg: 9, gt: 0, ta: 1, tc: 2, tg: 4, tt: 0, other: 1 >chr2:114465043-114465438 (-) aggccaggtgcggtggctcacacctgtaatcccagcactttgggagtccgaggcgggtggatcacctgagattaggagttcaaaaccagtgtgaccaacatggagaaaccccttctctactaaaaatacaaaaaattagccaggcatggtggtgcacgcctgtagtcccagctacttgtgaggctgaggtaggagaatcgcttgaacccaagaggcagaggttgcagtgagctgagatcacaccactgcactccagcctgggtgacagagcgagaccctgtttcaaaaaaataagaaataaaaagtgagtcttcatattcaaattagtatatgaggttaggcaacaattcttatatgggaccaggtatatttaatttgcctttctttgcagtcatc >BJ995218:143-538 (+) gggccgggcgtggtggctcacacctgtagtcccagcactttgggagtccggggcgggtggatcacctgggattgggagttcgggaccagtgtggccggcatggagagaccccttctctgctggaaatacagaggattggccgggcgtggtggtgcacgcctgtggtcccggctgcttgtggggctggggtgggggagtcgcttgggcccaggaggcagaggttgcagtgggctgggatcgcgccactgcgctccagcctgggtgacggggcgggaccctgtttcaaaaaaataagaaataagaagtgagtcttcatattcaaattagtatatgaggttaggcaacaattcttatatgggaccaggtatatttaatttgcctttctttgcagtcatc End editing Edited EST: BF055423, type: ga Aligns to: chr2:231913974-231914415 (-+) All mismatches: ga (38), ga (57), ga (83), ga (98), ga (100), ga (107), ga (136), gc (185), ga (250), ga (287), ga (290), ga (301), ga (316), ga (319), ga (345), gc (348), ga (351), ga (353), ga (369), ga (389), ga (409), ga (412), ga (425), Editing mismatches: 21, all mismatches: 23, alignment length: 442, cluster length: 388, total number of Gs: 80 Locations in RNA: 38 57 83 98 100 107 136 250 287 290 301 316 319 345 351 353 369 389 409 412 425 Locations in genome: 231914381 231914362 231914336 231914321 231914319 231914312 231914283 231914169 231914132 231914129 231914118 231914103 231914100 231914074 231914068 231914066 231914050 231914030 231914010 231914007 231913994 Upstream nucleotide (in genome): a a a c a a c a a a a c t a t a c a t a t Upstream nucleotide summary: a: 13, c: 4, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a a a a a a a a a a a a a a a a t a a a a Downstream nucleotide summary: a: 20, c: 0, g: 0, t: 1, other: 0 Dinucleotide summary: aa: 13, ac: 0, ag: 0, at: 0, ca: 3, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 4, tc: 0, tg: 0, tt: 0, other: 0 >chr2:231913974-231914415 (-) tcaacgaggtacttcttggttttattagatatgagaattatcaattcaagtcagaagtgccacaaccactgccatattagaaagattagtacccgagagcccagactgtcacccggctggaggcctctcgccgatggctcccagggaccactgacctaatcaagggcctcctccttcacacgccaccctccaccccaacccctttatgccttcttaaagtccttcagggaggggacccaccatcaagattgtcctttctggcacctaactcttctgtctgctagaagacagcaatgagactgtccctacaacgatgatgcttatggtggccacatctcaaagaagctgagagggatctcagccccgtattgtcacttgggaggcagaacccaaatcttagtaaatgaagactttctctcttgaaccattcacaggaatactg >BF055423:4-445 (+) tcaacgaggtacttcttggttttattagatatgaaaattatcaattcaagtcaaaagtgccacaaccactgccatattaaaaagattagtacccaaaagcccaaactgtcacccggctggaggcctctcgccaatggctcccagggaccactgacctaatcaagggcctcctccttcacaccccaccctccaccccaacccctttatgccttcttaaagtccttcagggaggggacccaccatcaaaattgtcctttctggcacctaactcttctgtctgctaaaaaacancaatgaaactgtccctacaacaataatgcttatggtggccacatctcaaaaaacctaaaagggatctcanccccatattgtcacttgggaggcaaaacccaaatcttantaaataaaaactttctctcttaaaccattcacaggaatactg End editing Edited EST: BF674933, type: ag Aligns to: chr2:101839442-101839744 (-+) All mismatches: ag (61), ag (90), ag (103), ag (113), ag (118), ag (121), ag (125), ag (132), ag (154), ag (177), ag (183), ag (184), ag (187), ag (190), ag (210), ag (225), ag (232), ca (296), Editing mismatches: 17, all mismatches: 18, alignment length: 302, cluster length: 173, total number of As: 52 Locations in RNA: 61 90 103 113 118 121 125 132 154 177 183 184 187 190 210 225 232 Locations in genome: 101839683 101839653 101839640 101839630 101839625 101839622 101839618 101839611 101839589 101839566 101839560 101839559 101839556 101839553 101839533 101839518 101839511 Upstream nucleotide (in genome): a t c a t a a c t g c a a c a g c Upstream nucleotide summary: a: 7, c: 5, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g t t a c a t g g g a g t c g g c Downstream nucleotide summary: a: 3, c: 3, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 3, at: 2, ca: 1, cc: 2, cg: 1, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 1, tg: 1, tt: 1, other: 0 >chr2:101839442-101839744 (-) cacagtggctcacgcctgtaatcccagcactttgggaggctgaggcaggcagatcacttgaagtcaggagttcgagaacagcctggccaatatggtgaaaccccatctctactaaaaatacaaaaaattagccaggcctggtggcttatgcctgtagtcccagctacttgggaggctgaggcacaagaatcacttgaactcgggaggtggaagttgcagtgagctgagatcacaccactgcactccagcctgggcaacagagtgagact-tggtcttgaataattaaaaaaaaaaaacaaaaaa >BF674933:1-302 (+) cacagtggctcacgcctgtaatcccagcac-ttgggaggctgaggcaggcagatcacttgaggtcaggagttcgagaacagcctgg-caatgtggtgaaaccccgtctctactagaaatgcagaaagttagccgggcctggtggcttatgcctgtggtcccagctacttgggaggctggggcacgggagtcgcttgaactcgggaggtggaggttgcagtgagctgggatcacgccactgcactccagcctgggcaacagagtgagactgtggtcttgaataattaaaaaaaaaaaaaaaaaaa End editing Edited EST: AI301628, type: ag Aligns to: chr2:85544887-85545280 (-+) All mismatches: ag (160), ag (170), ag (181), ag (197), ag (207), ag (221), ag (231), ag (250), ag (256), ag (257), ag (283), ag (286), ag (296), ag (298), ag (318), ag (331), ag (337), ag (366), ag (377), ag (392), Editing mismatches: 20, all mismatches: 20, alignment length: 394, cluster length: 233, total number of As: 42 Locations in RNA: 160 170 181 197 207 221 231 250 256 257 283 286 296 298 318 331 337 366 377 392 Locations in genome: 85545121 85545111 85545100 85545084 85545074 85545060 85545050 85545031 85545025 85545024 85544998 85544995 85544985 85544983 85544963 85544950 85544944 85544915 85544904 85544889 Upstream nucleotide (in genome): t t c c g g c c c a g t t c c c t c c g Upstream nucleotide summary: a: 1, c: 10, g: 4, t: 5, other: 0 Downstream nucleotide (in genome): t t g c g t c g a g g g c g g t g g a t Downstream nucleotide summary: a: 2, c: 3, g: 10, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 2, cc: 2, cg: 5, ct: 1, ga: 0, gc: 0, gg: 2, gt: 2, ta: 0, tc: 1, tg: 2, tt: 2, other: 0 >chr2:85544887-85545280 (-) aaagcttgttgtggtctaatgagaagtatttttcagtgcataatgtttttctgagcttctgtaaatgccatcccaatgtggtttggttttgttgaacagaaaccaaaataaatttcaaaatgttaaagcaatggatttaatacatttatttatttatttattttattttatttttgagacagagtcttgctctgtcaccaggctggagtgcagtggtatgatcttggctcactgcaacctccgcctcccaggttcaagcgattctcctgcctcagcctcccgagtagctgggactacaggtgcgtgccaccacgcccagctaatttttgcatttttagtggagacggggtttcaccatgttggccaggatggtctcaatctcttcttcgtgatc >AI301628:1-394 (+) aaagcttgttgtggtctaatgagaagtatttttcagtgcataatgtttttctgagcttctgtaaatgccatcccaatgtggtttggttttgttgaacagaaaccaaaataaatttcaaaatgttaaagcaatggatttaatacatttatttatttatttgttttattttgtttttgagacggagtcttgctctgtcgccaggctggggtgcagtggtatggtcttggctcgctgcaacctccgcctcccgggttcgggcgattctcctgcctcagcctcccgggtggctgggactgcgggtgcgtgccaccacgcccggctaatttttgcgttnttggtggagacggngtttcaccatgttggccgggatggtctcgatctcttcttcgtggtc End editing Edited EST: DW412140, type: ag Aligns to: chr3:119561809-119562120 (-+) All mismatches: ag (14), ag (15), ag (84), ag (93), ag (105), ag (108), ag (145), ag (159), ag (165), ag (168), ag (172), ag (179), ag (197), ag (207), ag (211), ag (223), ag (234), ag (275), ag (276), Editing mismatches: 19, all mismatches: 19, alignment length: 312, cluster length: 263, total number of As: 73 Locations in RNA: 14 15 84 93 105 108 145 159 165 168 172 179 197 207 211 223 234 275 276 Locations in genome: 119562120 119562119 119562050 119562041 119562029 119562026 119561989 119561975 119561969 119561966 119561962 119561955 119561937 119561927 119561923 119561911 119561900 119561859 119561858 Upstream nucleotide (in genome): n a g c c c c c g c a a a t c c a a a Upstream nucleotide summary: a: 7, c: 8, g: 2, t: 1, other: 1 Downstream nucleotide (in genome): a t t c g c g g c a g c t g g g t a c Downstream nucleotide summary: a: 3, c: 5, g: 7, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 3, ca: 1, cc: 2, cg: 5, ct: 0, ga: 0, gc: 1, gg: 0, gt: 1, ta: 0, tc: 0, tg: 1, tt: 0, other: 1 >chr3:119561809-119562120 (-) aatgccacagcagcgtcaggtaagaacgttctaagtctcttctataaaaacatattctgggctgggcatgatggctcacacctgtaatcccagcactttgggaggccgaggtgggtggatcacctgaggtcaggagtttgagaccagcctgaccaacaaggtgaaaccttgtctctactaaaaataaaaacttagccaggtgtggtggcaggtgcctgtaatcccagcttctggggaggctgagacaggagaattgcttgaaaccgggaggcggaggttgcattgagccgagattgcgccactgcactccag >DW412140:14-325 (+) ggtgccacagcagcgtcaggtaagaacgttctaagtctcttctataaaaacatattctgggctgggcatggtggctcacgcctgtaatcccggcgctttgggaggccgaggtgggtggatcacctgaggtcgggagtttgagaccggcctggccgacagggtgaagccttgtctctactaaaagtaaaaacttggccgggtgtggtggcgggtgcctgtagtcccagcttctggggaggctgagacaggagaattgcttgaggccgggaggcggaggttgcattgagccgagattgcgccactgcactccag End editing Edited EST: DW412657, type: ag Aligns to: chr3:196215742-196216048 (-+) All mismatches: tc (51), ag (59), ag (65), ag (66), ag (74), ag (87), ag (111), ag (134), ag (144), ag (145), ag (163), ag (172), ag (175), ag (201), ag (202), ag (227), ag (231), ag (237), ag (246), ag (266), ag (285), ag (304), ag (313), Editing mismatches: 22, all mismatches: 23, alignment length: 307, cluster length: 255, total number of As: 65 Locations in RNA: 59 65 66 74 87 111 134 144 145 163 172 175 201 202 227 231 237 246 266 285 304 313 Locations in genome: 196216006 196216000 196215999 196215991 196215978 196215954 196215931 196215921 196215920 196215902 196215893 196215890 196215864 196215863 196215838 196215834 196215828 196215819 196215799 196215780 196215761 196215752 Upstream nucleotide (in genome): c t a c c c c a a a a t t a g c a a c c c a Upstream nucleotide summary: a: 9, c: 9, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): c a t c a g a a c t t g a t g g t c g c g g Downstream nucleotide summary: a: 5, c: 5, g: 7, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 5, ca: 2, cc: 3, cg: 4, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chr3:196215742-196216048 (-) ggcctcacaaaatggaattccaggccgggcgtggtggctcacacctgtaatcgcagcactttgggaggccaaggcgggtggatcacttgaggtcaggagctcgagaccagcctggccaatgtggtgaaaccctgactctaccaaaaatataaaaaattagctgggtgtggtggcgcatgcctgtaatcccagctgctcaggagaaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagtgagccgagactgtgccactgcactccagcctgggcagcagagcaaggctctgtct >DW412657:17-323 (+) ggcctcacaaaatggaattccaggccgggcgtggcggctcacgcctgtggtcgcagcgctttgggaggccgaggcgggtggatcacttgaggtcgggagctcgagaccagcctggccgatgtggtgaggccctgactctaccaaaagtataaaaagttggctgggtgtggtggcgcatgcctgtggtcccagctgctcaggagaaggctggggcgggagagtcgcttgagcctgggaggtggaggttgcggtgagccgagactgtgccgctgcactccagcctgggcggcagagcagggctctgtct End editing Edited EST: DW417320, type: ag Aligns to: chr3:57612876-57613166 (-+) All mismatches: ag (31), ag (39), ag (56), ag (61), ag (70), ag (80), ag (94), ag (99), ag (130), ag (134), ag (136), ag (137), ag (148), ag (156), ag (164), ag (174), ag (175), ag (184), ag (206), ag (215), ag (216), ag (250), ag (252), Editing mismatches: 23, all mismatches: 23, alignment length: 290, cluster length: 222, total number of As: 62 Locations in RNA: 31 39 56 61 70 80 94 99 130 134 136 137 148 156 164 174 175 184 206 215 216 250 252 Locations in genome: 57613152 57613144 57613127 57613122 57613113 57613103 57613089 57613084 57613053 57613049 57613047 57613046 57613035 57613027 57613019 57613009 57613008 57612999 57612977 57612968 57612967 57612933 57612931 Upstream nucleotide (in genome): c t g c c a a c t a a a t c c t a t g g a t c Upstream nucleotide summary: a: 7, c: 7, g: 3, t: 6, other: 0 Downstream nucleotide (in genome): c a g a g g g g g a a t g t c a t c a a c c c Downstream nucleotide summary: a: 7, c: 6, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 2, at: 2, ca: 1, cc: 3, cg: 2, ct: 1, ga: 2, gc: 0, gg: 1, gt: 0, ta: 2, tc: 2, tg: 2, tt: 0, other: 0 >chr3:57612876-57613166 (-) gggtgtggtggctcacgcctgtaatcctagcactttgggaggccaaggtggacaggtcacttaaggtcgagagtccaagaccagcctggccaacatggtgaaaccccgtctctagtaaaaatacaaaaattagccaggcatggtggcacgcgcctgtaatcccagctacttgggaggctgagatgtgagaatcacttgaacctgggaggcggaggttgcagtgagctgagattacacccctggactccagcttgggtgacacagtgagactgtgtctcaacaaaaataaaa >DW417320:17-306 (+) gggtgtggtggctcgcgcctgtgatcctagcactttggggggccgaggtggacgggtcacttagggtcgagagtccaggaccggcctggccaacatggtgaaaccccgtctctggtagaggtacaaaaattggccaggcgtggtggcgcgcgcctgtggtcccagctgcttgggaggctgagatgtgaggatcacttgggcctgggaggcggaggttgcagtgagctgagattgcgcccctggactccagcttgggtgacacagtgagactgtgtctcaacaaaaa-aaaa End editing Edited EST: DW421674, type: ag Aligns to: chr3:196221633-196221914 (-+) All mismatches: ag (16), ag (42), ag (62), ag (70), ag (119), ag (131), ag (136), ag (137), ag (148), ag (158), ag (160), ag (193), ag (216), ag (224), ag (228), ag (241), ag (254), Editing mismatches: 17, all mismatches: 17, alignment length: 282, cluster length: 239, total number of As: 52 Locations in RNA: 16 42 62 70 119 131 136 137 148 158 160 193 216 224 228 241 254 Locations in genome: 196221914 196221888 196221868 196221860 196221811 196221799 196221794 196221793 196221782 196221772 196221770 196221737 196221714 196221706 196221702 196221689 196221676 Upstream nucleotide (in genome): n c c a a c c a t c c t c t g a a Upstream nucleotide summary: a: 5, c: 7, g: 1, t: 3, other: 1 Downstream nucleotide (in genome): g g g t g c a c g c g t c c g c g Downstream nucleotide summary: a: 1, c: 6, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 2, at: 1, ca: 1, cc: 3, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 1, tt: 1, other: 1 >chr3:196221633-196221914 (-) agtttatgttattttattttcgagacagggtctcacttagtcgcccaggctggaatgccagggagcgatcttggctcactgtaccctccaccgcccgggctcaagcaatcctcccacctcaacctcctgagtagctgggaccacaggcacacaccactacgccaggctaatttttttattttttgtagagatagggtctcactatgttaccgaggctggtcttgaactcctgagctcaagtgatactcctgcctcatcctcgcaaagtgctgggatcacagg >DW421674:16-297 (+) ggtttatgttattttattttcgagacggggtctcacttagtcgcccgggctggagtgccagggagcgatcttggctcactgtaccctccaccgcccgggctcaggcaatcctcccgcctcggcctcctgagtggctgggaccgcgggcacacaccactacgccaggctaatttttttgttttttgtagagatagggtctcgctatgttgccggggctggtcttgagctcctgagctcaggtgatactcctgcctcatcctcgcaaagtgctgggatcacagg End editing Edited EST: DW425043, type: ag Aligns to: chr3:127307282-127307560 (-+) All mismatches: ag (10), gc (12), ag (15), ag (31), ag (32), ag (55), ag (67), ag (77), ag (86), ag (101), ag (167), ag (172), ag (199), ag (236), ag (237), ag (244), ag (247), ag (252), ag (262), ag (270), ag (271), ag (275), Editing mismatches: 21, all mismatches: 22, alignment length: 278, cluster length: 267, total number of As: 70 Locations in RNA: 10 15 31 32 55 67 77 86 101 167 172 199 236 237 244 247 252 262 270 271 275 Locations in genome: 127307559 127307553 127307537 127307536 127307513 127307501 127307491 127307482 127307467 127307401 127307396 127307369 127307332 127307331 127307324 127307321 127307316 127307306 127307298 127307297 127307293 Upstream nucleotide (in genome): c c t a a c c g a a c a c a c c c t a a g Upstream nucleotide summary: a: 8, c: 9, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): g g a t g t g g c t g t a g c t c g a g g Downstream nucleotide summary: a: 3, c: 3, g: 10, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 3, at: 3, ca: 1, cc: 2, cg: 4, ct: 2, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr3:127307282-127307560 (-) caggcgcagtggctcatgcctgtaatcgtagcactttgggaggctgaagtgggtggatcatctgaggtcaggagtttgagaccagcttggccaacatggtgaaaccccatttctactaaaaatacaaaaattagccgggtgtggtggtgcacacctgtaatcccagctactcaggaggctgaggcgggagaatcgcttgaatccaggaggcggaggttgcagtgacccaagatcgcaccattgcactccagcctaggtgacaaagcgagactctgtctc >DW425043:9-286 (+) cggccg-ggtggctcatgcctgtggtcgtagcactttgggaggctgaggtgggtggatcgtctgaggtcgggagtttgggaccagcttggccagcatggtgaaaccccatttctactaaaaatacaaaaattagccgggtgtggtggtgcacacctgtagtcccggctactcaggaggctgaggcgggagagtcgcttgaatccaggaggcggaggttgcagtgacccgggatcgcgccgttgcgctccagcctgggtgacagggcgggactctgtctc End editing Edited EST: DW428038, type: ag Aligns to: chr3:48796881-48797141 (-+) All mismatches: ag (65), ag (66), ag (71), ag (120), ag (125), ag (131), ag (134), ag (135), ag (137), ag (143), ag (145), ag (167), ag (170), ag (173), ag (189), ag (199), ag (200), ag (201), ag (206), ag (210), ag (214), ag (236), ag (246), ag (253), ag (256), ta (259), ag (266), ag (270), ag (271), Editing mismatches: 28, all mismatches: 29, alignment length: 261, cluster length: 207, total number of As: 61 Locations in RNA: 65 66 71 120 125 131 134 135 137 143 145 167 170 173 189 199 200 201 206 210 214 236 246 253 256 266 270 271 Locations in genome: 48797093 48797092 48797087 48797038 48797033 48797027 48797024 48797023 48797021 48797015 48797013 48796991 48796988 48796985 48796969 48796959 48796958 48796957 48796952 48796948 48796944 48796922 48796912 48796905 48796902 48796892 48796888 48796887 Upstream nucleotide (in genome): t a c g c g c a c g a c a t c t a a c t c c c t a g c a Upstream nucleotide summary: a: 8, c: 11, g: 4, t: 5, other: 0 Downstream nucleotide (in genome): a t g g g c a c t a c a t a c a a t g c g c g g g g a g Downstream nucleotide summary: a: 8, c: 6, g: 10, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 2, at: 3, ca: 3, cc: 2, cg: 5, ct: 1, ga: 1, gc: 1, gg: 2, gt: 0, ta: 3, tc: 1, tg: 1, tt: 0, other: 0 >chr3:48796881-48797141 (-) gaacttgaaaagcaggatacttggccgggcgcagtggctcatgcctgtaatcccagcacttagggaggccgaggcaggcggatcacctgaggttgggggttcgagaccagcctgaccaacatggagaaaccctgtctctactaaaaatacaaaattaactgaatgtggtggcacgtgcctgtaaatcccagctactcaggaggctgaggcaggagaatcacttgaacccaggaggtagaagttgtggtgagccaagatcgc >DW428038:17-277 (+) gaacttgaaaagcaggatacttggccgggcgcagtggctcatgcctgtggtcccggcacttagggaggccgaggcaggcggatcacctgaggttgggggttcgggaccggcctggccggcgtggaggagccctgtctctactaaaaatacgaagttgactgaatgtggtggcgcgtgcctgtgggtcccggctgctcgggaggctgaggcaggagaatcgcttgaacccgggaggtggaggtagtggtgggccgggatcgc End editing Edited EST: DW428516, type: ag Aligns to: chr3:125305377-125305632 (-+) All mismatches: ag (17), ag (18), ag (26), ag (35), ag (44), ag (81), ag (84), ag (90), ca (165), ag (171), ag (181), ag (190), ag (196), ag (216), ag (245), ag (263), Editing mismatches: 15, all mismatches: 16, alignment length: 256, cluster length: 247, total number of As: 70 Locations in RNA: 17 18 26 35 44 81 84 90 171 181 190 196 216 245 263 Locations in genome: 125305632 125305631 125305623 125305614 125305605 125305568 125305565 125305559 125305478 125305468 125305459 125305453 125305433 125305404 125305386 Upstream nucleotide (in genome): n a c a c g c g g c c a t c g Upstream nucleotide summary: a: 3, c: 6, g: 4, t: 1, other: 1 Downstream nucleotide (in genome): a t c g g c a t g g c c g g g Downstream nucleotide summary: a: 2, c: 4, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 1, ca: 1, cc: 2, cg: 3, ct: 0, ga: 0, gc: 1, gg: 2, gt: 1, ta: 0, tc: 0, tg: 1, tt: 0, other: 1 >chr3:125305377-125305632 (-) aatcccagcactttgggaagccgaggcaggcggatcacgaggtcaggagttcgagaccagcctgaccaacatgatgaaaccccgtctctactacaaatagaaaaagtagccaggcatggtggcacacacgcacctgtactcccagctactcgggaggctgaggcaggagaatcacttgaacacagcaggcggaggttgtagtgagccaagattgcaccactgctctccagcctgggtgacagagcgagactccatc >DW428516:17-272 (+) ggtcccagcgctttgggaggccgaggcgggcggatcacgaggtcaggagttcgagaccagcctggccgacatggtgaaaccccgtctctactacaaatagaaaaagtagccaggcatggtggcacacacgcacctgtactcccagctaatcggggggctgaggcgggagaatcgcttgagcacagcaggcggaggttgtggtgagccaagattgcaccactgctctccggcctgggtgacagagcgggactccatc End editing Edited EST: DW429795, type: ag Aligns to: chr3:155568657-155569036 (-+) All mismatches: ag (61), ag (67), ag (75), ag (92), ag (100), ag (106), ta (130), ag (135), ag (144), ag (150), ag (162), ag (185), ag (195), ag (202), ag (242), ag (264), ag (265), ag (277), ag (285), ag (286), ac (339), ag (366), ag (374), ag (375), ag (380), Editing mismatches: 23, all mismatches: 25, alignment length: 380, cluster length: 320, total number of As: 84 Locations in RNA: 61 67 75 92 100 106 135 144 150 162 185 195 202 242 264 265 277 285 286 366 374 375 380 Locations in genome: 155568992 155568986 155568978 155568961 155568953 155568947 155568918 155568909 155568903 155568891 155568868 155568858 155568851 155568811 155568789 155568788 155568776 155568768 155568767 155568687 155568679 155568678 155568673 Upstream nucleotide (in genome): c c c c t a t t c c t a c g a a t t a c t a c Upstream nucleotide summary: a: 6, c: 9, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): g g g c g g g c t c g g c t a g c a g c a t g Downstream nucleotide summary: a: 3, c: 6, g: 11, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 4, at: 1, ca: 0, cc: 4, cg: 4, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 2, tc: 2, tg: 3, tt: 0, other: 0 >chr3:155568657-155569036 (-) gtattttttatatggagtctccctctgacactagactggagtgcagtggcaggacctcagctcactgcgatttccacttctctagttcaagccattctcctgcctcagcctcctgagtagtgggattacaggcatgtgccaccacacccagctaatttttgtatttttagtacagacaaggtttcactgtgttggccaggatggtctcgatctcctgatcttgtgatccgcccacctcggcctcccaaagtgttgggattacaggcgtaagccactgcgcccagccaaaataaattaattaattaaaaataaaattaaaataaagaagtcaaggctggtgcagtggctcacgcctgtaatcccagcactttgggaggctg >DW429795:17-396 (+) gtattttttatatggagtctccctctgacactagactggagtgcggtggcgggacctcggctcactgcgatttccgcttctctggttcaggccattctcctgcctcagcctccagagtggtgggattgcaggcgtgtgccaccacgcccagctaatttttgtatttttggtacagacagggtttcgctgtgttggccaggatggtctcgatctcctgatcttgtggtccgcccacctcggcctcccagggtgttgggattgcaggcgtgggccactgcgcccagccaaaataaattaattaattaaaaataaaattaaaatacagaagtcaaggctggtgcagtggctcgcgcctgtggtcccggcactttgggaggctg End editing Edited EST: DW430024, type: ag Aligns to: chr3:140433166-140433543 (-+) All mismatches: ag (21), ag (36), ag (37), ag (57), ag (60), ag (61), ag (69), ag (82), ag (83), ag (96), ag (102), ag (104), ag (112), ag (122), ag (166), ag (231), ta (329), Editing mismatches: 16, all mismatches: 17, alignment length: 378, cluster length: 211, total number of As: 45 Locations in RNA: 21 36 37 57 60 61 69 82 83 96 102 104 112 122 166 231 Locations in genome: 140433537 140433522 140433521 140433501 140433498 140433497 140433489 140433476 140433475 140433462 140433456 140433454 140433446 140433436 140433392 140433327 Upstream nucleotide (in genome): a c a a c a g t a t c c c t t t Upstream nucleotide summary: a: 5, c: 5, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): t a c g a t c a g c c t c a g c Downstream nucleotide summary: a: 4, c: 6, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 2, ca: 2, cc: 2, cg: 0, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr3:140433166-140433543 (-) ggtgcaattttggctcactgcaacctctgcttcctgggcttaagcaatcctccgacctaatcctcctaagtagctgcgactacaggcacatgccaccacacccggctaatttttgtactttttgtagagataggattttgccatgttgcctaggctggccttgaactcctggactcaagctatctacccaccttggcctcccaaagtgctgggattacaggcgtgagccactgtttctggcctcaatcctttaaatgtatgaagatatcattatttaaataacaaagctcttaaatgggagagatctaggctgtttttattttatttttgttactttgaatacctttgcaataagcattcctgatatgtatctttata >DW430024:15-392 (+) ggtgcagttttggctcactgcggcctctgcttcctgggcttaggcggtcctccggcctaatcctcctgggtagctgcgactgcaggcgcgtgccaccgcacccggctgatttttgtactttttgtagagataggattttgccatgttgcctgggctggccttgaactcctggactcaagctatctacccaccttggcctcccaaagtgctgggattgcaggcgtgagccactgtttctggcctcaatcctttaaatgtatgaagatatcattatttaaataacaaagctcttaaatgggagagatctaggctgtatttattttatttttgttactttgaatacctttgcaataagcattcctgatatgtatctttata End editing Edited EST: DW436089, type: ag Aligns to: chr3:129012435-129012672 (-+) All mismatches: ag (16), ag (31), ag (73), ag (74), ag (82), ag (84), ag (99), ag (104), ag (113), ag (117), ag (129), ag (139), ag (140), ag (182), ag (198), ag (202), ag (207), ag (212), ag (214), ag (236), Editing mismatches: 20, all mismatches: 20, alignment length: 238, cluster length: 221, total number of As: 60 Locations in RNA: 16 31 73 74 82 84 99 104 113 117 129 139 140 182 198 202 207 212 214 236 Locations in genome: 129012672 129012657 129012615 129012614 129012606 129012604 129012589 129012584 129012575 129012571 129012559 129012549 129012548 129012506 129012490 129012486 129012481 129012476 129012474 129012452 Upstream nucleotide (in genome): n c t a g a a t t c c t a c c g a c c c Upstream nucleotide summary: a: 5, c: 8, g: 2, t: 4, other: 1 Downstream nucleotide (in genome): g g a c a c a c g g c a t g g g g c c a Downstream nucleotide summary: a: 5, c: 6, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 1, ca: 1, cc: 3, cg: 4, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 1 >chr3:129012435-129012672 (-) agggggtgctgaggcaggcggatcacctgaggtcaggagttagagaccagcctggctaacatggtgaaaccctgtctctactaaaaatacaaaaattagccagacatggtggcacgcacctgtaatcccggctattcaggcggccgaggcagaattgcttgaacccaggaggtggaggttgcagtgagctaagaccacaccattgcactccatcctgggcaacaagagtgaaactctg >DW436089:16-253 (+) ggggggtgctgaggcgggcggatcacctgaggtcaggagttagagaccagcctggctggcatggtggagccctgtctctactagaaatgcaaaaattggccggacatggtggcgcgcacctgtggtcccggctattcaggcggccgaggcagaattgcttgaacccgggaggtggaggttgcggtgggctaggaccgcgccattgcactccatcctgggcgacaagagtgaaactctg End editing Edited EST: DW465133, type: ag Aligns to: chr3:133370118-133370461 (-+) All mismatches: ag (171), ag (172), ag (195), ag (207), ag (212), ag (217), ag (241), ag (243), ag (249), ag (251), ag (265), ac (277), ag (283), ag (309), ag (310), ag (315), ag (326), ag (332), gc (337), ag (342), ag (345), ag (351), ag (355), Editing mismatches: 21, all mismatches: 23, alignment length: 344, cluster length: 185, total number of As: 52 Locations in RNA: 171 172 195 207 212 217 241 243 249 251 265 283 309 310 315 326 332 342 345 351 355 Locations in genome: 133370307 133370306 133370283 133370271 133370266 133370261 133370237 133370235 133370229 133370227 133370213 133370195 133370169 133370168 133370163 133370152 133370146 133370136 133370133 133370127 133370123 Upstream nucleotide (in genome): t a a t g c a c g a t t t a c g g a c a c Upstream nucleotide summary: a: 7, c: 5, g: 4, t: 5, other: 0 Downstream nucleotide (in genome): a t g c g g c t a c a g a t g g g t c c g Downstream nucleotide summary: a: 4, c: 5, g: 8, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 3, ag: 1, at: 3, ca: 0, cc: 1, cg: 3, ct: 1, ga: 1, gc: 0, gg: 3, gt: 0, ta: 3, tc: 1, tg: 1, tt: 0, other: 0 >chr3:133370118-133370461 (-) atactttttccgctgtcttagattggaatacttaatgtattcctatttgtagaatgacttggctgtgcactaattttcacagagtagcaaaaatttaaccctaccttattgttaagaagggaaattggagctgggcttggtggctcatgcctgtaatcccagcacttttgggaggccaaggtgggcagatacctgaggtcaggagttggagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaaaaattagctgggcgttgtggcaggcccctgtaatcccagctgcttgggaggctgaggtaggagaatcacttgaacccaggagg >DW465133:17-360 (+) atactttttccgctgtcttagattggaatacttaatgtattcctatttgtagaatgacttggctgtgcactaattttcacagagtagcaaaaatttaaccctaccttattgttaagaagggaaattggagctgggcttggtggctcatgcctgtggtcccagcacttttgggaggccagggtgggcagatgcctggggtcgggagttggagaccagcctggccagcgtggtggagccctgtctctactgaaaatacaaaacaaattggctgggcgttgtggcaggcccctgtggtcccggctgcttggggggctggggtacgagagtcgcttgagcccgggagg End editing Edited EST: BM692349, type: ag Aligns to: chr3:8270387-8270923 (-+) All mismatches: ag (167), ag (187), ag (205), ag (206), ag (207), ag (211), ag (228), ag (250), ag (252), ag (258), ag (280), ag (283), ag (294), ag (295), ct (445), Editing mismatches: 14, all mismatches: 15, alignment length: 537, cluster length: 129, total number of As: 62 Locations in RNA: 167 187 205 206 207 211 228 250 252 258 280 283 294 295 Locations in genome: 8270768 8270748 8270730 8270729 8270728 8270724 8270707 8270685 8270683 8270677 8270655 8270652 8270641 8270640 Upstream nucleotide (in genome): c a g a a a t a a t c a a a Upstream nucleotide summary: a: 9, c: 2, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g a a a a g g a g a g g a g Downstream nucleotide summary: a: 7, c: 0, g: 7, t: 0, other: 0 Dinucleotide summary: aa: 5, ac: 0, ag: 4, at: 0, ca: 0, cc: 0, cg: 2, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr3:8270387-8270923 (-) gaaataaatttaaaaatggaaattctcagaaaaaaatagaagttataggaaataatttaaaaaattacagaactgaaaactgcaattaaaaaaatcgaaaccttctgaatgggctaagcagtagagtggaggatagaatcagttaagttgagcacagatccactcaatctgaacaaaaagagaaaacagactgaaaaaaagtatgaatagagctttaggaatctgtacattaaaaacaaaagatctaatattttatcattggaatctcagaagcagaggagaaagagagtgatgctgaatgattgttcaaaggaatagttgttgaaaacttttctaatatggcaaagacataaatctaaagatctaagaaactgagtaaacctcaaataggataaacccaaagaaatccacacaccaaaatacagcttaattacacgtttgaaagctaaatacaaagaaaaaacactgaatgcagccagggagagatagaatgcataacctacatggaaacacatattcactgtagatttcttgtcc >BM692349:12-548 (+) gaaataaatttaaaaatggaaattctcagaaaaaaatagaagttataggaaataatttaaaaaattacagaactgaaaactgcaattaaaaaaatcgaaaccttctgaatgggctaagcagtagagtggaggatagaatcagttaagttgagcacggatccactcaatctgaacagaaagagaaaacagactggggaaaggtatgaatagagctttgggaatctgtacattaaaaacagaggatctgatattttatcattggaatctcggaggcagaggagagggagagtgatgctgaatgattgttcaaaggaatagttgttgaaaacttttctaatatggcaaagacataaatctaaagatctaagaaactgagtaaacctcaaataggataaacccaaagaaatccacacaccaaaatacagcttaattatacgtttgaaagctaaatacaaagaaaaaacactgaatgcagccagggagagatagaatgcataacctacatggaaacacatattcactgtagatttcttgtcc End editing Edited EST: BE045397, type: ga Aligns to: chr3:12939387-12939833 (-+) All mismatches: ga (134), ga (163), ga (186), ga (188), ga (190), ga (195), ga (199), ga (202), ga (205), ga (211), ac (218), ga (219), ga (220), ga (223), ga (227), ga (231), ga (232), ga (247), ga (249), ga (253), ga (259), ga (260), ct (288), ga (290), ga (308), ga (311), ga (315), ga (321), ga (327), ga (330), ga (332), ga (343), ga (344), ga (351), ga (367), ga (369), ga (386), ga (392), ga (414), ga (419), ga (429), Editing mismatches: 39, all mismatches: 41, alignment length: 447, cluster length: 296, total number of Gs: 75 Locations in RNA: 134 163 186 188 190 195 199 202 205 211 219 220 223 227 231 232 247 249 253 259 260 290 308 311 315 321 327 330 332 343 344 351 367 369 386 392 414 419 429 Locations in genome: 12939700 12939671 12939648 12939646 12939644 12939639 12939635 12939632 12939629 12939623 12939615 12939614 12939611 12939607 12939603 12939602 12939587 12939585 12939581 12939575 12939574 12939544 12939526 12939523 12939519 12939513 12939507 12939504 12939502 12939491 12939490 12939483 12939467 12939465 12939448 12939442 12939420 12939415 12939405 Upstream nucleotide (in genome): a c t g a a a a a a a g t t t g t a c t g t t t a a c t a t g t t g t t t t t Upstream nucleotide summary: a: 12, c: 3, g: 6, t: 18, other: 0 Downstream nucleotide (in genome): a g g a g g g g g g g a t c g t a g c g c c c a g g c a g g c a g a t t a t t Downstream nucleotide summary: a: 9, c: 7, g: 17, t: 6, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 11, at: 0, ca: 0, cc: 2, cg: 1, ct: 0, ga: 3, gc: 2, gg: 0, gt: 1, ta: 5, tc: 3, tg: 5, tt: 5, other: 0 >chr3:12939387-12939833 (-) tatcaaaagtttgtggaagatacattgttgggttccagaggctggagtcatgctgcccacatcttgtttgggaaagcaaaagctcccagtgagctggtgtccccgtgtgtctttcatgggactgtcccctttagagatcccacctgtcagagccacagcttcggggtcctgtcatcacatcccctgggaggggaggcaggaggaggccgagggccccaggatgtctgcctggtcccttctcactgtgaggacgcccttggcacacctttctcaagtcacacaaattactgcagttacatacagaattgctgacaggagcaggagacgctgagggaaacagctggcaatgtgacaaaagtcttttctgggacaacaatcaaatcatgtatttgtatttttttaagtttaccaatgaattgtacaacaatgtaaaaataaagttcatcc >BE045397:1-447 (+) tatcaaaagtttgtggaagatacattgttgggttccagaggctggagtcatgctgcccacatcttgtttgggaaagcaaaagctcccantgagctggtgtccccgtgtgtctttcatgggactgtcccctttaaagatcccacctgtcagagccacancttcagggtcctgtcatcacatcccctagaaagggaagcaagaagaagccnaaggcccccaaatatctacctaatcccttctcactgtaaagacacccttaacacacctttctcaagtcacacaaattattacagttacatacanaattactaacaagagcaaganacactaaaggaaacagctaacaatgtaacaaaantcttttctagaacaacaatcaaatcatatatttatatttttttaagtttaccaataaattatacaacaatataaaaataaagttcatcc End editing Edited EST: AA665426, type: ag Aligns to: chr3:106520733-106521073 (-+) All mismatches: ag (75), ag (76), ag (81), ag (82), gt (90), ag (119), ag (127), ag (143), ag (145), ag (151), ag (164), ag (167), ag (173), ag (178), ag (179), ag (182), ag (186), ag (208), ag (209), ag (218), ag (250), ag (257), ag (274), ga (339), Editing mismatches: 22, all mismatches: 24, alignment length: 341, cluster length: 200, total number of As: 54 Locations in RNA: 75 76 81 82 119 127 143 145 151 164 167 173 178 179 182 186 208 209 218 250 257 274 Locations in genome: 106521001 106521000 106520995 106520994 106520957 106520949 106520933 106520931 106520925 106520912 106520909 106520903 106520898 106520897 106520894 106520890 106520868 106520867 106520858 106520826 106520819 106520802 Upstream nucleotide (in genome): t a c a c c a c g t t t a a t c t a t c a g Upstream nucleotide summary: a: 7, c: 6, g: 2, t: 7, other: 0 Downstream nucleotide (in genome): a t a c g a c t a c a c a t g g a t c c g g Downstream nucleotide summary: a: 7, c: 6, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 3, ca: 2, cc: 1, cg: 2, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 3, tc: 3, tg: 1, tt: 0, other: 0 >chr3:106520733-106521073 (-) gccctaatccagtctgattagtgggcttgtaaaatgtgaaaatttaggccgg-gcacggtggctcgcgcctgtaatcccaacactttgggaggccaaggtgggcagatcacaaggtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccaggtgtggtggtgtgtgcctgtaatcccagctactcgggaggttcaggcaggagaattgcttgcacctggaaggtgggggttgcagtgagctgacattatgccactgctctctagcctgggcaacaagagtgaaactccgtctcaaaaaaaaagaaaa >AA665426:3-343 (+) gccctaatccagtctgattagtgggcttgtaaaatgtgaaaatttagg-cggtgcacggtggctcgcgcctgtggtcccggcactttgtgaggccaaggtgggcagatcacaaggtcgggagttcgagaccagcctggccagcgtggtggaaccccgtctctgctgaaaatgcaaaggttggccgggtgtggtggtgtgtgcctgtggtcccagctgctcgggaggttcaggcaggagaattgcttgcgcctggagggtgggggttgcagtgggctgacattatgccactgctctctagcctgggcaacaagagtgaaactccgtctcaaaaaaaaaaaaaa End editing Edited EST: DB133964, type: ag Aligns to: chr4:68341226-68341769 (-+) All mismatches: ct (172), ag (185), ag (192), ag (214), ag (222), ag (227), ag (257), ag (277), ag (280), ag (285), ag (290), ag (294), ag (326), ag (330), ag (354), ag (387), Editing mismatches: 15, all mismatches: 16, alignment length: 545, cluster length: 203, total number of As: 56 Locations in RNA: 185 192 214 222 227 257 277 280 285 290 294 326 330 354 387 Locations in genome: 68341586 68341579 68341557 68341549 68341544 68341514 68341494 68341491 68341486 68341481 68341477 68341445 68341441 68341417 68341384 Upstream nucleotide (in genome): c a g c c a t a a t c t c c g Upstream nucleotide summary: a: 4, c: 6, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): c t g g c c c a a g g c g t g Downstream nucleotide summary: a: 2, c: 5, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 1, ca: 0, cc: 2, cg: 3, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 2, tg: 1, tt: 0, other: 0 >chr4:68341226-68341769 (-) ttcactgggacatcatgatggctgtgaggtcactaggcaatacgattttttaaatgccattgtaaccttataggaccactatcatgtaggcagtttgctgttgactgaaacatcgttaggcagtgcatgactgtatcacaaatttaatggcttaatactcttgggctgggcgcggtggctcacacctgtaatcccagcactttgggaggccgaggcgggcagatcaccaggtcaggagatcgagaccatggtgaaaccccgtctctactaaaaatacaaaaaaaaattagccaggcgcgatggcgggcgcctgtagtcccagctactcaggaggctgaggctggagaatggcatgaaccctggaggcggagcttgcagtgagccgagatcgcctcactgtactccagcctggatgacagagtgagactccatctcaaaaaa-caagaaacaatactcttgtattatctatctcacagttatgtagagagaaccatgagcttgaccaggtattctctttagagtattacaagactggaatcaagat >DB133964:2-546 (+) ttcactgggacatcatgatggctgtgaggtcactaggcaatacgattttttaaatgccattgtaaccttataggaccactatcatgtaggcagtttgctgttgactgaaacatcgttaggcagtgcatgactgtatcacaaatttaatggcttaatactcttgggctgggtgcggtggctcacgcctgtagtcccagcactttgggaggccggggcgggcggatcgccaggtcaggagatcgagaccatggtgaagccccgtctctactaaaaatgcagaaaagaattggccgggcgcgatggcgggcgcctgtagtcccagctgctcgggaggctgaggctggagaatggcgtgaaccctggaggcggagcttgcagtgagccgggatcgcctcactgtactccagcctggatgacagagtgagactccatctcaaaaaaacaagaaacaatactcttgtattatctatctcacagttatgtagagagaaccatgagcttgaccaggtattctctttagagtattacaagactggaatcaagat End editing Edited EST: DB286688, type: ag Aligns to: chr4:77827443-77827981 (-+) All mismatches: ag (104), ag (113), ag (129), ag (141), ag (147), ag (321), ag (347), ag (359), ag (381), ag (385), ag (386), ag (389), ag (396), ag (414), ag (420), ag (440), ag (441), ag (454), ag (457), Editing mismatches: 19, all mismatches: 19, alignment length: 539, cluster length: 354, total number of As: 71 Locations in RNA: 104 113 129 141 147 321 347 359 381 385 386 389 396 414 420 440 441 454 457 Locations in genome: 77827878 77827869 77827853 77827841 77827835 77827661 77827635 77827623 77827601 77827597 77827596 77827593 77827586 77827568 77827562 77827542 77827541 77827528 77827525 Upstream nucleotide (in genome): t t a a a g c a a c a c c a t a a t a Upstream nucleotide summary: a: 10, c: 4, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g t t t t g c g g a g g g a c a c t a Downstream nucleotide summary: a: 4, c: 3, g: 7, t: 5, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 3, at: 3, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 1, tt: 2, other: 0 >chr4:77827443-77827981 (-) attcaaatataacatttccaaaatgggatgcttgacttcctgctcccaaaccagttcttcctgcaatattctcaatcttggtaaacttatatccaattgatatagtttggatatctgtacccacccaaatctcaggttgaattgtaatccccagtgctggaggtgggggccggtgggaggtgattggatcacgggatggatctctcatggcttggtgccgtcttcatgatagtgagtaagttctcgcgagatctggtcatttaaaggttgtgtgtacccccctcaccctccctctctcttgctcctgcttttgccacttgaggtgcctgctcccctttagccttccaccatgataggaagcttcctggggcctccctagaagccaagcagatgccagcatcatgcttcctgtaaagcctacagaactgtgagccaattaaacttctttttcttataaattatccagtttcaggtatttctttatagcaatgtaagaacagcctaagaaatcaatccatcagcaaactctcttagttcta >DB286688:1-539 (+) attcaaatataacatttccaaaatgggatgcttgacttcctgctcccaaaccagttcttcctgcaatattctcaatcttggtaaacttatatccaattgatatggtttggatgtctgtacccacccaagtctcaggttgagttgtagtccccagtgctggaggtgggggccggtgggaggtgattggatcacgggatggatctctcatggcttggtgccgtcttcatgatagtgagtaagttctcgcgagatctggtcatttaaaggttgtgtgtacccccctcaccctccctctctcttgctcctgcttttgccacttggggtgcctgctcccctttagccttccgccatgataggaggcttcctggggcctccctagaggccgggcggatgccggcatcatgcttcctgtagagcctgcagaactgtgagccaattaggcttctttttcttgtagattatccagtttcaggtatttctttatagcaatgtaagaacagcctaagaaatcaatccatcagcaaactctcttagttcta End editing Edited EST: DW411932, type: ag Aligns to: chr4:47902249-47902563 (-+) All mismatches: ag (68), ag (99), ag (129), ag (130), ag (152), ag (154), ag (155), ag (162), ag (166), ag (172), ag (173), ag (178), ag (185), ga (201), ag (205), ag (211), ag (221), ag (253), ag (264), ag (295), Editing mismatches: 19, all mismatches: 20, alignment length: 315, cluster length: 228, total number of As: 63 Locations in RNA: 68 99 129 130 152 154 155 162 166 172 173 178 185 205 211 221 253 264 295 Locations in genome: 47902508 47902477 47902447 47902446 47902424 47902422 47902421 47902414 47902410 47902404 47902403 47902398 47902391 47902371 47902365 47902355 47902323 47902312 47902281 Upstream nucleotide (in genome): c a t a c a a g t a a a t c t t t c t Upstream nucleotide summary: a: 7, c: 4, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): c g a g a a c t c a t a g c t c c g t Downstream nucleotide summary: a: 5, c: 6, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 2, at: 1, ca: 1, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 3, tg: 1, tt: 2, other: 0 >chr4:47902249-47902563 (-) ctttgacttaggcacattcgaattatatctttttttgggctgggcacagtggctcacgcctgtaatcccagcactttgggaggccaaggctggtgaatcacttgaggtcaggagttaagaccagcctggccaacatggcaaaaccccggatctactaaaaatacaaaaaattagctggacgtggtggcgtgcacctgtattcgcagctacttgggacactgaggcacgagaatttcttgtacctaggaggcagaggttgcagtgagccgagattgcgccactatactccagcctgggtgacagagtgagactttt >DW411932:13-327 (+) ctttgacttaggcacattcgaattatatctttttttgggctgggcacagtggctcgcgcctgtaatcccagcactttgggaggccagggctggtgaatcacttgaggtcaggagttgggaccagcctggccaacatggcgaggccccgggtctgctaaaggtacagaaaattggctggacgtggtggcatgcgcctgtgttcgcagctgcttgggacactgaggcacgagaatttcttgtgcctaggaggcggaggttgcagtgagccgagattgcgccactgtactccagcctgggtgacagagtgagactttt End editing Edited EST: DW417960, type: ag Aligns to: chr4:89907296-89907584 (-+) All mismatches: ag (43), ag (70), ag (89), ag (92), ag (97), ag (98), ag (139), ag (152), ag (178), ag (179), ag (240), ag (243), ag (244), ag (251), ac (293), ag (298), Editing mismatches: 15, all mismatches: 16, alignment length: 288, cluster length: 257, total number of As: 72 Locations in RNA: 43 70 89 92 97 98 139 152 178 179 240 243 244 251 298 Locations in genome: 89907558 89907531 89907512 89907509 89907504 89907503 89907462 89907449 89907423 89907422 89907361 89907358 89907357 89907350 89907302 Upstream nucleotide (in genome): t c c g c a a t t a c t a t c Upstream nucleotide summary: a: 4, c: 5, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): a g g g a g a g a t g a g t a Downstream nucleotide summary: a: 6, c: 0, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 1, ca: 2, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 3, tc: 0, tg: 1, tt: 1, other: 0 >chr4:89907296-89907584 (-) ggtcgggcgcggtggctcatgcctgtaatcccaccactttgggaggctgaggcaggcggatcacttgaggtcaggagttcaagaccagcctggccaacatggtgaaaccacatctctactaaaaatacaaaaattagccaggtgtggtggcagatgcctgtaatcacagctacttgagaggctgaggcatgagagtcacttgaacccgggaggtggaggttgcagtaagctgatattgtgccactgcactccagcctgggagatagggtgagactcaatctcaaaaaaa >DW417960:17-304 (+) ggtcgggcgcggtggctcatgcctgtgatcccaccactttgggaggctgaggcgggcggatcacttgaggtcgggggttcgggaccagcctggccaacatggtgaaaccacatctctactaagaatacaaaaattggccaggtgtggtggcagatgcctgtggtcacagctacttgagaggctgaggcatgagagtcacttgaacccgggaggtggaggttgcggtgggctgatgttgtgccactgcactccagcctgggagatagggtgagactccatc-cgaaaaaa End editing Edited EST: DW424154, type: ag Aligns to: chr4:140215085-140215332 (-+) All mismatches: ag (17), ag (22), ag (23), ag (45), ag (46), ag (48), ag (50), ag (54), ag (56), ag (76), ag (85), ag (88), ag (92), ag (98), ag (114), ag (120), ag (128), ag (137), ag (147), ag (155), ag (156), tc (166), ag (176), ta (233), Editing mismatches: 22, all mismatches: 24, alignment length: 248, cluster length: 160, total number of As: 50 Locations in RNA: 17 22 23 45 46 48 50 54 56 76 85 88 92 98 114 120 128 137 147 155 156 176 Locations in genome: 140215331 140215326 140215325 140215303 140215302 140215300 140215298 140215294 140215292 140215272 140215263 140215260 140215256 140215250 140215234 140215228 140215220 140215211 140215201 140215193 140215192 140215172 Upstream nucleotide (in genome): g c a t a c c g a t a t c t t c c g a g a c Upstream nucleotide summary: a: 6, c: 7, g: 4, t: 5, other: 0 Downstream nucleotide (in genome): g a g a c c g a c c t g g g g g g g t a c g Downstream nucleotide summary: a: 4, c: 5, g: 11, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 3, ag: 1, at: 2, ca: 1, cc: 1, cg: 5, ct: 0, ga: 2, gc: 0, gg: 2, gt: 0, ta: 1, tc: 1, tg: 3, tt: 0, other: 0 >chr4:140215085-140215332 (-) gaggtcaagagatccagaccatcctggctaacacagtgaaacctcgtctctaccaaaaatacaaaaaaaattagccaggtgtagcgaagggcgcctgtagtcccagctgttcaggaggctgagacagcagaatggtgtgaacccgggaggtggagcttgcagtgagccgagatcgtgctaccgcactccagcctgggagatacagcgagactctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaa >DW424154:16-263 (+) ggggtcgggagatccagaccatcctggctggcgcggtggagcctcgtctctaccaaaaatgcaaaaaaagttggccgggtgtggcgaagggcgcctgtggtcccggctgttcgggaggctgggacagcagagtggtgtgggcccgggaggcggagcttgcggtgagccgagatcgtgctaccgcactccagcctgggagatacagcgagactctgtcacaaaaaaaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: DW426924, type: ag Aligns to: chr4:77976631-77976895 (-+) All mismatches: ag (27), ag (59), ag (64), ag (78), ag (87), ag (88), ag (98), ct (100), ag (115), ag (118), ag (123), ag (127), ag (154), ag (163), ag (167), Editing mismatches: 14, all mismatches: 15, alignment length: 265, cluster length: 141, total number of As: 40 Locations in RNA: 27 59 64 78 87 88 98 115 118 123 127 154 163 167 Locations in genome: 77976884 77976852 77976847 77976833 77976824 77976823 77976813 77976796 77976793 77976788 77976784 77976757 77976748 77976744 Upstream nucleotide (in genome): c g c c c a a a t a t a t c Upstream nucleotide summary: a: 5, c: 5, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): c g g g a c c a c a g t c g Downstream nucleotide summary: a: 3, c: 5, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 0, at: 1, ca: 1, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 2, tg: 1, tt: 0, other: 0 >chr4:77976631-77976895 (-) gtaatcccagcactttgagaggctgaggcaggcggatcacttgaggtcaggaatttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccgggcatggtggcaggcgcctgtaatcgcagctactcaggatgctgaggcaggcaggagaattgcttgaatccaggaggcggatgttgcagtgagttgagatcatgctactgcactccagcctgggcaacagagtgagactctgtctcaaa >DW426924:16-280 (+) gtaatcccagcgctttgagaggctgaggcaggcggatcacttggggtcgggaatttgagaccggcctggccggcatggtgaagctctgtctctactaaagatgcaaagattggccgggcatggtggcaggcgcctgtagtcgcagctgctcgggatgctgaggcaggcaggagaattgcttgaatccaggaggcggatgttgcagtgagttgagatcatgctactgcactccagcctgggcaacagagtgagactctgtctcaaa End editing Edited EST: DW428201, type: ag Aligns to: chr4:146086634-146086887 (-+) All mismatches: ag (20), ag (39), ag (44), ag (49), ag (57), ag (71), ag (72), ag (74), ag (76), ag (81), ag (82), ag (97), ag (102), ag (105), ag (107), ag (110), ag (118), ag (136), ag (137), ag (142), ag (146), ag (166), ag (169), ag (177), ag (178), ag (202), ag (209), ag (212), ag (237), ag (239), ag (240), tg (256), ga (270), Editing mismatches: 31, all mismatches: 33, alignment length: 254, cluster length: 221, total number of As: 60 Locations in RNA: 20 39 44 49 57 71 72 74 76 81 82 97 102 105 107 110 118 136 137 142 146 166 169 177 178 202 209 212 237 239 240 Locations in genome: 146086884 146086865 146086860 146086855 146086847 146086833 146086832 146086830 146086828 146086823 146086822 146086807 146086802 146086799 146086797 146086794 146086786 146086768 146086767 146086762 146086758 146086738 146086735 146086727 146086726 146086702 146086695 146086692 146086667 146086665 146086664 Upstream nucleotide (in genome): g c g c g c a c t a a a t a a t c t a c t g a g a g g c a c a Upstream nucleotide summary: a: 11, c: 8, g: 7, t: 5, other: 0 Downstream nucleotide (in genome): g c g g g a c t g a c a c a t g t a t g c g t a c g t c c a g Downstream nucleotide summary: a: 7, c: 8, g: 10, t: 6, other: 0 Dinucleotide summary: aa: 3, ac: 4, ag: 1, at: 3, ca: 2, cc: 2, cg: 2, ct: 2, ga: 1, gc: 0, gg: 5, gt: 1, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr4:146086634-146086887 (-) gggagactgaggcgggtggatcacctgaggtcagtagttgagaccagcctgaccaacatagagaaaccccgtctctactaaaaatacaaaattagctgggcatggtggcacatgcctgtaatcccagctacttgggaggctgaggcgggagaatcgcttgaacctcggaggcagaggttgcggtgagccgagatcacgccgctgcactccagcctgagcaacaagagcgaaactccatctcaaaaaaaaaaaag >DW428201:17-270 (+) gggggactgaggcgggtggatcgcctggggtcggtagttgggaccagcctgaccggcgtggagaggccccgtctctactagaaatgcagagttggctgggcgtggtggcacatgcctgtggtcccggctgcttgggaggctgaggcgggggagtcgcttgggcctcggaggcagaggttgcggtgggccgaggtcgcgccgctgcactccagcctgagcagcgggagcgaaactccatcgcaaaaaaaaaaaaa End editing Edited EST: DW434559, type: ag Aligns to: chr4:151659161-151659402 (-+) All mismatches: ag (26), ag (39), ag (94), ag (97), ag (100), ag (101), ag (103), ag (105), ag (106), ag (139), ag (165), ag (171), ag (180), ag (184), ag (187), ag (191), Editing mismatches: 16, all mismatches: 16, alignment length: 242, cluster length: 166, total number of As: 50 Locations in RNA: 26 39 94 97 100 101 103 105 106 139 165 171 180 184 187 191 Locations in genome: 151659393 151659380 151659325 151659322 151659319 151659318 151659316 151659314 151659313 151659280 151659254 151659248 151659239 151659235 151659232 151659228 Upstream nucleotide (in genome): a c t t a a t c a a c a a c g c Upstream nucleotide summary: a: 7, c: 5, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g c c a a t c a a t g t c g g g Downstream nucleotide summary: a: 4, c: 4, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 3, ca: 1, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 0, tt: 0, other: 0 >chr4:151659161-151659402 (-) gggaggccaaggcgggcggatcacctgaggtcaggagttcaagaccaccctggctaacatggtgaaaccccgtctctactaaaaatacaaaaattagcctggcatgattgtgaatacttgtaatcccagctactcaggaggttgaggcaggagaatcgcttgaacccaggaggcagaggttgcagtgacccgagattgtgccattatacccagcctgggcgacagagcgaaacttcgtctca >DW434559:17-258 (+) gggaggccagggcgggcggatcgcctgaggtcaggagttcaagaccaccctggctaacatggtgaaaccccgtctctgctgaaggtgcggaaattagcctggcatgattgtgaatacttgtagtcccagctactcaggaggttgaggcgggagagtcgcttgagcccggggggcggaggttgcagtgacccgagattgtgccattatacccagcctgggcgacagagcgaaacttcgtctca End editing Edited EST: DW434838, type: ag Aligns to: chr4:146086649-146086887 (-+) All mismatches: ag (20), ag (39), ag (44), ag (49), ag (57), ag (71), ag (72), ag (74), ag (76), ag (81), ag (82), ag (97), ag (102), ag (105), ag (107), ag (110), ag (118), ag (136), ag (137), ag (142), ag (146), ag (166), ag (169), ag (177), ag (178), ag (202), gt (208), ag (209), ag (212), ag (237), ag (239), ag (240), Editing mismatches: 31, all mismatches: 32, alignment length: 239, cluster length: 221, total number of As: 60 Locations in RNA: 20 39 44 49 57 71 72 74 76 81 82 97 102 105 107 110 118 136 137 142 146 166 169 177 178 202 209 212 237 239 240 Locations in genome: 146086884 146086865 146086860 146086855 146086847 146086833 146086832 146086830 146086828 146086823 146086822 146086807 146086802 146086799 146086797 146086794 146086786 146086768 146086767 146086762 146086758 146086738 146086735 146086727 146086726 146086702 146086695 146086692 146086667 146086665 146086664 Upstream nucleotide (in genome): g c g c g c a c t a a a t a a t c t a c t g a g a g g c a c a Upstream nucleotide summary: a: 11, c: 8, g: 7, t: 5, other: 0 Downstream nucleotide (in genome): g c g g g a c t g a c a c a t g t a t g c g t a c g t c c a g Downstream nucleotide summary: a: 7, c: 8, g: 10, t: 6, other: 0 Dinucleotide summary: aa: 3, ac: 4, ag: 1, at: 3, ca: 2, cc: 2, cg: 2, ct: 2, ga: 1, gc: 0, gg: 5, gt: 1, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr4:146086649-146086887 (-) gggagactgaggcgggtggatcacctgaggtcagtagttgagaccagcctgaccaacatagagaaaccccgtctctactaaaaatacaaaattagctgggcatggtggcacatgcctgtaatcccagctacttgggaggctgaggcgggagaatcgcttgaacctcggaggcagaggttgcggtgagccgagatcacgccgctgcactccagcctgagcaacaagagcgaaactccatc >DW434838:17-255 (+) gggggactgaggcgggtggatcgcctggggtcggtagttgggaccagcctgaccggcgtggagaggccccgtctctactagaaatgcagagttggctgggcgtggtggcacatgcctgtggtcccggctgcttgggaggctgaggcgggggagtcgcttgggcctcggaggcagaggttgcggtgggccgatgtcgcgccgctgcactccagcctgagcagcgggagcgaaactccatc End editing Edited EST: DW436857, type: ag Aligns to: chr4:54229390-54229629 (-+) All mismatches: ag (14), ag (15), ag (34), ag (36), ag (44), ag (52), ag (122), ag (124), ag (126), ag (129), ag (130), ag (131), ag (143), ag (178), ag (181), ag (185), ag (201), ag (215), ag (223), ag (224), ag (235), ag (236), ag (241), ag (246), ag (249), Editing mismatches: 25, all mismatches: 25, alignment length: 239, cluster length: 237, total number of As: 78 Locations in RNA: 14 15 34 36 44 52 122 124 126 129 130 131 143 178 181 185 201 215 223 224 235 236 241 246 249 Locations in genome: 54229628 54229627 54229607 54229605 54229597 54229589 54229519 54229517 54229515 54229512 54229511 54229510 54229498 54229463 54229460 54229456 54229440 54229426 54229418 54229417 54229406 54229405 54229400 54229395 54229392 Upstream nucleotide (in genome): c a c c c t a c c c a a t a t c t c t a t a g c a Upstream nucleotide summary: a: 8, c: 10, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): a g c g t a c c g a a a c c g g g g a g a c g g g Downstream nucleotide summary: a: 7, c: 6, g: 11, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 3, at: 0, ca: 2, cc: 2, cg: 5, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 3, tc: 1, tg: 2, tt: 0, other: 0 >chr4:54229390-54229629 (-) caagtatgatttagagcccggcacagtggctcatgcctgtaatcccatcactttgggaggctgaggggggcagactgcttgagctcaggagtttgagatcaacctgggcaacacagcaaaactcaatctctacagaaaatttaaaaattaaataaaaaatgaaaaaactagccaggtgtggtgacctgtagtcccagccactcaggaggctaaggtggaggataacttgagcccagaagg >DW436857:13-251 (+) cggg-atgatttagagcccggcgcggtggctcgtgcctgtgatcccatcactttgggaggctgaggggggcagactgcttgagctcaggagtttgagatcaacctgggcagcgcggcgggactcaatctctgcagaaaatttaaaaattaaataaaaaatgaaaaagctggccgggtgtggtgacctgtggtcccagccactcgggaggctggggtggaggatggcttgggcccggaggg End editing Edited EST: DW465467, type: ag Aligns to: chr4:139117707-139118048 (-+) All mismatches: ag (16), ag (18), ag (24), ag (32), ag (37), ag (46), ag (47), ag (49), ag (56), ag (57), ag (75), ag (77), ag (81), ag (82), ac (86), ag (102), ag (112), ag (113), ag (118), ag (122), ag (129), ag (136), ag (139), ag (141), ag (142), ag (144), ag (145), ga (148), ag (154), ag (158), ag (167), ag (178), ag (213), tc (348), Editing mismatches: 31, all mismatches: 34, alignment length: 342, cluster length: 198, total number of As: 55 Locations in RNA: 16 18 24 32 37 46 47 49 56 57 75 77 81 82 102 112 113 118 122 129 136 139 141 142 144 145 154 158 167 178 213 Locations in genome: 139118048 139118046 139118040 139118032 139118027 139118018 139118017 139118015 139118008 139118007 139117989 139117987 139117983 139117982 139117962 139117952 139117951 139117946 139117942 139117935 139117928 139117925 139117923 139117922 139117920 139117919 139117910 139117906 139117897 139117886 139117851 Upstream nucleotide (in genome): n g a g c c a c a a a t a a c t a c t g a c g a g a a c a g g Upstream nucleotide summary: a: 13, c: 7, g: 7, t: 3, other: 1 Downstream nucleotide (in genome): g g g g g a c t a c t c a a g a t g c g g g a g a t c g g g c Downstream nucleotide summary: a: 7, c: 6, g: 14, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 4, at: 3, ca: 1, cc: 0, cg: 5, ct: 1, ga: 2, gc: 1, gg: 4, gt: 0, ta: 1, tc: 2, tg: 0, tt: 0, other: 1 >chr4:139117707-139118048 (-) agaggtcaagagcttgagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaataagctgagtgtggtggcagttgcctgtaatcccagctactcgggaggctgaagcagaagaattgcctgaacccaggaggtgaaggttgcagtgagccgagattgtgccattgcactcccgcccgggtgacaagagtgaggctctgtctaaaaaataataataaaataaaataataaaaattaaattaaattaaattaaaaaaaggcaacatcaatgtaagcctatttcataacaagtctttttttccccatggtgcttcatcctcacttggta >DW465467:16-357 (+) gggggtcaggagcttgggaccggcctggccggcgtggtgaggccctgtctctactaaaagtgcaaggatacgctgagtgtggtggcggttgcctgtggtcccggctgctcggggggctgaggcgggggggttacctgagcccgggaggtgagggttgcagtgggccgagattgtgccattgcactcccgcccgggtggcaagagtgaggctctgtctaaaaaataataataaaataaaataataaaaattaaattaaattaaattaaaaaaaggcaacatcaatgtaagcctatttcataacaagtctttttttccccatggtgcttcatccccacttggta End editing Edited EST: BX488071, type: ag Aligns to: chr4:77982911-77983382 (-+) All mismatches: ag (282), ag (288), ag (289), ag (295), ag (355), ag (366), ag (377), ag (383), ag (386), ag (391), ag (392), ag (393), ag (396), ag (422), ag (428), ag (432), ag (449), ag (463), ag (464), Editing mismatches: 19, all mismatches: 19, alignment length: 472, cluster length: 183, total number of As: 50 Locations in RNA: 282 288 289 295 355 366 377 383 386 391 392 393 396 422 428 432 449 463 464 Locations in genome: 77983101 77983095 77983094 77983088 77983028 77983017 77983006 77983000 77982997 77982992 77982991 77982990 77982987 77982961 77982955 77982951 77982934 77982920 77982919 Upstream nucleotide (in genome): c t a a t a t a t a a a t t c t c g a Upstream nucleotide summary: a: 8, c: 3, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): c a t c a c c a c a a t g g g c g a c Downstream nucleotide summary: a: 6, c: 7, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 0, at: 2, ca: 0, cc: 1, cg: 2, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 2, tc: 3, tg: 2, tt: 0, other: 0 >chr4:77982911-77983382 (-) ataggaaggtactcagcccaacttgaattatcaggaaaagtatctggcggggagtaacatcaaaatagctctcaagagatacataataaggcaggtgagagagaagggagtgcgttccagtcagtaggagcaatatgaacaaaggagcagtaacgtaaaataccaggggcaaggaaggatcatcagtagaagttactattacagcatgaagtttaagacagaaagtgatggaagatgtccgaggttagagaggtaggtcatagccgggcatggtggcttgcacctgtaatctcaacactttgggaggccgaggcgggtggatcacaaggtcaggagatcgagactatcctggctaacatggtgaaaccccgtctctactaaaaatacaaaaaattagctgggtgtggtggcgggtgcctgtagtcccagctacccaggaggctgaggcaggagaatggtgtgaacctgggag >BX488071:1-472 (+) ataggaaggtactcagcccaacttgaattatcaggaaaagtatctggcggggagtaacatcaaaatagctctcaagagatacataataaggcaggtgagagagaagggagtgcgttccagtcagtaggagcaatatgaacaaaggagcagtaacgtaaaataccaggggcaaggaaggatcatcagtagaagttactattacagcatgaagtttaagacagaaagtgatggaagatgtccgaggttagagaggtaggtcatagccgggcatggtggcttgcgcctgtggtctcagcactttgggaggccgaggcgggtggatcacaaggtcaggagatcgagactatcctggctgacatggtgaagccccgtctctgctaaagatgcaaagggttggctgggtgtggtggcgggtgcctgtggtcccggctgcccaggaggctgaggcgggagaatggtgtgggcctgggag End editing Edited EST: BF851057, type: ag Aligns to: chr4:57533901-57534267 (-+) All mismatches: ca (70), ag (213), ag (237), ag (238), ag (265), ag (268), ag (290), ag (303), ag (312), ag (315), ag (320), ag (321), ag (337), ag (347), ag (350), ag (351), ag (364), ag (368), ag (384), ag (387), ag (394), ag (397), ag (400), ag (404), Editing mismatches: 23, all mismatches: 24, alignment length: 367, cluster length: 192, total number of As: 66 Locations in RNA: 213 237 238 265 268 290 303 312 315 320 321 337 347 350 351 364 368 384 387 394 397 400 404 Locations in genome: 57534120 57534096 57534095 57534068 57534065 57534043 57534030 57534021 57534018 57534013 57534012 57533996 57533986 57533983 57533982 57533969 57533965 57533949 57533946 57533939 57533936 57533933 57533929 Upstream nucleotide (in genome): g t a c a t t t a t a t t a a a t t t t c a c Upstream nucleotide summary: a: 8, c: 3, g: 1, t: 11, other: 0 Downstream nucleotide (in genome): g a t g g t t a t a a g a a t c g t g g a t g Downstream nucleotide summary: a: 7, c: 1, g: 8, t: 7, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 4, ca: 1, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 4, tc: 0, tg: 4, tt: 3, other: 0 >chr4:57533901-57534267 (-) aatacaaaaattagctgggtatggtggtgggcgcctgcagtcccagttacttaggaggctgaggcacaagaatcacttgaaactgggaggcggaggttgcagtgagccgagatcgcaccactgcactccagcctggatgacagagtgagactccatcttgaaattattaataattacaccagtacaacaggcgtacatcagaagtgtcccaggcaaacctggatatcgggtccctttattatacataaaatgttaaatttctcacttaggtagagaatagtaaaaatgctcctgttgaacctaggtatcactgctgctattagggattagcaaaatgcaggtctgttaggatgctggaggaaaggaa >BF851057:66-432 (+) aataaaaaaattagctgggtatggtggtgggcgcctgcagtcccagttacttaggaggctgaggcacaagaatcacttgaaactgggaggcggaggttgcagtgagccgagatcgcaccactgcactccagcctggatgacagagtgggactccatcttgaaattattaatggttacaccagtacaacaggcgtacatcggaggtgtcccaggcaaacctggatgtcgggtccctttgttatacatgaagtgttggatttctcacttaggtggagaatagtgaaggtgctcctgttgagcctgggtatcactgctgctgttggggattggcgaagtgcgggtctgttaggatgctggaggaaaggaa End editing Edited EST: AW009270, type: ga Aligns to: chr4:26432313-26432809 (-+) All mismatches: ga (91), ga (103), ga (154), ga (160), ga (173), ga (176), ga (203), ga (206), ga (209), ga (211), ga (221), ga (229), ga (232), ga (233), ga (235), ga (239), ag (243), ga (253), ga (256), ga (260), ga (266), ga (275), ga (285), ga (296), ga (303), ga (308), ga (314), ga (317), ga (322), ga (327), ga (330), ga (333), ga (335), ga (341), ga (342), ga (347), ga (350), ga (355), ga (361), ga (366), ga (367), ga (371), ga (374), ga (382), ga (410), ga (417), ga (422), ga (423), ga (426), ga (430), cg (447), ga (451), ga (455), ga (463), ga (467), ga (468), ga (469), ga (472), ga (480), Editing mismatches: 57, all mismatches: 59, alignment length: 497, cluster length: 390, total number of Gs: 102 Locations in RNA: 91 103 154 160 173 176 203 206 209 211 221 229 232 233 235 239 253 256 260 266 275 285 296 303 308 314 317 322 327 330 333 335 341 342 347 350 355 361 366 367 371 374 382 410 417 422 423 426 430 451 455 463 467 468 469 472 480 Locations in genome: 26432719 26432707 26432656 26432650 26432637 26432634 26432607 26432604 26432601 26432599 26432589 26432581 26432578 26432577 26432575 26432571 26432557 26432554 26432550 26432544 26432535 26432525 26432514 26432507 26432502 26432496 26432493 26432488 26432483 26432480 26432477 26432475 26432469 26432468 26432463 26432460 26432455 26432449 26432444 26432443 26432440 26432436 26432428 26432400 26432393 26432388 26432387 26432384 26432380 26432360 26432355 26432347 26432343 26432342 26432341 26432338 26432330 Upstream nucleotide (in genome): a c a a a c a t t t t t t g c t c t t t a t g a t t t t t g c c t g t t a a a g t g t t t t g t g c t t t g g c a Upstream nucleotide summary: a: 11, c: 8, g: 10, t: 28, other: 0 Downstream nucleotide (in genome): a a t t a g a a t a a c g c t t c t t a g g c g c c c c t c c g g t g t g g g c g a a g g g t c a g c t g g a a c Downstream nucleotide summary: a: 13, c: 14, g: 18, t: 12, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 5, at: 2, ca: 2, cc: 2, cg: 3, ct: 1, ga: 3, gc: 4, gg: 1, gt: 2, ta: 5, tc: 7, tg: 9, tt: 7, other: 0 >chr4:26432313-26432809 (-) tttactgtggcttctgcatttcaaatcagcacttgcagggagacaacggggtttttgaatagtatcacctggtatgaaaagttttcccaagaaaccacaaacgattgttcattttttctccttttttgttaactttttgccacactcaagtcagtttaagtcctagcaaaaagacggtagttaggataccactgtggctgtagatgatgtgacactggttgaatttgtgctggcgtttgtgtaacttccctcgctgtttgtgtttgattcgttagggggcacctggcttgaattggctcgaaggattgctcctgctgcactgcaatgtggccgcggccctggttctggtgtgtaggtaaaggtaagg-ctggtggaataaatgattccatcatttcggaccaaagttactggaacctggactggttgccggacccatctccaaccttct-cggaatgcagaaatgtctgggacgacacagagcatactctctccacacc >AW009270:1-497 (+) tttactgtggcttctgcatttcaaatcancacttgcagggagacaacggggtttttgaatagtatcacctggtatgaaaagttttcccaaaaaaccacaaacaattgttcattttttctccttttttgttaactttttgccacactcaagtcaatttaaatcctagcaaaaaaacagtagttaggataccactgtggctgtaaataatataacactggttaaatttgtactaacatttatgtgacttccctcactatttatgtttaattcgttaaggggcacctagcttgaattgactcgaaagattactcctactacactacaatatgaccacagccctaattctagtatgtaagtaaaagtaaaagcta-tgaaataaataattccatcatttcggaccaaagttactagaacctagactaattaccgaacccatctccaaccttgtgcaga-tacagaaatatctaaaacaacacagaacatactctctccacacc End editing Edited EST: AW236897, type: ga Aligns to: chr4:99579299-99579693 (-+) All mismatches: ga (175), ga (177), ga (185), ga (190), ga (200), ga (203), ga (205), ga (211), ga (226), ga (239), ga (242), ga (252), ga (259), ga (262), ga (268), ga (270), ga (282), ga (283), ga (286), ga (289), ga (290), ga (291), ga (296), ga (306), ga (315), ga (319), ga (324), ga (325), ga (326), ag (328), ga (337), ga (339), ga (344), ga (347), ga (354), ga (357), ga (377), ga (378), ga (386), Editing mismatches: 38, all mismatches: 39, alignment length: 395, cluster length: 212, total number of Gs: 65 Locations in RNA: 175 177 185 190 200 203 205 211 226 239 242 252 259 262 268 270 282 283 286 289 290 291 296 306 315 319 324 325 326 337 339 344 347 354 357 377 378 386 Locations in genome: 99579519 99579517 99579509 99579504 99579494 99579491 99579489 99579483 99579468 99579455 99579452 99579442 99579435 99579432 99579426 99579424 99579413 99579412 99579408 99579405 99579404 99579403 99579398 99579388 99579379 99579375 99579371 99579370 99579369 99579357 99579355 99579350 99579347 99579340 99579337 99579317 99579316 99579308 Upstream nucleotide (in genome): c c a a c c c c a c c c c t g a c g t c g g a t a t c g g a g t a t t t g t Upstream nucleotide summary: a: 8, c: 13, g: 8, t: 9, other: 0 Downstream nucleotide (in genome): c c c g c c g t c c g a g c a c g g c g g g t a g t g g a g t a t t c g c t Downstream nucleotide summary: a: 5, c: 12, g: 14, t: 7, other: 0 Dinucleotide summary: aa: 0, ac: 3, ag: 3, at: 2, ca: 1, cc: 5, cg: 6, ct: 1, ga: 2, gc: 1, gg: 4, gt: 1, ta: 2, tc: 3, tg: 1, tt: 3, other: 0 >chr4:99579299-99579693 (-) accgaccgcctggcgcacggacgcgggcgctcgctttgtgttcggggctagcgtcggcgaggcttgagcttgcagcgcgcggcttccctgctttctcgcggccaccccggctccggcggcctcggcgcgcgaggggctggaggtgcgggagccgctctccgccggtcggtccccgcgcggctgagcccaggccgccagcgccgcggccccgtgcggtgtccctgagctcctgctccccgccgggctgctccgagcaacggtgcttcggagctccaaact-cgggctgccggggcaagtgtcttcatgaacccagaggatgtc-cgggaagcactacaagggtcctgaagtcagttgttgcatcaaatacttcatatttggcttcaatgtcatatttt >AW236897:1-395 (+) accgaccgcctggcgcacggacgcgggcgctcgctttgtgttcggggctagcgtcggcgaggcttgagcttgcagcgcgcggcttccctgctttctcgcggccaccccggctccggcggcctcggcgcgcgaggggctggaggtgcgggagccgctctccgccggtcggtccccacacggctgaacccaagccgccagcaccacagccccatgcggtgtccctgaactcctgctccccaccaggctgctccaancaacagtacttcgaaactccaaactgcaa-ctaccaaagcaaatgtcttcataaacccagaagatatcgcaaaag-cactacaaagatcctaaaatcagttattacatcaaatacttcatatttaacttcaatatcatatttt End editing Edited EST: AA757775, type: ag Aligns to: chr4:438772-439062 (-+) All mismatches: ag (32), ag (45), ag (76), ag (86), ag (90), ag (96), ag (112), ag (125), ag (141), ag (168), ag (184), ag (189), ag (192), ag (193), ag (221), Editing mismatches: 15, all mismatches: 15, alignment length: 291, cluster length: 190, total number of As: 53 Locations in RNA: 32 45 76 86 90 96 112 125 141 168 184 189 192 193 221 Locations in genome: 439031 439018 438987 438977 438973 438967 438951 438938 438922 438895 438879 438874 438871 438870 438842 Upstream nucleotide (in genome): t c c a t a a t t g a c g a c Upstream nucleotide summary: a: 5, c: 4, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): g g t c g c a g g g t t a c a Downstream nucleotide summary: a: 3, c: 3, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 0, at: 1, ca: 1, cc: 0, cg: 1, ct: 2, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 4, tt: 0, other: 0 >chr4:438772-439062 (-) ggtggctcactcctgtaatcccagcaactttaggaggctgaggcaggtggatcacgaggtcaggagattgagaccatcctggctaacatagtgaaaccccatctctactaaaaatacaaaaattagctgggcgtggtggtaggtgcctgtagtcccagctattggggaggctgaggcaggagaatggcatgaacccaggaggtggagcttgcagtgagccaagatcccgccactgcactccagcctgggcgacagagtgagactccatctcaaaaaaaaaaaaaaaaaaaa >AA757775:1-291 (+) ggtggctcactcctgtaatcccagcaactttgggaggctgaggcgggtggatcacgaggtcaggagattgagaccgtcctggctagcatggtgaagccccatctctactaagaatacaaaaattggctgggcgtggtggtgggtgcctgtagtcccagctattgggggggctgaggcaggagagtggcgtgggcccaggaggtggagcttgcagtgagccgagatcccgccactgcactccagcctgggcgacagagtgagactccatctcaaaaaaaaaaaaaaaaaaaa End editing Edited EST: AL601067, type: ag Aligns to: chr4:88433136-88433654 (-+) All mismatches: ag (262), ag (276), ag (298), ag (308), ag (322), ag (348), ag (354), ag (357), ag (398), ag (414), ag (427), ag (433), ag (442), ag (462), ag (471), Editing mismatches: 15, all mismatches: 15, alignment length: 518, cluster length: 210, total number of As: 57 Locations in RNA: 262 276 298 308 322 348 354 357 398 414 427 433 442 462 471 Locations in genome: 88433393 88433379 88433357 88433347 88433333 88433307 88433301 88433298 88433257 88433241 88433228 88433222 88433213 88433193 88433184 Upstream nucleotide (in genome): a c c c c c t t t c c a a c t Upstream nucleotide summary: a: 3, c: 8, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t g c g g t c a t g c t c g g Downstream nucleotide summary: a: 1, c: 4, g: 6, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 2, ca: 0, cc: 2, cg: 5, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 1, other: 0 >chr4:88433136-88433654 (-) ggaaaaactccaatgtgcaaaggtttaccaagtttctgctggcatcatgcttgctaatgtcacattggtcaaagcaaatcacaaggttaaggcccacatcatagggaaatgaagcccagaagttgtggtttactgggggtcatcattgtttaccattatctcctctcttaccctttatcttcaatttttccttatttacctgtcttttcccttcagcacagaagggaaatctggggccgggcatggtggctcatgcctgtaatcccagtacttccagggggctgaggcaggtggatcacctgaggtcaggagtttgagaccagcctgaccaacatggtgaaacccccatctctactaaaaatacaaaaaaattagctgggtttggtggcgcatgcctataatcccagctactcaggaggctgaggcacgagaattgcttgaaccctggaggtggaggttgcagtgagcctagatcacgccactgcactccagcctggaaaacagagtgagactctgtct >AL601067:1-518 (+) ggaaaaactccaatgtgcaaaggtttaccaagtttctgctggcatcatgcttgctaatgtcacattggtcaaagcaaatcacaaggttaaggcccacatcatagggaaatgaagcccagaagttgtggtttactgggggtcatnattgtttaccattatctcctctcttaccctttatcttcaatttttccttatttacctgtcttttcccttcagcacagaagggaaatctggggccgggcatggtggctcatgcctgtagtcccagtacttccggggggctgaggcaggtggatcgcctgaggtcgggagtttgagaccggcctgaccaacatggtgaaacccccgnctctgctgaaaatacaaaaaaattagctgggtttggtggcgcatgcctgtaatcccanctactcgggaggctgangcgcgagagttgcttgngccctggaggtggaggttgcggtgagcctggatcacgccactg-actccagcctgnaaaacanagngagactctgtct End editing Edited EST: DA081168, type: ag Aligns to: chr5:90580826-90581384 (-+) All mismatches: ag (188), ag (216), ag (232), ag (249), ag (258), ct (345), ag (386), ag (387), ag (395), ag (411), ag (413), ag (418), ag (455), ag (457), Editing mismatches: 13, all mismatches: 14, alignment length: 558, cluster length: 270, total number of As: 64 Locations in RNA: 188 216 232 249 258 386 387 395 411 413 418 455 457 Locations in genome: 90581197 90581169 90581153 90581136 90581127 90580999 90580998 90580990 90580974 90580972 90580967 90580930 90580928 Upstream nucleotide (in genome): t c t g c t a t t t t a c Upstream nucleotide summary: a: 2, c: 3, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): a t g g g a g a t a c c g Downstream nucleotide summary: a: 4, c: 2, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 0, cc: 0, cg: 2, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 4, tc: 1, tg: 1, tt: 1, other: 0 >chr5:90580826-90581384 (-) gtggaatcacatcctgataacgtaaattaacagtttaccttcacaggtactggacaaatacaagattagaaatcatccctctgcccaccctgagaaatattcatgtttgacttctgatatggtctgtgtccccacccaaatttcatcatgaattcctacctgttctgggaagggccctgtaggaggtaattgaatcctgagggcgggtctttcccatgctgttctcgtgatagtgaataagtctcatgagatctgacagttttagaagagggaatttccctgcaaaagctcctttttatgcctgctgccatccatgtaagacatgacttgctcctcctttccttccgctatgattgtgaggcttctccagccattgtggaactgtaagtccattaaactctttttcctgtataaattacccagtctcaggtatgtctttatcagcagcgtgaaaacagactaatacaatttctttctctactctatgtttatactacataaaatgcagatttactttgtgagaggaatgtataattgactgttgctctttccccacctg >DA081168:1-558 (+) gtggaatcacatcctgataacgtaaattaacagtttaccttcacaggtactggacaaatacaagattagaaatcatccctctgcccaccctgagaaatattcatgtttgacttctgatatggtctgtgtccccacccaaatttcatcatgaattcctacctgttctgggaagggccctgtaggaggtgattgaatcctgagggcgggtctttcccgtgctgttctcgtgatggtgaataagtctcatgggatctgacggttttagaagagggaatttccctgcaaaagctcctttttatgcctgctgccatccatgtaagacatgacttgctcctcctttcctttcgctatgattgtgaggcttctccagccattgtggaactgtgggtccattgaactctttttcctgtgtgaattgcccagtctcaggtatgtctttatcagcagcgtgaaagcggactaatacaatttctttctctactctatgtttatactacataaaatgcagatt-actttgtgagaggaatgtataattgactgttgctctttccccacctg End editing Edited EST: DB275834, type: ag Aligns to: chr5:150319361-150319931 (-+) All mismatches: ag (63), ag (72), ag (73), ag (76), ag (77), ag (78), ag (81), ag (82), ag (83), ag (98), ag (99), ag (100), ag (110), ag (111), ag (113), ag (114), ag (121), ag (125), ag (132), ag (133), ag (134), ag (137), ag (147), ag (178), ag (179), ag (187), ag (188), ag (193), ag (199), ag (200), ag (206), ag (207), ag (212), ag (215), ag (216), ag (223), ag (235), ag (249), ag (250), ag (274), ag (292), ag (294), ag (297), ag (298), ag (299), ct (372), ag (468), ag (545), ag (546), ag (547), ag (555), ag (564), ag (566), Editing mismatches: 52, all mismatches: 53, alignment length: 572, cluster length: 503, total number of As: 227 Locations in RNA: 63 72 73 76 77 78 81 82 83 98 99 100 110 111 113 114 121 125 132 133 134 137 147 178 179 187 188 193 199 200 206 207 212 215 216 223 235 249 250 274 292 294 297 298 299 468 545 546 547 555 564 566 Locations in genome: 150319869 150319860 150319859 150319856 150319855 150319854 150319851 150319850 150319849 150319834 150319833 150319832 150319822 150319821 150319819 150319818 150319811 150319807 150319800 150319799 150319798 150319795 150319785 150319755 150319754 150319746 150319745 150319740 150319734 150319733 150319727 150319726 150319721 150319718 150319717 150319710 150319698 150319684 150319683 150319659 150319641 150319639 150319636 150319635 150319634 150319465 150319388 150319387 150319386 150319378 150319369 150319367 Upstream nucleotide (in genome): a c a a a a a a a t a a a a t a t t a a a a g a a a a t t a t a t a a t a t a a g c c a a c a a a a a t Upstream nucleotide summary: a: 35, c: 4, g: 2, t: 11, other: 0 Downstream nucleotide (in genome): g a c a a g a a g a a t a t a c g c a a g g a a t a g a a g a a t a g g a a a a c c a a a a a a t g t g Downstream nucleotide summary: a: 29, c: 5, g: 12, t: 6, other: 0 Dinucleotide summary: aa: 19, ac: 2, ag: 9, at: 5, ca: 3, cc: 1, cg: 0, ct: 0, ga: 1, gc: 1, gg: 0, gt: 0, ta: 6, tc: 1, tg: 3, tt: 1, other: 0 >chr5:150319361-150319931 (-) ctaactacagtaatgggtgtgaagtgcgatcttatcgctatctctctgattttcacaccaaaagtatgagcaacaaaagaaaagaatagtcttcaataaatggtgctgaaataactggatagctacatgcaaaagaagttagttggaac-ttacaccataggtaaaaattaacttaaaatggatcaaagactaaatgtaagagctaaagttataaagctcttaggaaaaaaaaaaaacctacaggggtaaatcttcatgaccttggatttggaaatggattcctggatttgacaccaaaagcatgaacaacaaaagaaaaaatttaaaaactggacttcatcaaaattataaactcttgtgcttcaaaggacattattaagaaagtgaaaagacaagccacagaatgggagaaactatttgcaaatcacacatctgataagggacttatacctattgcaaaaaccacaattacttttgcaccaacctaaaagaatataatgaacttccattactcaataataaaaggcaaagaatccaattcaaaaatgagtaaaggatctgaatagacatt >DB275834:1-572 (+) ctaactacagtaatgggtgtgaagtgcgatcttatcgctatctctctgattttcacaccaaaggtatgagcggcaggggaggggaatagtcttcaatgggtggtgctgaggtggctggatggctgcatgcaggggaggttagttgggactttacaccataggtaaaaattaacttaaggtggatcagggactgaatgtgggagctggagttgtagggctcttgggaaaaaaaaagaacctacaggggtggatcttcatgaccttggatttggagatggattcctggatttggcgccgggagcatgaacaacaaaagaaaaaatttaaaaactggacttcatcaaaattataaactcttgtgcttcaaaggatattattaagaaagtgaaaagacaagccacagaatgggagaaactatttgcaaatcacacatctgataagggacttatacctattgcaaaaaccacgattacttttgcaccaacctaaaagaatataatgaacttccattactcaataataaaaggcaaagaatccaattcaagggtgagtaagggatctgagtggacatt End editing Edited EST: DB283484, type: ag Aligns to: chr5:38823061-38823547 (-+) All mismatches: ag (49), ag (69), ag (79), ag (81), ag (93), ag (101), ag (111), ag (113), ag (117), ag (125), ag (143), ag (145), ag (157), ag (165), ag (175), ag (177), ag (181), ag (189), ag (197), tc (204), ag (207), ag (209), ag (213), ag (225), ag (241), tc (242), ag (252), ag (260), ga (294), ag (296), ag (328), ag (330), ag (374), ag (446), Editing mismatches: 31, all mismatches: 34, alignment length: 487, cluster length: 398, total number of As: 128 Locations in RNA: 49 69 79 81 93 101 111 113 117 125 143 145 157 165 175 177 181 189 197 207 209 213 225 241 252 260 296 328 330 374 446 Locations in genome: 38823499 38823479 38823469 38823467 38823455 38823447 38823437 38823435 38823431 38823423 38823405 38823403 38823391 38823383 38823373 38823371 38823367 38823359 38823351 38823341 38823339 38823335 38823323 38823307 38823296 38823288 38823252 38823220 38823218 38823174 38823102 Upstream nucleotide (in genome): t t t t c t t t c c t t c t t t c c t t t c t c t c t t c t t Upstream nucleotide summary: a: 0, c: 10, g: 0, t: 21, other: 0 Downstream nucleotide (in genome): c t t c g t t c c g t c g t t c c g t t c c t t t c c c c t t Downstream nucleotide summary: a: 0, c: 13, g: 4, t: 14, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 5, cg: 4, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 8, tg: 0, tt: 13, other: 0 >chr5:38823061-38823547 (-) ttaaagttgagtattattccagtgtgtgcagtatgtatacacacgtatacacatgtacccatgtatgtatgcacacgtatacacatgtacccaggtatgtatgcacgcgtatacacacgtacccaggtatgtatgcacgcgtatacacacgtacccaggtatgtatgcacgcgtatacacacgtacccaggtatgtatgcacgtgtatacacacgtacccatgtatgtacacgtatacacatgtaccatgtatgtatgcacacgtatacacatgtatgtatagatgtatacatgtacacacttatgaatacatgtgtatctacatgtacacatgcacacatgtatatgcacatgtgtatacaggcatgtatatatgtgtgcttacctacgaatatacatacatacacatatctgtatgcatatacacacgtacatatcgatatgtatatgtatacatatgtgtccggaattggtgggttcttgatct >DB283484:1-487 (+) ttaaagttgagtattattccagtgtgtgcagtatgtatacacacgtatgcacatgtacccatgtatgtgtgcacacgtgtgcacatgtacccgggtatgtgtgcacgcgtgtgcacgcgtacccgggtatgtatgcacgcgtgtgcacacgtacccgggtatgtgtgcacgcgtgtgcacgcgtacccgggtatgtgtgcacgcgtgtgcacgcgtacccatgtgtgtacacgtatacacgcgtaccatgtgtgtatgcgcacgtatacacatgtatgtatagatgtatacatatgcacacttatgaatacatgtgtatctacatgtgcgcatgcacacatgtatatgcacatgtgtatacaggcatgtatatgtgtgtgcttacctacgaatatacatacatacacatatctgtatgcatatacacacgtacatatcgatatgtgtatgtatacatatgtgtccggaattggtgggttcttgatct End editing Edited EST: DB098552, type: ag Aligns to: chr5:133521174-133521737 (-+) All mismatches: ag (228), ag (244), ag (266), ag (301), ag (311), ag (320), ag (325), ag (343), ag (344), ag (356), ag (359), ag (360), ag (363), ag (365), ag (367), ag (368), ag (371), ag (374), ag (400), ag (401), ag (410), ag (414), ag (423), ag (427), ag (429), ag (430), ag (442), ag (462), ag (519), ag (526), ag (527), ag (528), ag (535), ag (537), ga (541), ag (542), ag (545), Editing mismatches: 36, all mismatches: 37, alignment length: 565, cluster length: 318, total number of As: 101 Locations in RNA: 228 244 266 301 311 320 325 343 344 356 359 360 363 365 367 368 371 374 400 401 410 414 423 427 429 430 442 462 519 526 527 528 535 537 542 545 Locations in genome: 133521510 133521494 133521472 133521437 133521427 133521418 133521413 133521395 133521394 133521382 133521379 133521378 133521375 133521373 133521371 133521370 133521367 133521364 133521338 133521337 133521328 133521324 133521315 133521311 133521309 133521308 133521296 133521276 133521219 133521212 133521211 133521210 133521203 133521201 133521196 133521193 Upstream nucleotide (in genome): a c a c c g c g a t t a a t c a a t t a t c g c g a a c a a a a a g g a Upstream nucleotide summary: a: 16, c: 8, g: 6, t: 6, other: 0 Downstream nucleotide (in genome): t g t c g g g a a c a a t c a a t g a t c g g g a g c g a a a a g a a t Downstream nucleotide summary: a: 14, c: 5, g: 11, t: 6, other: 0 Dinucleotide summary: aa: 7, ac: 1, ag: 2, at: 6, ca: 1, cc: 1, cg: 6, ct: 0, ga: 4, gc: 0, gg: 2, gt: 0, ta: 2, tc: 3, tg: 1, tt: 0, other: 0 >chr5:133521174-133521737 (-) ttctctcatcctccacatgtggttcattagctacacctccaaatacatctttctcttttatctctaataaccctgtcctggtccaagccttctgaaaggtcttgcggcttctcttcttccacccactacaatccactcacacaatcacaagagcgctctttctatactgtaaagcggatcctgccacatgctgcttaccttccatcacctgaggctacttaatgaaaatgggatgaagtggccagcggctgtaatcacgcctgtaatcctagcactttgggaggctgaggtgggtggatcacttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagccgggcatggtggtgggcgcctgtaatcccagctactcaggaggctgaggcagaagaatcgcttgaaccccggagccagaggttgcagtgagccgagacaccactgcactccagcctgggcaagagaatgagactccatcttaaaaaaaaaaaaaaaaaagaaaagaaaa-tgggatgaaattccacttt >DB098552:1-565 (+) ttctctcatcctccacatgtggttcattagctacacctccaaatacatctttctcttttatctctaataaccctgtcctggtccaagccttctgaaaggtcttgcggcttctcttcttccacccactacaatccactcacacaatcacaagagcgctctttctatactgtaaagcggatcctgccacatgctgcttaccttccatcacctgaggctacttaatgaaagtgggatgaagtggccggcggctgtaatcacgcctgtagtcctagcactttgggaggctgaggtgggtggatcgcttgaggtcgggagttcgggaccggcctggccaacatggtgggaccccgtctctgctggaagtgcggaagttggccgggcatggtggtgggcgcctgtggtcccagctgctcgggaggctggggcgggggaatcgcttgagccccggagccagaggttgcggtgagccgagacaccactgcactccagcctgggcaagagaatgagactccatcttagaaaaaagggaaaaaagggaaaagaagatgggatgaaattccacttt End editing Edited EST: DW410101, type: ag Aligns to: chr5:142667689-142668007 (-+) All mismatches: ag (52), ag (67), ag (68), ag (98), ag (107), ag (131), ag (135), ag (137), ag (143), ag (145), ag (160), ag (176), ag (192), ag (255), ag (264), ag (267), ag (268), ag (273), ag (283), ag (311), Editing mismatches: 20, all mismatches: 20, alignment length: 319, cluster length: 260, total number of As: 71 Locations in RNA: 52 67 68 98 107 131 135 137 143 145 160 176 192 255 264 267 268 273 283 311 Locations in genome: 142667972 142667957 142667956 142667926 142667917 142667893 142667889 142667887 142667881 142667879 142667864 142667848 142667832 142667769 142667760 142667757 142667756 142667751 142667741 142667713 Upstream nucleotide (in genome): t t a c a g a c g a a t c c c t a g c g Upstream nucleotide summary: a: 6, c: 6, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): t a t g g c c t a c a g c g g a g g c g Downstream nucleotide summary: a: 4, c: 5, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 2, at: 1, ca: 0, cc: 2, cg: 3, ct: 1, ga: 1, gc: 1, gg: 2, gt: 0, ta: 2, tc: 0, tg: 1, tt: 1, other: 0 >chr5:142667689-142668007 (-) taacatcttaaatttccaatttctggccgggcgctatggctcacgcctgtaattccagcacgttgggaggccgaggtgggcagatcatcaagtcaggagttcgagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaaaattagccaggcgtggtggcacatgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaatctgggaggcagaggttgcagtaagccgagattgtgccactgtactccagcctgggcaacagagtgaggctccgtctccaaaaaaaaaaaa >DW410101:17-335 (+) taacatcttaaatttccaatttctggccgggcgctgtggctcacgcctgtggttccagcacgttgggaggccgaggtgggcggatcatcaggtcaggagttcgagaccagcctggccagcgtggtggagccctgtctctactagaaatacaaaaaaattggccaggcgtggtggcgcatgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaatctgggaggcggaggttgcggtgggccgggattgtgccgctgtactccagcctgggcaacagagtggggctccgtctccaaaaaaaaaaaa End editing Edited EST: DW413547, type: ag Aligns to: chr5:17150348-17150650 (-+) All mismatches: ag (143), ag (145), ag (146), ag (148), ag (159), ag (161), ag (162), ag (188), ag (227), ag (231), ag (233), ag (236), ag (238), ag (252), ag (256), ag (273), ag (295), ag (309), ag (312), Editing mismatches: 19, all mismatches: 19, alignment length: 303, cluster length: 170, total number of As: 54 Locations in RNA: 143 145 146 148 159 161 162 188 227 231 233 236 238 252 256 273 295 309 312 Locations in genome: 17150524 17150522 17150521 17150519 17150508 17150506 17150505 17150479 17150440 17150436 17150434 17150431 17150429 17150415 17150411 17150394 17150372 17150358 17150355 Upstream nucleotide (in genome): c c a t t t a t g a c a t t a c t c g Upstream nucleotide summary: a: 5, c: 5, g: 2, t: 7, other: 0 Downstream nucleotide (in genome): c a t g t a t g g c t t a c a g g g g Downstream nucleotide summary: a: 4, c: 3, g: 7, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 3, ca: 1, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 3, tt: 1, other: 0 >chr5:17150348-17150650 (-) taaactataaattccacccttaaaattttttaatcacaaacaactttcaaatataaatacaagtagtctccagtttttaaactaagcgtatcatatatataattcataattaattactggccatgcacaatagctcaggcctataatcccagcactttgggaggccgaggtaggaggatcacttgagctcaggagttccagaccagcctgagtaacataataagacctcgtctctactaaaaataaaaaattagccaggcgtgagggtgtatacttgtagtcccagctaatcaggaggctggt >DW413547:17-319 (+) taaactataaattccacccttaaaattttttaatcacaaacaactttcaaatataaatacaagtagtctccagtttttaaactaagcgtatcatatatataattcataattaattactggccatgcgcggtggctcaggcctgtggtcccagcactttgggaggccgaggtgggaggatcacttgagctcaggagttccagaccagcctgggtagcgtagtgagacctcgtctctgctagaaataaaaaattagccgggcgtgagggtgtatacttgtggtcccagctaatcggggggctggt End editing Edited EST: DW415590, type: ag Aligns to: chr5:137252217-137252516 (-+) All mismatches: ag (14), ag (15), ag (68), ag (90), ag (91), tc (96), ag (127), ag (137), ag (164), ag (165), ag (182), ag (184), ag (187), ag (192), ag (196), ag (239), ag (258), ag (298), ag (300), Editing mismatches: 18, all mismatches: 19, alignment length: 300, cluster length: 287, total number of As: 86 Locations in RNA: 14 15 68 90 91 127 137 164 165 182 184 187 192 196 239 258 298 300 Locations in genome: 137252515 137252514 137252461 137252439 137252438 137252402 137252392 137252365 137252364 137252347 137252345 137252342 137252337 137252333 137252290 137252271 137252231 137252229 Upstream nucleotide (in genome): c a c t a c a c a a a t a t g c c c Upstream nucleotide summary: a: 7, c: 7, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): a g g a t g t a a a a c a g g c c c Downstream nucleotide summary: a: 7, c: 4, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 1, at: 2, ca: 2, cc: 3, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr5:137252217-137252516 (-) caaggcagtgcaatgatatattcaaagtgctaaaagaaaaaaaaaggtggcagccaggctcagtggctcacgcctgtaatccctgcactttgggaggccaaggtggtggatcacagggttaggaattcgagaccagcctggttaacatggcaaaaccccgcctctactaaaaatacaaaaattagccgggtgtggtggtgcgcatctgtaactctagctacttgggaggctgaggcacgagaatcacttgaaccttggaaattgaggctgcggtgagctgagatcacaccactgtactcc >DW415590:13-312 (+) cggggcagtgcaatgatatattcaaagtgctaaaagaaaaaaaaaggtggcagccgggctcagtggctcacgcctgtggtccccgcactttgggaggccaaggtggtggatcacggggttaggagttcgagaccagcctggttaacatggcggaaccccgcctctactagagatgcaaagattggccgggtgtggtggtgcgcatctgtaactctagctacttggggggctgaggcacgagaatcgcttgaaccttggaaattgaggctgcggtgagctgagatcgcgccactgtactcc End editing Edited EST: DW417975, type: ag Aligns to: chr5:17197978-17198274 (-+) All mismatches: ag (10), ag (16), ag (18), ag (21), ag (33), ag (60), ag (106), ag (126), ag (127), ag (139), ag (185), ag (227), ag (233), ag (247), Editing mismatches: 14, all mismatches: 14, alignment length: 296, cluster length: 239, total number of As: 57 Locations in RNA: 10 16 18 21 33 60 106 126 127 139 185 227 233 247 Locations in genome: 17198273 17198266 17198264 17198261 17198249 17198222 17198176 17198156 17198155 17198143 17198097 17198055 17198049 17198035 Upstream nucleotide (in genome): c g g c c c c g a t c a t t Upstream nucleotide summary: a: 2, c: 6, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): g g g g t g t a t c a g g a Downstream nucleotide summary: a: 3, c: 1, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 1, cc: 0, cg: 3, ct: 2, ga: 1, gc: 0, gg: 2, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr5:17197978-17198274 (-) cagcctggagagcagtggcatgatcatggctcactgcagcctcgactctcccaggcttagatgatcctcccccctcagcctcctgagtagctgggaccatagcataccaccatgcctgaataatattttgtactttttgtagagatggggttttgctatgttgcccatgctggtctcaaactcttacactcaaacaatctgcacacttcagtctcccaaagtgctaggattacagggataagccattgcacctggccagtctagtattttatacccaaccaatctatccatccaaag >DW417975:9-304 (+) cggcc-ggggggcggtggcatgatcgtggctcactgcagcctcgactctcccgggcttagatgatcctcccccctcagcctcctgagtagctgggaccgtagcataccaccatgcctgggtaatattttgtgctttttgtagagatggggttttgctatgttgcccatgctggtctcgaactcttacactcaaacaatctgcacacttcagtctcccaaggtgctgggattacagggatgagccattgcacctggccagtctagtattttatacccaaccaatctatccatccaaag End editing Edited EST: DW431557, type: ag Aligns to: chr5:37291524-37291776 (-+) All mismatches: ag (163), ag (169), ag (175), ag (176), ag (198), ag (214), ag (219), ag (220), ag (234), ag (243), ag (245), tc (246), ag (252), ag (253), ag (264), ag (266), Editing mismatches: 15, all mismatches: 16, alignment length: 252, cluster length: 105, total number of As: 30 Locations in RNA: 163 169 175 176 198 214 219 220 234 243 245 252 253 264 266 Locations in genome: 37291630 37291624 37291618 37291617 37291595 37291579 37291574 37291573 37291559 37291550 37291548 37291541 37291540 37291529 37291526 Upstream nucleotide (in genome): g c t a a g c a a a c a a t t Upstream nucleotide summary: a: 7, c: 3, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): c c a t g g a g c c t a c c a Downstream nucleotide summary: a: 4, c: 6, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 2, at: 1, ca: 1, cc: 1, cg: 0, ct: 1, ga: 0, gc: 1, gg: 1, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr5:37291524-37291776 (-) tattattttaacataaggattaaaaaaatttagaaactcttattttgaattgtactgcaggcagaaatttcgaatttatattattcattttcaagttagtccaaggatattggcattaaaactccactaggcggccaggcacagtgacttacacctgtaatcccagcactttgggaggccaaggtgggcgaatcacgaggccaagagtttgagaccaacctggccaacatggtgaaaccccatctctactaaa >DW431557:17-268 (+) tattattttaacataaggattaaaaaaatttagaaactcttattttgaattgtactgcaggcagaaatttcgaatttatattattcattttcaagttagtccaaggatattggcattaaaactccactaggcggccaggcacagtggcttacgcctgtggtcccagcactttgggaggccagggtgggcgaatcacggggccgggagtttgagaccagcctggccagcgcggtgaggccccatctctgc-gaa End editing Edited EST: DW451548, type: ag Aligns to: chr5:142667684-142668007 (-+) All mismatches: ag (52), ag (67), ag (68), ag (98), ag (107), ag (131), ag (135), ag (137), ag (143), ag (145), ag (160), ag (176), ag (192), ag (255), ag (264), ag (267), ag (268), ag (273), ag (283), ag (312), Editing mismatches: 20, all mismatches: 20, alignment length: 325, cluster length: 260, total number of As: 71 Locations in RNA: 52 67 68 98 107 131 135 137 143 145 160 176 192 255 264 267 268 273 283 312 Locations in genome: 142667972 142667957 142667956 142667926 142667917 142667893 142667889 142667887 142667881 142667879 142667864 142667848 142667832 142667769 142667760 142667757 142667756 142667751 142667741 142667713 Upstream nucleotide (in genome): t t a c a g a c g a a t c c c t a g c g Upstream nucleotide summary: a: 6, c: 6, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): t a t g g c c t a c a g c g g a g g c g Downstream nucleotide summary: a: 4, c: 5, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 2, at: 1, ca: 0, cc: 2, cg: 3, ct: 1, ga: 1, gc: 1, gg: 2, gt: 0, ta: 2, tc: 0, tg: 1, tt: 1, other: 0 >chr5:142667684-142668007 (-) taacatcttaaatttccaatttctggccgggcgctatggctcacgcctgtaattccagcacgttgggaggccgaggtgggcagatcatcaagtcaggagttcgagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaaaattagccaggcgtggtggcacatgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaatctgggaggcagaggttgcagtaagccgagattgtgccactgtactccagcct-gggcaacagagtgaggctccgtctccaaaaaaaaaaaaaaaaa >DW451548:17-341 (+) taacatcttaaatttccaatttctggccgggcgctgtggctcacgcctgtggttccagcacgttgggaggccgaggtgggcggatcatcaggtcaggagttcgagaccagcctggccagcgtggtggagccctgtctctactagaaatacaaaaaaattggccaggcgtggtggcgcatgcctgtagtcccagctactcaggaggctgaggcaggagaatcgcttgaatctgggaggcggaggttgcggtgggccgggattgtgccgctgtactccagccttgggcaacagagtggggctccgtctccaaaaaaaaaaaaaaaaa End editing Edited EST: DW463134, type: ag Aligns to: chr5:159493343-159493689 (-+) All mismatches: ag (139), ag (207), ag (208), ag (235), ag (242), ag (264), ag (265), ag (274), ag (296), ag (305), ag (317), ag (334), ag (335), ga (342), ag (345), ag (355), Editing mismatches: 15, all mismatches: 16, alignment length: 347, cluster length: 217, total number of As: 58 Locations in RNA: 139 207 208 235 242 264 265 274 296 305 317 334 335 345 355 Locations in genome: 159493567 159493499 159493498 159493471 159493464 159493442 159493441 159493432 159493410 159493401 159493389 159493372 159493371 159493361 159493351 Upstream nucleotide (in genome): a a a a c t a t g g c c a c c Upstream nucleotide summary: a: 6, c: 5, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): t a c t g a t c a g g a g c g Downstream nucleotide summary: a: 4, c: 3, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 3, ca: 1, cc: 1, cg: 3, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr5:159493343-159493689 (-) taatttttaatatactaaatattgatagaatgcacataaatggaaatgctcttaaaatttttttttccagactatgaagggctgctgaaataaaagtttgggcacggtggctcacgcctgtaatccaaagccaaggtgggtggatcatcttgaggccgggagttcaagaccagcctggctaacatggtgaaactctgtctctactaaaaatacaaaaaattagccaggtgtggtggtgcatgcctgtaatcccagctactctggaggctgaggcaggagaattgcttgagcctgggaggcagaggttgtagtgagccaagattgcgccactgcactccagcctgggt >DW463134:17-363 (+) taatttttaatatactaaatattgatagaatgcacataaatggaaatgctcttaaaatttttttttccagactatgaagggctgctgaaataaaagtttgggcacggtggctcacgcctgtagtccaaagccaaggtgggtggatcatcttgaggccgggagttcaagaccagcctggctaacatggtgaggctctgtctctactaaaaatacaaaaagttagccgggtgtggtggtgcatgcctgtggtcccagctgctctggaggctgaggcaggaggattgcttgggcctgggaggcggaggttgtagtgagccgggattgcaccgctgcactccggcctgggt End editing Edited EST: CB959167, type: ag Aligns to: chr5:80572429-80572781 (-+) All mismatches: ag (132), ag (137), ag (168), ag (192), ag (193), ag (194), ag (200), ag (201), ag (202), ag (206), ag (219), ag (233), Editing mismatches: 12, all mismatches: 12, alignment length: 353, cluster length: 102, total number of As: 33 Locations in RNA: 132 137 168 192 193 194 200 201 202 206 219 233 Locations in genome: 80572652 80572647 80572616 80572592 80572591 80572590 80572584 80572583 80572582 80572578 80572565 80572551 Upstream nucleotide (in genome): c g c a a a a a a t t a Upstream nucleotide summary: a: 7, c: 2, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): c g t a a a a a a g g t Downstream nucleotide summary: a: 6, c: 1, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 6, ac: 0, ag: 0, at: 1, ca: 0, cc: 1, cg: 0, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr5:80572429-80572781 (-) gatcctgctactgcactttagcctgggtaacagagaacctgtctagaaaaagaaaaacaaatggcaaggccaggtgcagtggcacatgcctgtaatctcagcactttgggaggctgaggcaggcagatcacctgagaccaggagttcgagaccagcctggccaacatgatgcaaccctgtctgtagtaaaaaatacaaaaattagctgggcatggtagcgcgcatctgtaatcccagctacttggaaggctgaggcatgagaattgcttgaacctgggaggtggaggttgcagtgagccaagattgtgccactgcactccagcctgggtgacagagcgagaactcatctcaaa >CB959167:3-355 (+) gatcctgctactgcactttagcctgggtaacagagaacctgtctagaaaaagaaaaacaaatggcaaggccaggtgcagtggcacatgcctgtaatctcagcactttgggaggctgaggcaggcagatcgcctgggaccaggagttcgagaccagcctggccaacgtgatgcaaccctgtctgtagtaagggatacagggattggctgggcatggtggcgcgcatctgtagtcccagctacttggaaggctgaggcatgagaattgcttgaacctgggaggtggaggttgcagtgagccaagattgtgccactgcactccagcctgggtgacagagcgagaactcatctcaaa End editing Edited EST: AW009281, type: ga Aligns to: chr5:153800096-153800544 (-+) All mismatches: ga (69), ga (134), ga (142), ga (189), ga (207), ga (209), ga (212), ga (219), ga (233), ga (238), ga (242), ga (246), ga (263), ga (269), ga (286), ga (306), ga (319), ga (321), ga (330), ga (338), ga (344), ga (350), ga (354), ga (371), ga (372), ga (389), ga (396), gc (400), ga (407), ga (416), ga (426), ga (435), Editing mismatches: 31, all mismatches: 32, alignment length: 449, cluster length: 367, total number of Gs: 88 Locations in RNA: 69 134 142 189 207 209 212 219 233 238 242 246 263 269 286 306 319 321 330 338 344 350 354 371 372 389 396 407 416 426 435 Locations in genome: 153800481 153800416 153800408 153800361 153800343 153800341 153800338 153800331 153800317 153800312 153800308 153800304 153800287 153800281 153800264 153800244 153800231 153800229 153800220 153800212 153800206 153800200 153800196 153800179 153800178 153800161 153800154 153800143 153800134 153800124 153800115 Upstream nucleotide (in genome): a g a a a a a t t g c t g a t c a a t g a a t t g t t a a t t Upstream nucleotide summary: a: 13, c: 2, g: 5, t: 11, other: 0 Downstream nucleotide (in genome): t a t t a c g a c c g a a a t a a g g c a t a g a t a g a c t Downstream nucleotide summary: a: 13, c: 5, g: 6, t: 7, other: 0 Dinucleotide summary: aa: 5, ac: 1, ag: 3, at: 4, ca: 1, cc: 0, cg: 1, ct: 0, ga: 3, gc: 2, gg: 0, gt: 0, ta: 4, tc: 2, tg: 2, tt: 3, other: 0 >chr5:153800096-153800544 (-) tttagagaaagtctggaggtttactcaacaacgttcacaatcacaattgtacatggtaaatcagtctttcacaaaggcttatttttccaggcaggaggagaggctggtggtcttgagcttttggcctggaattccagtctgaattttcaaatattccctgcctccaacccctttgggatcctagtcttcaagccaataacagagcaggagtctgaccctgttctgttgcctggcacggctgaatcaaagccattctggaagcagatgttaaggtgaacttgtcacttggtatgtaggtccgactcccatcccagaggtggcagtgggccttggctcaagatcaagtttgaactaaaatattacttggatttttcacaaagagtgtccgttgaaagcaataaggaattccagaacagaactgcacttcttgtccctctctcacacttaca >AW009281:6-454 (+) tttagagaaagtctggaggtttactcaacaacgttcacaatcacaattgtacatggtaaatcaatctttcacaaaggcttatttttccaggcaggaggagaggctggtggtcttgagcttttggcctgaaattccaatctgaattttcaaatattccctgcctccaacccctttgggatcctaatcttcaagccaataacaaaacaagagtctaaccctgttctgttacctgacacagctaaatcaaagccattctgaaagcaaatgttaaggtgaacttatcacttggtatgtaggtccaactcccatcccaaaagtggcagtaggccttgactcaaaatcaaatttaaactaaaatattacttaaatttttcacaaagagtatccgttaaaaccaataaagaattccaaaacagaactacacttcttatccctctctcacacttaca End editing Edited EST: AY561705, type: ag Aligns to: chr5:130495586-130495837 (-+) All mismatches: ag (3), ag (36), ag (40), ag (41), ag (49), ag (78), ag (98), ag (104), ag (118), ag (129), ag (155), ct (165), ag (191), ag (217), ag (226), Editing mismatches: 14, all mismatches: 15, alignment length: 252, cluster length: 224, total number of As: 57 Locations in RNA: 3 36 40 41 49 78 98 104 118 129 155 191 217 226 Locations in genome: 130495835 130495802 130495798 130495797 130495789 130495760 130495740 130495734 130495720 130495709 130495683 130495647 130495621 130495612 Upstream nucleotide (in genome): t a t a c c a c a t t c c g Upstream nucleotide summary: a: 4, c: 5, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g g a g g g g t t g g c g g Downstream nucleotide summary: a: 1, c: 1, g: 10, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 3, at: 1, ca: 0, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 3, tt: 0, other: 0 >chr5:130495586-130495837 (-) atagtgccttgtgcctgtaatcccagcactttggaagttaaggtgggcagattgcccaagcgcaggagttcgagaccagcctggacaacattggagaagccccatctcaacaaaaaaatacaaaaattagccgggtgtggtggcatgtgcttgtagtcccagctccttgggtgggtgaggcaggaggatcacttcaacctgggaggtcgaggctgcagtgagctgagatcgtgccactgcactccagtctga >AY561705:1-252 (+) atggtgccttgtgcctgtaatcccagcactttggaggttggggtgggcggattgcccaagcgcaggagttcgagaccggcctggacaacattggagaggccccgtctcaacaaaaaagtacaaaaattggccgggtgtggtggcatgtgcttgtggtcccagcttcttgggtgggtgaggcaggaggatcgcttcaacctgggaggtcgaggctgcggtgagctgggatcgtgccactgcactccagtctga End editing Edited EST: DB271134, type: ag Aligns to: chr6:30700882-30701171 (-+) All mismatches: ag (70), ag (104), ag (110), ag (113), ag (156), ag (190), ag (191), ag (192), ag (219), ag (221), ag (222), ag (227), ag (248), ag (263), Editing mismatches: 14, all mismatches: 14, alignment length: 290, cluster length: 194, total number of As: 59 Locations in RNA: 70 104 110 113 156 190 191 192 219 221 222 227 248 263 Locations in genome: 30701102 30701068 30701062 30701059 30701016 30700982 30700981 30700980 30700953 30700951 30700950 30700945 30700924 30700909 Upstream nucleotide (in genome): c a a c a a a a t t a c c a Upstream nucleotide summary: a: 8, c: 4, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g g g g t a a t t a t g g c Downstream nucleotide summary: a: 3, c: 1, g: 6, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 2, at: 3, ca: 0, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 1, other: 0 >chr6:30700882-30701171 (-) gttaatcccaacatagcagcctgctttcagcctaactggtattaaaatagaagggtagaggccgggtgcagtggctaacgcctgtaatcccagcactttgggaagccgaagcaggtggatcacctgagataaggagttcaagaccagcctggccaatgtggtggaaccccatctctattaaaaacacaaaaattagctgagcgtggtggcaggcacctataatcccagatacatgggaggctgaggcaggagaattgcttgaacctgggagatggagattgcagtgagcc >DB271134:1-290 (+) gttaatcccaacatagcagcctgctttcagcctaactggtattaaaatagaagggtagaggccgggtgcggtggctaacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacctgagataaggagttcaagaccagcctggccagtgtggtggaaccccatctctattaaaaacacaagggttagctgagcgtggtggcaggcacctgtggtcccggatacatgggaggctgaggcgggagaattgcttgagcctgggagatggagattgcagtgagcc End editing Edited EST: DW463267, type: ag Aligns to: chr6:157722686-157723031 (-+) All mismatches: ag (131), ag (141), ag (166), ag (170), ag (171), ag (177), ag (196), ag (206), ag (208), ta (245), ta (246), ag (247), ag (250), ag (252), ag (253), ag (276), ag (288), ag (302), ag (318), ag (327), ag (339), ag (341), Editing mismatches: 20, all mismatches: 22, alignment length: 346, cluster length: 211, total number of As: 49 Locations in RNA: 131 141 166 170 171 177 196 206 208 247 250 252 253 276 288 302 318 327 339 341 Locations in genome: 157722917 157722907 157722882 157722878 157722877 157722871 157722852 157722842 157722840 157722801 157722798 157722796 157722795 157722772 157722760 157722746 157722730 157722721 157722709 157722707 Upstream nucleotide (in genome): g c c c a c t c t t t g a c g a c a t c Upstream nucleotide summary: a: 4, c: 8, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): a c a a t t g t g g g a a g a g g g c g Downstream nucleotide summary: a: 6, c: 2, g: 9, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 1, ca: 2, cc: 1, cg: 3, ct: 2, ga: 3, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 4, tt: 0, other: 0 >chr6:157722686-157723031 (-) tcccaccctcaccaactcctttgcttattgttcctctcctcctggactgccttttttcttcttttgttgagacggagtcttgctctatcgcccaggctggagtgcagtgtcatgaacttggctcactgcaacctccgcctccagggttcaagcaattctcatgcctctgcctcctgagtagctgggaccataggcacacaccaccacacccggctaatttttgtatttttagtagaaatggggtttcactgtgttggccaggctggtctcgaacttctgacctcaagtgatccacaaactcagcctccaaagtgctgggattacaggtgtgagccactgcgtccag >DW463267:17-362 (+) tcccaccctcaccaactcctttgcttattgttcctctcctcctggactgccttttttcttcttttgttgagacggagtcttgctctatcgcccaggctggagtgcagtgtcatggacttggctcgctgcaacctccgcctccagggttcgagcggttctcgtgcctctgcctcctgagtggctgggaccgtgggcacacaccaccacacccggctaatttttgtatttaaggtggggatggggtttcactgtgttggccgggctggtctcggacttctgacctcaggtgatccacaaactcggcctccaaggtgctgggattgcgggtgtgagccactgcgtccag End editing Edited EST: DW464864, type: ag Aligns to: chr6:155047688-155048033 (-+) All mismatches: ag (36), ag (67), ag (77), ag (85), ag (86), ag (91), ag (101), ag (103), ag (105), ag (117), ag (141), ag (161), ag (165), ag (167), ag (190), ag (194), ag (203), ag (213), Editing mismatches: 18, all mismatches: 18, alignment length: 346, cluster length: 178, total number of As: 47 Locations in RNA: 36 67 77 85 86 91 101 103 105 117 141 161 165 167 190 194 203 213 Locations in genome: 155048014 155047983 155047973 155047965 155047964 155047959 155047949 155047947 155047945 155047933 155047909 155047889 155047885 155047883 155047860 155047856 155047847 155047837 Upstream nucleotide (in genome): a c c c a c a c t c t c t t g c c c Upstream nucleotide summary: a: 3, c: 10, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): t c g a g g c t g t g c t g g g c g Downstream nucleotide summary: a: 1, c: 4, g: 9, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 1, ca: 1, cc: 3, cg: 4, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 3, tt: 1, other: 0 >chr6:155047688-155048033 (-) acagtggctcacacctgtaattgcattgttttgggaggtccaggcggatcacttgaggccaggagttcaagaccagccttggcaacatagtgagactcccatctctgtataaaaatttaaaattagctggtcgtggtggtgcacacctatagtactagctactcaggaggctgaggcaggaggatcactcgagcccaggaatttgaggctacagtgagccatgacagttgatatgatttggatgtttgtccccctccaaatctcatgtggaaatacgattcccaatgttggaggtgggacctggtgggaggtgattgaatcatgggggcagagcccccgtgaatgg >DW464864:17-362 (+) acagtggctcacacctgtagttgcattgttttgggaggtccaggcggatcgcttgaggccgggagttcgggaccggccttggcagcgtggtgagactcccgtctctgtataaaaatttaaaattggctggtcgtggtggtgcacgcctgtggtactagctactcaggaggctggggcgggaggatcgctcgagcccgggaatttgaggctacagtgagccatgacagttgatatgatttggatgtttgtccccctccaaatctcatgtggaaatacgattcccaatgttggaggtgggacctggtgggaggtgattgaatcatgggggcagagcccccgtgaatgg End editing Edited EST: BM988697, type: ag Aligns to: chr6:150143233-150143655 (-+) All mismatches: ag (20), ag (21), ag (25), ag (33), ag (46), ag (89), ag (95), ag (96), ag (183), ag (187), ag (195), ag (276), ag (293), ag (339), ag (345), ag (346), ag (365), Editing mismatches: 17, all mismatches: 17, alignment length: 424, cluster length: 346, total number of As: 77 Locations in RNA: 20 21 25 33 46 89 95 96 183 187 195 276 293 339 345 346 365 Locations in genome: 150143637 150143636 150143632 150143624 150143611 150143568 150143562 150143561 150143474 150143470 150143462 150143381 150143364 150143318 150143312 150143311 150143292 Upstream nucleotide (in genome): t a c t a c c a g t t t t t c a c Upstream nucleotide summary: a: 4, c: 5, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): a g g c g g a g g g c c g g a g g Downstream nucleotide summary: a: 3, c: 3, g: 11, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 4, at: 0, ca: 2, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 3, tg: 3, tt: 0, other: 0 >chr6:150143233-150143655 (-) tttttttttttttttttt-aagacaggatcttactttgccacccaagctggagtacagtttaagagctcactgaagcctctacctcccagactcaagtgatccttctgctttagcctccctaagtattgggattataggcatgagccactgtgcccagcctcacttctcttttttttttttgagataggcccttacactgtcacccaggctggagtgcagtagcctgatcatggctcataacagcctcaactttctgggctcaggtgattctcctacttcagcctcccgagtagctgggactgcaggtgcatgccacaactggctaataattttttgtagagacaaggtctcgccatgttgcccaggctggtctcgaactcctgggatcaagcaatttgcccacctctgccttccaaagtgctg >BM988697:1-424 (+) ttttttttttttttttttggggacgggatcttgctttgccacccaggctggagtacagtttaagagctcactgaagcctctacctcccggactcgggtgatccttctgctttagcctccctaagtattgggattataggcatgagccactgtgcccagcctcacttctcttttttttttttgggatgggcccttgcactgtcacccaggctggagtgcagtagcctgatcatggctcataacagcctcaactttctgggctcaggtgattctcctgcttcagcctcccgagtggctgggactgcaggtgcatgccacaactggctaataattttttgtggagacggggtctcgccatgttgcccgggctggtctcgaactcctgggatcaagcaatttgcccacctctgccttccaaagtgctg End editing Edited EST: CB162100, type: ag Aligns to: chr6:150045721-150046297 (-+) All mismatches: ga (79), ag (263), ag (278), ag (300), ag (301), ag (347), ag (369), ag (370), ag (379), ag (380), ag (391), ag (398), ag (411), ag (414), ag (415), ag (430), ag (438), ag (440), ag (441), ag (446), ag (450), ag (463), ag (480), ag (482), ag (502), ag (510), ag (511), ag (543), ag (550), ag (551), Editing mismatches: 29, all mismatches: 30, alignment length: 577, cluster length: 289, total number of As: 84 Locations in RNA: 263 278 300 301 347 369 370 379 380 391 398 411 414 415 430 438 440 441 446 450 463 480 482 502 510 511 543 550 551 Locations in genome: 150046035 150046020 150045998 150045997 150045951 150045929 150045928 150045919 150045918 150045907 150045900 150045887 150045884 150045883 150045868 150045860 150045858 150045857 150045852 150045848 150045835 150045818 150045816 150045796 150045788 150045787 150045755 150045748 150045747 Upstream nucleotide (in genome): a c t a a c a a a c a a t a c t t a c t g c a c c a a a a Upstream nucleotide summary: a: 15, c: 8, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): a g a t g a c a c c t t a c g t a t g c g a c g a g g a c Downstream nucleotide summary: a: 9, c: 7, g: 8, t: 5, other: 0 Dinucleotide summary: aa: 3, ac: 5, ag: 3, at: 4, ca: 3, cc: 1, cg: 4, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 3, tc: 1, tg: 0, tt: 1, other: 0 >chr6:150045721-150046297 (-) gtatattttaacagcattacatttcatgccaattgacaagttttgccaattttaataagaaactaagctttatgtaatgtaacaccgtaatttatgaatttgttcattgtcactgcctttattcatgaaactgtcaaatagagtgtctttcaagggttgcaggatcttagagatagaaagtaccttggtgatcatctccagcctaaatttcatcatcccttctatggtattcccaacaaattatcatccaacctatacttaaaaacatatggtggccaggcatggtggctcacgcctgtaatgctagcactttgggaggccgaggtgggtgaagcacctgaggtcaagagttcgagatcagcctggccaacatggcgaaaccccgtctccactaaaaatgcaaaaaaaaaattaaccgggcgtggtggcaggcatctataatcccagctacttgggaggctgaggcaggagaattgctcaaacccgggaggcagaggttgcagtgacccaagatcgtgccacttcactccagcctgggcaaaagagcaaaacgccatctcaaaaaatatacatatat >CB162100:1-577 (+) gtatattttaacagcattacatttcatgccaattgacaagttttgccaattttaataagaaactaagctttatgtaatataacaccgtaatttatgaatttgttcattgtcactgcctttattcatgaaactgtcaaatagagtgtctttcaagggttgcaggatcttagagatagaaagtaccttggtgatcatctccagcctaaatttcatcatcccttctatggtattcccaacaaattatcatccaacctatacttaagaacatatggtggccgggcatggtggctcacgcctgtggtgctagcactttgggaggccgaggtgggtgaagcacctgaggtcaggagttcgagatcagcctggccggcatggcgaggccccgtctccgctaaaagtgcaaaaaaaaagttggccgggcgtggtggcgggcatctgtggtcccggctgcttgggaggctggggcaggagaattgctcgagcccgggaggcagaggttgcggtgacccgggatcgtgccacttcactccagcctgggcaaaggagcaaggcgccatctcaaaaaatatacatatat End editing Edited EST: BF059630, type: ga Aligns to: chr6:41900214-41900782 (-+) All mismatches: ga (150), ga (320), ga (321), ga (328), ga (348), ga (356), ga (372), ga (389), ga (398), ga (402), ga (408), ga (410), ga (412), ga (416), ga (419), ga (421), ga (427), ga (431), ga (437), ga (438), ga (440), ga (452), ga (454), ga (464), ga (465), ga (469), ga (471), ga (472), ga (480), ga (481), ga (486), ga (491), ga (494), ga (495), ag (505), ga (506), ga (507), ga (509), ga (510), ga (515), ga (516), ga (529), ga (547), ga (552), ga (560), ga (561), ga (564), ga (566), ga (567), Editing mismatches: 48, all mismatches: 49, alignment length: 569, cluster length: 418, total number of Gs: 120 Locations in RNA: 150 320 321 328 348 356 372 389 398 402 408 410 412 416 419 421 427 431 437 438 440 452 454 464 465 469 471 472 480 481 486 491 494 495 506 507 509 510 515 516 529 547 552 560 561 564 566 567 Locations in genome: 41900633 41900463 41900462 41900455 41900435 41900427 41900411 41900394 41900385 41900381 41900375 41900373 41900371 41900367 41900364 41900362 41900356 41900352 41900346 41900345 41900343 41900331 41900329 41900319 41900318 41900314 41900312 41900311 41900303 41900302 41900297 41900292 41900289 41900288 41900277 41900276 41900274 41900273 41900268 41900267 41900254 41900236 41900231 41900223 41900222 41900219 41900217 41900216 Upstream nucleotide (in genome): a a g t c g c t c t c g c a t t g t c g a a g t g t t g c g t c t g a g a g t g a t g a g a t g Upstream nucleotide summary: a: 10, c: 8, g: 16, t: 14, other: 0 Downstream nucleotide (in genome): a g a a g a c a c a g c a c t g g c g a c g c g t t g c g c t c g a g a g c g t g t a g a t g a Downstream nucleotide summary: a: 13, c: 11, g: 17, t: 7, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 6, at: 1, ca: 1, cc: 3, cg: 4, ct: 0, ga: 8, gc: 5, gg: 1, gt: 2, ta: 3, tc: 1, tg: 6, tt: 4, other: 0 >chr6:41900214-41900782 (-) caataaatatctgtctttgcctttatccacagtgacctgacacaatagccatagaaaaagtactcacaccaagccccagctggggactgggaatgctagcatatggtatctcaagttggctctcagaactaaacagggataagggcctagaatggaagagggaaccagccagaccctcagtccttcctgtcctggactgggagccacagatgtccctgtgatctgtcactgccctgatctgggtcttcagccattaaagctcagtgtcatcttcagtcaccaacgggggtcttggtgtccttccaaacccctttggccaggacagctgactgttttcctcactccacggtgatgggaacatcttccacatcgcgggggactgcactctgaagctcacgcctgatttcgggcgatagctgtggatggggctgcagccggagcagttctaagagggcctctttctggtctgtggccaagtcggccttgtagcgctggaccaaagtcaggaggcactggtgccacagcacaggcagttcacgcttctctgtccggaaccccaggaagtggaa >BF059630:1-569 (+) caataaatatctgtctttgcctttatccacagtgacctgacacaatagccatagaaaaagtactcacaccaagccccagctggggactgggaatgctagcatatggtatctcaagttggctctcagaactaaacagggataagggcctaaaatggaagagggaaccagccagaccctcagtccttcctgtcctggactgggagccacagatgtccctgtgatctgtcactgccctgatctgggtcttcagccattaaagctcagtgtcatcttcagtcaccaacgggggtcttggtgtccttccaaacccctttggccaaaacagctaactgttttcctcactccacagtgatggaaacatcttccacatcacgggggactgcactctaaanctcacacctaatttcagacaataactatagatggagctacanccaaaacagttctaagaagacctctttctaatctataaccaantcaaccttatagcactaaaccaaagtcgaaaaacactaatgccacagcacaagcagttcacgcttctctatccgaaaccccaaaaaataaaa End editing Edited EST: CN415000, type: ag Aligns to: chr7:105512484-105512824 (-+) All mismatches: ag (24), ag (137), ag (144), ag (173), ag (181), ag (195), ag (204), ag (205), ag (229), ag (230), ag (238), ag (239), ag (265), ag (271), ag (326), ag (333), ag (337), ag (341), ag (342), ag (349), Editing mismatches: 20, all mismatches: 20, alignment length: 341, cluster length: 326, total number of As: 92 Locations in RNA: 24 137 144 173 181 195 204 205 229 230 238 239 265 271 326 333 337 341 342 349 Locations in genome: 105512824 105512711 105512704 105512675 105512667 105512653 105512644 105512643 105512619 105512618 105512610 105512609 105512583 105512577 105512522 105512515 105512511 105512507 105512506 105512499 Upstream nucleotide (in genome): n t a c c c t a t a a a c t g c g c a c Upstream nucleotide summary: a: 6, c: 7, g: 2, t: 4, other: 1 Downstream nucleotide (in genome): t a c g g t a c a a a a c g g g g a g c Downstream nucleotide summary: a: 7, c: 4, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 1, at: 0, ca: 1, cc: 2, cg: 3, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 3, tc: 0, tg: 1, tt: 0, other: 1 >chr7:105512484-105512824 (-) atgaacattggtgtcatatatttttaatagactaaactcaggaagagaagttaggctggaaatgtgaaataagaattattttggtttggccaggcatggtggctcacgcctgtaatcccaacactttgggaggctggggtgggtggatcaggaggtcaggagatcgagaccatcctggctaacatggtgaaaccccatctctactaaaaatacaaaaaattagccgggcgtggtggcacgcacctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccaagatcgcaccactgcactccagc >CN415000:24-364 (+) gtgaacattggtgtcatatatttttaatagactaaactcaggaagagaagttaggctggaaatgtgaaataagaattattttggtttggccaggcatggtggctcacgcctgtgatcccagcactttgggaggctggggtgggtggatcgggaggtcgggagatcgagaccgtcctggctggcatggtgaaaccccatctctactggaaatacaggaaattagccgggcgtggtggcacgcgcctgtggtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggcggggcttgcggtgggccgggatcgcgccactgcactccagc End editing Edited EST: DA132919, type: ag Aligns to: chr7:55523021-55523564 (-+) All mismatches: ag (57), ag (88), ag (103), ag (134), ag (160), ag (162), ag (187), ag (209), ag (291), ag (294), ag (308), ag (313), ag (321), ag (332), ag (333), ag (389), ag (424), ag (427), ag (456), ag (457), ag (462), ag (470), ag (490), ag (491), ag (507), ag (522), Editing mismatches: 26, all mismatches: 26, alignment length: 544, cluster length: 466, total number of As: 109 Locations in RNA: 57 88 103 134 160 162 187 209 291 294 308 313 321 332 333 389 424 427 456 457 462 470 490 491 507 522 Locations in genome: 55523513 55523482 55523467 55523436 55523410 55523408 55523383 55523361 55523279 55523276 55523262 55523257 55523249 55523238 55523237 55523181 55523146 55523143 55523114 55523113 55523108 55523100 55523080 55523079 55523063 55523048 Upstream nucleotide (in genome): a t a t t a t g t c t t t g a t a t c a t t t a t t Upstream nucleotide summary: a: 7, c: 2, g: 2, t: 15, other: 0 Downstream nucleotide (in genome): g t g g a t t t c t c g g a g t g g a t g g a a t t Downstream nucleotide summary: a: 5, c: 2, g: 10, t: 9, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 4, at: 2, ca: 1, cc: 0, cg: 0, ct: 1, ga: 1, gc: 0, gg: 0, gt: 1, ta: 2, tc: 2, tg: 6, tt: 5, other: 0 >chr7:55523021-55523564 (-) tattgcctaggttttcttctagggtttttatggttttaggtcttacgtttaagtatttaatccatcttgagttaatttttgtataaggtgtaaggaaaggacccagtttcagctttctgcatatggctagccagttttctcaacaccatttattaaatagggaatcctttccccattgcttatttttgtcagatttgtgaaagatcagatggttgtagatgtgtggtgttatttctgaggtctctgttctgttccatttgtctatatatctgttttggtaccagtaccatgctgtttttgttactgtagccttgtagtatagtttgaagtcaggtagcatgatgcctctacctttgttctttttgcttagaattgtcttggctatgtgggctcttttttggttccatatgaaattgaaagtagtttttttccaattctgtgaagaaagtcaatggtagcttgatagggactgcattgaatctataaattactttgggcagtatggattttcacaatatttattcttcctatccatgagcatgga >DA132919:6-549 (+) tattgcctaggttttcttctagggtttttatggttttaggtcttacgtttaggtatttaatccatcttgagttaatttttgtgtaaggtgtaaggaagggacccagtttcagctttctgcatatggctggccagttttctcaacaccatttattgagtagggaatcctttccccattgcttgtttttgtcagatttgtgaaaggtcagatggttgtagatgtgtggtgttatttctgaggtctctgttctgttccatttgtctatatatctgttttggtaccagtgccgtgctgtttttgttgctgtggccttgtggtatagtttggggtcaggtagcatgatgcctctacctttgttctttttgcttagaattgtcttggctgtgtgggctcttttttggttccatatgaaattgaaggtggtttttttccaattctgtgaagaaagtcggtggtggcttgatggggactgcattgaatctatggattactttgggcagtgtggattttcacaatgtttattcttcctatccatgagcatgga End editing Edited EST: DA081173, type: ag Aligns to: chr7:158417125-158417632 (-+) All mismatches: ag (318), ag (367), ag (380), ag (381), ag (384), ag (398), ag (406), ag (407), ag (410), ag (414), ag (420), ag (426), Editing mismatches: 12, all mismatches: 12, alignment length: 507, cluster length: 109, total number of As: 21 Locations in RNA: 318 367 380 381 384 398 406 407 410 414 420 426 Locations in genome: 158417315 158417266 158417253 158417252 158417249 158417235 158417227 158417226 158417223 158417219 158417213 158417207 Upstream nucleotide (in genome): c g c a t c c a c t t c Upstream nucleotide summary: a: 2, c: 6, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g c a g g g a g g g c t Downstream nucleotide summary: a: 2, c: 2, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 2, cc: 0, cg: 3, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr7:158417125-158417632 (-) catacattttacttctacatatgttattcccaaaattcattgtcattatttttgttttaaactgttaattaactttttaaaagatttaaacatgagagaaaattgtcttttaagtttatccacgtattcactatttctggcaatgttctttcctttgtgcagtttcagatttccatatggtgtcattttctttcttttaaagagctttctttaatatctctttagcatatatctgctagttatgagttttctcggcttttgattatctggaagagtattttgccttcatttttgaaggtttaaaaaattttaaagacagtgtcttgctctgtcacccaggctcaatcatggctcactgcaaccttgacctcctgggctcaagtagtcctcctgcctcagcctcccaagcagctagagctactggcatgtaccaccacatctggcttttttttttttttttttttttgtaaagacagggatttgggccgggcgtggtggctcacgcctg >DA081173:1-507 (+) catacattttacttctacatatgttattcccaaaattcattgtcattatttttgttttaaactgttaattaactttttaaaagatttaaacatgagagaaaattgtcttttaagtttatccacgtattcactatttctggcaatgttctttcctttgtgcagtttcagatttccatatggtgtcattttctttcttttaaagagctttctttaatatctctttagcatatatctgctagttatgagttttctcggcttttgattatctggaagagtattttgccttcatttttgaaggtttaaaaaattttaaagacggtgtcttgctctgtcacccaggctcaatcatggctcactgcaaccttggcctcctgggctcgggtggtcctcctgcctcggcctcccgggcggctggagctgctggcgtgtaccaccacatctggcttttttttttttttttttttt-gtaaagacagggatttgggccgggcgtggtggctcacgcctg End editing Edited EST: DA108964, type: ag Aligns to: chr7:71446030-71446618 (-+) All mismatches: ag (40), ag (63), ag (92), ag (119), ag (133), ag (142), ag (150), ag (164), ag (166), ag (178), ag (196), ag (206), Editing mismatches: 12, all mismatches: 12, alignment length: 589, cluster length: 167, total number of As: 32 Locations in RNA: 40 63 92 119 133 142 150 164 166 178 196 206 Locations in genome: 71446579 71446556 71446527 71446500 71446486 71446477 71446469 71446455 71446453 71446441 71446423 71446413 Upstream nucleotide (in genome): a a t a t c c c a c c a Upstream nucleotide summary: a: 5, c: 5, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): c g g t g g c a c g g g Downstream nucleotide summary: a: 1, c: 3, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 2, at: 1, ca: 1, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr7:71446030-71446618 (-) tcaagctgtagtgcagtggtgtgatgtctgctcactgtaacctcctccgcctcccaggttcaagcgattattgtgcctcatcctcctgagtagttgggactacaggtgtgcctggctaatttttgtatttttagtagaggcagagtttcaccatgctggtctcaaactcttgacctcaggtgatccttccgcctcagcctcccaaagtgctgggattgcaggcatgaaccaccacccccagcccctcttgggtttttatggatgcctcacgatgtcagcattttgtcccccagggtataggggaggaccctctctggaaagggtcttaagacccacaatcagaaaggcaggggaagattagagtcctgcctttgggcagatgaaaggggggcaggggaaaatcagagagattctgtctcctgagacttgttcctaagatctaacacactaaatattataacaaaagactataacgagggctaagggagttatggaccaggaaccatggataaaaactaatatatatcatagcactgcggtgaatgattcccggtgtccacattcccactgtagactcctgtagtcttag >DA108964:1-589 (+) tcaagctgtagtgcagtggtgtgatgtctgctcactgtagcctcctccgcctcccaggttcaggcgattattgtgcctcatcctcctgagtggttgggactacaggtgtgcctggctagtttttgtatttttggtagaggcggagtttcgccatgctggtctcgagctcttgacctcgggtgatccttccgcctcggcctcccaaggtgctgggattgcaggcatgaaccaccacccccagcccctcttgggtttttatggatgcctcacgatgtcagcattttgtcccccagggtataggggaggaccctctctggaaagggtcttaagacccacaatcagaaaggcaggggaagattagagtcctgcctttgggcagatgaaaggggggcaggggaaaatcagagagattctgtctcctgagacttgttcctaagatctaacacactaaatattataacaaaagactataacgagggctaagggagttatggaccaggaaccatggataaaaactaatatatatcatagcactgcggtgaatgattcccggtgtccacattcccactgtagactcctgtagtcttag End editing Edited EST: DA697165, type: ag Aligns to: chr7:40166367-40166927 (-+) All mismatches: ag (2), ag (27), ag (28), ag (36), ag (37), ag (43), ag (64), ag (71), ag (80), ag (97), ag (99), ag (106), ag (156), ag (316), ag (318), ag (324), ag (345), ag (356), ag (358), ag (362), ag (384), ag (390), ag (394), ag (417), ag (422), ag (426), ag (437), ag (450), ag (457), ag (487), Editing mismatches: 30, all mismatches: 30, alignment length: 562, cluster length: 486, total number of As: 141 Locations in RNA: 2 27 28 36 37 43 64 71 80 97 99 106 156 316 318 324 345 356 358 362 384 390 394 417 422 426 437 450 457 487 Locations in genome: 40166926 40166901 40166900 40166892 40166891 40166885 40166864 40166857 40166848 40166831 40166829 40166822 40166772 40166612 40166610 40166604 40166583 40166572 40166570 40166566 40166544 40166538 40166534 40166511 40166506 40166502 40166491 40166478 40166471 40166441 Upstream nucleotide (in genome): a t a c a c a t t c t a a c c a a a t c t c t a c a c g g c Upstream nucleotide summary: a: 11, c: 10, g: 2, t: 7, other: 0 Downstream nucleotide (in genome): t a c a c c t t g t t g a c g c a t g g g g g t t c g g t g Downstream nucleotide summary: a: 4, c: 6, g: 11, t: 9, other: 0 Dinucleotide summary: aa: 2, ac: 4, ag: 1, at: 4, ca: 1, cc: 2, cg: 5, ct: 2, ga: 0, gc: 0, gg: 1, gt: 1, ta: 1, tc: 0, tg: 4, tt: 2, other: 0 >chr7:40166367-40166927 (-) aattcttctgcctcagcctcccaagtaactgggacaacaggcacgcaccaccacaccctgctaattttttatatttggtagagatggggtttcaccatattggcaaggctggtctcgaactcctgacctcgtgatctgcccacctcggcctcccaaagtgctgagattacaggcctaagccaccgttcctggcctatagtactcttaaaagcagaacatatacttagatataagtaggtatatagaagtaaatgtctccaaaaggtagtgtaggacaatacatttgaaaattggctttaacccatcctggctaacacagtgaaaccccgtctctactaaaaataaaaaaaaaaaaatagccaggcatggtggcgggcgcctgtagtcccagctagtcgggaggctgaggcaggagaatggcatgaacccgggaggcagaggttgcagtgagttaagatggcgccactgcactccagcctgggcgacagagcgagactctgtctcaaaataaaaaaaaaaaaaagaaaa-tcggctttatttaattagggttaactcttctca >DA697165:1-562 (+) agttcttctgcctcagcctcccaagtggctgggacggcaggcgcgcaccaccacaccctgctagttttttgtatttggtggagatggggtttcaccgtgttggcagggctggtctcgaactcctgacctcgtgatctgcccacctcggcctcccagagtgctgagattacaggcctaagccaccgttcctggcctatagtactcttaaaagcagaacatatacttagatataagtaggtatatagaagtaaatgtctccaaaaggtagtgtaggacaatacatttgaaaattggctttaacccatcctggctaacgcggtgaagccccgtctctactaaaaatagaaaaaaaaaagtggccgggcatggtggcgggcgcctgtggtcccggctggtcgggaggctgaggcaggagagtggcgtgagcccgggaggcggaggttgcagtgggttaaggtggcgccactgcactccagcctgggcgacggagcgagactctgtctcaaaataaaaaaaaaaaaaagaaaaatcggctttatttaattagggttaactcttctca End editing Edited EST: DA597863, type: ag Aligns to: chr7:55523257-55523791 (-+) All mismatches: ag (7), ag (8), ag (18), ag (32), ag (51), ag (79), ag (92), ag (131), ag (137), ag (249), ag (279), ag (280), ag (287), ag (311), ag (314), ag (333), ag (349), ag (445), ag (459), ag (466), ag (492), ag (494), ag (496), ag (517), ag (531), Editing mismatches: 25, all mismatches: 25, alignment length: 536, cluster length: 524, total number of As: 106 Locations in RNA: 7 8 18 32 51 79 92 131 137 249 279 280 287 311 314 333 349 445 459 466 492 494 496 517 531 Locations in genome: 55523785 55523784 55523774 55523760 55523741 55523713 55523700 55523661 55523655 55523544 55523514 55523513 55523506 55523482 55523479 55523460 55523444 55523348 55523334 55523327 55523301 55523299 55523297 55523276 55523262 Upstream nucleotide (in genome): t a t t t t c t a t t a t t a c c t t g t t t c t Upstream nucleotide summary: a: 4, c: 4, g: 1, t: 16, other: 0 Downstream nucleotide (in genome): a g g g g g c g t g a g a t g g t g t g t t t t c Downstream nucleotide summary: a: 3, c: 2, g: 12, t: 8, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 3, at: 1, ca: 0, cc: 1, cg: 1, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 3, tc: 1, tg: 7, tt: 5, other: 0 >chr7:55523257-55523791 (-) ttgtttaagttctttgtagattctggatattagccctttgtcagatggatagattgtaaaaattttctcccgttctgtaggttgcctgttcactctgatgatagtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtctattttggc-ttttgttgccattgcttttggagtttgagtcatgaagtctttgcccatgcctatgtcctgaatggtattgcctaggttttcttctagggtttttatggttttaggtcttacgtttaagtatttaatccatcttgagttaatttttgtataaggtgtaaggaaaggacccagtttcagctttctgcatatggctagccagttttctcaacaccatttattaaatagggaatcctttccccattgcttatttttgtcagatttgtgaaagatcagatggttgtagatgtgtggtgttatttctgaggtctctgttctgttccatttgtctatatatctgttttggtaccagtaccatgctgtttttgttactgta >DA597863:1-536 (+) ttgtttgggttctttgtggattctggatattggccctttgtcagatggatggattgtaaaaattttctcccgttctgtgggttgcctgttcgctctgatgatagtttcttttgctgtgcagaagctctttggtttagttagatcccatttgtctattttggcnttttgttgccattgcttttggagtttgagtcatgaagtctttgcccatgcctatgtcctgaatggtattgcctaggttttcttctggggtttttatggttttaggtcttacgtttgggtatttgatccatcttgagttaatttttgtgtagggtgtaaggaaaggacccggtttcagctttctgcgtatggctagccagttttctcaacaccatttattaaatagggaatcctttccccattgcttatttttgtcagatttgtgaaagatcagatggttgtggatgtgtggtgttgtttctggggtctctgttctgttccatttgtctgtgtgtctgttttggtaccagtaccgtgctgtttttgttgctgta End editing Edited EST: DW417637, type: ag Aligns to: chr7:77322065-77322353 (-+) All mismatches: ag (25), ag (35), ag (43), ag (44), ag (74), ag (103), ag (108), ag (134), ag (138), ag (141), ag (143), ag (187), ag (204), ag (209), ag (247), ag (252), at (297), Editing mismatches: 16, all mismatches: 17, alignment length: 289, cluster length: 228, total number of As: 60 Locations in RNA: 25 35 43 44 74 103 108 134 138 141 143 187 204 209 247 252 Locations in genome: 77322345 77322335 77322327 77322326 77322296 77322267 77322262 77322236 77322232 77322229 77322227 77322183 77322166 77322161 77322123 77322118 Upstream nucleotide (in genome): t c t a c c t t a a t t t a a c Upstream nucleotide summary: a: 5, c: 4, g: 0, t: 7, other: 0 Downstream nucleotide (in genome): c t a t g g g c a t c c g t g c Downstream nucleotide summary: a: 2, c: 5, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 3, ca: 0, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 4, tg: 2, tt: 0, other: 0 >chr7:77322065-77322353 (-) ggccgggtacagtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcacctgaggtcaggagtttgagaccagcctagccaacatggtgaaactttgtctctactaaaaatacaaaaattagctgggcatggtggcacgtccttgtagtccagctactcgggaggctgtggtagagaatcgcttgaatctgggagacggaggttgcagcgagccaagatcacgccactgcactccagcctgggcgacagaatgagactctgtctcaaaaaaaaa >DW417637:17-305 (+) ggccgggtgcagtggctcgtgcctgtggtcccagcactttgggaggccgaggcaggcggatcacctgaggtcaggagtttgagaccggcctggccaacatggtgaaactttgtctctgctagaagtgcaaaaattagctgggcatggtggcacgtccttgtagtccagctgctcgggaggctgtggtggagagtcgcttgaatctgggagacggaggttgcagcgagccaggatcgcgccactgcactccagcctgggcgacagaatgagactctgtctctaaaaaaaa End editing Edited EST: DW421961, type: ag Aligns to: chr7:5538248-5538528 (-+) All mismatches: ag (89), tc (104), ag (108), ag (124), ag (158), ag (161), ag (162), ag (204), ag (210), ag (214), ag (218), ag (231), ag (280), ag (282), ag (285), Editing mismatches: 14, all mismatches: 15, alignment length: 281, cluster length: 197, total number of As: 56 Locations in RNA: 89 108 124 158 161 162 204 210 214 218 231 280 282 285 Locations in genome: 5538455 5538436 5538420 5538386 5538383 5538382 5538340 5538334 5538330 5538326 5538313 5538264 5538262 5538259 Upstream nucleotide (in genome): c a a t c a t c t c c c c c Upstream nucleotide summary: a: 3, c: 8, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): a g c c a a g g c g g c c c Downstream nucleotide summary: a: 3, c: 6, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 0, ca: 2, cc: 3, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 1, tt: 0, other: 0 >chr7:5538248-5538528 (-) gatcttgaaaaattacccaaaatgggtttgggcatggtggctcactcctgtaatcccagcagtttgggaggccaaggtgtgcggatcatctaaggtcaggagttggaaaccagtctggccaacatggtaaaactctgtttctaccaaaaacatacagaaattagcggggcgtgggagcaggcacctgtagtcccagctactcaggaggctgaggcaggagaattgctctttacccgggaggcagaggttgcagtgagccagatcacaccactgcactccag >DW421961:16-296 (+) gatcttgaaaaattacccaaaatgggtttgggcatggtggctcactcctgtaatcccagcagtttgggaggccgaggtgtgcggatcacctagggtcaggagttggaagccagtctggccaacatggtaaaactctgtttctgccggaaacatacagaaattagcggggcgtgggagcaggcacctgtggtcccggctgctcgggaggctgaggcgggagaattgctctttacccgggaggcagaggttgcagtgagccagatcgcgccgctgcactccag End editing Edited EST: DW422521, type: ag Aligns to: chr7:47470342-47470622 (-+) All mismatches: ag (15), ag (51), ag (73), ag (112), ag (119), ag (136), ag (142), ag (150), ag (179), ag (189), ag (221), ag (225), Editing mismatches: 12, all mismatches: 12, alignment length: 281, cluster length: 211, total number of As: 54 Locations in RNA: 15 51 73 112 119 136 142 150 179 189 221 225 Locations in genome: 47470621 47470585 47470563 47470524 47470517 47470500 47470494 47470486 47470457 47470447 47470415 47470411 Upstream nucleotide (in genome): g c c a c t t a t t a c Upstream nucleotide summary: a: 3, c: 4, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g c g c a a c t t c c g Downstream nucleotide summary: a: 2, c: 5, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 1, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 0, tt: 1, other: 0 >chr7:47470342-47470622 (-) gaggccaggcgcggtggctcatgcctgtgatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagttcgagaccagcctggccaacatggcaaaactccgtctctactaaaaatacaaaaaaattagctgggtgtggtggcatgcacctgtattcccagctactcgggaggctgaggcacgagaatcgcttgaacccaggcggtggaggttgtagtgagctgagatcatgccactgcactctaacctggatgacagagggagactcc >DW422521:14-294 (+) ggggccaggcgcggtggctcatgcctgtgatcccagcgctttgggaggccaaggcgggcggatcacctgaggtcaggagttcgagaccagcctggccagcatggcgaaactccgtctctactgaaaatgcaaaaaagttagctgggtgtggtggcatgcacctgtgttcccagctgctcgggaggctgaggcacgagaatcgcttgagcccgggcggtggaggttgtagtgagctgagatcatgccactgcactctaacctggatgacagagggagactcc End editing Edited EST: DW430443, type: ag Aligns to: chr7:104784689-104784907 (-+) All mismatches: ag (17), ag (18), ag (35), ag (54), ag (57), ag (58), ag (68), ag (77), ag (98), ag (99), ag (108), ag (112), ag (115), ag (120), ag (121), ag (131), ag (144), ag (164), ag (169), ag (174), ag (201), cg (219), Editing mismatches: 21, all mismatches: 22, alignment length: 220, cluster length: 185, total number of As: 51 Locations in RNA: 17 18 35 54 57 58 68 77 98 99 108 112 115 120 121 131 144 164 169 174 201 Locations in genome: 104784907 104784906 104784889 104784870 104784867 104784866 104784856 104784847 104784826 104784825 104784816 104784812 104784809 104784804 104784803 104784793 104784780 104784760 104784755 104784750 104784723 Upstream nucleotide (in genome): n a c t c a a g t a t c g t a a c g g c c Upstream nucleotide summary: a: 6, c: 6, g: 4, t: 4, other: 1 Downstream nucleotide (in genome): a g t c a a a g a t c g g a g t g g g c g Downstream nucleotide summary: a: 6, c: 3, g: 9, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 2, at: 2, ca: 1, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 4, gt: 0, ta: 2, tc: 2, tg: 0, tt: 0, other: 1 >chr7:104784689-104784907 (-) aagaccagcctggccaacatggtgaaatcctgtctctaccaaaaatgcaaaaactagctgagtgtgctggtggacgtctgtaatcccggctactcaggaggctaaggcagtagaatcacttgagcccaggaggtaacggttgcagtgagctgagatcacgccactgcactccagcctgggcgacagagtgagactccatc-tcaaaaaaaaaaaaaaaaa >DW430443:17-236 (+) gggaccagcctggccaacgtggtgaaatcctgtctctgccggaaatgcaaagactagctgggtgtgctggtggacgtctgtggtcccggctgctcggggggctggggcagtagagtcacttgagcccgggaggtaacggttgcagtgggctgggatcgcgccactgcactccagcctgggcgacggagtgagactccatcctgaaaaaaaaaaaaaaaaa End editing Edited EST: DW430911, type: ag Aligns to: chr7:30599928-30600162 (-+) All mismatches: ga (43), ag (47), ag (53), ag (76), ag (86), ag (89), ag (94), ag (99), ag (108), ag (152), ag (153), ag (156), ag (160), ag (169), ag (174), ag (212), ag (223), Editing mismatches: 16, all mismatches: 17, alignment length: 233, cluster length: 177, total number of As: 52 Locations in RNA: 47 53 76 86 89 94 99 108 152 153 156 160 169 174 212 223 Locations in genome: 30600152 30600146 30600123 30600113 30600110 30600105 30600100 30600091 30600047 30600046 30600043 30600039 30600030 30600025 30599987 30599976 Upstream nucleotide (in genome): c t a g c g c a a a t c t c a g Upstream nucleotide summary: a: 5, c: 5, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): c a g t c g g g a t a g g t g g Downstream nucleotide summary: a: 3, c: 2, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 3, at: 1, ca: 0, cc: 2, cg: 2, ct: 1, ga: 0, gc: 0, gg: 2, gt: 1, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chr7:30599928-30600162 (-) ggtggctcacacctgtaatcccagcactttgggaggtcaaggcaggtggatcacctgagctcaggagttcaagaccagcctgggcaacaatcccatctctaacaaaaacataaaaaattaaccaggtgtggtagcacatgcctgtggtctcagcaacttgggaggctgaggtggaaggatctcttgagcctgggaggcagaggttgcagtgagctgaggttgtgacactggactt >DW430911:39-271 (+) ggtga-tca-gcctgtgatcccagcactttgggaggtcagggcaggtgggtcgcctgggctcgggagttcaggaccagcctgggcaacaatcccatctctaacaaaaacataaaaggttgaccgggtgtggtggcacgtgcctgtggtctcagcaacttgggaggctgaggtggagggatctcttgggcctgggaggcagaggttgcagtgagctgaggttgtgacactggactt End editing Edited EST: DW431132, type: ag Aligns to: chr7:47470366-47470622 (-+) All mismatches: ag (15), ag (51), ag (73), ag (112), ag (119), ag (136), ag (142), ag (150), ag (179), ag (189), ag (221), ag (225), Editing mismatches: 12, all mismatches: 12, alignment length: 257, cluster length: 211, total number of As: 54 Locations in RNA: 15 51 73 112 119 136 142 150 179 189 221 225 Locations in genome: 47470621 47470585 47470563 47470524 47470517 47470500 47470494 47470486 47470457 47470447 47470415 47470411 Upstream nucleotide (in genome): g c c a c t t a t t a c Upstream nucleotide summary: a: 3, c: 4, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g c g c a a c t t c c g Downstream nucleotide summary: a: 2, c: 5, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 1, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 0, tt: 1, other: 0 >chr7:47470366-47470622 (-) gaggccaggcgcggtggctcatgcctgtgatcccagcactttgggaggccaaggcgggcagatcacctgaggtcaggagttcgagaccagcctggccaacatggcaaaactccgtctctactaaaaatacaaaaaaattagctgggtgtggtggcatgcacctgtattcccagctactcgggaggctgaggcacgagaatcgcttgaacccaggcggtggaggttgtagtgagctgagatcatgccactgcactcta >DW431132:14-270 (+) ggggccaggcgcggtggctcatgcctgtgatcccagcgctttgggaggccaaggcgggcggatcacctgaggtcaggagttcgagaccagcctggccagcatggcgaaactccgtctctactgaaaatgcaaaaaagttagctgggtgtggtggcatgcacctgtgttcccagctgctcgggaggctgaggcacgagaatcgcttgagcccgggcggtggaggttgtagtgagctgagatcatgccactgcactcta End editing Edited EST: DW431358, type: ag Aligns to: chr7:104784689-104784907 (-+) All mismatches: ag (17), ag (18), ag (35), ag (54), ag (57), ag (58), ag (68), ag (77), ag (98), ag (99), ag (108), ag (112), ag (115), ag (120), ag (121), ag (131), ag (144), ag (164), ag (169), ag (174), ag (201), cg (219), Editing mismatches: 21, all mismatches: 22, alignment length: 221, cluster length: 185, total number of As: 51 Locations in RNA: 17 18 35 54 57 58 68 77 98 99 108 112 115 120 121 131 144 164 169 174 201 Locations in genome: 104784907 104784906 104784889 104784870 104784867 104784866 104784856 104784847 104784826 104784825 104784816 104784812 104784809 104784804 104784803 104784793 104784780 104784760 104784755 104784750 104784723 Upstream nucleotide (in genome): n a c t c a a g t a t c g t a a c g g c c Upstream nucleotide summary: a: 6, c: 6, g: 4, t: 4, other: 1 Downstream nucleotide (in genome): a g t c a a a g a t c g g a g t g g g c g Downstream nucleotide summary: a: 6, c: 3, g: 9, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 2, at: 2, ca: 1, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 4, gt: 0, ta: 2, tc: 2, tg: 0, tt: 0, other: 1 >chr7:104784689-104784907 (-) aagaccagcctggccaacatggtgaaatcctgtctctaccaaaaatgcaaaaactagctgagtgtgctggtggacgtctgtaatcccggctactcaggaggctaaggcagtagaatcacttgagcccaggaggtaacggttgcagtgagctgagatcacgccactgcactccagcctgggcgacagagtgagactccatc-tcaaaaaaa-aaaaaaaaaa >DW431358:17-237 (+) gggaccagcctggccaacgtggtgaaatcctgtctctgccggaaatgcaaagactagctgggtgtgctggtggacgtctgtggtcccggctgctcggggggctggggcagtagagtcacttgagcccgggaggtaacggttgcagtgggctgggatcgcgccactgcactccagcctgggcgacggagtgagactccatcctgaaaaaaacaaaaaaaaaa End editing Edited EST: DW433812, type: ag Aligns to: chr7:30599938-30600162 (-+) All mismatches: ga (43), ag (47), ag (53), ag (76), ag (86), ag (89), ag (94), ag (99), ag (108), ag (152), ag (153), ag (156), ag (160), ag (169), ag (174), ag (212), ag (223), Editing mismatches: 16, all mismatches: 17, alignment length: 223, cluster length: 177, total number of As: 52 Locations in RNA: 47 53 76 86 89 94 99 108 152 153 156 160 169 174 212 223 Locations in genome: 30600152 30600146 30600123 30600113 30600110 30600105 30600100 30600091 30600047 30600046 30600043 30600039 30600030 30600025 30599987 30599976 Upstream nucleotide (in genome): c t a g c g c a a a t c t c a g Upstream nucleotide summary: a: 5, c: 5, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): c a g t c g g g a t a g g t g g Downstream nucleotide summary: a: 3, c: 2, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 3, at: 1, ca: 0, cc: 2, cg: 2, ct: 1, ga: 0, gc: 0, gg: 2, gt: 1, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chr7:30599938-30600162 (-) ggtggctcacacctgtaatcccagcactttgggaggtcaaggcaggtggatcacctgagctcaggagttcaagaccagcctgggcaacaatcccatctctaacaaaaacataaaaaattaaccaggtgtggtagcacatgcctgtggtctcagcaacttgggaggctgaggtggaaggatctcttgagcctgggaggcagaggttgcagtgagctgaggttgtga >DW433812:39-261 (+) ggtga-tca-gcctgtgatcccagcactttgggaggtcagggcaggtgggtcgcctgggctcgggagttcaggaccagcctgggcaacaatcccatctctaacaaaaacataaaaggttgaccgggtgtggtggcacgtgcctgtggtctcagcaacttgggaggctgaggtggagggatctcttgggcctgggaggcagaggttgcagtgagctgaggttgtga End editing Edited EST: DW433907, type: ag Aligns to: chr7:152102497-152102691 (-+) All mismatches: ag (105), ag (106), ag (111), ag (127), ag (136), ag (141), ag (175), ag (177), ag (184), ag (185), ag (190), ag (199), ag (205), Editing mismatches: 13, all mismatches: 13, alignment length: 195, cluster length: 101, total number of As: 32 Locations in RNA: 105 106 111 127 136 141 175 177 184 185 190 199 205 Locations in genome: 152102603 152102602 152102597 152102581 152102572 152102567 152102533 152102531 152102524 152102523 152102518 152102509 152102503 Upstream nucleotide (in genome): t a c c c c a c a a c t t Upstream nucleotide summary: a: 4, c: 6, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): a t g a g c c t a c t a c Downstream nucleotide summary: a: 4, c: 4, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 1, ca: 1, cc: 1, cg: 2, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr7:152102497-152102691 (-) tatattatttaaaagcttcttctaaaaggtacaaaggaaaaaatagaatgcaaagtgaactaggcagcgtgtagtggctcctgcctgtaatcccagcactttgggaggccaaggtgggcagatcacatgagaccaggagtttgagaccagtctggctaacatggcgaaaccccatctctactaaaaatacaaaaa >DW433907:17-211 (+) tatattatttaaaagcttcttctaaaaggtacaaaggaaaaaatagaatgcaaagtgaactaggcagcgtgtagtggctcctgcctgtggtcccggcactttgggaggccgaggtgggcggatcgcatgagaccaggagtttgagaccagtctggctagcgtggcgaggccccgtctctactgaaaatgcaaaaa End editing Edited EST: DW435248, type: ag Aligns to: chr7:73866411-73866653 (-+) All mismatches: ag (93), ag (109), gc (130), ag (155), ag (158), ag (163), ag (164), ag (183), ag (202), ag (215), ag (233), ag (241), ag (242), ag (247), ag (255), Editing mismatches: 14, all mismatches: 15, alignment length: 243, cluster length: 163, total number of As: 44 Locations in RNA: 93 109 155 158 163 164 183 202 215 233 241 242 247 255 Locations in genome: 73866574 73866558 73866512 73866509 73866504 73866503 73866484 73866465 73866452 73866434 73866426 73866425 73866420 73866412 Upstream nucleotide (in genome): c t c g c a c a t c t a c c Upstream nucleotide summary: a: 3, c: 7, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g a g g a g g a g t a t g g Downstream nucleotide summary: a: 4, c: 0, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 1, ca: 1, cc: 0, cg: 5, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chr7:73866411-73866653 (-) ggggagatttatttgagtaataactccagtcctactgcttggctagctctgcattaataagacgcttttggctgggctcagtggctcatgcctgtaatcccagcactttgggaggcgaaggtgggtggattgcttgaggtcaggagttcaagaccagcatggccaacacagcgaaacctggtcactaaaaatacaaaaattagccgggtgtggtggtgcatgcctgtaatcccagctactcag >DW435248:14-256 (+) ggggagatttatttgagtaataactccagtcctactgcttggctagctctgcattaataagacgcttttggctgggctcggtggctcatgcctgtgatcccagcactttgggaggccaaggtgggtggattgcttgaggtcgggggttcgggaccagcatggccaacacggcgaaacctggtcactaagaatacaaaaattggccgggtgtggtggtgcgtgcctgtggtcccggctactcgg End editing Edited EST: DW465250, type: ag Aligns to: chr7:44051289-44051632 (-+) All mismatches: ag (34), ag (40), ag (42), ag (43), ag (48), ag (64), ag (65), ag (78), ag (83), ag (96), ag (97), ag (102), ag (112), ag (120), ag (122), ag (142), ag (145), ag (155), ag (156), ag (196), ac (225), Editing mismatches: 20, all mismatches: 21, alignment length: 343, cluster length: 163, total number of As: 48 Locations in RNA: 34 40 42 43 48 64 65 78 83 96 97 102 112 120 122 142 145 155 156 196 Locations in genome: 44051615 44051609 44051607 44051606 44051601 44051585 44051584 44051571 44051566 44051553 44051552 44051547 44051537 44051529 44051527 44051507 44051504 44051494 44051493 44051453 Upstream nucleotide (in genome): t t t a c c a c g c a c a g a t a c a a Upstream nucleotide summary: a: 8, c: 6, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): t t a t g a g c g a g g c a c c a a g g Downstream nucleotide summary: a: 6, c: 4, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 4, at: 1, ca: 3, cc: 1, cg: 2, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 0, tt: 2, other: 0 >chr7:44051289-44051632 (-) gaccgggcatggtggctatgcctataatcccagcattttgggatgccaaggcgggtggatcacctgaggtcaggagttcaagaccagcctggccaacatggcgaaaccccgtctctaatacaaatacaaaaattacccaagcatggtggccactgtactccagcctgggcgacagagcaagactccgtctcaaaaaaaaaaaaaaaagaaaaaaagagaaagaaagtatcatgcttttctgcattctgtgaattgttttagtgagttatcgaacttgagggcatggtgggaacctccaaatttgcagccagttggtgagaagtacatgtggtctgaggacaccc >DW465250:17-359 (+) gaccgggcatggtggctgtgcctgtggtcccggcattttgggatgccggggcgggtggatcgcctggggtcaggagttcgggaccggcctggccagcatggcggagccccgtctctaatacaaatgcagaaattacccgggcatggtggccactgtactccagcctgggcgacagagcaggactccgtctc-aaaaaaaaaaaaaaagacaaaaagagaaagaaagtatcatgcttttctgcattctgtgaattgttttagtgagttatcgaacttgagggcatggtgggaacctccaaatttgcagccagttggtgagaagtacatgtggtctgaggacaccc End editing Edited EST: DW465405, type: ag Aligns to: chr7:74273957-74274299 (-+) All mismatches: ag (16), ag (78), ag (108), ag (116), ag (139), ag (181), ag (182), ag (186), ag (193), ag (194), ag (198), ag (222), ag (230), ag (234), ag (238), ag (260), ag (275), ag (294), ag (330), ag (350), Editing mismatches: 20, all mismatches: 20, alignment length: 343, cluster length: 335, total number of As: 98 Locations in RNA: 16 78 108 116 139 181 182 186 193 194 198 222 230 234 238 260 275 294 330 350 Locations in genome: 74274299 74274237 74274207 74274199 74274176 74274134 74274133 74274129 74274122 74274121 74274117 74274093 74274085 74274081 74274077 74274055 74274040 74274021 74273985 74273965 Upstream nucleotide (in genome): n a a c c a a a a a t t c t c t a c a a Upstream nucleotide summary: a: 10, c: 5, g: 0, t: 4, other: 1 Downstream nucleotide (in genome): a g g g a a a a a g g t g c g c t t c a Downstream nucleotide summary: a: 7, c: 3, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 5, ac: 1, ag: 3, at: 1, ca: 1, cc: 0, cg: 3, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 1, tt: 1, other: 1 >chr7:74273957-74274299 (-) aatgtcataaaattttcccccatttgcttttaagagttttatagtctgggcacggtggctcaagcttgtaattccagcactttgggaggccaaggtgggcagatcacttgagcccaggagttcaagaccaatgtgggcaacatggtgagatgccatctctacaaaaaacaaaaacaaaagttagctgggcatggtggcacacatctatagtctcagctactcaggaggctgaggtggaaggattacttgaacctgggaaattgaggctgcagtgagccatgatggtgccactgtattccagcctgggtgacagaacaatactttgtctcaaaaaaaaaaaaag >DW465405:16-358 (+) gatgtcataaaattttcccccatttgcttttaagagttttatagtctgggcacggtggctcaggcttgtaattccagcactttgggaggccagggtgggcggatcacttgagcccaggagttcgagaccaatgtgggcaacatggtgagatgccatctctacaaaggacagaaacaagggttggctgggcatggtggcacacatctgtagtctcggctgctcgggaggctgaggtggaaggattgcttgaacctgggaagttgaggctgcagtgagccgtgatggtgccactgtattccagcctgggtgacagagcaatactttgtctcaaaaagaaaaaaag End editing Edited EST: DW466921, type: ag Aligns to: chr7:44876135-44876472 (-+) All mismatches: ag (14), ag (29), ag (60), ag (78), ag (114), ag (145), ag (147), ag (167), ag (179), ag (194), ag (197), ag (211), ag (219), ag (229), ag (235), ag (239), ag (256), ag (264), ag (271), ag (307), ag (329), ag (330), ag (337), Editing mismatches: 23, all mismatches: 23, alignment length: 337, cluster length: 325, total number of As: 76 Locations in RNA: 14 29 60 78 114 145 147 167 179 194 197 211 219 229 235 239 256 264 271 307 329 330 337 Locations in genome: 44876471 44876455 44876424 44876406 44876370 44876339 44876337 44876317 44876305 44876290 44876287 44876273 44876265 44876255 44876249 44876245 44876228 44876220 44876213 44876177 44876155 44876154 44876147 Upstream nucleotide (in genome): c c g t c t c t c t a c c t c t c t a c c a c Upstream nucleotide summary: a: 3, c: 12, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): g c c g c c g g t c a t g g g c g g c c a c a Downstream nucleotide summary: a: 3, c: 9, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 0, ca: 2, cc: 3, cg: 5, ct: 2, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 3, tg: 4, tt: 0, other: 0 >chr7:44876135-44876472 (-) caggtgcctgccaccacacccagctaattttttgtatttttagtagagacagggtttcaccgtgttagccaggatggtctcgatctcctgacctcatgatccacccctctcggcctcccaaattgctgggattacaggtgtgagccaccgcgcctagccgaaaccccatctctactaaaaatacaaaacttactcaggcatggtggcaggcgcctgtagtcccagctactcgggaggctgaggcaggagaatagtttgaacccgggaggtggtggttgcagtgatctgagatcacaccgttgcactgcagcctgggcaacacagcaagactccatctc >DW466921:13-349 (+) cggg-gcctgccaccacgcccagctaattttttgtatttttagtagaggcagggtttcaccgtgttggccaggatggtctcgatctcctgacctcatgatccgcccctctcggcctcccaaattgctgggattgcgggtgtgagccaccgcgcctggccgaaaccccgtctctactaaaaatgcagaacttactcaggcgtggtggcgggcgcctgtggtcccggctgctcgggaggctgaggcgggagaatggtttgagcccgggaggtggtggttgcagtgatctgagatcacgccgttgcactgcagcctgggcggcacagcgagactccatctc End editing Edited EST: BU180574, type: ag Aligns to: chr7:73641384-73641869 (-+) All mismatches: ag (25), ag (34), ag (47), ag (48), ag (53), ag (83), ag (93), ag (104), ag (116), ag (117), ag (125), ag (132), ag (142), ag (145), ag (147), ag (149), ag (150), ag (151), ag (153), ag (156), ag (182), ag (183), ag (188), ag (192), ag (205), ag (209), ag (210), ag (221), ag (222), ag (226), ag (233), ag (235), ag (242), ag (251), ag (256), ag (261), ag (266), ag (283), ag (285), ag (291), ag (301), ag (302), ag (303), ag (310), ag (330), ag (350), ag (354), ag (360), ag (361), ag (370), ag (387), ag (406), ag (422), ag (426), ag (430), ag (431), ag (442), ag (473), ga (486), Editing mismatches: 58, all mismatches: 59, alignment length: 487, cluster length: 448, total number of As: 128 Locations in RNA: 25 34 47 48 53 83 93 104 116 117 125 132 142 145 147 149 150 151 153 156 182 183 188 192 205 209 210 221 222 226 233 235 242 251 256 261 266 283 285 291 301 302 303 310 330 350 354 360 361 370 387 406 422 426 430 431 442 473 Locations in genome: 73641845 73641836 73641823 73641822 73641817 73641787 73641777 73641766 73641754 73641753 73641745 73641738 73641728 73641725 73641723 73641721 73641720 73641719 73641717 73641714 73641688 73641687 73641682 73641678 73641665 73641661 73641660 73641649 73641648 73641644 73641637 73641635 73641628 73641619 73641614 73641609 73641604 73641587 73641585 73641579 73641569 73641568 73641567 73641560 73641540 73641520 73641516 73641510 73641509 73641500 73641483 73641464 73641448 73641444 73641440 73641439 73641429 73641398 Upstream nucleotide (in genome): c t t a c c c g c a g c a a t c a a a t t a c t g c a g a c c g c g c c c c g g c a a a a c c t a t c c c g c a c a Upstream nucleotide summary: a: 17, c: 24, g: 9, t: 8, other: 0 Downstream nucleotide (in genome): g g a t g c g c a c a t a t c a a a t g a t g c g a g a c g g g g g c c c g g c a a a a a g c a t c g g g g a g t a Downstream nucleotide summary: a: 18, c: 12, g: 21, t: 7, other: 0 Dinucleotide summary: aa: 8, ac: 2, ag: 2, at: 5, ca: 5, cc: 5, cg: 12, ct: 2, ga: 2, gc: 2, gg: 5, gt: 0, ta: 3, tc: 3, tg: 2, tt: 0, other: 0 >chr7:73641384-73641869 (-) ttgtacaaaaccttcccattagccaggcatggtagctcatgcctgtaatcccagcacttggggaggctgaggtgggccgatcactttaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggtgttgtggcgtgtgcctgtaatcccagctactcgggaggctgaggcaagagaaacctgaacccaggaggcagaggttgcagtgagccgagatcacgccactgcactccagcctgggtgacagagcgagactccctctcaaaaaacaaaataaaataaaataaatacaaattggccgggtgtggtggcagacacctgtaatcgcagctactcgggaggctgaggcaggagcatcgcttgaacccaggaggcggagtttgcagtgagccaagattgcacc-attgcacttcagcctgggcgacaggaacgaaaaaaaaaaaaaaaga >BU180574:1-487 (+) ttgtacaaaaccttcccattagccgggcatggtggctcatgcctgtggtcccggcacttggggaggctgaggtgggccgatcgctttaggtcgggagtttgaggccagcctggccggcatggtggaaccccgtctctactagaagtgcgggagttggccaggtgttgtggcgtgtgcctgtggtcccggctgctcgggaggctggggcgggagaaacctgggcccgggaggcgggggttgcggtgagccgggatcgcgccgctgcgctccagcctgggtgacggggcgaggctccctctcgggaaacaagataaaataaaataaatacagattggccgggtgtggtggcggacgcctgtggtcgcagctgctcgggaggctgaggcgggagcatcgcttgaacccgggaggcggagtttgcggtgggccgggattgcacccgttgcacttcagcctgggcgacaggaacgaagaanaaaaaaaaaaa End editing Edited EST: BF337877, type: ag Aligns to: chr7:55522344-55522993 (-+) All mismatches: ag (22), ag (78), ag (89), ag (252), ag (260), ag (275), ag (328), ag (358), ag (367), ag (370), ag (382), ag (389), ag (396), ag (425), ag (454), ag (462), ag (482), ag (483), ag (486), ag (503), ag (522), ag (527), ag (530), ag (539), ag (580), Editing mismatches: 25, all mismatches: 25, alignment length: 647, cluster length: 561, total number of As: 123 Locations in RNA: 22 78 89 252 260 275 328 358 367 370 382 389 396 425 454 462 482 483 486 503 522 527 530 539 580 Locations in genome: 55522972 55522916 55522905 55522742 55522734 55522719 55522666 55522636 55522627 55522624 55522612 55522605 55522598 55522569 55522540 55522532 55522512 55522511 55522508 55522490 55522471 55522466 55522462 55522453 55522412 Upstream nucleotide (in genome): t t t a a a t c c t t g g a c t t a t g t t g t c Upstream nucleotide summary: a: 5, c: 4, g: 4, t: 12, other: 0 Downstream nucleotide (in genome): g t g a t a t g a c g t g g g t a a g t g t g t t Downstream nucleotide summary: a: 5, c: 1, g: 10, t: 9, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 1, at: 1, ca: 1, cc: 0, cg: 2, ct: 1, ga: 0, gc: 0, gg: 2, gt: 2, ta: 1, tc: 1, tg: 5, tt: 5, other: 0 >chr7:55522344-55522993 (-) tttccttgagcagtggtttgtagttctccttgaagagatccttcacttcccttgtaagttgtattcctaggtattttattttctttgtagcaattgtgaatgggagttcactcatgatatggctctctgtttgtctgtattggtgtgtaggaatgcttgtgatttttgcgtgttgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagattgtgggctgagacaatggggttttctaaatatacaatcatgctgtctgcaaacagagacaatttgacttcctcttttcctaattgaatacgctttatttctttatttctttctcttgcctgattgccttggccagaacttccaatactgtgttgaataggagtgatgagagagggcatccttgtcttgtgctggttttcaagggaaatgcttccagcttttgcccattcagtatgatattggctgtgggtttgtcataaatagctcttattattttgagatatgttccatcaatacctagtttattgagagtttttatcatgaagggctattgaattttgtcgaagaccttttctgcatctattgagataatcatgtggtttttgtcattggttctctttatgtaatgtattatgtttattgattt >BF337877:1-647 (+) tttccttgagcagtggtttgtggttctccttgaagagatccttcacttcccttgtaagttgtattcctaggtattttgttttctttgtggcaattgtgaatgggagttcactcatgatatggctctctgtttgtctgtattggtgtgtaggaatgcttgtgatttttgcgtgttgattttgtatcctgagactttgctgaagttgcttatcagcttaaggagattgtgggctgagacaatggggttttctagatatacagtcatgctgtctgcagacagagacaatttgacttcctcttttcctaattgaatacgctttatttctttgtttctttctcttgcctgattgccttggccggaacttccgatgctgtgttgaatgggagtggtgagagggggcatccttgtcttgtgctggttttcaggggaaatgcttccagcttttgcccattcggtatgatgttggctgtgggtttgtcatggatggctcttattattt-gaggtatgttccatcaatacctggtttgt-gggagtttttgtcatgaagggctattgaattttgtcgaagaccttttctgcgtctattgagataatcatgtggtttt-gtcattggttctctttatgtaatgtattatgtttattgattt End editing Edited EST: AW900157, type: ag Aligns to: chr7:91362819-91363179 (-+) All mismatches: tc (35), ag (108), ag (134), ag (139), ag (147), ag (156), ag (182), ag (209), ag (271), ag (313), ag (322), ag (359), ag (364), ag (369), Editing mismatches: 13, all mismatches: 14, alignment length: 360, cluster length: 262, total number of As: 56 Locations in RNA: 108 134 139 147 156 182 209 271 313 322 359 364 369 Locations in genome: 91363085 91363059 91363054 91363046 91363037 91363011 91362984 91362922 91362880 91362871 91362834 91362829 91362824 Upstream nucleotide (in genome): t t a g t c t t c t t t a Upstream nucleotide summary: a: 2, c: 2, g: 1, t: 8, other: 0 Downstream nucleotide (in genome): g c t g g a a t t a t t g Downstream nucleotide summary: a: 3, c: 1, g: 4, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 1, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 2, tt: 3, other: 0 >chr7:91362819-91363179 (-) gcatccctgtcttgtgccagttttcaaagggaatgcttccagtttttgcccattcagtatgatattggctgtgggtttgtcataaaaagctcttagtattttgagatacatcccatcaatacctaatttattgagggcttttagcatgaagcgttgttgaattttgtcaatggccttttctgcatctattgagataatcgtgtggtttttgttgttggttctgttacatgctgggtgatgtttattgatttgcgtatattgaaccagccttgcatcccagggatgaagcccacttgatcatggtggataagctttttgatgtgttgctggattcggtttgccagtattttattgaagattt >AW900157:15-374 (+) gcatccctgtcttgtg-cagtcttcaaagggaatgcttccagtttttgcccattcagtatgatattggctgtgggtttgtcataaaaagctcttggtattttgagatacatcccatcaatgcctagtttattgggggcttttggcatgaagcgttgttgaattttgtcgatggccttttctgcatctattgagatgatcgtgtggtttttgttgttggttctgttacatgctgggtgatgtttattgatttgcgtatgttgaaccagccttgcatcccagggatgaagcccacttgatcgtggtggatgagctttttgatgtgttgctggattcggtttgccagtgttttgttgaggattt End editing Edited EST: AL707958, type: ag Aligns to: chr7:97586709-97587181 (-+) All mismatches: ag (43), ag (50), ag (53), ag (54), ag (59), ag (69), ag (77), ag (84), ag (97), ag (107), ag (119), ag (133), ag (196), ag (236), ag (238), ag (243), ag (244), ag (260), ag (312), ag (314), ag (336), ag (377), Editing mismatches: 22, all mismatches: 22, alignment length: 473, cluster length: 335, total number of As: 85 Locations in RNA: 43 50 53 54 59 69 77 84 97 107 119 133 196 236 238 243 244 260 312 314 336 377 Locations in genome: 97587139 97587132 97587129 97587128 97587123 97587113 97587105 97587098 97587085 97587075 97587063 97587049 97586986 97586946 97586944 97586939 97586938 97586922 97586870 97586868 97586846 97586805 Upstream nucleotide (in genome): a c a a t t t a t c t t t a c a a t a t t t Upstream nucleotide summary: a: 8, c: 3, g: 0, t: 11, other: 0 Downstream nucleotide (in genome): t g a g c t c t g t g c t c t a g t t t t t Downstream nucleotide summary: a: 2, c: 4, g: 5, t: 11, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 2, at: 3, ca: 0, cc: 0, cg: 1, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 3, tg: 2, tt: 6, other: 0 >chr7:97586709-97587181 (-) gaactgttcccgatatccgtgggagagaggatattactcccaatatcgcagaaagtgtacacccctctatgatgttactcctaatagccggggggtagaggatgacattattgaaaatagcgcagtgggtgtacatcccttcggtcatcttgttcctaatatcgtggggtgggagcggatggtatgactcccaatatcgcagggggcagagacctcccctgtgatactgtccctaacatccaaaggtggagaggatgatatttcttccaatttcgccgggggtgcacaacacccttgtgatattgatcctaatatccaggcggcgagaggatgatattagtctgaatattgcaggatgtgtacactccctagggatattgttcctaatatccagggacggagaggatgatatcactcccaatatagccgggggtgtacaccccttgtgtgacattgctcctaaagcgcagcgg >AL707958:1-473 (+) gaactgttcccgatatccgtgggagagaggatattactcccagtatcgcggagggtgtgcacccctctgtgatgttgctcctagtagccggggggtggaggatgacgttattgaaaatggcgcagtgggtgtgcatcccttcggtcatcttgttcctaatatcgtggggtgggagcggatggtatgactcccaatgtcgcagggggcagagacctcccctgtgatactgtccctagcgtccaggggtggagaggatgatgtttcttccaatttcgccgggggtgcacaacacccttgtgatattgatcctagtgtccaggcggcgagaggatgatgttagtctgaatattgcaggatgtgtacactccctagggatgttgttcctaatatccagggacggagaggatgatatcactcccaatatagccgggggtgtacaccccttgtgtgacattgctcctaaagcgcagcgg End editing Edited EST: DW409695, type: ag Aligns to: chr8:38234684-38235005 (-+) All mismatches: ag (16), ag (17), ag (26), ag (33), ag (72), ag (81), ag (82), ag (107), ag (114), ag (119), ag (168), ag (176), ag (177), ag (185), ag (203), ag (222), ag (245), ag (256), ag (268), ag (271), ag (273), ag (277), ac (282), ag (286), ag (294), ag (312), ag (313), ca (320), ag (322), Editing mismatches: 27, all mismatches: 29, alignment length: 322, cluster length: 307, total number of As: 83 Locations in RNA: 16 17 26 33 72 81 82 107 114 119 168 176 177 185 203 222 245 256 268 271 273 277 286 294 312 313 322 Locations in genome: 38235005 38235004 38234995 38234988 38234949 38234940 38234939 38234914 38234907 38234902 38234853 38234845 38234844 38234836 38234818 38234799 38234776 38234765 38234753 38234750 38234748 38234744 38234735 38234727 38234709 38234708 38234699 Upstream nucleotide (in genome): n a t a a t a t a c c t a c c c c a t t a t t c t a t Upstream nucleotide summary: a: 9, c: 7, g: 0, t: 10, other: 1 Downstream nucleotide (in genome): a t c g g a g g t g c a t c g g g c c a a c g t a t c Downstream nucleotide summary: a: 6, c: 7, g: 9, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 3, at: 4, ca: 0, cc: 2, cg: 4, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 4, tc: 4, tg: 2, tt: 0, other: 1 >chr8:38234684-38235005 (-) aatcgcagctactcggaaggctgagatgggagaactgcctgaaccccgagggggaaagccgcagtaagctgagattgcgccaccgcactctagcctgaatgacagagcgagattccgtctcaaaaacaaaacaaggccaggcatggtggctcacgtctgtaattcccgcactttgggaggctgaggcaggaggatcacttgaggtcaggagtttgagaccagtctggccagcatggtgaaactcccgtctctactaaaaatacaaaaattagccgggcatggtggtgcgtgcctgtaatcccggctactccggaggctgaga >DW409695:16-337 (+) ggtcgcagctgctcggagggctgagatgggagaactgcctgaaccccgagggggaaggccgcagtgggctgagattgcgccaccgcactctggcctgagtgacggagcgagattccgtctcaaaaacaaaacaaggccaggcatggtggctcgcgtctgtggttcccgcgctttgggaggctgaggcgggaggatcacttgaggtcgggagtttgagaccagtctggccggcatggtgaagctcccgtctctgctgagaatgcaaacattggccgggcgtggtggtgcgtgcctgtggtcccggatgctccggaggctgaga End editing Edited EST: DW414537, type: ag Aligns to: chr8:128170638-128170936 (-+) All mismatches: ag (34), ag (56), ag (72), ag (79), ag (91), ag (118), ag (144), ag (153), ag (162), ag (168), ag (169), ag (176), ag (179), ag (199), ag (217), ag (218), ag (240), ag (241), ag (253), Editing mismatches: 19, all mismatches: 19, alignment length: 299, cluster length: 220, total number of As: 45 Locations in RNA: 34 56 72 79 91 118 144 153 162 168 169 176 179 199 217 218 240 241 253 Locations in genome: 128170919 128170897 128170881 128170874 128170862 128170835 128170809 128170800 128170791 128170785 128170784 128170777 128170774 128170754 128170736 128170735 128170713 128170712 128170700 Upstream nucleotide (in genome): c t c a t c t t t c a t c c c a a a t Upstream nucleotide summary: a: 5, c: 7, g: 0, t: 7, other: 0 Downstream nucleotide (in genome): g c g g c c g t g a g c t a a t a g c Downstream nucleotide summary: a: 4, c: 5, g: 7, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 3, at: 1, ca: 3, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 4, tg: 2, tt: 1, other: 0 >chr8:128170638-128170936 (-) tgcccaggttggagtgcagtggtgcaattttggctcattacaacctattcctgccaggctcaagtcattctcttacctcagcctccagagtacctgggttcacaggtgtctgccatcacccctggctagtttttgtattttttgtagagacaaggttttaccattttggctaggctggtctcaaactcttgaattcaagcaatctgcctgccttggcctcccaaagtgttgggattacaggtgtgagccaccatgcctggattctccaccttttttgtctttgaccaccctgttcctct >DW414537:17-315 (+) tgcccaggttggagtgcggtggtgcaattttggctcattgcaacctattcctgccgggctcaggtcattctcttgcctcagcctccagagtacctgggttcgcaggtgtctgccatcacccctggctggtttttgtgttttttgtggagacggggttttgccgttttggctaggctggtctcgaactcttgaattcaagcggtctgcctgccttggcctcccagggtgttgggattgcaggtgtgagccaccatgcctggattctccaccttttttgtctttgaccaccctgttcctct End editing Edited EST: DW415525, type: ag Aligns to: chr8:22099394-22099643 (-+) All mismatches: ag (18), ag (31), ag (36), ag (41), ag (50), ag (55), ag (65), ag (67), ag (91), ag (92), ag (95), ag (98), ag (99), ag (100), ag (104), ag (130), ag (135), ag (139), ag (146), ag (152), ag (156), ag (162), ag (165), ag (171), ag (178), ag (191), ag (199), ag (229), ag (239), ag (241), tc (249), Editing mismatches: 30, all mismatches: 31, alignment length: 249, cluster length: 225, total number of As: 63 Locations in RNA: 18 31 36 41 50 55 65 67 91 92 95 98 99 100 104 130 135 139 146 152 156 162 165 171 178 191 199 229 239 241 Locations in genome: 22099642 22099629 22099624 22099619 22099610 22099605 22099595 22099593 22099569 22099568 22099565 22099562 22099561 22099560 22099556 22099529 22099524 22099520 22099513 22099507 22099503 22099497 22099494 22099488 22099481 22099468 22099460 22099430 22099420 22099418 Upstream nucleotide (in genome): g c g c a c a c a a t a a a t a c t g g c a c a g c c c g a Upstream nucleotide summary: a: 11, c: 10, g: 6, t: 3, other: 0 Downstream nucleotide (in genome): g c g g g g c t a g c a a a g t g c g g g t c c g g a a a c Downstream nucleotide summary: a: 7, c: 7, g: 13, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 3, ag: 2, at: 2, ca: 2, cc: 2, cg: 5, ct: 1, ga: 1, gc: 0, gg: 5, gt: 0, ta: 0, tc: 2, tg: 1, tt: 0, other: 0 >chr8:22099394-22099643 (-) gaggtgggtggatcacctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgtctctactaaaagtacaaaaattagccaggcctggtggcgggcatctgtaatcccagctactcgggaggttgaggcaggagaatcacttgaacctgggagaaggaggttgcagtgagccaagattgcgccattgcactccagcctgggcaacaagagcgaaactctgtgtcaaaaaaaaaaaaaaa >DW415525:17-265 (+) ggggtgggtggatcgcctggggtcgggagttcaggaccggcctggccagcgtggtgaaaccctgtctctactaagggtgcagggattggccaggcctg-tggcgggcatctgtagtcccggctgctcggggggttggggcgggagagtcgcttgagcctgggggaaggaggttgcggtgagccgagattgcgccattgcactccagcctgggcgacaagagcggagctctgtgccaaaaaaaaaaaaaaa End editing Edited EST: DW435212, type: ag Aligns to: chr8:8066508-8066748 (-+) All mismatches: ag (21), ag (49), ag (50), ag (58), ag (73), ag (81), ag (82), ag (124), ag (126), ag (129), ag (130), ag (131), ag (135), ag (161), ag (162), ag (171), ag (175), gc (179), ag (194), ac (216), ag (223), ag (227), ag (239), Editing mismatches: 21, all mismatches: 23, alignment length: 241, cluster length: 219, total number of As: 60 Locations in RNA: 21 49 50 58 73 81 82 124 126 129 130 131 135 161 162 171 175 194 223 227 239 Locations in genome: 8066743 8066715 8066714 8066706 8066691 8066683 8066682 8066640 8066638 8066635 8066634 8066633 8066629 8066603 8066602 8066593 8066589 8066570 8066541 8066537 8066525 Upstream nucleotide (in genome): c c a c c c a a t a a a t t a t c a c g c Upstream nucleotide summary: a: 8, c: 8, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): c a g g g a g t c a a a g a t c g t g g c Downstream nucleotide summary: a: 6, c: 4, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 2, at: 3, ca: 2, cc: 2, cg: 4, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr8:8066508-8066748 (-) ggcacacctgtaatgccagcattttgggaggccaagttgggcagatcacctgaggtcaggcgttcaagatcagcctggccaacatggtgaaatctcgtctctacaaaaatacaaaaattagccgggcatgatggcg-ggttcctgtaatcctggctactcaggaggctgaggcaggagaattgcttgaacctgggagatgaaggttgcagtgagacgagattgcaccactgcactccagcct >DW435212:16-256 (+) ggcacgcctgtaatgccagcattttgggaggccgggttgggcggatcacctgaggtcgggcgttcgggatcagcctggccaacatggtgaaatctcgtctctacaaaagtgcagggattggccgggcatgatggcgcggt-cctgtggtcctggctgctcgggacgctgaggcaggagagttgcttgaacctgggagatgacggttgcggtgggacgagattgcgccactgcactccagcct End editing Edited EST: BI333311, type: ag Aligns to: chr8:128195308-128196070 (-+) All mismatches: ag (39), ag (66), ag (67), ag (69), ag (185), ag (192), ag (214), ag (231), ag (232), ag (233), ag (252), ag (262), ag (309), ag (329), ag (330), ag (336), ag (343), ag (370), ag (371), ag (372), ag (388), ag (414), ag (415), ag (429), ag (431), ag (434), ag (442), ag (446), ag (450), ag (500), ag (508), ag (539), ag (584), ag (588), ag (589), ag (596), ag (597), ag (620), ag (622), ag (623), ag (627), ag (629), ag (661), ag (695), ag (698), ag (701), tc (723), ag (730), ag (738), ag (756), Editing mismatches: 49, all mismatches: 50, alignment length: 765, cluster length: 716, total number of As: 158 Locations in RNA: 39 66 67 69 185 192 214 231 232 233 252 262 309 329 330 336 343 370 371 372 388 414 415 429 431 434 442 446 450 500 508 539 584 588 589 596 597 620 622 623 627 629 661 695 698 701 730 738 756 Locations in genome: 128196032 128196005 128196004 128196002 128195886 128195879 128195857 128195840 128195839 128195838 128195819 128195809 128195762 128195742 128195741 128195735 128195728 128195701 128195700 128195699 128195683 128195657 128195656 128195642 128195640 128195637 128195629 128195625 128195621 128195571 128195563 128195532 128195487 128195483 128195482 128195475 128195474 128195451 128195449 128195448 128195444 128195442 128195411 128195378 128195375 128195372 128195343 128195334 128195317 Upstream nucleotide (in genome): a t a a t c t t a a t t a t a t t a a a t t a a c a t t t t a t c c a t a t t a t t t a t a c c t Upstream nucleotide summary: a: 19, c: 6, g: 0, t: 24, other: 0 Downstream nucleotide (in genome): c a a g a g t a a t t t t a a g g a a a t a t c g g g a g g g t t a g a t t a g t a t a g a g a g Downstream nucleotide summary: a: 19, c: 2, g: 15, t: 13, other: 0 Dinucleotide summary: aa: 8, ac: 2, ag: 5, at: 4, ca: 2, cc: 0, cg: 3, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 9, tc: 0, tg: 7, tt: 8, other: 0 >chr8:128195308-128196070 (-) gcttgaggaatcatcacactgtcttccacaatggttgaactaatttacactcccacaaacagtgtaaaagcgttcctatttctccacagcatcaccagcatctgttgtttcctgacttcttaataattgccattctaactggtgtgagatggtatctcatcatggttttgatttgcatttttctaatgaccagtgatgatgagtttttttcatatgtttgttggccaaataaatgtcttcttttgagaagtatctgttcatatcctttgcccatttattgatggggttgcttgatttttttcttgtaaatttgttttcagttccttgtaaattctagatattagacctttgtcagatgggtagactgcaaaaattttctcccattctataggttgcttgttcactatggtgataatttcttttgctgaacagaagctctttagttaattagatcccatttgtcaattttggcttttgttgccattgcttttgatgctttagtcatgaagtctctgcccatgcctgtgtcctgaatggtattgcctgggttttcttctagggtttttatggtttggggttttacattcaaggctttaatccatcttgagttaatttttgtataaggtataaggaaggggttcagttt-ctgtttactgcatatggc-tagccagttttcctagcaccatttattaaatagaaagtcctttccccattgcttgtttttgtcaggtttgtcaaaggtcagatggttgt-agatgtgtgg >BI333311:1-765 (+) gcttgaggaatcatcacactgtcttccacaatggttgagctaatttacactcccacaaacagtgtggaggcgttcctatttctccacagcatcaccagcatctgttgtttcctgacttcttaataattgccattctaactggtgtgagatggtatctcatcatggttttgatttgcatttttctgatgaccggtgatgatgagtttttttcatgtgtttgttggccaaatgggtgtcttcttttgagaagtgtctgttcatgtcctttgcccatttattgatggggttgcttgatttttttcttgtaagtttgttttcagttccttgtggattctggatattggacctttgtcagatgggtagactgcagggattttctcccattctgtaggttgcttgttcactatggtgatggtttcttttgctgagcggaggctctttggttgattggatcccatttgtcaattttggcttttgttgccattgcttttgatgctttggtcatgaggtctctgcccatgcctgtgtcctgaatggtgttgcctgggttttcttctagggtttttatggtttggggttttacgttcggggctttggtccatcttgagttaatttttgtgtggggtgtgaggaaggggttcagttttctgtttactgcatgtggcctagccagttttcctagcaccatttattagatggagagtcctttccccattgcttgtctttgtcgggtttgt-gaaggtcagatggttgtcggatgtgtgg End editing Edited EST: AA309093, type: ag Aligns to: chr8:11700170-11700428 (-+) All mismatches: ag (2), ag (33), ag (66), ag (71), ag (105), ag (108), ag (109), ag (119), ag (124), ag (178), ag (198), ag (211), ag (216), Editing mismatches: 13, all mismatches: 13, alignment length: 259, cluster length: 215, total number of As: 60 Locations in RNA: 2 33 66 71 105 108 109 119 124 178 198 211 216 Locations in genome: 11700427 11700396 11700363 11700358 11700324 11700321 11700320 11700310 11700305 11700251 11700231 11700218 11700213 Upstream nucleotide (in genome): c g g c t a a t a a c g g Upstream nucleotide summary: a: 4, c: 3, g: 4, t: 2, other: 0 Downstream nucleotide (in genome): a g g g a a t g g t g g g Downstream nucleotide summary: a: 3, c: 0, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 2, ca: 1, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 4, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr8:11700170-11700428 (-) caagcctgtaatcccagcactttgggaggctgaggcgggcagatcacctgaggtcaggagttttgagatcagccttggcaacacggtgaaaccccatctctactaaaaatacaaaattagccaagcatgctggcacatgcctgtaatcccagctactcgggaggctgaggtacgagaatcgcttgaacctgggaggcagaggatgcagtgagccgagatcacgccattgcactccagcctgggggacaagagtgaatct >AA309093:1-259 (+) cgagcctgtaatcccagcactttgggaggctggggcgggcagatcacctgaggtcaggagttttgggatcggccttggcaacacggtgaaaccccatctntactgaaggtacaaaattggccaggcatgctggcacatgcctgtaatcccagctactcgggaggctgaggtacgagagtcgcttgaacctgggaggcggaggatgcagtgggccgggntcacgccattgcactccagcctgggggacaagagtgaatct End editing Edited EST: AA569201, type: ag Aligns to: chr8:16542617-16542939 (-+) All mismatches: tg (23), ag (34), ag (35), ag (52), ag (68), ag (69), ag (85), ag (91), ag (121), ag (136), ag (146), ag (157), ag (160), ag (161), ag (164), ag (169), ag (172), ag (224), ag (231), ag (247), ag (250), gc (257), ag (263), ag (274), ag (282), Editing mismatches: 23, all mismatches: 25, alignment length: 322, cluster length: 250, total number of As: 65 Locations in RNA: 34 35 52 68 69 85 91 121 136 146 157 160 161 164 169 172 224 231 247 250 263 274 282 Locations in genome: 16542912 16542911 16542894 16542878 16542877 16542861 16542855 16542825 16542810 16542800 16542789 16542786 16542785 16542782 16542777 16542774 16542721 16542714 16542698 16542695 16542682 16542671 16542663 Upstream nucleotide (in genome): g a c t a g a g a a t t a a a a g g t g c g c Upstream nucleotide summary: a: 9, c: 3, g: 7, t: 4, other: 0 Downstream nucleotide (in genome): a a g a t g g g c c c a a t a a g g g g g t c Downstream nucleotide summary: a: 7, c: 4, g: 9, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 2, ag: 1, at: 2, ca: 0, cc: 1, cg: 2, ct: 0, ga: 1, gc: 0, gg: 5, gt: 1, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr8:16542617-16542939 (-) cacatgtgttcattgtttgtttgacagaaagggaaggccgggtgcagtggcttatgcctgtaatcccagcacactgggaggccaaggtgggtggatcacgaggtcaggagcttgagatcatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccaggcgtggtggcacgcgcctgtagtcccagctactcgcgaggctgaggcaggagaatgacgtgaacctaggaggtggaggttgcagtga-gccgagatcgcgccactgcactccagcctgggtgacagagcaagaagaccctgtctcaaaa >AA569201:7-328 (+) cacatgtgttcattgtgtgtttgacagggagggaaggccgggtgcggtggcttatgcctgtggtcccagcacactggggggccagggtgggtggatcacgaggtcaggagcttgggatcatcctggctagcacggtgaagccccgtctctgctggaagtacagaagattagccaggcgtggtggcac-cgcctgtagtcccagctactcgcgaggctggggcaggggaatgacgtgaacctggggggtggacgttgcggtgacgc-gaggtcgcgccgctgcactccagcctgggtgacagagcaagaagaccctgtctcaaaa End editing Edited EST: DA195254, type: ag Aligns to: chr9:14375119-14375685 (-+) All mismatches: ag (61), ag (77), ag (82), ag (87), ag (112), ag (113), ag (195), ag (202), ag (212), ag (256), ag (275), ag (287), Editing mismatches: 12, all mismatches: 12, alignment length: 568, cluster length: 227, total number of As: 42 Locations in RNA: 61 77 82 87 112 113 195 202 212 256 275 287 Locations in genome: 14375626 14375610 14375605 14375600 14375575 14375574 14375492 14375485 14375475 14375431 14375412 14375400 Upstream nucleotide (in genome): t a c c c a t g c c a t Upstream nucleotide summary: a: 3, c: 5, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g t g c a g g c c c g c Downstream nucleotide summary: a: 1, c: 5, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 1, ca: 1, cc: 3, cg: 1, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr9:14375119-14375685 (-) gttcccaggtttttc-ttttttttttttgagatggagtttttgctctttttgcccaggctagagtgcagtggtgcaatctcagctcactgcaacctccaccttccggtttcaagcgattcttctgcctcggcctcccaagtcgctgggattgcaggtgcccacctccacgcccagataatttgtttgtatttttagtagagacggggtttcaccatgttggtcaggctggtctcgaactgctgaccttgtgatccacccaccttggcctcccaaagtgctgggattacaggcatgagccactgcacctggccctgtccccaggtacttctggagaagctccttaaaaggaactaactaagctaggaggggttctcattttgccttcctcttttcctttttcatgattggagagaataaatgataactagagggatatcatggcctaagactggaagagcagagagatagaaagagcctagggctctgatgactctgaggaaccactatatgagccctgtgcatccagaggtagagtttctcttatgttgggaataagtcttggatgtt >DA195254:1-568 (+) gttcccaggtttttctttttttttttttgagatggagtttttgctctttttgcccaggctggagtgcagtggtgcagtctcggctcgctgcaacctccaccttccggtttcgggcgattcttctgcctcggcctcccaagtcgctgggattgcaggtgcccacctccacgcccagataatttgtttgtatttttggtagaggcggggtttcgccatgttggtcaggctggtctcgaactgctgaccttgtgatccgcccaccttggcctcccaaggtgctgggattgcaggcatgagccactgcacctggccctgtccccaggtacttctggagaagctccttaaaaggaactaactaagctaggaggggttctcattttgccttcctcttttcctttttcatgattggagagaataaatgataactagagggatatcatggcctaagactggaagagcagagagatagaaagagcctagggctctgatgactctgaggaaccactatatgagccctgtgcatccagaggtagagtttctcttatgttgggaataagtcttggatgtt End editing Edited EST: DA196974, type: ag Aligns to: chr9:99647920-99648484 (-+) All mismatches: ag (69), ag (80), ag (82), ag (99), ag (106), ag (110), ag (118), ag (137), ag (156), ag (176), ag (184), ag (185), ag (191), ag (199), ag (223), ag (240), ag (253), ag (279), ag (282), ag (313), ag (379), ag (393), Editing mismatches: 22, all mismatches: 22, alignment length: 564, cluster length: 325, total number of As: 100 Locations in RNA: 69 80 82 99 106 110 118 137 156 176 184 185 191 199 223 240 253 279 282 313 379 393 Locations in genome: 99648416 99648405 99648403 99648386 99648379 99648375 99648367 99648348 99648329 99648309 99648301 99648300 99648294 99648286 99648262 99648245 99648232 99648206 99648203 99648172 99648106 99648092 Upstream nucleotide (in genome): t t t g a a c a t a c a t c c g c a t t a a Upstream nucleotide summary: a: 8, c: 5, g: 2, t: 7, other: 0 Downstream nucleotide (in genome): g t a g g g c g g a a a g t g g c g a g g g Downstream nucleotide summary: a: 5, c: 2, g: 13, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 6, at: 0, ca: 1, cc: 2, cg: 1, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 0, tg: 4, tt: 1, other: 0 >chr9:99647920-99648484 (-) ttaaaaattgctttctactttcttccagctccagggtttcagattgaaaatgttgggccaggtgtgatagctgatgcctataatcccagcactttgggaggctgaagcaagaggatcacttgagcccaggagttcaagaccagcctgggcaacatagggagaccctgtccctacaaaaaatacaaaacttagttgggcatggtggcatgtgcctgtggtcccagctgcttgggaggctgaggctagaggatcacttgagcctgggaggttgaggctgaagtaagccatgattgcaccagtgccctccagactaggccacagagtgagactctgtctctgtctaagaaaagaaaggaagaaagaaagaaagaggaaggaaggaaggaaggggaaggaaggaaggaaggaaaaataagttatttaaattgaggctctgcaagtaatgtgttgtttctctctgatgctttcaagacttttttctttgtttttttttgtttccagaaacttaattattatgtgtcttggcatcaatgtctttgggcttaccatgtttgggaatcactca >DA196974:1-564 (+) ttaaaaattgctttctactttcttccagctccagggtttcagattgaaaatgttgggccaggtgtgatggctgatgcctgtgatcccagcactttggggggctgaggcaggaggatcgcttgagcccaggagttcaggaccagcctgggcaacatggggagaccctgtccctacagaaaatacggaacttggttgggcgtggtggcatgtgcctgtggtcccggctgcttgggaggctggggctagaggatcgcttgagcctgggaggttgaggctgaggtgagccatgattgcaccagtgccctccagactgggccacagagtgagactctgtctctgtctaagaaaagaaaggaagaaagaaagaaagaggaaggagggaaggaaggggagggaaggaaggaaggaaaaataagttatttaaattgaggctctgcaagtaatgtgttgtttctctctgatgctttcaagacttttttctttgtttttttt-gtttccagaaacttaattattatgtgtcttggcatcaatgtctttgggcttaccatgtttgggaatcactca End editing Edited EST: DB139843, type: ag Aligns to: chr9:99601084-99601614 (-+) All mismatches: ag (306), ag (324), ag (347), ag (363), ag (399), ag (413), ag (424), ag (450), ag (453), ag (479), ag (480), ag (485), ag (520), ag (521), Editing mismatches: 14, all mismatches: 14, alignment length: 531, cluster length: 216, total number of As: 57 Locations in RNA: 306 324 347 363 399 413 424 450 453 479 480 485 520 521 Locations in genome: 99601309 99601291 99601268 99601252 99601216 99601202 99601191 99601165 99601162 99601136 99601135 99601130 99601095 99601094 Upstream nucleotide (in genome): a c a g a c a a t t a c g a Upstream nucleotide summary: a: 7, c: 3, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): a g t g g a c t g a t g a c Downstream nucleotide summary: a: 4, c: 2, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 3, ca: 1, cc: 0, cg: 2, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr9:99601084-99601614 (-) aatgtatcagcctgaaacaccaattggtacagacaaaaaaaaaaaaaaaaaaaaagtcccaagtaaagcctgcttcctctagacaaaagaacaggaaagcaaccacccagaaagacagaaaattttagacaactgccctaccctag-ctaaacactatggaaaaaaactgcagctctcttccatcaccaaaaactgacttccaccctggttctagagtatcagagtactcctctagctctctaatggggtgatttcagatgaggcctagtggtaagccaggactcttcctaccaactgacagtaaaaagttgcctggataggccaggcgctgtggctcacgactgtaatcccagcactttgggaggccgaggtaggtggatcacgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcgtggtggtgggtgcctgtaattccagctacttgggaggctgaggcaggagaatcacttgaaccccggagac >DB139843:1-531 (+) aatgtatcagcctgaaacaccaattggtacagac-aaaaaaaaaaaaaaaaaaaagtcccaagtaaagcctgcttcctctagacaaaagaacaggaaagcaaccacccagaaagacagaaaattttagacaactgccctaccctagcctaaacactatggaaaaaaactgcagctctcttccatcaccaaaaactgacttccaccctggttctagagtatcagagtactcctctagctctctaatggggtgatttcagatgaggcctagtggtaagccaggactcttcctaccaactgacagtaaagagttgcctggataggccgggcgctgtggctcacgactgtagtcccagcactttggggggccgaggtaggtggatcacgaggtcaggagttcaggaccagcctggccgacatggtgaagccccatctctactaaaaatacaaaagttggccaggcgtggtggtgggtgcctgtggttccggctacttgggaggctgaggcaggagaatcacttgggccccggagac End editing Edited EST: DW408605, type: ag Aligns to: chr9:127921025-127921357 (-+) All mismatches: ag (14), ag (15), ag (16), ag (144), ag (150), ag (153), ag (188), ag (191), ta (202), ag (205), ag (207), ag (242), ag (244), ag (245), ag (246), ag (249), ag (251), ag (256), ag (260), ag (290), ag (295), ag (299), ag (303), ag (317), ag (322), ag (330), ag (331), Editing mismatches: 26, all mismatches: 27, alignment length: 331, cluster length: 320, total number of As: 114 Locations in RNA: 14 15 16 144 150 153 188 191 205 207 242 244 245 246 249 251 256 260 290 295 299 303 317 322 330 331 Locations in genome: 127921356 127921355 127921353 127921224 127921218 127921215 127921180 127921177 127921163 127921161 127921126 127921124 127921123 127921122 127921119 127921117 127921112 127921108 127921078 127921073 127921069 127921065 127921051 127921046 127921038 127921037 Upstream nucleotide (in genome): c a c c t a c a g g t c a a a t a c a c t c a a g a Upstream nucleotide summary: a: 11, c: 8, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): a c a c t t c g g c c a a a t c a g t g c g g t a c Downstream nucleotide summary: a: 7, c: 8, g: 6, t: 5, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 2, at: 4, ca: 3, cc: 2, cg: 3, ct: 0, ga: 1, gc: 1, gg: 1, gt: 0, ta: 0, tc: 3, tg: 0, tt: 1, other: 0 >chr9:127921025-127921357 (-) caacaagagtgaaactccatctaaaaaaaaaaaaaaaaaaaacttaaaaaatactggttagcagatgaccaaatcaactaatgtaggtaatagaggattgaaaaaatggtggttttgccaggtgtggtggctcacatctataatcccagcactttgggaggccaacgtgggtggatcacaaggtcaggagtttgagaccagcctgaccaacctggtgaaacccccgtctctacaaaaaatacaaaaatcagccgggtgtggtggcggcttgtacctgtaatcccagctactcaggagtctgaggcaagagaatcgcttgaacccgggaggcgg >DW408605:13-343 (+) cgg-gagagtgaaactccatct-aaaaaaaaaaaaaaaaaaacttaaaaaatactggttagcagatgaccaaatcaactaatgtaggtaatagaggattgaaaaaatggtggttttgccaggtgtggtggctcgcatctgtagtcccagcactttgggaggccaacgtgggtggatcgcagggtcaggagtatggggccagcctgaccaacctggtgaaacccccgtctctgcgggaagtgcaaagatcggccgggtgtggtggcggcttgtacctgtagtcccggctgctcgggagtctgaggcaggagagtcgcttgggcccgggaggcgg End editing Edited EST: DW409073, type: ag Aligns to: chr9:34021756-34022080 (-+) All mismatches: ag (16), ag (17), ag (45), ag (70), ag (97), ag (98), ag (110), ag (175), ag (227), ag (232), ta (267), ag (286), ag (288), ag (289), ag (295), ag (300), ag (316), ag (326), ag (332), Editing mismatches: 18, all mismatches: 19, alignment length: 325, cluster length: 317, total number of As: 74 Locations in RNA: 16 17 45 70 97 98 110 175 227 232 286 288 289 295 300 316 326 332 Locations in genome: 34022080 34022079 34022051 34022026 34021999 34021998 34021986 34021921 34021869 34021864 34021810 34021808 34021807 34021801 34021796 34021780 34021770 34021764 Upstream nucleotide (in genome): n a c c a a t c c g a a a a t c t c Upstream nucleotide summary: a: 7, c: 6, g: 1, t: 3, other: 1 Downstream nucleotide (in genome): a t g g a g c g c g a a t a g g g g Downstream nucleotide summary: a: 5, c: 2, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 1, at: 2, ca: 0, cc: 1, cg: 5, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 1 >chr9:34021756-34022080 (-) aatacaggtagggtttcaccacgttggccaggctggtcttgaactcctgtcatcaggtgatctgtctgccttggcttcccaaagtgttgggattacaggtgtgagccacggtgcctggcctgaaggtgattttaaaaataatccaatggggccgggcacagtggctcatgtctgtaattgcagcactttgggaggttgaggcggttggatcacccgaggtctggagttcgaaaccagcctgaccaacaagttgagaccccatctctactaaaaatacaaaaattagtcgggcgtggtggcaggcgtctgtagtcccagctgcttg >DW409073:16-340 (+) ggtacaggtagggtttcaccacgttggccgggctggtcttgaactcctgtcatcgggtgatctgtctgccttggcttcccagggtgttgggattgcaggtgtgagccacggtgcctggcctgaaggtgattttaaaaataatccaatggggccgggcacggtggctcatgtctgtaattgcagcactttgggaggttgaggcggttggatcgcccggggtctggagttcgaaaccagcctgaccaacaagtagagaccccatctctactagaggtacaagaattggtcgggcgtggtggcgggcgtctgtggtcccggctgcttg End editing Edited EST: DW421837, type: ag Aligns to: chr9:5495470-5495707 (-+) All mismatches: ag (26), ag (30), ag (36), ag (37), ag (52), ag (54), ag (60), ag (65), ag (66), ag (71), ag (72), ag (74), ag (81), ag (83), ag (102), ag (104), ag (107), ag (110), ag (112), ag (123), ag (130), ag (131), ag (134), ag (135), ag (138), ag (158), ag (172), ag (210), ag (212), ag (216), ag (218), ag (219), ag (223), ag (225), ag (244), ga (248), Editing mismatches: 35, all mismatches: 36, alignment length: 238, cluster length: 219, total number of As: 92 Locations in RNA: 26 30 36 37 52 54 60 65 66 71 72 74 81 83 102 104 107 110 112 123 130 131 134 135 138 158 172 210 212 216 218 219 223 225 244 Locations in genome: 5495699 5495695 5495689 5495688 5495673 5495671 5495665 5495660 5495659 5495654 5495653 5495651 5495644 5495642 5495623 5495621 5495618 5495615 5495613 5495602 5495595 5495594 5495591 5495590 5495587 5495567 5495553 5495515 5495513 5495509 5495507 5495506 5495502 5495500 5495481 Upstream nucleotide (in genome): t c c a a a a c a c a c c a a t a t a c a a a a t a g a t c g a t c t Upstream nucleotide summary: a: 17, c: 9, g: 2, t: 7, other: 0 Downstream nucleotide (in genome): g t a g a c a a t a c g a a t a c a g c a g a c c g g t t g a t c a c Downstream nucleotide summary: a: 13, c: 8, g: 8, t: 6, other: 0 Dinucleotide summary: aa: 5, ac: 4, ag: 4, at: 4, ca: 5, cc: 1, cg: 2, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 3, tg: 1, tt: 1, other: 0 >chr9:5495470-5495707 (-) caggacataggcatgggcaaggacttcatgtctaaaacaccaaacgcaatggcaacagaagccaaaattgacaaatgggatctaataaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaagctacagaatgggagaacatttttgcaatctacccatctgacaaatggctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaa >DW421837:18-255 (+) caggacatgggcgtgggcggggacttcatgtctagagcaccagacgcggtggcggcggaagccgagattgacaaatgggatctagtgaagctgaggagcttctgcgcagcaagggaggctgccatcagagtgaacaggcaggctacagaatgggggaacatttttgcaatctacccatctgacaaatggctagtgtccggggtctgcgatgaactcaaacaaatttgcaaaaaaaaaa End editing Edited EST: DW465391, type: ag Aligns to: chr9:35693862-35694207 (-+) All mismatches: ag (14), cg (16), ag (36), ag (57), ag (80), ag (103), ag (112), ag (125), ag (137), ag (146), ag (150), ag (164), ag (165), ag (177), ag (179), ag (195), ag (301), ag (305), ag (307), ag (323), ag (324), ag (332), ag (350), Editing mismatches: 22, all mismatches: 23, alignment length: 346, cluster length: 337, total number of As: 84 Locations in RNA: 14 36 57 80 103 112 125 137 146 150 164 165 177 179 195 301 305 307 323 324 332 350 Locations in genome: 35694206 35694184 35694163 35694140 35694117 35694108 35694095 35694083 35694074 35694070 35694056 35694055 35694043 35694041 35694025 35693919 35693915 35693913 35693897 35693896 35693888 35693870 Upstream nucleotide (in genome): c t c t c c a c c c a a t c c c c c t a c c Upstream nucleotide summary: a: 4, c: 14, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g c c g t g c g c c a g c g c g c g a t c g Downstream nucleotide summary: a: 2, c: 9, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 1, ca: 0, cc: 6, cg: 7, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr9:35693862-35694207 (-) cagcctcccgagtggctgggattacaggcgtgtgccaccaccacacctgactaatttttgtagttttagtagagacgggagggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtgatccacccaccttggcgtcacaaagtgctgggattacaggcgtgagccaccacacttggccaaaacaacggattttagtttaacagtacaaaaaggtcactgatatggtttcacattctacattgcaactgccccttaagaaactgccaattatcggccaggcacagtggctcaggcctgtaattccagcactttgggaggctgaggcaggagggta >DW465391:13-358 (+) cgggctcccgagtggctgggattgcaggcgtgtgccaccaccacgcctgactaatttttgtagttttggtagagacgggagggtttcaccgtgttggccgggctggtctcgagctcctgacctcgggtgatccgcccgccttggcgtcacagggtgctgggattgcgggcgtgagccaccacgcttggccaaaacaacggattttagtttaacagtacaaaaaggtcactgatatggtttcacattctacattgcaactgccccttaagaaactgccaattatcggccgggcgcggtggctcaggcctgtggttccagcgctttgggaggctgaggcgggagggta End editing Edited EST: DB571041, type: ag Aligns to: chr9:115743686-115744157 (-+) All mismatches: ag (27), ag (28), ag (61), ag (65), ag (69), ag (119), ag (169), ag (206), ag (222), ag (232), ag (239), ag (242), ag (274), ag (283), ag (319), ag (320), ag (341), ag (351), ag (386), ag (398), ag (424), ag (443), ag (446), ag (454), Editing mismatches: 24, all mismatches: 24, alignment length: 472, cluster length: 428, total number of As: 83 Locations in RNA: 27 28 61 65 69 119 169 206 222 232 239 242 274 283 319 320 341 351 386 398 424 443 446 454 Locations in genome: 115744131 115744130 115744097 115744093 115744089 115744039 115743989 115743952 115743936 115743926 115743919 115743916 115743884 115743875 115743839 115743838 115743817 115743807 115743772 115743760 115743734 115743715 115743712 115743704 Upstream nucleotide (in genome): t a t t t t c t a t g a t g a a t c t c a t t t Upstream nucleotide summary: a: 6, c: 3, g: 2, t: 13, other: 0 Downstream nucleotide (in genome): a g c g t g g t c t g c g g a g t g t t g c c a Downstream nucleotide summary: a: 3, c: 5, g: 10, t: 6, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 3, at: 0, ca: 0, cc: 0, cg: 2, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 3, tg: 3, tt: 5, other: 0 >chr9:115743686-115744157 (-) tttttaattttttaaaattatactttaagttctggcatacatgtgcagaacatgcaggttacataggtatacatgtgccatggtggtttgctgcacccatcaacctgtcatctacattaggtatttctcctaatgctatcccctccccttgtccccccaccccccgacaggccctgttgtgtgatgttcccctccctgtgcccatatgttctcattgttcaactcccacttatgagtgagaacatacggtgtttggtcttctgttcctgtgttagtttgctgagaatgatggtttccagctccatccatgtccctgcaaaggacatgaactttcttttttatggctgcacagtgttccgtggtgtatatgtgccacattttctttatccagtctgtcattgatgggcatttgggttggttccaagtctttgctattgtgaatactactgcaataaacgtatgtgtgaatatg >DB571041:1-472 (+) tttttaattttttaaaattatactttgggttctggcatacatgtgcagaacatgcaggttgcatgggtgtacatgtgccatggtggtttgctgcacccatcaacctgtcatctacattgggtatttctcctaatgctatcccctccccttgtccccccaccccccgacgggccctgttgtgtgatgttcccctccctgtgcccatgtgttctcattgttcagctcccacttgtgagtgggagcatacggtgtttggtcttctgttcctgtgttggtttgctgggaatgatggtttccagctccatccatgtccctgcaggggacatgaactttcttttttgtggctgcacggtgttccgtggtgtatatgtgccacattttctttgtccagtctgtcgttgatgggcatttgggttggttccaggtctttgctattgtgaatgctgctgcaatgaacgtatgtgtgaatatg End editing Edited EST: BX482179, type: ag Aligns to: chr9:111897883-111898327 (-+) All mismatches: ag (59), ag (76), ag (83), ag (93), ag (97), ag (114), ag (122), ag (128), ag (370), ag (372), ag (378), ag (379), ag (384), ag (395), ag (400), ag (401), ag (405), ag (414), ag (447), ag (448), ag (450), ag (455), ag (456), ag (457), ag (458), ag (473), ag (474), ag (475), ag (478), ag (484), ag (487), Editing mismatches: 31, all mismatches: 31, alignment length: 446, cluster length: 428, total number of As: 131 Locations in RNA: 59 76 83 93 97 114 122 128 370 372 378 379 384 395 400 401 405 414 447 448 450 455 456 457 458 473 474 475 478 484 487 Locations in genome: 111898322 111898305 111898298 111898288 111898284 111898267 111898259 111898253 111898012 111898010 111898004 111898003 111897998 111897987 111897982 111897981 111897977 111897968 111897935 111897934 111897932 111897927 111897926 111897925 111897924 111897909 111897908 111897907 111897904 111897898 111897895 Upstream nucleotide (in genome): t a g g c c t t c c t a c g c a c c c a c c a a a a a a t a t Upstream nucleotide summary: a: 11, c: 11, g: 3, t: 6, other: 0 Downstream nucleotide (in genome): g c c t c g g c c c a t g g a g g c a c t a a a c a a a c t g Downstream nucleotide summary: a: 9, c: 10, g: 8, t: 4, other: 0 Dinucleotide summary: aa: 5, ac: 3, ag: 1, at: 2, ca: 3, cc: 4, cg: 3, ct: 1, ga: 0, gc: 1, gg: 1, gt: 1, ta: 1, tc: 2, tg: 3, tt: 0, other: 0 >chr9:111897883-111898327 (-) attttagtcaggctggtctcgaactcctgacctcaggtgatccacctgctttggcctcccagagtgctaggattacaggtgtgagccaccgtgcctggcctaaaaatgtgttatatcagacaaaacatcttagtaaaaatttagggcattttaataataagccaacagtttttgagactgtagagattttgagtagaatttttttt-atgaggtggctttttaaaaaataattgaaaatgggaaaatgacccataaagtgaattcacctagaatatccatttaaatgttcagacttgtggctgagcgcggtggctcacacctgtaatcccagcactttgggaggccaaggcaggcggatcacctgaggtcaggagttcgagaccagtctggccaacatggcaaaaccttgtctccactaaaaatacaaaaattagccgggtgtggt >BX482179:54-499 (+) attttggtcaggctggtctcgagctcctggcctcaggtggtccgcctgctttggcctcccggagtgctgggattgcaggtgtgagccaccgtgcctggcctaaaaatgtgttatatcagacaaaacatcttagtaaaaatttagggcattttaataataagccaacagtttttgagactgtagagattttgagtagaatttttttttatgaggtggctttttaaaaaataattgaaaatgggaaaatgacccataaagtgaattcacctagaatatccatttaaatgttcagacttgtggctgagcgcggtggctcgcgcctgtggtcccggcactttggggggccggggcgggcggatcgcctgaggtcaggagttcgagaccagtctggccggcgtggcggggccttgtctccactagggatgcaaaagttggccgggtgtggt End editing Edited EST: AW238965, type: ga Aligns to: chr9:128003283-128003585 (-+) All mismatches: ga (183), ga (223), ga (230), ga (235), ga (237), ga (243), ga (249), ga (252), ga (255), gc (259), ga (261), ga (262), ga (263), ga (267), ga (271), ga (274), ga (275), ga (280), ga (285), ga (286), ga (287), ga (288), ga (302), Editing mismatches: 22, all mismatches: 23, alignment length: 302, cluster length: 121, total number of Gs: 49 Locations in RNA: 183 223 230 235 237 243 249 252 255 261 262 263 267 271 274 275 280 285 286 287 288 302 Locations in genome: 128003403 128003363 128003356 128003351 128003349 128003343 128003337 128003334 128003331 128003325 128003324 128003323 128003319 128003315 128003312 128003311 128003306 128003301 128003300 128003299 128003298 128003283 Upstream nucleotide (in genome): t c c c a a a a a t g g c g c g c t g g g g Upstream nucleotide summary: a: 5, c: 6, g: 8, t: 3, other: 0 Downstream nucleotide (in genome): a c g a g g a g g g g c g t g c a g g g a n Downstream nucleotide summary: a: 5, c: 3, g: 12, t: 1, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 4, at: 0, ca: 2, cc: 1, cg: 3, ct: 0, ga: 1, gc: 2, gg: 3, gt: 1, ta: 1, tc: 0, tg: 2, tt: 0, other: 1 >chr9:128003283-128003585 (-) ggggtgtttcgcgagtgtgagagggaagcgccgcggcctgtatttctagacctgcccttcgcctggttcgtggcgccttgtgaccccgggcccctgccgcctgcaagtcggaaattgcgctgtgctcctgtgctacggcctgtggctggactgcctgctgctgcccaactggctggcaagatgaagctctccctggtggccgcgatgctgctgctgctcagcgcggcgcgggccgaggaggaggacaagaaggaggacgtgggcacggtggtcggcatcgacctggggaccacctactcctgg >AW238965:1-302 (+) ggggtgtttcgcgagtgtgagagggaagcgccgcggcctgtatttctagacctgcccttcgcctggttcgtggcgccttgtgaccccgggcccctgccgcctgcaagtcggaaattgcgctgtgctcctgtgctacggcctgtggctggactgcctgctgctgcccaactggctggcaagataaanctctccctggtggccgcgatgctgctgctgctcancacggcgcaggccaaagaggaagacaaaaaagaagacctaaacacagtgatcaacatcaacctaaaa-ccacctactcctga End editing Edited EST: DA153518, type: ag Aligns to: chrX:50356245-50356812 (-+) All mismatches: ag (450), ag (466), ag (467), ag (486), ag (503), ag (504), ag (526), ag (535), ag (543), ag (553), ag (559), ag (561), Editing mismatches: 12, all mismatches: 12, alignment length: 568, cluster length: 112, total number of As: 33 Locations in RNA: 450 466 467 486 503 504 526 535 543 553 559 561 Locations in genome: 50356363 50356347 50356346 50356327 50356310 50356309 50356287 50356278 50356270 50356260 50356254 50356252 Upstream nucleotide (in genome): a t a c c a t t t c t t Upstream nucleotide summary: a: 3, c: 3, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): g a g g a a c g t t t g Downstream nucleotide summary: a: 3, c: 1, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 0, ca: 1, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 2, other: 0 >chrX:50356245-50356812 (-) ccatatgaaatttacaataatgttccaaaatgcagtctgttgacacttttattgagtttctattaagtttatagattcacttggagttgacatcttaacaatgttgagtcatcgttgctaggaaattgtgagtcctttcatttatgtgcatctagttttatgtttctcaatagagttttaaagtttttgcgtatagatcctgcatatatcttgttaggtttatttctaggcatcttacctttataattgctgcagtaaatgtgatctttccctccattatatattctaactaattgttgcatctatgtagaaaagatgatttccatatatgaattttataccctgacaccttactgaattttcctgttgttggtattatttttaaattgtttatgatgaggctgcgcacagtggcacatgcctgtaatcttagcactttgcgaggccgaagtgggtggattgcttaaggccaggagtttgagaccagcctgggcaacatggcaaaaccctgtctctactaaaaatacaaaaattagccgggtatggtggtgcatgcctatagtcctag >DA153518:1-568 (+) ccatatgaaatttacaataatgttccaaaatgcagtctgttgacacttttattgagtttctattaagtttatagattcacttggagttgacatcttaacaatgttgagtcatcgttgctaggaaattgtgagtcctttcatttatgtgcatctagttttatgtttctcaatagagttttaaagtttttgcgtatagatcctgcatatatcttgttaggtttatttctaggcatcttacctttataattgctgcagtaaatgtgatctttccctccattatatattctaactaattgttgcatctatgtagaaaagatgatttccatatatgaattttataccctgacaccttactgaattttcctgttgttggtattatttttaaattgtttatgatgaggctgcgcacagtggcacatgcctgtaatcttagcactttgcgaggccgaggtgggtggattgcttggggccaggagtttgagaccggcctgggcaacatggcggaaccctgtctctactaaaaatgcaaaaattggccgggtgtggtggtgcgtgcctgtggtcctag End editing Edited EST: DA350424, type: ag Aligns to: chrX:48943989-48944475 (-+) All mismatches: ag (45), ag (64), ag (65), ag (81), ag (87), ag (101), ag (130), ag (140), ag (146), ag (158), ag (235), ag (292), ag (293), ag (296), ag (306), ag (312), ag (333), ag (346), ag (349), ag (350), ag (351), ag (366), Editing mismatches: 22, all mismatches: 22, alignment length: 488, cluster length: 322, total number of As: 66 Locations in RNA: 45 64 65 81 87 101 130 140 146 158 235 292 293 296 306 312 333 346 349 350 351 366 Locations in genome: 48944431 48944412 48944411 48944395 48944389 48944375 48944346 48944336 48944330 48944318 48944241 48944184 48944183 48944180 48944170 48944164 48944143 48944130 48944127 48944126 48944125 48944110 Upstream nucleotide (in genome): a c a a c a t t c t c c a t t c a t t a a c Upstream nucleotide summary: a: 8, c: 7, g: 0, t: 7, other: 0 Downstream nucleotide (in genome): g a t c c g g c t c g a g g c t t g a a g t Downstream nucleotide summary: a: 4, c: 5, g: 8, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 4, at: 2, ca: 2, cc: 1, cg: 1, ct: 3, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 3, tg: 3, tt: 0, other: 0 >chrX:48943989-48944475 (-) ttttatttatttatttatttgatatggtcttgctctgttgtccaagctggaccaaagtggcacaatctcgactcactgcaacctccacctcccgggttcaagtgattctcctgcctcagcctcccgagtagctgggattacaggcatgtgccaccatacccagctaattttttttcttttttgagacgcagttttgctcttgttgcccaggctggagtgcagtggcgcgatatcagctcactgcaaacctctgcctcccgggttgaagagattctcgtgcctcagcctcccaagtagctgggattacaggcatgcaccaccatgcccggctaattttgtatttttagtaaaggcgggctttcaccatgtcgtccaggctggtcttgaactcctgaccttaggtgatctgcctgccttggcctcctaaagtgctgggattacaggtgtaggccaccatgcccagccttcttt-atctttaaaaaaaaaa >DA350424:1-488 (+) ttttatttatttatttatttgatatggtcttgctctgttgtccaggctggaccaaagtggcacggtctcgactcactgcagcctccgcctcccgggttcaggtgattctcctgcctcagcctcccgagtggctgggattgcaggcgtgtgccaccatgcccagctaattttttttcttttttgagacgcagttttgctcttgttgcccaggctggagtgcagtggcgcgatatcggctcactgcaaacctctgcctcccgggttgaagagattctcgtgcctcagcctcccgggtggctgggattgcaggcgtgcaccaccatgcccggctagttttgtatttttggtgggggcgggctttcaccgtgtcgtccaggctggtcttgaactcctgaccttaggtgatctgcctgccttggcctcctaaagtgctgggattacaggtgtaggccaccatgcccagccttcttttatctttaaaaaaaaaa End editing Edited EST: DW430104, type: ag Aligns to: chrX:10611580-10611841 (-+) All mismatches: ag (16), ag (35), ag (36), ag (45), ag (48), ag (91), ag (93), tc (95), ag (128), ag (130), ag (133), ag (136), ag (143), ag (157), ag (159), ag (168), ag (169), ag (198), ag (204), ag (238), Editing mismatches: 19, all mismatches: 20, alignment length: 263, cluster length: 223, total number of As: 57 Locations in RNA: 16 35 36 45 48 91 93 128 130 133 136 143 157 159 168 169 198 204 238 Locations in genome: 10611841 10611822 10611821 10611812 10611809 10611766 10611764 10611729 10611727 10611724 10611721 10611714 10611700 10611698 10611689 10611688 10611659 10611653 10611619 Upstream nucleotide (in genome): n t a t c a t t t c c t t t t a t t a Upstream nucleotide summary: a: 4, c: 3, g: 0, t: 11, other: 1 Downstream nucleotide (in genome): t a t t t t g t g g t t t t a t g g t Downstream nucleotide summary: a: 2, c: 0, g: 5, t: 12, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 4, ca: 0, cc: 0, cg: 1, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 4, tt: 5, other: 1 >chrX:10611580-10611841 (-) atatgtgccacattttcttaatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaatagtgccacaataaacatacatgtgcatgtgtctttatagcagcatgatttatagtcctttgggtatatacccagtaatgggatggctgggtcaaatggtatttctagttctagatccctgaggaatcgctacactgacttccacaatggttgaactagttgacagtcccaccaaccgttcct-att >DW430104:16-278 (+) gtatgtgccacattttcttggtccagtctgtcgttgttggacatttgggttggttccaagtctttgctattgtgagtggcgccacaataaacatacatgtgcatgtgtctttgtggcggcgtgatttgtagtcctttgggtgtgtacccagtggtgggatggctgggtcaaatggtatttctggttctggatccctgaggaatcgctacactgacttccacagtggttgaactagttgacagtcccaccaaccgttccttatt End editing Edited EST: DW451868, type: ag Aligns to: chrX:153275427-153275785 (-+) All mismatches: ag (15), ag (16), ag (88), ag (102), ag (114), ag (118), ag (119), ag (127), ag (137), ag (142), ag (153), ag (166), ag (168), ag (192), ag (193), ag (199), ag (200), ag (205), ag (209), ag (213), ga (230), ag (232), ag (246), ag (273), ag (278), ag (310), ag (332), ag (333), ag (353), Editing mismatches: 28, all mismatches: 29, alignment length: 360, cluster length: 338, total number of As: 87 Locations in RNA: 15 16 88 102 114 118 119 127 137 142 153 166 168 192 193 199 200 205 209 213 232 246 273 278 310 332 333 353 Locations in genome: 153275785 153275784 153275712 153275698 153275686 153275682 153275681 153275673 153275663 153275658 153275647 153275634 153275632 153275608 153275607 153275601 153275600 153275595 153275591 153275587 153275569 153275555 153275528 153275523 153275491 153275469 153275468 153275448 Upstream nucleotide (in genome): n a c c a t a c g c g a c a a a a t c c t c g c c c a c Upstream nucleotide summary: a: 9, c: 12, g: 3, t: 3, other: 1 Downstream nucleotide (in genome): a a c g g a g g g g c c t a g a a g g t g g g g c a c a Downstream nucleotide summary: a: 8, c: 5, g: 13, t: 2, other: 0 Dinucleotide summary: aa: 4, ac: 2, ag: 3, at: 0, ca: 2, cc: 2, cg: 6, ct: 2, ga: 0, gc: 1, gg: 2, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 1 >chrX:153275427-153275785 (-) aaatggtatctttgattttctagttcatcatgatattatacagaaatgcaattgatgctgggcacggtggctcacgcctgtgattccagcgctttgggaagctaaggcgggcagatcacttgaggccaggagtttgagaccagcctgggcaacatggcgaaaccccgtctctacaaaaagtacaaaaattagccaggcatggtggtgcatgcct-gtagtttgagctactcaggaggctgacccaggaggatagtttgagcccaggacgttgaggctgcagtgagccatgattccaccactgcactccagcccgggcaacagagggagaccttgcctcaaaaaaaaaaaaaaaaaaaaaa >DW451868:15-374 (+) ggatggtatctttgattttctagttcatcatgatattatacagaaatgcaattgatgctgggcacggtggctcgcgcctgtgattccggcgctttgggaggctggggcgggcggatcacttggggccgggagtttgaggccagcctgggcagcgtggcgaaaccccgtctctacaaagggtacaggaattggccgggcgtggtggtgcatgcctgatggtttgagctactcgggaggctgacccaggaggatagtttgggcccgggacgttgaggctgcagtgagccatgattccgccactgcactccagcccgggcggcagagggagaccttgcctcgaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: DW464827, type: ag Aligns to: chrX:100599195-100599540 (-+) All mismatches: ag (17), ag (33), ag (35), ag (41), ag (42), ag (48), ag (63), ag (73), ag (101), ag (103), ag (109), ag (113), ag (145), ag (156), ag (184), ag (211), ag (212), ag (245), ag (278), ct (309), Editing mismatches: 19, all mismatches: 20, alignment length: 346, cluster length: 262, total number of As: 87 Locations in RNA: 17 33 35 41 42 48 63 73 101 103 109 113 145 156 184 211 212 245 278 Locations in genome: 100599540 100599524 100599522 100599516 100599515 100599509 100599494 100599484 100599456 100599454 100599448 100599444 100599412 100599401 100599373 100599346 100599345 100599312 100599279 Upstream nucleotide (in genome): n a c g a c t a t t c c a c c c a a a Upstream nucleotide summary: a: 7, c: 7, g: 1, t: 3, other: 1 Downstream nucleotide (in genome): a c t a a t c a t g g c a g c a g a g Downstream nucleotide summary: a: 7, c: 4, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 2, at: 0, ca: 1, cc: 2, cg: 2, ct: 2, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 1, other: 1 >chrX:100599195-100599540 (-) aagaccatcctggctaacatggtgaaaccccatctctgctaagaatacaaaaaaaaaaagagctgggcgtggtggcaggcgcctatagtcccagccacttgggaggctgaggcaggagaatggtgtgaaaccgggaggcagagcttgcagtgagccgagattgtgccactgcactctagcctgggtgacagagcaagactccgtctcaaaacaaacaaacaaacaaaaaaaccccacaaaaccttgtgggtgtctgagacaagaacatttcaggcaggaataacagtaagtccgaaggccccaaggtaggaactgcatgcatgatgccgtggagaacagtcaagag >DW464827:17-362 (+) gagaccatcctggctagcgtggtgggaccccgtctctgctaagaatgcaaaaaaaagaagagctgggcgtggtggcaggcgcctgtggtcccggccgcttgggaggctgaggcaggagaatggtgtgagaccgggaggcggagcttgcagtgagccgagattgtgccgctgcactctagcctgggtgacagagcgggactccgtctcaaaacaaacaaacaaacaaaagaaccccacaaaaccttgtgggtgtctgagacaggaacatttcaggcaggaataacagtaagtctgaaggccccaaggtaggaactgcatgcatgatgccgtggagaacagtcaagag End editing Edited EST: DB552886, type: ag Aligns to: chrX:73445286-73445743 (-+) All mismatches: tg (39), ag (157), ag (174), ag (200), ag (227), ag (228), ag (233), ag (253), ag (289), ag (308), ag (317), ag (321), ag (332), ag (358), ag (378), ag (382), Editing mismatches: 15, all mismatches: 16, alignment length: 458, cluster length: 226, total number of As: 60 Locations in RNA: 157 174 200 227 228 233 253 289 308 317 321 332 358 378 382 Locations in genome: 73445587 73445570 73445544 73445517 73445516 73445511 73445491 73445455 73445436 73445427 73445423 73445412 73445386 73445366 73445362 Upstream nucleotide (in genome): c a c c a c a c a t c g g g t Upstream nucleotide summary: a: 4, c: 6, g: 3, t: 2, other: 0 Downstream nucleotide (in genome): g t g a g g c t t c g t t g g Downstream nucleotide summary: a: 1, c: 2, g: 7, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 2, ca: 1, cc: 0, cg: 4, ct: 1, ga: 0, gc: 0, gg: 1, gt: 2, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chrX:73445286-73445743 (-) gtctgctagcattgaattcttttaatttttgtgactcttcaaatgccataatttctcttttgtttgtgaaggatagttttgctagatacagaatttgcagttggcattctttttactttagcagtttgaaaatatttcccattgttggccgggcacagtggctcacacctgtaatcctagcactttgggaggccgaggcaggcggatcatctgaggtcaggagttcaagaccagcctggccaatatggtgaaaccctgtttctactaaaatataaaaattagctgggcatgatggcaggtgcctctaatcccagctactcaggaggctgagatgggagaatcgcttgaacccgggagatgatggctgtggtgagccgagatagcgccgctgcactccagcctgggcggctgagtgagactccatccccgaaaaaaaaaaaagaaaagaaaagaaaaag >DB552886:1-458 (+) gtctgctagcattgaattcttttaatttttgtgactctgcaaatgccataatttctcttttgtttgtgaaggatagttttgctagatacagaatttgcagttggcattctttttactttagcagtttgaaaatatttcccattgttggccgggcacggtggctcacacctgtagtcctagcactttgggaggccgaggcgggcggatcatctgaggtcaggagttcgggaccggcctggccaatatggtgaagccctgtttctactaaaatataaaaattagctgggcgtgatggcaggtgcctctagtcccagctgctcgggaggctgaggtgggagaatcgcttgaacccgggaggtgatggctgtggtgagccgggatggcgccgctgcactccagcctgggcggctgagtgagactccatccccgaaaaaaaaaaaagaaaagaaaagaaaaag End editing Edited EST: BM724619, type: ag Aligns to: chrX:73416641-73417316 (-+) All mismatches: ag (201), ag (202), ag (212), ag (214), ag (220), ag (238), ag (243), ag (254), ag (275), ag (280), ag (331), ag (354), Editing mismatches: 12, all mismatches: 12, alignment length: 676, cluster length: 154, total number of As: 56 Locations in RNA: 201 202 212 214 220 238 243 254 275 280 331 354 Locations in genome: 73417116 73417115 73417105 73417103 73417097 73417079 73417074 73417063 73417042 73417037 73416986 73416963 Upstream nucleotide (in genome): a a a t c a a g t t a t Upstream nucleotide summary: a: 6, c: 1, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): a t t t g a a g g g g g Downstream nucleotide summary: a: 3, c: 0, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 1, at: 2, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 3, tt: 1, other: 0 >chrX:73416641-73417316 (-) acaaaatgaaaaggcaatgtacagataaggagaaaatatttgcaaaccatatatcaggcaaggttttaatattcaggatttaggaagaactcatacaactcaatagcaagacaacatataacctgattaaaaaaaagtggggaaaggacttgaatagacatttcttcaaagatgacagaaaatgaccaacaggtatatgaaatggtgctcaatatcaccagtcatcaggaaaatgcaaatcaaaactactttgagataccacctcatacatgttaggatagctattatcaaaaagacaagagctaacaagtgttggtgagggtg-tggagaagagggagcacttgtacactgttagtgggaatgtattatatattggtgcagccattatggaagacagtatggaggttcctaagtaaattaaaaatagaactaccatatgacccagcaatccctcttctgggtatatccccaaagggaatgagattatctctgcactcccaagtttattgcagcacaattcacaatagtcaagatacagacacaacctaggtgttcatcaatgggcaaatggataaagaaactgtgatatagagagatcaatagatagataattagaatattatttagcctttaaaaagaaggcagtcctgtcatttgccaaaacatggatagacct >BM724619:1-676 (+) acaaaatgaaaaggcaatgtacagataaggagaaaatatttgcaaaccatatatcaggcaaggttttaatattcaggatttaggaagaactcatacaactcaatagcaagacaacatataacctgattaaaaaaaagtggggaaaggacttgaatagacatttcttcaaagatgacagaaaatgaccaacaggtatatgaggtggtgctcagtgtcaccggtcatcaggaaaatgcagatcagaactactttgggataccacctcatacatgttgggatggctattatcaaaaagacaagagctaacaagtgttggtgagg-tggtggagaggagggagcacttgtacactgttggtgggaatgtattatatattggtgcagccattatggaagacagtatggaggttcctaagtaaattaaaaatagaactaccatatgacccagcaatccctcttctgggtatatccccaaagggaatgagattatctctgcactcccaagtttattgcagcacaattcacaatagtcaagatacagacacaacctaggtgttcatcaatgggcanatggataaagaaactgtgatatagagagatcaatagatagataattagaatattatttagcctttanaaagaaggcagtcctgtcatttgccanaacatggatagacct End editing Edited EST: CB963518, type: ag Aligns to: chrX:19877287-19877653 (-+) All mismatches: ag (123), ag (140), ag (211), ag (213), ag (216), ag (251), ag (252), ag (257), ag (265), ag (284), ag (286), ag (293), ag (297), ag (304), ag (317), Editing mismatches: 15, all mismatches: 15, alignment length: 367, cluster length: 195, total number of As: 56 Locations in RNA: 123 140 211 213 216 251 252 257 265 284 286 293 297 304 317 Locations in genome: 19877533 19877516 19877445 19877443 19877440 19877405 19877404 19877399 19877391 19877372 19877370 19877363 19877359 19877352 19877339 Upstream nucleotide (in genome): c g a a t t a c c a t a c c g Upstream nucleotide summary: a: 5, c: 5, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g g a a c a t g g t g c g g g Downstream nucleotide summary: a: 3, c: 2, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 2, ca: 0, cc: 0, cg: 5, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chrX:19877287-19877653 (-) gggggactatcttccagtaagaaatatatcttaccttgcagccttgtaaacacacctgtctttagttatgattgaaatagtaatttcaggctgggcatggtggctcatgcctgtagtcccagaactttgggaggctgaggcgggtggatcacctgaggtcaggagttcaagaccagtctggccaacatggtgaaaccccgttgctacaaaaatacaaaaattagctgggcatgatggcaggtgcctgtaatcccagctactcaggaggctgaggcaggagaatagcttgaacccaggaggcagaggttgcagtgagccgagattgcaccattgtactccagcctgggcaacagagcaagactctgtc >CB963518:3-369 (+) gggggactatcttccagtaagaaatatatcttaccttgcagccttgtaaacacacctgtctttagttatgattgaaatagtaatttcaggctgggcatggtggctcatgcctgtagtcccggaactttgggaggctggggcgggtggatcacctgaggtcaggagttcaagaccagtctggccaacatggtgaaaccccgttgctacagagatgcaaaaattagctgggcatgatggcaggtgcctgtggtcccggctactcgggaggctgaggcaggagagtggcttgagcccgggaggcggaggttgcagtgggccgagattgcaccattgtactccagcctgggcaacagagcaagactctgtc End editing Edited EST: AW236198, type: ga Aligns to: chrX:47088127-47088390 (-+) All mismatches: ga (91), ga (106), ga (109), ga (121), ga (125), ga (129), ga (133), ga (135), ga (144), ga (149), ga (152), ga (158), ga (165), ga (170), ga (172), ga (174), ga (176), ga (178), ga (180), ga (181), ga (195), ga (198), ga (202), ga (205), ga (206), ga (207), ga (208), ga (215), ga (219), ga (221), ga (222), ga (233), ga (236), ga (248), ga (252), ga (255), ga (260), ga (264), Editing mismatches: 38, all mismatches: 38, alignment length: 264, cluster length: 174, total number of Gs: 69 Locations in RNA: 91 106 109 121 125 129 133 135 144 149 152 158 165 170 172 174 176 178 180 181 195 198 202 205 206 207 208 215 219 221 222 233 236 248 252 255 260 264 Locations in genome: 47088300 47088285 47088282 47088270 47088266 47088262 47088258 47088256 47088247 47088242 47088239 47088233 47088226 47088221 47088219 47088217 47088215 47088212 47088210 47088209 47088195 47088192 47088188 47088185 47088184 47088183 47088182 47088177 47088172 47088170 47088169 47088158 47088155 47088143 47088139 47088136 47088131 47088127 Upstream nucleotide (in genome): a a t a a a a a a a t t t t t a g t t g c t t t g g g c t t g c t g a t t t Upstream nucleotide summary: a: 11, c: 3, g: 7, t: 17, other: 0 Downstream nucleotide (in genome): g g a g g g a a g a t g c t a g g t g c c c c g g g c g t g c g t a c g c n Downstream nucleotide summary: a: 6, c: 9, g: 17, t: 5, other: 1 Dinucleotide summary: aa: 3, ac: 1, ag: 7, at: 0, ca: 0, cc: 1, cg: 2, ct: 0, ga: 1, gc: 3, gg: 3, gt: 0, ta: 2, tc: 4, tg: 5, tt: 5, other: 1 >chrX:47088127-47088390 (-) tgaaggagtgatgagagctttgttagcacccagcagacaggccaatgggtgggttgacaggccaatggtggggtgtttgggcaggcagcaggggacaagtgggcaggtgaacatggctcaggcaggtaggcagagagtaagcagggaagatgtagttgggggctgccctgtgaggggtgtggcatccctccagccgctgcctgctggggcc--tcggtctgtggcttagaactcggtgtccaccacgcggaaagctggcctgcctg >AW236198:1-264 (+) tgaaggagtgatgagagctttgttagcacccagcagacaggccaatgggtgggttgacaggccaatggtggggtgtttgggcaggcancaagggacaagtgggcaagtaaacatggctcaagcaagtaagcaaaaagtaagcaaggaaaatatagttaggggctaccctataaaga-tataacatccctccagccactacctactaaaacccgtca-tctataacttagaactcagtatccaccacgcgaaaaactagcctaccta End editing Edited EST: AW236883, type: ga Aligns to: chrX:102162569-102163027 (-+) All mismatches: ga (199), ga (222), ga (307), ga (324), ga (356), ga (365), ga (366), ga (379), ga (398), ga (411), ga (412), ga (421), ga (427), ga (451), ga (455), Editing mismatches: 15, all mismatches: 15, alignment length: 458, cluster length: 258, total number of Gs: 36 Locations in RNA: 199 222 307 324 356 365 366 379 398 411 412 421 427 451 455 Locations in genome: 102162829 102162805 102162720 102162703 102162671 102162662 102162661 102162648 102162629 102162616 102162615 102162606 102162600 102162576 102162572 Upstream nucleotide (in genome): g a t t t t g t t a g t t t t Upstream nucleotide summary: a: 2, c: 0, g: 3, t: 10, other: 0 Downstream nucleotide (in genome): a g t a g g a t t g t t a t a Downstream nucleotide summary: a: 5, c: 0, g: 4, t: 6, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 2, gc: 0, gg: 0, gt: 1, ta: 3, tc: 0, tg: 2, tt: 5, other: 0 >chrX:102162569-102163027 (-) ggttagtctagctgatggtttatcaattttttatcttttcagaaatctaactttttgtttcattaaaattttgtatatttttagtttctattttgtttagtttggctctgacctttactgtttccttccttctactcatttgggatttggtttttccttttttagttccttgaggtgaacagttagattggttatttggaatctttttacttttttgatgtaggcatctattgctacaaatttttctctaagcactgcttttgctgtatcccatagattttggtatgttgtgtttccattttcatttgtttcaaataactttttgatatcctccatattttttttcttgactcagtggtcattctggagcatgctgtttgtttattttccacatatttgtacagtttcccaggttcctcttgttattgatttctacttttattacatttttgtctgaga >AW236883:1-458 (+) ggttagtctagctgatggtttatcaattttttatcttttcagaaatctaactttttgtttcattaaaattttgtatatttttagtttctattttgtttagtttggctctgacctttactgtttccttccttctactcatttgggatttggtttttccttttttagttccttgaggtgaacagttagattggttatttgaa-tctttttacttttttgatgtaagcatctattgctacaaatttttctctaagcactgcttttgctgtatcccatagattttggtatgttgtgtttccattttcatttatttcaaataactttttaatatcctccatattttttttcttgactcagtagtcattctaaagcatgctgtttatttattttccacatatttatacagtttcccaaattcctcttattattaatttctacttttattacatttttatctaaga End editing Edited EST: AW236890, type: ga Aligns to: chrX:153671461-153671814 (-+) All mismatches: ga (53), ga (147), ga (165), ga (169), ga (170), ga (203), ga (212), ga (217), ga (245), ga (246), ga (248), ga (253), ag (276), ga (277), ga (278), ga (281), ga (282), ga (283), ga (287), ga (289), ga (292), ga (293), ga (294), ga (296), ga (299), ga (302), ga (303), ga (304), ga (305), ga (316), ga (327), gc (335), ga (336), ga (337), ga (340), ga (347), Editing mismatches: 34, all mismatches: 36, alignment length: 354, cluster length: 295, total number of Gs: 82 Locations in RNA: 53 147 165 169 170 203 212 217 245 246 248 253 277 278 281 282 283 287 289 292 293 294 296 299 302 303 304 305 316 327 336 337 340 347 Locations in genome: 153671762 153671668 153671650 153671646 153671645 153671612 153671603 153671598 153671570 153671569 153671567 153671562 153671538 153671537 153671534 153671533 153671532 153671528 153671526 153671523 153671522 153671521 153671519 153671516 153671513 153671512 153671511 153671510 153671499 153671488 153671479 153671478 153671475 153671468 Upstream nucleotide (in genome): a c t t g a a a c g g t a g t g g a g t g g a g t g g g c a g g a a Upstream nucleotide summary: a: 10, c: 3, g: 15, t: 6, other: 0 Downstream nucleotide (in genome): a t c g c a a a g g c c g c g g c g c g g a g c g g g c a g g a g g Downstream nucleotide summary: a: 7, c: 9, g: 17, t: 1, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 6, at: 0, ca: 1, cc: 0, cg: 1, ct: 1, ga: 2, gc: 7, gg: 6, gt: 0, ta: 0, tc: 2, tg: 4, tt: 0, other: 0 >chrX:153671461-153671814 (-) ttcaggtttcaaccgttttattgggaggttttgttttctgtgaaatacactagagggtggggaaggggacacattcactttgcaagataagggtttcccaccactaaaggaaaggcatggggcagggcacactggggtttgggtccgttttcccacctccttctgcttggctcacttttcttttctctcagcaagtaccacagaacacaaagacaagaaacaaaacagcaaatcaacctccaacggggccatgcccaagccttccccactcccccaggctgggcaagggctgggaggggctggggcagctcactcgacagccctcaggccacacgggaaggctgcaggctcaga >AW236890:1-354 (+) ttcaggtttcaaccgttttattgggaggttttgttttctgtgaaatacactaaagggtggggaaggggacacattcactttgcaagataagggtttcccaccactaaaggaaaggcatggggcagggcacactggggtttgggtccattttcccacctccttctacttaactcacttttcttttctctcancaantaccacaaaacacaaaaacaaaaaacaaaacagcaaatcaacctccaacaagaccatacccaanccttccccactcccccgaactaaacaaagactaaaaaggactaaaacagctcactcaacagccctcaagccacaccaaaaagctgcaagctcaga End editing Edited EST: DW432503, type: ag Aligns to: chrY:2359122-2359370 (-+) All mismatches: ag (25), ag (26), ag (45), ag (73), ag (81), ag (94), ag (97), ag (99), ag (103), ag (106), ag (112), ag (116), ag (155), ag (165), ag (179), ag (180), ag (214), ag (247), ag (248), tc (257), ag (259), Editing mismatches: 20, all mismatches: 21, alignment length: 249, cluster length: 235, total number of As: 64 Locations in RNA: 25 26 45 73 81 94 97 99 103 106 112 116 155 165 179 180 214 247 248 259 Locations in genome: 2359362 2359361 2359342 2359314 2359306 2359293 2359290 2359288 2359284 2359281 2359275 2359271 2359232 2359222 2359208 2359207 2359173 2359140 2359139 2359128 Upstream nucleotide (in genome): c a a a g t t a t a t c g c g a c g a c Upstream nucleotide summary: a: 7, c: 5, g: 4, t: 4, other: 0 Downstream nucleotide (in genome): a g g c a c a a c a g g a g a c c a a a Downstream nucleotide summary: a: 10, c: 5, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 2, at: 0, ca: 2, cc: 1, cg: 2, ct: 0, ga: 4, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chrY:2359122-2359370 (-) gggaggccaaggcgggtggatcacctgaagtcaggagttcgagaccagcctgaccaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggcgtgatggcaggtgcctgtgatcccagctactgaggaagctgaggcaggaagatcgcttgaacccgggaggcggaggttgcagtgagctgagatcacgccattgcactgcagcctgggtgacagagcgaaactctgtctcaaaaaaa >DW432503:17-265 (+) gggaggccggggcgggtggatcacctgaggtcaggagttcgagaccagcctgaccagcatggtggaaccctgtctctgctgagaatgcagaaattggccgggcgtgatggcaggtgcctgtgatcccagctactgagggagctgaggcgggaagatcgcttgggcccgggaggcggaggttgcagtgagctgagatcgcgccattgcactgcagcctgggtgacagagcgggactctgtcccgaaaaaa End editing Edited EST: DB296779, type: ag Aligns to: chr10:74997193-74997619 (--) All mismatches: ag (38), ag (43), ag (82), ag (97), ag (110), ag (114), ag (118), ag (124), ag (134), ag (150), ag (155), ag (159), ag (201), ag (206), ag (207), ag (215), ag (225), ag (234), ag (238), ag (239), Editing mismatches: 20, all mismatches: 20, alignment length: 427, cluster length: 202, total number of As: 59 Locations in RNA: 38 43 82 97 110 114 118 124 134 150 155 159 201 206 207 215 225 234 238 239 Locations in genome: 74997230 74997235 74997274 74997289 74997302 74997306 74997310 74997316 74997326 74997342 74997347 74997351 74997393 74997398 74997399 74997407 74997417 74997426 74997430 74997431 Upstream nucleotide (in genome): c c a c c t c t c t a t c a c c c t a c Upstream nucleotide summary: a: 4, c: 11, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): g c c g g c g g g g a c g g a g c g g a Downstream nucleotide summary: a: 3, c: 5, g: 12, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 0, ca: 2, cc: 2, cg: 7, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 3, tt: 0, other: 0 >chr10:74997193-74997619 (-) atcccagctacttgggaggctgcggtgggaggatcacttgagcccaggagtttgaggctgcagtgtgctgattgcaccactacactccagcctgggtgatgtagcgagatactttgtctcttaaaaaaaatgaaatgtttggctgagagcggtggctcacgcctgtaatcccagcactttgggaggccaaggtaggtggatcacttggggtcagaagttcaagaccagcctgggcaacttggagaaacactgtctttactaaaagaatacaaaaattagctgggcatggtggcaggtgcctgtagtcccagctactcaggaggctgaggcaggagaatcgattgaacccaggaggaggtggaggctgcagtgagctgagattgcaccacagcactctagcctgggcgacagagtaagactccgtctc >DB296779:1-427 (-) atcccagctacttgggaggctgcggtgggaggatcacttgagcccaggagtttgaggctgcagtgtgctgattgcaccactacactccagcctgggtgatgtagcgagatactttgtctcttaaaaaaaatgaaatgtttggctgagagcggtggctcacgcctgtaatcccagcactttgggaggccggggtgggtggatcgcttggggtcggaagttcgggaccggcctgggcaacttggagaaacactgtctttactaaaagaatgcaagaattggctgggcatggtggcgggtgcctgtggtcccggctgctcgggaggctgaggcgggagaatcgattgagcccaggaggaggtggaggctgcagtgagctgagattgcgccacggcactctagcctgggcgacagagtaagactccgtctc End editing Edited EST: DB338258, type: ag Aligns to: chr10:5622048-5622563 (--) All mismatches: ag (68), ag (78), ag (104), ag (114), ag (124), ag (136), ag (144), ag (145), ag (146), ag (149), ag (151), ag (152), ag (153), ag (158), ag (175), ag (177), ag (194), ag (195), ag (203), ag (248), ag (249), ag (255), ta (511), Editing mismatches: 22, all mismatches: 23, alignment length: 516, cluster length: 188, total number of As: 50 Locations in RNA: 68 78 104 114 124 136 144 145 146 149 151 152 153 158 175 177 194 195 203 248 249 255 Locations in genome: 5622115 5622125 5622151 5622161 5622171 5622183 5622191 5622192 5622193 5622196 5622198 5622199 5622200 5622205 5622222 5622224 5622241 5622242 5622250 5622295 5622296 5622302 Upstream nucleotide (in genome): c c t t c c a a a t a a a t t c a c c a t c Upstream nucleotide summary: a: 8, c: 8, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): g c c a c g a a a c t a a c g t g a g t a c Downstream nucleotide summary: a: 8, c: 6, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 5, ac: 0, ag: 1, at: 2, ca: 1, cc: 3, cg: 3, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 3, tg: 1, tt: 0, other: 0 >chr10:5622048-5622563 (-) aacagttaatgaattagacgttaaaaaaattaaaaacttctgctcatcaaagcaagcgtcataatggacaagccacagactcagaaaaatatttgcatttgcaaaacctgtgtctgacaaaggatttatgagaatttataaagaactcctacaacctaataataaaaacacaaacagcccaattaaaaaatgggcaaaagtcttgatggcccctccttatttctttatagaaatatattagggtcagaggcagtggctcacacttgtaatctcagcactttggaaggctgtggtgggcggatcacttgaggtcaggagttcaagaccagcttggccaacatagtgaaaccctgtctctactaaaaatacaaaaattcgccaggtgtggtggcacatgctggtaatcccagctacttggcaggctgaggcgggaggatcacttgaactcaggaggcagaggttgcagtgagccgaggcactgtactgcagcctgggctcagagtgagactctatttc >DB338258:1-516 (-) aacagataatgaattagacgttaaaaaaattaaaaacttctgctcatcaaagcaagcgtcataatggacaagccacagactcagaaaaatatttgcatttgcaaaacctgtgtctgacaaaggatttatgagaatttataaagaactcctacaacctaataataaaaacacaaacagcccaattaaaaaatgggcaaaagtcttgatggcccctccttatttctttatagaaatatattagggtcagaggcagtggctcacgcttgtggtctcagcactttggaaggctgtggtgggcggatcacttgaggtcgggagttcgggaccagcttggccaacgtggtgaaaccctgtctctgctaagggtgcagggattcgccgggtgtggtggcgcatgctggtgatcccagctgcttggcaggctgaggcgggaggatcgcttgaactcgggaggcagaggttgcagtgagccgaggcactgtactgcagcctgggctcagagtgagactctatttc End editing Edited EST: DW427158, type: ag Aligns to: chr10:65009339-65009608 (--) All mismatches: ag (35), ag (78), ag (105), ag (110), ag (127), ag (143), ag (144), ag (168), ag (170), ag (180), ag (192), ag (245), ag (259), ag (261), ag (266), Editing mismatches: 15, all mismatches: 15, alignment length: 271, cluster length: 231, total number of As: 44 Locations in RNA: 35 78 105 110 127 143 144 168 170 180 192 245 259 261 266 Locations in genome: 65009364 65009407 65009434 65009439 65009456 65009471 65009472 65009496 65009498 65009508 65009520 65009573 65009587 65009589 65009594 Upstream nucleotide (in genome): t g t c t a t c t t c a g t c Upstream nucleotide summary: a: 2, c: 4, g: 2, t: 7, other: 0 Downstream nucleotide (in genome): c c t c g t a g c g g t a g g Downstream nucleotide summary: a: 2, c: 4, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 2, ca: 0, cc: 1, cg: 3, ct: 0, ga: 1, gc: 1, gg: 0, gt: 0, ta: 1, tc: 2, tg: 3, tt: 1, other: 0 >chr10:65009339-65009608 (-) tcactctgtagcccaggctagaatgcagtggtgcaatcttggcccagtgcgaactctgcctcccggattaaagcgattctcctgcctcagcctcccgagtagttgggactacaggcgcacgccaccacgcctggctaatttttgta-ttttttagtagagacggggtttcaccttattggacaggctggtctggaactcctgaccttgtgatctgcctgccttggcctcccaaagtgctgggattacaggcatgatccactgtgcccggcc >DW427158:10-280 (-) tcactctgtagcccgggctgggatgcagtggtgcagtcttggcccagtgcgaactctgcctcccggattaaagcgattctcctgcctcggcctcccgagtggttgggactgcgggcgcacgccaccacgcctggctggtttttgtatttttttggtagagacggggtttcgccttgttggacaggctggtctggaactcctggccttgtgatctgcctgccttggcctcccaaagtgctgggattgcaggcatgatccactgtgcccggcc End editing Edited EST: BF941412, type: ag Aligns to: chr10:97147751-97148185 (--) All mismatches: ag (39), ag (47), ag (54), ag (59), ag (63), ag (71), ag (72), ag (83), ag (92), ag (98), ag (108), ag (115), ag (119), ag (125), ag (132), ag (135), ag (152), ag (156), ag (160), ag (162), ag (164), ag (165), ag (175), ag (180), ag (181), ag (191), ag (200), ag (214), ag (224), ag (227), Editing mismatches: 30, all mismatches: 30, alignment length: 435, cluster length: 189, total number of As: 55 Locations in RNA: 39 47 54 59 63 71 72 83 92 98 108 115 119 125 132 135 152 156 160 162 164 165 175 180 181 191 200 214 224 227 Locations in genome: 97147789 97147797 97147804 97147809 97147813 97147821 97147822 97147833 97147842 97147848 97147858 97147865 97147869 97147875 97147882 97147885 97147902 97147906 97147910 97147912 97147914 97147915 97147925 97147930 97147931 97147941 97147950 97147964 97147974 97147977 Upstream nucleotide (in genome): c c a g c a c a a c g t c t g c c a t a a a c a a a c c c g Upstream nucleotide summary: a: 11, c: 12, g: 4, t: 3, other: 0 Downstream nucleotide (in genome): c c g g g a a c c g g c g g g g a a c t a a t c a a g g c t Downstream nucleotide summary: a: 8, c: 8, g: 11, t: 3, other: 0 Dinucleotide summary: aa: 6, ac: 3, ag: 1, at: 1, ca: 2, cc: 3, cg: 6, ct: 1, ga: 0, gc: 0, gg: 3, gt: 1, ta: 0, tc: 2, tg: 1, tt: 0, other: 0 >chr10:97147751-97148185 (-) gctggctctagtgtggagaaatgcagacatgctccttacactgttttcccattccttggtatttctaactgcatacccatcatccccagtgttgacttagcctcccaggagaaggcagcaaggaacagcaactattaatagaaggtgtagaggccgggcagtggctcatgcctgtaatctcagctctttgggaggctgatgcgggtggatcacctgcggtcaggagttcgagaccagcttgacaaatatggtgaaaccccatctctactaaaaatacaaaaacaagctgggcgtggtggcaggagcttgtagtcccagctactcgggaggctgtgacaggagaactgcttgaacccgggaggcaaatgttgcagtgagccaagatcgcaccactgcactccagcctgggcaacagagtgagactctgtctcaaaa >BF941412:1-435 (-) gctggctctagtgtggagaaatgcagacatgctccttacactgttttcccattccttggtatttctaactgcatacccatcatccccagtgttgacttagcctcccaggagaaggcagcaaggaacagcaactattaatagaaggtgtagaggccgggcagtggctcatgcctgtaatctcagctctttgggaggctgatgcgggtgggtcgcctgcggtcgggagttcgagaccggcttgacagatatggtgaggccccgtctctactaggagtgcaagaacgagctgggcgtggtggcgggggcttgtggtcccggctgctcggggggctgtgacgggagagctgcttgagcccgggaggcggatgttgcggtgggccaggatcgcgccactgcgctccagcctgggcaacagagtgagactctgtctcaaaa End editing Edited EST: AI824591, type: ag Aligns to: chr10:74345763-74346056 (--) All mismatches: ag (5), ga (9), ag (58), ag (63), ag (73), ag (87), ag (96), ag (98), ag (100), gc (127), ag (138), ag (142), ag (143), ag (177), ag (204), ag (207), ag (211), ag (215), ag (216), ag (280), ag (281), Editing mismatches: 19, all mismatches: 21, alignment length: 294, cluster length: 277, total number of As: 92 Locations in RNA: 5 58 63 73 87 96 98 100 138 142 143 177 204 207 211 215 216 280 281 Locations in genome: 74345767 74345820 74345825 74345835 74345849 74345858 74345860 74345862 74345900 74345904 74345905 74345939 74345966 74345969 74345973 74345977 74345978 74346042 74346043 Upstream nucleotide (in genome): a c c c c g g a t a c a c t a a t a t Upstream nucleotide summary: a: 7, c: 6, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): a g c t g g g g c g a t a g c g a t a Downstream nucleotide summary: a: 5, c: 3, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 3, at: 2, ca: 2, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr10:74345763-74346056 (-) ggctcacaaccgtaattccagaactttgggaggctaaggtgggagtgtggcttgagctcaggagttcgagactagcttaagcaacatagcaagacctcatctctactaaaaataaaaattagctgggtgtggtggtgtgcacctgtagtccaagctacttggaggctgagtcaggagaactgcttgagcctggaagagagaggctgcagtgagctatgaccatgccattgcactccagcccaggcaacagagcgataccctgtctcaaaaaaaaaaaaaaaaaaagaaaaaaaa >AI824591:1-294 (-) ggctcacanccgtggttccagaactttgggaggctaaggtgggagtgtggcttgagctcaggagttcgagactagcttgggcagcatggcgagacctcatctctactaaaaataaaagttagctgggtgtggtggtgtgcacctgtagtccgggctgcttggaggctcagtcaggagaactgcttgagcctggaggggggaggctgcggtgagctatgaccgtgccattgcgctccggcccaggcaacagagcgataccctgtctcaaaaaaaaaaaaaaaaaaaaaaagaaaa End editing Edited EST: T17465, type: ag Aligns to: chr11:73396634-73396892 (--) All mismatches: ag (34), ag (108), ag (127), ag (161), ag (174), ag (180), ag (184), ag (213), ag (214), ag (227), ag (249), ag (252), Editing mismatches: 12, all mismatches: 12, alignment length: 258, cluster length: 220, total number of As: 44 Locations in RNA: 34 108 127 161 174 180 184 213 214 227 249 252 Locations in genome: 73396667 73396741 73396761 73396795 73396808 73396814 73396818 73396847 73396848 73396861 73396883 73396886 Upstream nucleotide (in genome): t c t c t t t a c c a c Upstream nucleotide summary: a: 2, c: 5, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): c t a c c g g g a c t t Downstream nucleotide summary: a: 2, c: 4, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 1, cc: 2, cg: 0, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr11:73396634-73396892 (-) agtggcataatctcggctcactgcaacctccacctccccggttcaagcgattctcctgcctcaccctcccaagtagctaggattacaggcatctgccaccacacctggctattttttttttttgtatttttaatagagatggggtttcaccatgttggcccggctggtctcaaactcctgacctcagatgatccacccgtcttggcctcccaaagtcctgggattacaggcgtgaggcaccgcacctggtcgctacttt >T17465:1-258 (-) agtggcgtagtctcggctcactgcaacctccgcctccccggttcggncgantcncctgcctcaccctcccnantggctgggattgcaggcatctgccgccacacctggctattttttttttttgtatttttgatagagat-gggtttcaccgtgttggcccggctggtctcaaactcctgacctcagatgatccacccgtcttggcctcccaaagtcctgggattgcaggcgtgaggcaccgcacctggtcgctacttt End editing Edited EST: DB343841, type: ag Aligns to: chr11:58897606-58897983 (--) All mismatches: ag (178), ag (179), ag (180), ag (187), ag (188), ag (192), ag (200), ag (205), ag (206), ag (221), ag (222), ag (231), ag (236), ag (245), ag (276), ag (284), ag (302), ag (311), ag (313), ag (349), Editing mismatches: 20, all mismatches: 20, alignment length: 378, cluster length: 172, total number of As: 73 Locations in RNA: 178 179 180 187 188 192 200 205 206 221 222 231 236 245 276 284 302 311 313 349 Locations in genome: 58897783 58897784 58897785 58897792 58897793 58897797 58897805 58897810 58897811 58897826 58897827 58897836 58897841 58897850 58897881 58897889 58897907 58897916 58897918 58897954 Upstream nucleotide (in genome): a a a a c a t a a a t a t c a t a a a g Upstream nucleotide summary: a: 13, c: 2, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): t a a t a g a t a g a a c a a t a g a a Downstream nucleotide summary: a: 12, c: 1, g: 3, t: 4, other: 0 Dinucleotide summary: aa: 7, ac: 0, ag: 3, at: 3, ca: 2, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 0, tt: 1, other: 0 >chr11:58897606-58897983 (-) ccatatcagaacttgagagagattatttgaaattggaacatatgtttaaagggaaggagaatgtaaaagtctggaaaatttgcagcctgaccatatggtagaaaagaaaaacccattttctgggaagaaactcaagctagctacagaaatttgcataagtaacgagaagccaaatcttaattgccaagacaatggggaaaatgtctccagggcatgtcagagaacttagtggcagctcctcccatcacaagcctggttacacggttaggtggaaaagacaagttgtatgtagagatcattatcagaaattgctaaactctgtcatcaaaaactctgttggaatggattttaaaatttcttaataaaagatgaaacatg >DB343841:1-378 (-) ccatatcagaacttgagagagattatttggaattggaacatatgtttaaagggaaggagaatgtagaggtctggaagatttgcagcctgaccatgtggtagagaagaaaaacccattttctgggaagaaactcgagctagctgcagagatttgcatgggtaacgagaagccaggtcttgattgccaggacggtggggagggtgtctccagggcatgtcagagaacttagtggcagctcctcccatcacaagcctggttacacggttaggtggaaaagacaagttgtatgtagagatcattatcagaaattgctaaactctgtcatcaaaaactctgttggaatggattttaaaatttcttaataaaagatgaaacatg End editing Edited EST: DW465885, type: ag Aligns to: chr11:66710927-66711254 (--) All mismatches: ag (17), ag (35), ag (47), ag (94), ag (105), ag (109), ag (125), ag (131), ag (134), ag (182), ag (194), ag (197), ag (246), ag (249), tg (327), Editing mismatches: 14, all mismatches: 15, alignment length: 327, cluster length: 233, total number of As: 43 Locations in RNA: 17 35 47 94 105 109 125 131 134 182 194 197 246 249 Locations in genome: 66710935 66710953 66710965 66711012 66711023 66711027 66711043 66711049 66711052 66711100 66711112 66711115 66711164 66711167 Upstream nucleotide (in genome): c t a c c t c t t t t a a c Upstream nucleotide summary: a: 3, c: 5, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): c c g a g g g g g c g g g c Downstream nucleotide summary: a: 1, c: 4, g: 9, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 3, at: 0, ca: 1, cc: 2, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 4, tt: 0, other: 0 >chr11:66710927-66711254 (-) ttttttttttttttttttttttttttttgagccggagtcttgctctatagcccaggctggagagcagtggcgcgatctctgctcaccacaagctccgctgcttcccgggttcatgccattctcctgcctcagcctcccaagtagctgggggactacaggcgcctgccaccacgcccggcaaattttttttttttgcatttttagtagagacagggttccatcgtgttagccaggatggtctcaatctcctgacctcatgatcctcatgatccgggcctcggcctcccaaagtgttgggattacaggcgtgagccaccgcacccggccg >DW465885:9-335 (-) ttttttttgttttttttttttttttttt-agccggagtcttgctctatagcccaggctggagagcagtggcgcgatctctgctcaccgcaggctccgctgcttcccgggttcatgccattctcctgcctcagcctcccaggtggctgggggactgcaggcgcctgccaccacgcccggcaaattttttttttttgcatttttggtggagacggggttccatcgtgttggccgggatggtctcgatctcctgacctcatgatcctcatgatccgggcctcggcctcccaaggtgttgggattgcaggcgtgagccaccgcgcccggccg End editing Edited EST: CB068814, type: ag Aligns to: chr11:17158978-17159387 (--) All mismatches: ag (52), ag (53), ag (57), ag (90), ag (111), ag (116), ag (117), ag (135), ag (143), ag (147), ag (152), ag (172), ag (186), ag (206), ag (289), Editing mismatches: 15, all mismatches: 15, alignment length: 410, cluster length: 238, total number of As: 65 Locations in RNA: 52 53 57 90 111 116 117 135 143 147 152 172 186 206 289 Locations in genome: 17159029 17159030 17159034 17159067 17159088 17159093 17159094 17159112 17159120 17159124 17159129 17159149 17159163 17159183 17159266 Upstream nucleotide (in genome): a c g c c a t c t a t a g c a Upstream nucleotide summary: a: 5, c: 5, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g a g g g t a t g a c c c g g Downstream nucleotide summary: a: 3, c: 3, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 1, ca: 1, cc: 0, cg: 3, ct: 1, ga: 0, gc: 1, gg: 1, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr11:17158978-17159387 (-) taaaaatgcgctagcttggcaaagagaaatgtttatagggtctagctctagtatcagaaaggaaagcagaggaagggtggatttggaactgatagacaataaattgataattggcacttaaagagtagtgtaggccaggcgcagtggctcacgcctgtcatcccagcactttgggaggctgaggcgggcggatcatctgaggtcaggagtttgagaccagcctgaccaacatggtgaaaccccatctctactaaaaatacaaaaattagccaggcatggtggcagacacctgtaatcccagctactcgggaggctgaggcaggagaatcacttgaacccaggaggttgcagtgagccaagatcccaccactgcactccagcctgggcagcagaatgagagtccgtctcaa >CB068814:1-410 (-) taaaaatgcgctagcttggcaaagagaaatgtttatagggtctagctctagtatcagaaaggaaagcagaggaagggtggatttggaactgatagacaataaattgataattggcacttaaggagtagtgtaggccaggcgcagtggctcacgcctgtcatcccagcactttgggaggctgaggcgggcggatcatctgaggtcgggagtttgagaccagcctggccaacatggtgaagccccatctctactaaaaatgcaaagattggccaggcgtggtggcagacacctgtggtcccggctactcgggaggctgaggcgggagaatcacttgaacccaggaggttgcagtgggccgggatcccaccactgcactccagcctgggcagcagaatgagagtccgtctcaa End editing Edited EST: BE206092, type: ag Aligns to: chr11:72466353-72466764 (--) All mismatches: ag (61), ag (69), ag (76), ag (87), ag (89), ag (93), ag (101), ag (106), ag (109), ag (120), ag (141), ag (157), ag (168), ag (172), ag (174), ag (175), ag (182), ag (199), ag (205), ag (207), ag (208), ag (222), ag (223), ag (250), ag (299), Editing mismatches: 25, all mismatches: 25, alignment length: 412, cluster length: 239, total number of As: 61 Locations in RNA: 61 69 76 87 89 93 101 106 109 120 141 157 168 172 174 175 182 199 205 207 208 222 223 250 299 Locations in genome: 72466413 72466421 72466428 72466439 72466441 72466445 72466453 72466458 72466461 72466472 72466493 72466509 72466520 72466524 72466526 72466527 72466534 72466551 72466557 72466559 72466560 72466574 72466575 72466602 72466651 Upstream nucleotide (in genome): c t g g c a g c a t a g t a a c a g c a c a c c c Upstream nucleotide summary: a: 8, c: 9, g: 5, t: 3, other: 0 Downstream nucleotide (in genome): c t g g g g a c t a t t g a a a a a t c a g a g g Downstream nucleotide summary: a: 9, c: 3, g: 8, t: 5, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 2, at: 2, ca: 3, cc: 2, cg: 3, ct: 1, ga: 2, gc: 0, gg: 2, gt: 1, ta: 1, tc: 0, tg: 1, tt: 1, other: 0 >chr11:72466353-72466764 (-) tcagttcctggctcccaaggtgagtggccttgggattttggggaggggtgttgaagactggaaagaggactatggaatgaggtgggtggagtcaagcctggagcctgagggccaggcgtggtggctcatgcctgtaatcccagcactttgggaggccttggcaggtggattacctgaggtcgggagttcaagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagctgagtgtgatggtgggtgcctgtaatcccagctactcgggaggctaaggcaggagaatcacttgaacctggaaggcagaggttgcagtgagccgatatcatgccactgcactccagcctgggccacacagtgagattccgtctcaaaaaaaaaaaaaaaaaaaaa >BE206092:1-412 (-) tcagttcctggctcccaaggtgagtggccttgggattttggggaggggtgttgaagactggaaagaggactatggaatgaggtgggtggagtcaagcctggagcctgagggccgggcgtggtggctcatgcctgtaatcccagcactttgggaggccttggcgggtggattacctgaggtcgggagttcgggaccagcctggccggcgtggtggaaccctgtctctactagaaatacggagattggctgagtgtggtggtgggtgcctgtagtcccagctactcgggaggctgaggcaggagagtcgcttggacctggagggcgggggttgcagtgggccgatgtcatgccgctgcactccagcctgggccacacagtgagattccgtctcaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: AL545057, type: ga Aligns to: chr11:57156049-57156184 (--) All mismatches: ga (206), ga (211), ga (219), ga (223), ga (225), ga (242), ga (259), ga (266), ga (273), ga (313), ga (315), ga (321), ga (326), ga (330), Editing mismatches: 14, all mismatches: 14, alignment length: 136, cluster length: 125, total number of Gs: 34 Locations in RNA: 206 211 219 223 225 242 259 266 273 313 315 321 326 330 Locations in genome: 57156050 57156055 57156063 57156067 57156069 57156086 57156103 57156110 57156117 57156157 57156159 57156165 57156170 57156174 Upstream nucleotide (in genome): c a a a g a t a c g a t g t Upstream nucleotide summary: a: 6, c: 2, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): g g g g a g t t a g g c a c Downstream nucleotide summary: a: 3, c: 2, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 5, at: 1, ca: 1, cc: 0, cg: 1, ct: 0, ga: 2, gc: 0, gg: 1, gt: 0, ta: 0, tc: 2, tg: 0, tt: 1, other: 0 >chr11:57156049-57156184 (-) tagtttacttgccggaggtgctacaggggcaacctggtttccatccacaacttcaatattaattatcgaatccagtgttctgtcagcgcgctcaaccagggtcaagtctggattggaggcaggatcacaggctcgg >AL545057:205-340 (-) tagtttacttaccgaaggtactacaagagcaacctvgtttccatccacaacttcaatattaattatcaaatccaatgttctatcagcgcgctcaaccaaggtcaagtctggattgaaagcaaratnacaagctcag End editing Edited EST: DB299574, type: ag Aligns to: chr12:105590232-105590627 (--) All mismatches: ag (50), ag (79), ag (94), ag (104), ag (107), ag (115), ag (120), ag (121), ag (181), ag (234), ag (260), ag (263), Editing mismatches: 12, all mismatches: 12, alignment length: 396, cluster length: 214, total number of As: 52 Locations in RNA: 50 79 94 104 107 115 120 121 181 234 260 263 Locations in genome: 105590281 105590310 105590325 105590335 105590338 105590346 105590351 105590352 105590412 105590465 105590491 105590494 Upstream nucleotide (in genome): g a c g c c a t a c a t Upstream nucleotide summary: a: 4, c: 4, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): g c g g g g t a c g t t Downstream nucleotide summary: a: 1, c: 2, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 2, ca: 0, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 0, tg: 0, tt: 1, other: 0 >chr12:105590232-105590627 (-) ctttcctcagatataaaatagggataagatctatgttactccatctgccacagatgagaggaacaagggaactggcagatgtggggtctctttaaaaagttaaagcctcggctgggtacagtggctcacgcctataatcccagcactttgggaggccgaggcaggtggatcccctgaggttgggagtttgagatcagcatgaccaacatggagaaaccccgtctctactggaaatacaaaattggccgggcacgttagtggtggcgcatgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgtggtgagccgagatcacaccattgcactccagcctggtgcaacaagagcaaaactccatc >DB299574:1-396 (-) ctttccncanatataaaatagggataagatctatgttactccatctgccacagatgagaggaacaagggaactggcagatgtggggtctctttaaaaagttaaagcctcggctgggtacagtggctcacgcctgtagtcccagcactttgggaggccgaggcgggtggatcccctgaggttgggagtttgagatcagcatgaccaacatggagaagccccgtctctactggaaatacaaaattggccgggcacgttagtggtggcgcatgcctgtggtcccggctactcggggggctgaggcgggagaatcgcttgagcctgggaggcggaggttgtggtgagccgggatcacaccattgcactccagcctggtgcaacaagagcaaaactccatc End editing Edited EST: DB299778, type: ag Aligns to: chr12:100177968-100178285 (--) All mismatches: ag (115), ag (121), ag (128), ag (153), ag (154), ag (158), ag (160), ag (163), ag (164), ag (178), ag (183), ag (188), ag (255), ag (256), Editing mismatches: 14, all mismatches: 14, alignment length: 319, cluster length: 142, total number of As: 44 Locations in RNA: 115 121 128 153 154 158 160 163 164 178 183 188 255 256 Locations in genome: 100178082 100178088 100178095 100178120 100178121 100178125 100178127 100178130 100178131 100178145 100178150 100178155 100178222 100178223 Upstream nucleotide (in genome): c t g a a t a a t a g a a t Upstream nucleotide summary: a: 7, c: 1, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): g g g a a c t a a c t c t a Downstream nucleotide summary: a: 5, c: 3, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 0, at: 2, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 1, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr12:100177968-100178285 (-) agaaagcaatatgaaatgattatgaaagtgttcagggg-ccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccaagacgggtggatcatgaggtcaggagatcgagaccatcctggctaacatgatgaaaccccatctctactaaaaatacaaaaaaattagctgggtgtggtggcaggagcctgtagtcccagcttctcgggaggctgagacaggggaatggtgtgaaccctggaggcggagcttgcagtgagctgagatcgtgccactgcactccagcctgcgccacagagcgagactccgtctc >DB299778:1-319 (-) agaaancaatatgaaatgattatgaaagtgttcaggggcccaggcgcggtggctcacgcctgtggtcccagcactttgggaggccaagacgggtggatcatgaggtcaggagatcgagaccatcctggctagcatggtgaagccccatctctactggaagtgcaaggaaattagctgggtgtggtggcaggggcctgtggtcccggcttctcgggaggctgagacaggggaatggtgtgaaccctggaggcggagcttgcagtgagctgagatcgtgccactgcactccagcctgcgccacagagcgagactccgtctc End editing Edited EST: DB317901, type: ag Aligns to: chr12:121395975-121396287 (--) All mismatches: ag (18), ag (43), ag (45), ag (68), ag (75), ag (79), ag (85), ag (88), ag (120), ag (121), ag (150), ag (152), ag (153), ag (154), ag (182), ag (196), Editing mismatches: 16, all mismatches: 16, alignment length: 313, cluster length: 179, total number of As: 51 Locations in RNA: 18 43 45 68 75 79 85 88 120 121 150 152 153 154 182 196 Locations in genome: 121395992 121396017 121396019 121396042 121396049 121396053 121396059 121396062 121396094 121396095 121396124 121396126 121396127 121396128 121396156 121396170 Upstream nucleotide (in genome): c c c c c a c a a t a a a c c a Upstream nucleotide summary: a: 7, c: 8, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): g c c g g c c t t a g a a a a g Downstream nucleotide summary: a: 5, c: 4, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 2, at: 2, ca: 2, cc: 3, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr12:121395975-121396287 (-) ccttaatttgaggcctctagtctctagaaatgcaatgtgcaaggcggggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggccttaaggtcaggagttcaagaccagcctggccaacatggtgaaaccctgcctcaaaatgcaaaaagtagccaggcgtggtggcatgtgcctgtaatcctagctactcaggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagccgagatcacaccagtgcactccagcctgggcaacagcgtgagactccatctc >DB317901:1-313 (-) ccttaatttgaggcctctagtctntagaaatgcaatgtgcaaggcggggcgcggtggctcacgcctgtaatcccagcactttgggaggctgaggcgggccttaaggtcaggagttcaggaccagcctggccgacatggtgaaaccctgcctcaaaatgcgggaggtagccaggcgtggtggcatgtgcctgtggtcctagctactcaggaggctgaggcaggagagtcgcttgagcccgggaggcggaggttgcagtgagccgagatcgcgccagtgcactccagcctgggcaacggcgtgagactccatctc End editing Edited EST: DW418217, type: ag Aligns to: chr12:39213288-39213582 (--) All mismatches: ag (102), ag (107), ag (110), ag (124), ag (127), ag (169), ag (179), ag (204), ag (207), ag (228), ag (234), ag (260), ag (289), Editing mismatches: 13, all mismatches: 13, alignment length: 295, cluster length: 188, total number of As: 34 Locations in RNA: 102 107 110 124 127 169 179 204 207 228 234 260 289 Locations in genome: 39213380 39213385 39213388 39213402 39213405 39213447 39213457 39213482 39213485 39213506 39213512 39213538 39213567 Upstream nucleotide (in genome): t c c t t t t c c a c t g Upstream nucleotide summary: a: 1, c: 5, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): g t c g g c g t c g c g g Downstream nucleotide summary: a: 0, c: 4, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 3, cg: 0, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 5, tt: 0, other: 0 >chr12:39213288-39213582 (-) ttttttttttttttgagacggagtcttgctctgtcacccaggctagagtgcagtggtgtgatcttggctcactgcaaggtccgcctcccgggttcacaccattctcctgcgtcagcctcccgagtagctgggactacaggcgcccgccatcacgcccggctaattttttgtatttttagtagagacagggtttcaccatgttagccaggatggtctcgatctcctgaccttgtgatccgcctgcctcggcctcccaaagtgctgcaattacagacgtgagccaccgcgcccggcc >DW418217:10-304 (-) ttttttttttttttgggacggagtcttgctctgtcacccaggctggagtgcagtggtgtgatcttggctcgctgcagggtccgcctcccgggttcacgccgttctcctgcgtcagcctcccgagtggctgggactgcaggcgcccgccatcacgcccggctaattttttgtatttttggtggagacagggtttcgccgtgttggccaggatggtctcgatctcctgaccttgtgatccgcctgcctcggcctcccaaagtgctgcaattacagacgtgagccaccgcgcccggcc End editing Edited EST: CA416374, type: ag Aligns to: chr12:57124141-57124484 (--) All mismatches: ac (73), ag (105), ag (123), ag (137), ag (164), ag (187), ag (191), ag (195), ag (199), ag (202), ag (222), ag (232), ag (233), ag (248), ag (256), ag (286), ag (288), ag (300), ag (301), ag (311), cg (314), ag (352), ag (356), Editing mismatches: 21, all mismatches: 23, alignment length: 346, cluster length: 251, total number of As: 67 Locations in RNA: 105 123 137 164 187 191 195 199 202 222 232 233 248 256 286 288 300 301 311 352 356 Locations in genome: 57124230 57124248 57124262 57124289 57124312 57124316 57124320 57124324 57124327 57124347 57124357 57124358 57124373 57124381 57124411 57124413 57124425 57124426 57124435 57124476 57124480 Upstream nucleotide (in genome): t a a a c t a a t a a c c c c t a a c c t Upstream nucleotide summary: a: 9, c: 7, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): c c g t g g a g c c c a a g g c g a g g g Downstream nucleotide summary: a: 4, c: 6, g: 10, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 3, at: 1, ca: 2, cc: 0, cg: 5, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 3, tg: 2, tt: 0, other: 0 >chr12:57124141-57124484 (-) tgttagccaggatggtctcgatctcctgaccttgtgatctgcctgtctcagcctc-ccaaagtgctgggattacaggtgtgagccaccacacccgactgaggccaggagttcaaggccagcctggccaacatggtgaaacccggtctccactaaaaatacaagaaaattagccaggtgtggtggcgggcacctgtaatcccagctactaagaaggctgaggcaagagaatcacctgaacccatgaggtggaggttacagtgagctgagatcacgccactgcac-tccatcctgggcaacataaataaaaattataaaataaataaaacgtattaaacttgtgaaaa >CA416374:15-360 (-) tgttggccgggatggtctcgatctcctgaccttgtgatctgcctgtgtcggcctcaccagggtgctgggattgcgggtgtgagccaccacacccgactgaggccgggagttcgaggccagcctggccggcatggtgaagcccggtctccactaaaaatgcaggaagattggccgggtgtggtggcgggcacctgtagtcccagctactaagaaggctgaggcaggagaatcacctgagcccatgaggtggaggttgcagtgagctgagatcacgccactgcacctccctcctgggcaacataaataaaaattataaaataaataaaacgtattaaacttgtgaaaa End editing Edited EST: AA132657, type: ag Aligns to: chr12:121410028-121410451 (--) All mismatches: ag (126), ag (158), ag (199), ag (207), ag (220), ag (234), ag (263), ag (265), ag (284), ag (289), ag (292), ag (297), ag (342), ag (363), ag (368), ag (369), ag (375), ag (382), ag (421), Editing mismatches: 19, all mismatches: 19, alignment length: 425, cluster length: 296, total number of As: 95 Locations in RNA: 126 158 199 207 220 234 263 265 284 289 292 297 342 363 368 369 375 382 421 Locations in genome: 121410151 121410183 121410224 121410232 121410245 121410259 121410288 121410290 121410309 121410314 121410317 121410322 121410367 121410388 121410393 121410394 121410400 121410407 121410446 Upstream nucleotide (in genome): t c t c c t a a c a t c c c a t t t a Upstream nucleotide summary: a: 5, c: 7, g: 0, t: 7, other: 0 Downstream nucleotide (in genome): a c g g g g t a t c a t g g t a c g g Downstream nucleotide summary: a: 4, c: 3, g: 8, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 2, ca: 0, cc: 1, cg: 4, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 3, tc: 1, tg: 3, tt: 0, other: 0 >chr12:121410028-121410451 (-) aaaaaagaaaaagaaaaaaaaaaaaaggaacagccggacatggtagctcatacctgtaatcccagcgctttgggagaccgaggcaggtggatcacctgaggtcaggagttccagatcagcctggccaacatggtaaaaccccatctctactaaaaatacaaaaattagctggatgtggtggcgcacacctgtagtcccagatactcaggaggctgaggcaggagaatagcttgaacccgggaggcggaggttgcagtgagcagagatcacgccactgcactccagcctgggcgatagagtaacaatccgtctcaaaaaaa-tctgaaaattaaaaattaaaaagtgaacagttgtttagtaagtgcagtaggtaggccaagataactattaagtatgtcctaacaaggtagctgcttgaaaaaaa >AA132657:2-426 (-) aaaanggaaaangaaaaaaaaaaaaaggaacagccggacatggtggctcatgcctgtggtcccggcgctttgggagaccgaggcgggtggatcacctgaggtcaggagttccagatcagcctggccaacgtggtgaagccccgtctctactaaaaatacaagagttagctggatgtggtggcgcacacctgtggtcccagatactcgggaggctgaggcgggagaatggcttgaacccgggaggcggaggttgcagtgagcagagatcgcgccactgcactccagcctgggcgatagagtgacaatccgtctcaaaaaaaatctgaaaattaaaaattaaaaagtgaacagttgtttagtaagtgcagtaggtaggccaagataactattaagtatgtcctaacaaggtagctgcttgaaaaaaa End editing Edited EST: AA507925, type: ag Aligns to: chr12:56700327-56700782 (--) All mismatches: ag (36), ag (73), ag (83), ag (101), ag (102), ag (110), ag (124), ag (130), ag (134), ag (140), ag (150), ag (222), ag (225), ag (251), ag (252), ag (254), ag (258), gc (264), ag (267), ag (342), ag (372), ag (385), ag (391), ag (395), ag (400), Editing mismatches: 24, all mismatches: 25, alignment length: 457, cluster length: 364, total number of As: 101 Locations in RNA: 36 73 83 101 102 110 124 130 134 140 150 222 225 251 252 254 258 267 342 372 385 391 395 400 Locations in genome: 56700362 56700397 56700407 56700425 56700426 56700434 56700448 56700454 56700458 56700464 56700474 56700546 56700549 56700575 56700576 56700578 56700582 56700592 56700666 56700696 56700710 56700716 56700720 56700725 Upstream nucleotide (in genome): c g g a t c t c c t t g c a t t c c t t t c t a Upstream nucleotide summary: a: 3, c: 8, g: 3, t: 10, other: 0 Downstream nucleotide (in genome): c t g g a g g t g g g g g t a t c g c t g g g a Downstream nucleotide summary: a: 3, c: 3, g: 13, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 1, ca: 0, cc: 2, cg: 5, ct: 1, ga: 0, gc: 0, gg: 2, gt: 1, ta: 2, tc: 1, tg: 5, tt: 2, other: 0 >chr12:56700327-56700782 (-) gagttcgagaccaagcctgggcaacatgccaaaaacccatctctaccaaaaatacaaaaattagccaggtgtagtggcatgcgcctataatcccagctactagggaggcagaggttacagtgaagattgcgccactgcacttcagcctgggcaataaagtgcgactcaaaaaaaggtttagtcca-gatgcagtggctcacacctataatcccaacactttgggaggctgaggcaggaggatcttttgagcccaggagtttgagaccaccctggacaacatagcaggaccctgtctatgcaaaaaaattagctgggtatagtggcaggcatctgtagtcctagctactcagtaggctaaggtgggaggactgcttgagccagggagatcgagattgcagtgagtcatga-tc-tcgccactgcactccagcctgggcaacagagcaagaccctgtctca >AA507925:1-457 (-) gagttcgagaccaagcctgggcaacatgccaaaaacccatctctaccaaaaatacaagaattggccgggtgtggt-gcatgcgcctgtaatcccagctactagggaggcagaggttgcagtgaagattgcgccactgcacttcagcctgggcaataaagtgcgactcaaaaaaaggtttagtccacgatgcggtcg-tcacgcctgtggtcccaacactttgggaggctgaggcggggggatcttttgagcccaggagtttgagaccaccctggacaacatagcaggaccctgtctatgcaaaaaaattggctgggtatggtggcgggcgtctgtggtcctagctactcggtaggctggggtgggaggactgcttgggccagggaggtcgagattgcagtgagtcatgaatcatcgccactgcgctccagcctgggcaacagagcaagaccctgtctca End editing Edited EST: AI922326, type: ag Aligns to: chr12:120927569-120928041 (--) All mismatches: ag (55), ag (59), ag (68), ag (79), ag (80), ag (121), ag (147), ag (153), ag (176), ag (177), ag (210), ag (225), Editing mismatches: 12, all mismatches: 12, alignment length: 473, cluster length: 171, total number of As: 44 Locations in RNA: 55 59 68 79 80 121 147 153 176 177 210 225 Locations in genome: 120927623 120927627 120927636 120927647 120927648 120927689 120927715 120927721 120927744 120927745 120927778 120927793 Upstream nucleotide (in genome): g c c a g t t a a a c c Upstream nucleotide summary: a: 4, c: 4, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): g g g c a g g a c a g g Downstream nucleotide summary: a: 3, c: 2, g: 7, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 0, at: 0, ca: 0, cc: 0, cg: 4, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr12:120927569-120928041 (-) tcatttatgactctggggagatttctgagcgagagctaggtgtcaggccctgttccaggtgctggagatgcacaagagaacaaaataggcaaagtttcctttttatggaacttatagcaggagaataaagataaaaacaagcaaaaatatttatctctgataagggcaatggataaaaataaagtagaataggccaggcacggtggcttacgcctgtaatcctagcactttgggaggccaaggcgggcagattgcctgagctcaggagttcgggaccagcctgggcaacacggtgaaaccccgtctctactaaaatacaaaaaattagctgggcgtggcagcgtgcacctgtagtcccagctacttgggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagctgagatcgcgccactgcactccagtctgggtgacagagagagactccacctc >AI922326:1-473 (-) tcatttatgactctggggagatttctgagcgagagctaggtgtcaggccctgttccaggtgctggagatgcacaagagaacaaaataggcaaagtttcctttttatggaacttatagcaggagaataaagataaaaacaagcaaaaatatttatctctgataagggcaatggataaaaataaagtagaataggccaggcacggtggcttacgcctgtaatcctagcactttgggaggccaaggcgggcggattgcctgagctcgggagttcgggaccagcctgggcaacacggtgaggccccgtctctactaaaatacaagaaattggctgggcgtggcagcgtgcacctgtggtcccagctacttgggaggctgaggcaggagaattgcttgggcctgggaggcggaggttgcggtgggctgagatcgcgccactgcactccagtctgggtgacagagagagactccacctc End editing Edited EST: DB309611, type: ag Aligns to: chr13:95345672-95346230 (--) All mismatches: ag (67), ag (78), ag (90), ag (93), ag (110), ag (120), ag (122), ag (152), ag (157), ag (158), ag (161), ag (164), ag (175), ag (186), ag (195), ag (200), ag (201), ag (209), Editing mismatches: 18, all mismatches: 18, alignment length: 559, cluster length: 143, total number of As: 43 Locations in RNA: 67 78 90 93 110 120 122 152 157 158 161 164 175 186 195 200 201 209 Locations in genome: 95345738 95345749 95345761 95345764 95345781 95345791 95345793 95345823 95345828 95345829 95345832 95345835 95345846 95345857 95345866 95345871 95345872 95345880 Upstream nucleotide (in genome): c a g c t t t a a a t t a c c a c c Upstream nucleotide summary: a: 6, c: 6, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g c g g c g t a t a a c c a g g a g Downstream nucleotide summary: a: 5, c: 4, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 1, at: 1, ca: 2, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 1, tt: 1, other: 0 >chr13:95345672-95346230 (-) tccagaactgtgaggaaataaatttctactgtttaagtcacccagtttgtgaaattttgttataatagcccaagctgactaatacaataaccttaattgtacctgcaaaatcccttttgccatatgctataacataatctcaggagtgatatgataattcacagatttcacccatagtcgaggggaggagattatagaagggcagtatcattgggagttatgtcagaattctgcttaccacaataatctagtctcatggctttaaaaatcatcttcatgatgaggcgaggtggctcacatctgtaatcccagccctttgggaggccgaggtgggcagatcacttgaggtcagaagttcaagaccagcctggccaacatggtgaaactctgtctctactaaaaatacaaaaattaggtgggcatggtggtgcatgcctatagtcccagctactcgggaggctgaggcaggagaaccgcttgaacccaggaggcagaggttgcagtgagctgagatggtgccactgcactccagcctggcaatagagtgagactccatttc >DB309611:1-559 (-) tccagaactgtgaggaaataaatttctnctgtttaagtcacccagtttgtgaaattttgttataatagcccaagctgactaatacaataaccttaattgtacctgcaaaatcccttttgccatatgctataacataatctcaggagtgatatgataattcacagatttcacccatagtcgaggggaggagattatagaagggcagtatcattgggagttatgtcagaattctgcttaccacaataatctagtctcatggctttaaaaatcatcttcatgatgaggcgaggtggctcacatctgtaatcccagccctttgggaggccgaggtgggcagatcacttgaggtcggaagttcgggaccggcctggccgacatggtgaagctctgtctctgctgaaggtacagaaattaggtgggcatggtggtgcatgcctgtggtcccagctgctcgggaggctgaggcgggggaaccgcttgagcccaggaggcggaggttgcagtgagctgagatggtgccactgcactccagcctggcaatagagtgagactccatttc End editing Edited EST: AA598730, type: ag Aligns to: chr13:100567608-100567880 (--) All mismatches: ag (58), ag (75), ag (87), ag (95), cg (109), ag (127), ag (128), ag (154), ag (157), ag (166), ag (167), ag (169), ag (172), ag (203), ag (227), ag (236), ag (268), Editing mismatches: 16, all mismatches: 17, alignment length: 272, cluster length: 212, total number of As: 56 Locations in RNA: 58 75 87 95 127 128 154 157 166 167 169 172 203 227 236 268 Locations in genome: 100567665 100567682 100567694 100567702 100567734 100567735 100567761 100567764 100567773 100567774 100567776 100567779 100567810 100567834 100567843 100567876 Upstream nucleotide (in genome): c c g a a t t a a a t t c c c c Upstream nucleotide summary: a: 5, c: 6, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): a g a t t a g t a a a c g c g c Downstream nucleotide summary: a: 6, c: 3, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 3, ca: 1, cc: 2, cg: 3, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr13:100567608-100567880 (-) tcacacctgtaatcccagcactttgggacgccaaggcaggcagatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggcgtggtggtgcacgcctgtaatcccagctacttgggagcctgtggcgggagaatcgcttgaactcggaaggcagaggttgcagggagccaagattgcaccattgtactccagcctaggggtcaagagagaaactctgtctcaaaaaa >AA598730:1-272 (-) tcacgcctgtaatcccagcactttgggac-ccaaggcgggcagatcgcctgaggtcaggagtttgagaccggcctggccaacatggtgaaaccccatctctgctgaggatacaaaagttggctgggcgtggtggtgcacgcctgtggtcccagctacttgggaggctgtggcgggagagtcgcttggactcggaaggcggaggttgcagggagccgagattgcaccattgtactccagcctaggggtcaagagagaaactctgtctcaaaaaa End editing Edited EST: DB344797, type: ag Aligns to: chr14:20862656-20863217 (--) All mismatches: ag (12), ag (80), ag (99), ag (100), ag (112), ag (121), ag (122), ag (148), ag (152), ag (157), ag (160), ag (161), ag (166), ag (202), ag (211), ag (262), ag (263), ag (270), Editing mismatches: 18, all mismatches: 18, alignment length: 562, cluster length: 259, total number of As: 67 Locations in RNA: 12 80 99 100 112 121 122 148 152 157 160 161 166 202 211 262 263 270 Locations in genome: 20862667 20862735 20862754 20862755 20862767 20862776 20862777 20862803 20862807 20862812 20862815 20862816 20862821 20862857 20862866 20862917 20862918 20862925 Upstream nucleotide (in genome): g a a t t a t t a t a a t g c a g a Upstream nucleotide summary: a: 8, c: 1, g: 3, t: 6, other: 0 Downstream nucleotide (in genome): g c g a c t a g a c a a c g g c a t Downstream nucleotide summary: a: 6, c: 5, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 1, at: 2, ca: 0, cc: 0, cg: 1, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 2, tc: 3, tg: 1, tt: 0, other: 0 >chr14:20862656-20863217 (-) cattcatcttttttgtttttgttgtgtgtgtgtgtattttgaaatacacacaaagatagttaccatcagcaggctcaaagacagatgtaccatctgttttgtaggcttgatgaagtctcagctgtctttttaagtggttcatcagtatcttacacttatttttactcaaaacaaacacaggactcacttaactttctagagggctcagtaactaggaatctcctgaatcagtagctgaacagagggccatttaagaatcaagcctggctgggtgtggtggctcacgcctgtaatcccagaactttgggaggccgaggcaggtggatcacgaggcaggtggatcatgaggtcaggagtttgagactagcctggccaacatggtgaaaccccctgtctactaaaaatacaaaaattagccgggtgtggtggtgggtgcctgtaatcccagctacttgggagactaaggcaggagaatcacttgaacccgggaggcggaggttgctgtgagctgagatcgcgccattgcactccagcctgggcaacaagagtgagactctgtctc >DB344797:1-562 (-) cattcatcttttttgtttttgttgtgtgtgtgtgtattttgaaatacacacaaagatagttaccatcagcaggctcaaagacagatgtaccatctgttttgtaggcttgatgaagtctcagctgtctttttaagtggttcatcagtatcttacacttatttttactcaaaacaaacacaggactcacttaactttctagagggctcagtaactaggaatctcctgaatcagtagctgaacagagggccatttaagaatcaagcctggctgggtgtggtggctcacgcctgtagtcccagggctttgggaggccgaggcaggtggatcacgaggcaggtggatcatgaggtcgggagtttgggactagcctggccaacatggtgaaaccccctgtctgctaaggatgcaaagattggccgggtgtggtggtgggtgcctgtggtcccagctgcttgggagactggggcaggagaatcacttgagcccgggaggcggaggttgctgtgagctgagatcgcgccattgcactccagcctgggcaacaagagtgggactctgtctc End editing Edited EST: H18959, type: ag Aligns to: chr15:52961111-52961400 (--) All mismatches: ag (53), ag (65), gc (86), ag (133), ag (142), ag (153), ag (169), ag (184), ag (197), ag (202), ag (237), ag (242), ag (245), Editing mismatches: 12, all mismatches: 13, alignment length: 291, cluster length: 193, total number of As: 60 Locations in RNA: 53 65 133 142 153 169 184 197 202 237 242 245 Locations in genome: 52961163 52961175 52961243 52961252 52961263 52961279 52961294 52961307 52961312 52961347 52961352 52961355 Upstream nucleotide (in genome): c g t a c t a c a c a c Upstream nucleotide summary: a: 4, c: 5, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): c g c t g g a t c g g c Downstream nucleotide summary: a: 1, c: 4, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 1, ca: 0, cc: 2, cg: 2, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr15:52961111-52961400 (-) cacg-cctgtaatcccagcactttggaaggctgaggtgggcggatcacaagatcaggagatcgagaccatcctggctaacaatggtgaaaccccatctctactaaaaaaatacaaaaaaattagctgggtgtggtggcaggcgcctgtaatctcagctactctaggactgaggcaggacagtgaggcaggagaatggcgtgaaccggggaggcggagcttgcagtgagccgagattgcaccactgcactcaagcctgggtgacagagtgagtctccgtctcaaaaaaaaaa >H18959:1-291 (-) cacgncctgtaatcccagcactttggaaggctgaggtgggcggatcgcaggatcgggagatcgagaccatcctggctaacaatggtgaagccccgtctctactaaaagaatacaaaaaaattggctgggtntggtggcgggcgcctgtagtctcagctgctctaggactgaggcaggacagtgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgggccgagattgcgccactgcactcaagcctgggtgacagagtgagtctccgtctcaaaaaaaaaa End editing Edited EST: H95389, type: ag Aligns to: chr15:93322249-93322509 (--) All mismatches: ag (58), ag (61), ag (69), ag (101), ag (110), ag (111), ag (145), ag (150), ag (165), ag (175), ag (203), ag (218), ag (244), ct (250), Editing mismatches: 13, all mismatches: 14, alignment length: 261, cluster length: 187, total number of As: 54 Locations in RNA: 58 61 69 101 110 111 145 150 165 175 203 218 244 Locations in genome: 93322306 93322309 93322317 93322349 93322358 93322359 93322393 93322398 93322413 93322423 93322451 93322466 93322492 Upstream nucleotide (in genome): c a a t a t t a a a a c a Upstream nucleotide summary: a: 8, c: 2, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g g c c t a c a c c g g t Downstream nucleotide summary: a: 2, c: 5, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 2, at: 2, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 0, tt: 0, other: 0 >chr15:93322249-93322509 (-) ggtggctcacacctgtaatcccagcactttgggaggccaaggcaggcagatcacttgaagtcgggagtttgagaccagcctgaccaacatggagaaacctcatctctaccaaaaatacaaaattagcggggtgtggtggtgcatgcctgtaatctcagctactcaggaggctgaggcaggaggatcacttgaacttgggaagcagaggttgcagtgagccgaga-tcgtgccattgcaccattgcactctagcctgggcaac >H95389:1-261 (-) ggtggctcacatctgtagtcccagcactttgggaggccaaggcgggcagatcacttgaggtcgggagtttgagaccagcctgaccagcatggagaagcctcatctctaccagaaatgcaaaattagcggggtgtggtggtgcatgcctgtggtctcagctgctcaggaggctgaggcaggaggatcacttgagcttgggaggcggaggttgcagtgagccgagaatc-tgccattgcaccattgcactctagcctgggcaac End editing Edited EST: DB344282, type: ag Aligns to: chr15:42462969-42463508 (--) All mismatches: ag (41), ag (46), ag (47), ag (55), ag (64), ag (73), ag (82), ag (90), ag (109), ag (114), ag (126), ag (168), ag (173), ac (380), Editing mismatches: 13, all mismatches: 14, alignment length: 541, cluster length: 132, total number of As: 44 Locations in RNA: 41 46 47 55 64 73 82 90 109 114 126 168 173 Locations in genome: 42463009 42463014 42463015 42463023 42463032 42463041 42463050 42463058 42463076 42463081 42463093 42463135 42463140 Upstream nucleotide (in genome): t a c c c c a t c t t a t Upstream nucleotide summary: a: 3, c: 5, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): c g a g c g g c t g g c g Downstream nucleotide summary: a: 1, c: 4, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 0, ca: 1, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 3, tt: 0, other: 0 >chr15:42462969-42463508 (-) ttccatctcactttcagtttccaaatctcatatcctgtttctgggtggaaccagattttcacttagaaccctgactgctagggagtttgataaaagtagttttcagttttatagcccctgtggactataaaggagtagaaatggatgggaagtgccaattgaccatacaccatagtgttccacagcattgatgcactgtaaattatataaccagcccccagtcagtgaggggatatgttggctacttacagcattttgctgttacaatctgggagtggccaggtacagtggctcatgcctataatcccagcattttgggagaccaaagagaagaggattgcttgagcccaggagttcaagaccagcctaggcaacatagtgagaccttgtctttacaaaaaatttaaaaataattagctggcaggatagtaca-tgcctgtagtcccagctacttgggaaggtgaggcaggaggatcacttgagccaggaggtcaagactacaagaagccaagattgtgccactgagcaaaaccctgtctc >DB344282:1-541 (-) ttccatctcactttcagtttccaaatctcatatcctgtttctgggtggaaccagattttcacttagaaccctgactgntagggagtttgataaaagtagttttcagttttatagcccctgtggactataaaggagtagaaatggatgggaagtgccaattgcccatacaccatagtgttccacagcattgatgcactgtaaattatataaccagcccccagtcagtgaggggatatgttggctacttacagcattttgctgttacaatctgggagtggccaggtacagtggctcatgcctataatcccagcattttgggagaccaaanagaanaggattgcttgagcccaggagttcaagaccagcctgggcagcatagtgagaccttgtctttacaaaaaatttaaaaataattggctggcaggatggtacggtgcctgtagtcccagctgcttgggagggtgaggcgggaggatcgcttgagccgggaggtcgggactgcaagaagccaagattgtgccactgagcaaaaccctgtctc End editing Edited EST: AA643406, type: ag Aligns to: chr15:44070177-44070459 (--) All mismatches: ag (14), ag (56), ag (80), ag (92), ag (122), ag (148), ag (164), ag (178), ag (180), ag (202), ag (203), ag (204), Editing mismatches: 12, all mismatches: 12, alignment length: 281, cluster length: 191, total number of As: 50 Locations in RNA: 14 56 80 92 122 148 164 178 180 202 203 204 Locations in genome: 44070192 44070234 44070258 44070270 44070300 44070326 44070342 44070356 44070358 44070380 44070381 44070382 Upstream nucleotide (in genome): c g a g t t t a g a a c Upstream nucleotide summary: a: 4, c: 2, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): a g c g g g a c a a a a Downstream nucleotide summary: a: 6, c: 2, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 0, at: 0, ca: 2, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 0 >chr15:44070177-44070459 (-) gccgggcgcggtggctcatccctgtaatcccagcactttgggaagccgaggcgggtggatcacgaggtcaggagatcaaaaccatcctggctaacacggtgaaaccccatctctactaaaaatacaaaacattagccaggcgtggtggtgggtgcccgtagtcccagttactcgggaggctgaggcaggagaatggcgtgaacccaggaggcggggcttgcagtgagcggagat-cgtgccactgcactccagcctgggcgacagagcaagacttcgtctcaaa >AA643406:1-281 (-) gccgggcgcggtggctcatccctgtaatcccagcactttgggaagccgaggcgggtggatcacgaggtcaggagatcgggaccatcctggctaacacggtggagccccatctctactgaaaatacaaaacattggccaggcgtggtggtgggtgcccgtggtcccagttactcgggaggctgaggcaggggaatggcgtgagcccaggaggcggggcttgcagtgggcggagattcg-gccactgcactccagcctgggcgacagagcgag-ct-cgtctcaaa End editing Edited EST: DB350355, type: ag Aligns to: chr16:3132770-3133317 (--) All mismatches: ag (69), ag (81), ag (121), ag (122), ag (140), ag (148), ag (162), ag (171), ag (176), ag (187), ag (201), ag (202), ag (207), ag (255), ga (504), Editing mismatches: 14, all mismatches: 15, alignment length: 548, cluster length: 187, total number of As: 51 Locations in RNA: 69 81 121 122 140 148 162 171 176 187 201 202 207 255 Locations in genome: 3132838 3132850 3132890 3132891 3132909 3132917 3132931 3132940 3132945 3132956 3132970 3132971 3132976 3133024 Upstream nucleotide (in genome): c g a t c t t c a c a t g a Upstream nucleotide summary: a: 4, c: 4, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): g a t a t g a t c a g a g t Downstream nucleotide summary: a: 5, c: 1, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 2, ca: 1, cc: 0, cg: 1, ct: 2, ga: 1, gc: 0, gg: 1, gt: 0, ta: 3, tc: 0, tg: 1, tt: 0, other: 0 >chr16:3132770-3133317 (-) atgttggaatgagtttagactttgggggactgttgggaaggcatgattgagttttgaaatgtgagaaggacatgaggtttgggagggtccaggggcagaatgaggtggttttctctgtgtcctcacccaaatcatctcaaactgtaatccccacatgtcgagggaggggcccggttggaggtgactggatcatgggggcagtttcccccatgcgcttctggtgtgagtgagttctcacaagatctgatggtttaaaagtgtttggcagctgggtgtggtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcggatcacctgaggtcaggagtttaagaccagcctggccaacatggtgaaaccccatctgtactaaaaacacaaaattagcctggcatggtggtgcatgcctgtaatctcagctactcagcaggctgaggcaggagaatcgcttgaaccagggaggcagaagttgcagtgagccgagatcaccccattacactccagcctgggcgacaaaagcacaactccatctc >DB350355:1-548 (-) atgttggaatgagtttagactttgggggactgttgggaaggcataattgagttttgaaatgtgagaagnacatgaggtttgggagggtccaggggcagaatgaggtggttttctctgtgtcctcacccaaatcatctcaaactgtaatccccacatgtcgagggaggggcccggttggaggtgactggatcatgggggcagtttcccccatgcgcttctggtgtgagtgagttctcacaagatctgatggtttaaaagtgtttggcagctgggtgtggtggctcatgcctgtagtcccagcactttgggaggccgaggtgggcggatcacctgaggtcaggggtttgggaccagcctggccgacatggtgaagccccgtctgtactgaaaacacaaaattggcctggcgtggtggtgcatgcctgtggtctcagctactcagcaggctgaggcaggagaatcgcttggaccagggaggcggaagttgcagtgagccgagatcaccccattacactccagcctgggcgacaaaagcacaactccatctc End editing Edited EST: DB346327, type: ag Aligns to: chr16:29586220-29586526 (--) All mismatches: ag (17), ag (21), ag (37), ag (78), ct (85), ag (110), ag (119), ag (130), ag (133), ag (146), ag (183), ag (185), ag (186), ag (195), ag (254), ag (255), Editing mismatches: 15, all mismatches: 16, alignment length: 307, cluster length: 239, total number of As: 61 Locations in RNA: 17 21 37 78 110 119 130 133 146 183 185 186 195 254 255 Locations in genome: 29586236 29586240 29586256 29586297 29586329 29586338 29586349 29586352 29586365 29586402 29586404 29586405 29586414 29586473 29586474 Upstream nucleotide (in genome): a c t a t a c t t c a c c a t Upstream nucleotide summary: a: 5, c: 5, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): a a t c c t g g g t c a g t a Downstream nucleotide summary: a: 4, c: 3, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 2, ca: 2, cc: 0, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 1, other: 0 >chr16:29586220-29586526 (-) taagctggttaaagaagtgaagaaggggccgggcacgttggctcacgcctgtaattccagcactttgggaggccgaggcgggtggatcccttgaggtcaggagttcgagaccagcctggccaacatggcgaaaccctgtctctactaaaaatacaaaaattagccgggtgtggtagcaggggcctgtaatctcagctacttgggaggctgaggcaggagaatcgcttgaacctggaggtggaggttgcagtgagccagtattgcaccactatactccagcctgggcaacaaagtcagagtctgtctc >DB346327:1-307 (-) taagctggttaaanaagtgaagaaggggccgggcacgttggctcacgcctgtggttccagcactttgggaggccgaggcgggtggatcccttgaggtcaggagttcgagaccggcctggccggcgtggcgaaaccctgtctctactaaaaatacaaaaattggccgggtgtggtggcgggggcctgtagtctcagctgcttgggaggctgaggcaggagaattgcttgagcctggaggtggaggttgcagtgagccagtattgcaccactgtactccagcctgggcgacagagtcagagtctgtctc End editing Edited EST: DB333060, type: ag Aligns to: chr16:4570133-4570683 (--) All mismatches: ag (46), ag (77), ag (92), ag (105), ag (162), ag (167), ag (168), ag (169), ag (200), ag (209), ag (214), ag (236), ag (251), Editing mismatches: 13, all mismatches: 13, alignment length: 551, cluster length: 206, total number of As: 58 Locations in RNA: 46 77 92 105 162 167 168 169 200 209 214 236 251 Locations in genome: 4570178 4570209 4570224 4570237 4570294 4570299 4570300 4570301 4570332 4570341 4570346 4570368 4570383 Upstream nucleotide (in genome): g a c c c a a g a g c c c Upstream nucleotide summary: a: 4, c: 6, g: 3, t: 0, other: 0 Downstream nucleotide (in genome): t c g g t c a a g c g c c Downstream nucleotide summary: a: 2, c: 5, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 0, ca: 0, cc: 2, cg: 3, ct: 1, ga: 1, gc: 1, gg: 0, gt: 1, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr16:4570133-4570683 (-) caatatttagtgactttaatgacattggtagtgataccagcaatgtgatttaaaaaaatatatattgttcaatgagatgtgtcaacattggtagatctgcattacaggaacccgtattttcaggtgacccacacatgatgttaagaaatcatgtctatgtaaaagacccattccaaatgcaaggtacaccaatgacttctaatgtaacacattagaaaaaaaccattgttaaggcttccaattcctgtggcaactaacccttaagaaactaccacttgtcggtcaagtgcggtggctcacacctgtaatcccagcactttgggaggccgaggcgggcagatgacgaggtcaagagattgagaccatcctggtcaacatggtgaaaccccatctctactaaaaatacaaaaattagatgggtggcatgcctgtagtcccagctcctcaggaggctgaggcaggagaatcgcttgaacccgggaggcggaggctgcagtgagccaagattgcgccactgcactccagcctggtgatagagcgagactctgtct >DB333060:1-551 (-) caatatttagtgnctttaatgacattggtagtgataccagcaatgtgatttaaaaaaatatatattgttcaatgagatgtgtcaacattggtagatctgcattacaggaacccgtattttcaggtgacccacacatgatgttaagaaatcatgtctatgtaaaagacccattccaaatgcaaggtacaccaatgacttctaatgtaacacattagaaaaaaaccattgttaaggcttccaattcctgtggcaactaacccttaagaaactaccacttgtcggtcaagtgcggtggctcacgcctgtaatcccagcgctttgggaggccgaggcgggcggatggcgaggtcaggagattgagaccatcctggtcaacatggtggggccccgtctctactaaaaatacaaaaattagatgggtggcatgcctgtagtcccagctcctcgggaggctgaggcgggagaatcgcttgagcccgggaggcggaggctgcagtgagccaaggttgcgccactgcactccagcctggtgatagagcgagactctgtct End editing Edited EST: DB300347, type: ag Aligns to: chr16:49226584-49227083 (--) All mismatches: ag (43), ag (46), ag (115), ag (120), ag (121), ag (131), tc (140), ag (143), ag (154), ag (200), ag (211), ag (222), ag (224), ag (228), Editing mismatches: 13, all mismatches: 14, alignment length: 500, cluster length: 186, total number of As: 57 Locations in RNA: 43 46 115 120 121 131 143 154 200 211 222 224 228 Locations in genome: 49226626 49226629 49226698 49226703 49226704 49226714 49226726 49226737 49226783 49226794 49226805 49226807 49226811 Upstream nucleotide (in genome): c t c a t c c a g c g c c Upstream nucleotide summary: a: 2, c: 7, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): c g g t a g g a c g t g g Downstream nucleotide summary: a: 2, c: 2, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 1, ca: 0, cc: 1, cg: 6, ct: 0, ga: 0, gc: 1, gg: 0, gt: 1, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr16:49226584-49227083 (-) tgtttatcagcaagcagatcaagaatcaggcaagacagtagcccagaatccccacaggctcctttccagtcactaagccctcctctgagactaaccatattattaacttgtaatgggatagaataattgcccttgtttttatactttatagacatggaatcatagagtatgtactcttttgtttctttcactcaatattatgtttgtaagattcatccaggccaggcacggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggcagatcacgaggtcaggagatcgagacaatcctggctaacatggtgaaaccccatctctactaaaaatacaaaaaattagccaggtgtggtggcaggcgcctgtaatcccagctacttgggaggctgaggtaggagaatggagtgaactggggaggcggagcttgcagtgagcagagatagcaccactgcattccagcctgggtgacagagcaagactctgtctc >DB300347:1-500 (-) tgtttatcagcaagcagatcaagaatcaggcaagncagtagcccagaatccccacaggctcctttccagtcactaagccctcctctgagactaaccatattattaacttgtaatgggatagaataattgcccttgtttttatactttatagacatggaatcatagagtatgtactcttttgtttctttcactcaatattatgtttgtaagattcatccaggccaggcacggtggctcatgcctgtaatcccagcactttgggaggccgaggcgggcgggtcacgaggtcgggagatcgaggcaatcctggctaacatggtgaaaccccatctctactaaaaatacagaaaattagccgggcgtggtggcgggcgcctgtggtcccggctacttgggaggctgaggtaggagaatggagtgaactggggaggcggagcttgcagtgagcagagatggcgccactgcattccagcctgggtgacagagcaagactctgtctc End editing Edited EST: DW411025, type: ag Aligns to: chr16:56478811-56479135 (--) All mismatches: ga (7), ag (19), ag (35), ag (47), ag (48), ag (75), ag (81), ag (90), ag (120), ag (124), ag (126), ag (129), ag (168), ag (169), ag (170), ag (180), ag (205), ag (209), ag (235), ag (270), ag (285), Editing mismatches: 20, all mismatches: 21, alignment length: 326, cluster length: 267, total number of As: 52 Locations in RNA: 19 35 47 48 75 81 90 120 124 126 129 168 169 170 180 205 209 235 270 285 Locations in genome: 56478823 56478839 56478851 56478852 56478879 56478885 56478894 56478924 56478928 56478930 56478933 56478972 56478973 56478974 56478984 56479009 56479013 56479039 56479074 56479089 Upstream nucleotide (in genome): c t a a c t t c g t t a a t t g a c c a Upstream nucleotide summary: a: 6, c: 5, g: 2, t: 7, other: 0 Downstream nucleotide (in genome): c c g a g a g g g g g g a a g t g c c g Downstream nucleotide summary: a: 4, c: 4, g: 11, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 4, at: 0, ca: 0, cc: 3, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 1, ta: 2, tc: 1, tg: 4, tt: 0, other: 0 >chr16:56478811-56479135 (-) ttgaaatgctccaatgagcatttcctttttttttttcttgagacgaagtctctctcttgtcacccaggctggagtgcaatggtgcaatcttgtctcactgtcacctccgcctcccgggtttaagcgattctccggcctcagcctcccgagtagatgggattaaaggtgcctgcctccacgcccagctaatttttgtatttttagtagagacagggtttcaccatgttgaccaggctggtctagaactcctaacctcaggtgatctgcctgtcttggccttccaaagtgctgggattacaggcatgagccaccacgcccggcc-tga >DW411025:6-331 (-) ttgaaatgctccaatgagcatttcctttttttttttcttgagacgaggtctctctcttgtcgcccaggctggagtgcaatggtgcaatcttgtctcgctgtcacctccgcctcccgggtttaggcggttctccggcctcagcctcccgagtggatgggattgggggtgcctgcctccacgcccagctaatttttgtatttttggtggggacggggtttcaccatgttgaccaggctggtctggaactcctgacctcgggtgatctgcctgtcttggccttccagggtgctgggattgcaggcatgagccaccgcgcccggccgtaa End editing Edited EST: BE326775, type: ag Aligns to: chr16:933780-934165 (--) All mismatches: ag (145), ag (147), ga (153), ag (159), ag (160), ag (184), ag (217), ag (226), ag (227), ag (235), ag (242), ag (243), ag (256), ag (257), ag (258), ag (259), ag (269), ag (270), ag (285), ag (287), ag (288), ag (289), ag (297), ag (300), ag (305), ag (308), ag (320), ag (333), ag (334), ag (346), ag (348), ag (352), ag (358), ag (362), ag (363), ag (368), ag (369), ag (370), ag (372), ag (377), Editing mismatches: 39, all mismatches: 40, alignment length: 386, cluster length: 233, total number of As: 103 Locations in RNA: 145 147 159 160 184 217 226 227 235 242 243 256 257 258 259 269 270 285 287 288 289 297 300 305 308 320 333 334 346 348 352 358 362 363 368 369 370 372 377 Locations in genome: 933923 933925 933937 933938 933962 933995 934004 934005 934013 934020 934021 934034 934035 934036 934037 934047 934048 934063 934065 934066 934067 934075 934078 934083 934086 934098 934111 934112 934124 934126 934130 934136 934140 934141 934146 934147 934148 934150 934155 Upstream nucleotide (in genome): a a a t t t a t t a a a a a c a t c a a c a c g c c a t t a a c a g a a c g c Upstream nucleotide summary: a: 19, c: 9, g: 3, t: 8, other: 0 Downstream nucleotide (in genome): g a g a g g g a g a a g a a a t a c c a a g g g g c a a t t a g t a g a a c c Downstream nucleotide summary: a: 17, c: 5, g: 13, t: 4, other: 0 Dinucleotide summary: aa: 9, ac: 1, ag: 6, at: 3, ca: 3, cc: 3, cg: 3, ct: 0, ga: 1, gc: 1, gg: 1, gt: 0, ta: 4, tc: 0, tg: 3, tt: 1, other: 0 >chr16:933780-934165 (-) ccaccttcacaccagacaaagcagaattcagagcaaagaatatgatcaggagtaaagaggccatttcacagtgtttatcaggaggtcagaagactctcaaacacgtatgcgcctgataatagagcttcaaaagacatgaagcaaaaatggatagaactgtaagcagacatagacaaatccataaagttggagatttcaataatagataaagcaggtagatagaaaataaggaaggatgtaaaagagctgaaaaacactactaaccaacatgatctaattaacatttataggcagtttgtgacaatttgattatttgtcaatcaaactacaatcaaagtgatcaatagtgtcatattgtcatgcagtaaaatgtgaccatttggtta >BE326775:2-387 (-) ccaccttcacgccaggcggggcagggttcggagcagagagtgtgatcaggagtggagaggccatttcgcagtgtttatcggggggtcggaggactctcgggcgcgtatgcgcctgatggtagagcttcgggggacatgaagcaaggatggatggaactgtgggcagacatggacaaatccataaagttggagatttcaataatggataaagcaggtagatagaaaatggggaagaatgtagaggagctgaaaaacactactaaccaacatgatctaattaacatttataggcagtttgtgacaatttgattatttgtcaatcaaactacaatcaaagtgatcaatagtgtcatattgtcatgcagtaaaatgtgaccatttggtta End editing Edited EST: AI247303, type: ag Aligns to: chr16:11931211-11931510 (--) All mismatches: ag (41), ag (44), ag (46), ag (104), ag (124), ag (127), ag (131), ag (136), ag (137), ag (155), ag (193), ag (202), ag (233), ag (244), ag (262), ag (271), ag (272), Editing mismatches: 17, all mismatches: 17, alignment length: 301, cluster length: 231, total number of As: 66 Locations in RNA: 41 44 46 104 124 127 131 136 137 155 193 202 233 244 262 271 272 Locations in genome: 11931250 11931253 11931255 11931313 11931333 11931336 11931340 11931345 11931346 11931364 11931402 11931411 11931442 11931453 11931471 11931479 11931480 Upstream nucleotide (in genome): c g c a t t c a t c a a c c c a t Upstream nucleotide summary: a: 5, c: 7, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): a g g t g c g t a t a c a g c t a Downstream nucleotide summary: a: 5, c: 3, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 3, ca: 2, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr16:11931211-11931510 (-) agtagtccaggggcggtggctcacgcctgtaa-tcccagcactttgggaggccgaggcaggcggatcacaaggtcaacgagatcgagaccatcctggccaacatggtgaaaccctgtctgtaccaaaaatacaaaaattaattgggcatggtggtggacacctgtaatcccagctactagggaggctgaggcaggagaattgcttgaacctgggaggcggaggttgcagtgagccactgcactccagcctgatgacagagcaagactcagtctcaaaaataaataaaaataataaaacctc >AI247303:2-302 (-) agtagtccaggggcggtggctcacgcctgtggttcccagcgctttgggaggccgaggcgggcggatcacgaggtcaacgagatcgagaccatcctggccagcatggtgagaccctgtctgtaccaaaaatacaaaaattaattgggcgtggtggtggacacctgtggtcccggctgctggggaggctgaggcaggagagttgcttgaacctgggaggcggaggttgcagtgagccactgcactccagcctgatgacggggcgagactcagtctcaaaaataaataaaaataataaaacctc End editing Edited EST: CR742263, type: ag Aligns to: chr17:48783027-48783359 (--) All mismatches: ag (63), ag (64), ag (71), ag (89), ag (110), ag (128), ag (133), ag (150), ag (156), ag (160), ag (165), ag (169), ag (173), ag (175), ag (178), ag (189), ag (199), ag (200), ag (212), ag (223), ag (231), ag (236), ag (266), Editing mismatches: 23, all mismatches: 23, alignment length: 333, cluster length: 204, total number of As: 56 Locations in RNA: 63 64 71 89 110 128 133 150 156 160 165 169 173 175 178 189 199 200 212 223 231 236 266 Locations in genome: 48783089 48783090 48783097 48783115 48783136 48783154 48783159 48783176 48783182 48783186 48783191 48783195 48783199 48783201 48783204 48783215 48783225 48783226 48783238 48783249 48783257 48783262 48783292 Upstream nucleotide (in genome): a c a c c c c t c t a t a t t a a c g c c c a Upstream nucleotide summary: a: 7, c: 10, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g a t g g g t g g g a c g a c c c a c g c g t Downstream nucleotide summary: a: 4, c: 6, g: 10, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 2, at: 2, ca: 2, cc: 1, cg: 6, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr17:48783027-48783359 (-) aaccatggtttccagactgcctcaaaagtctacctacctggacctggcgcggtggctgacgcctgtaatctcagcactttgggaggccaaggtgggcagatcacgatgtcaggagttcgagaccattctggccaacatggtgaaaccctgtctctactaaagatacaaaaattagccaggggtagcggtgtgtgcctgtcatcccagctacttgggatgctgcagcaggagaatcacttgaaccagggagttggaggttgaaatgagccaagatcacaccactgcactccaggctggtggcagagcgagactctgtctcaaaaaaaaaaaaaa >CR742263:1-333 (-) aaccatggtttccagactgcctcaaaagtntacctacctggacctggcncggtggctgacgcctgtagtntcagcnctttgggaggccaaggtgggcggatcgcgatgtcgggagttcgaggccattntggccggcatggtgaagccctgtctntgntgaggatgcaagaattggccgggggtggcggtgtgtgcctgtcgtcccggctacttgggatgctgcggcaggagaatcncttgaaccggggagttggaggttgaagtgagccgggatcncaccnctgcactccaggctggtggcagagcgagactctgtntcaaaaaaaaaaaaaa End editing Edited EST: DB298070, type: ag Aligns to: chr17:41127706-41128219 (--) All mismatches: ag (24), ag (41), ag (46), ag (51), ag (56), ag (74), ag (78), ag (85), ag (94), ag (95), ag (121), ag (126), ag (127), ag (140), ag (153), ag (162), ag (171), ag (182), ag (183), ag (184), ag (202), ag (243), ag (244), ag (254), gc (373), ag (380), ag (391), ag (400), ga (411), ag (423), ag (433), ag (469), ag (472), ag (484), ag (489), ag (491), ag (492), Editing mismatches: 35, all mismatches: 37, alignment length: 514, cluster length: 469, total number of As: 131 Locations in RNA: 24 41 46 51 56 74 78 85 94 95 121 126 127 140 153 162 171 182 183 184 202 243 244 254 380 391 400 423 433 469 472 484 489 491 492 Locations in genome: 41127729 41127746 41127751 41127756 41127761 41127779 41127783 41127790 41127799 41127800 41127826 41127831 41127832 41127845 41127858 41127867 41127876 41127887 41127888 41127889 41127907 41127948 41127949 41127959 41128085 41128096 41128105 41128128 41128138 41128174 41128177 41128189 41128194 41128196 41128197 Upstream nucleotide (in genome): c c c c g c g a a g c a t t t t t a a g c a g c c a a t t t a c a a c Upstream nucleotide summary: a: 11, c: 11, g: 5, t: 8, other: 0 Downstream nucleotide (in genome): g c c c g g g c t a g t a g g c c c a a g g a g g c t c g c a t c a a Downstream nucleotide summary: a: 8, c: 11, g: 12, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 4, ag: 1, at: 3, ca: 1, cc: 3, cg: 6, ct: 1, ga: 3, gc: 0, gg: 2, gt: 0, ta: 1, tc: 4, tg: 3, tt: 0, other: 0 >chr17:41127706-41128219 (-) agaccagcctggccaacatggcaaaaccccatctctactaaaaatacaaaaaatgagctgggcgtggtggtgcgagcctgtagtgccagctactcgggaggctgaggcgggagaattgcttgaacccgggaggcagaggttgcagtgagccaagagctcaccactgcactcctgcctgtgcaatagagtgagactccatttcaaaaaaaataaataaataaaacggggagccaggttcggtggctcgtgactgtaatcccagcactttggaaggccgaggcaggcagatcacaaggtggggaatttgagaccagcctggccgacgtggtgaaaccccgtctctactaaaaatacgaaagttagcagagcgcggtagcacgtgcctgtaatcccagctgctccggaggctgaggcaggagaattgcttgaacccgggaggcagaggttgcagtcagccgagatcaccccactgcactctagcctggatgacagagtgagactctgtctcagaaag >DB298070:1-514 (-) agaccagcctggccaacatggcggagccccgtctctactaaagatgcaaaaaatgagctgggcgtggtggtgcgagcctgtggtgccanctgctcgggaggctaaggcgggagagttgcttgagcccgggaggcggaggttccagtgagccaagagctcaccactgcactcctgcctgtgcaatagagtgagactccatttcaaaaaaaataaataaataaaacggggagccaggttcggtggctcgtgactgtaatcccggcactttggggggccgaggcaggcagatcacaaggtggggaatttgagaccggcctggccgacgtggtggggccccgtctctgctaaaaatgcgaaagttggcagagcgcggtggcacgtgcctgtggtcccggctgctccggaggctgaggcaggagggttgcttgagcccggggggcggaggttgcagtcagccgggatcgccccgctgcgctctagcctggatgacggagtgagactctgtctcagaaag End editing Edited EST: DB345959, type: ag Aligns to: chr17:18214333-18214873 (--) All mismatches: ag (80), ag (94), ag (121), ag (147), ag (162), ag (177), ag (187), ag (210), ag (254), ag (255), ag (261), ag (263), ag (273), ag (277), ag (364), ag (373), ag (436), ag (440), ag (464), ag (471), ag (479), ag (494), ag (495), ag (508), ag (518), ag (525), Editing mismatches: 26, all mismatches: 26, alignment length: 541, cluster length: 446, total number of As: 127 Locations in RNA: 80 94 121 147 162 177 187 210 254 255 261 263 273 277 364 373 436 440 464 471 479 494 495 508 518 525 Locations in genome: 18214412 18214426 18214453 18214479 18214494 18214509 18214519 18214542 18214586 18214587 18214593 18214595 18214605 18214609 18214696 18214705 18214768 18214772 18214796 18214803 18214811 18214826 18214827 18214840 18214850 18214857 Upstream nucleotide (in genome): g c t t a a a a a t t c c c a c c t c a a a c g c a Upstream nucleotide summary: a: 10, c: 9, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): a g g g a c c g t a c t t g g a g g t a c g a g g g Downstream nucleotide summary: a: 6, c: 4, g: 12, t: 4, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 4, at: 1, ca: 2, cc: 0, cg: 4, ct: 3, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 3, tt: 0, other: 0 >chr17:18214333-18214873 (-) cagttggggaggctcaagcgggcagaccacctgaggtcgtgagttcaagaccagcctggccaacatggcaaaaccccatctctactaaaaatacaaaaattagccaggtgtggtggcggggtcctgtaatcccagctactcacgaggctgaggcaggagaatcgcttcaacccgggaagtggagcttgcagtgagcctagattgcgccattacattacagcctgggcgacagagtgagactccatctcaaaaaaaaattaggccaggcatggtggctcatacctgtaatcccagcactctgggaggctgaggtgggcggatcatgaggtcaagagattgagaccatcctggctaacacggtgaaaccctgtctctactaaaaatacaaaaaattagccgggcatgctggcagacgcctgtagtcccagctactcgggaggctgaggcagcagaatggcatgaacccgggaggtggagcttgcagtgagccgagattgtgccactgcactccagcctgggcaacagagtgagactctgtctc >DB345959:1-541 (-) cagttggggaggctcaggcgggcggaccacctggggtcgtgagttcgggaccagcctggccagcatggcagaaccccgtctctactaaaaatacaaaaattggccgggtgtggtggcggggtcctgtaatcccagctactcacgaggctgaggcaggagaatcgcttcgacccgggaggtggagcttgcagtgagcctagattgcgccattacattacagcctgggcgacagagtgagactccatctcaaaaaaaaattaggccgggcgtggtggctcgtgcctgtggtcccagcactctgggaggctgaggtgggcggatcatgaggtcaggagattgagaccatcctggctagcacggtgaagccctgtctctactagaaatacaaaaaattggccgggcatgctggcagacgcctgtggtcccagctactcgggaggctgaggcggcagaatggcatggacccgggaggtggagcttgcagtgagccgagattgtgccactgcactccagcctgggcaacagagtgagactctgtctc End editing Edited EST: DW418316, type: ag Aligns to: chr17:63029837-63030156 (--) All mismatches: ag (160), ag (161), ag (200), ag (218), ag (231), ag (237), ag (240), ag (246), ag (259), ag (281), ag (326), ag (395), ag (399), ag (401), Editing mismatches: 14, all mismatches: 14, alignment length: 321, cluster length: 242, total number of As: 47 Locations in RNA: 160 161 200 218 231 237 240 246 259 281 326 395 399 401 Locations in genome: 63029888 63029889 63029928 63029946 63029959 63029965 63029968 63029974 63029987 63030009 63030054 63030123 63030127 63030129 Upstream nucleotide (in genome): a a c t c t t t c t g g g g Upstream nucleotide summary: a: 2, c: 3, g: 4, t: 5, other: 0 Downstream nucleotide (in genome): g a a t g g g t g c g g c g Downstream nucleotide summary: a: 2, c: 2, g: 8, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 1, cc: 0, cg: 2, ct: 0, ga: 0, gc: 1, gg: 3, gt: 0, ta: 0, tc: 1, tg: 2, tt: 2, other: 0 >chr17:63029837-63030156 (-) tttttttttttttttttttttttttt-gagacggagtcctgctctgttgcccaggctggagtgtagcagggtgatcttggctcactgcaacctccgcctcctgagttcaagtgattctcctgcctcagcctctcgagtagctgggactacaggcgcccactaccacacccagctaatttttgtatttttagtagagacagggtttcaccatattggccaggctggtctcaaactcctgaccttgtgatccgcccacctcggcctcccaaagtgttgggatcacaggtgtgagccaccaagcccggcctcttttgaaaattt >DW418316:109-429 (-) ttttttttttttttttttttttttttcggggcggggtcctgctctgttgcccaggctggagtgtagcagggtgatcttggctcactgcaacctccgcctcctgggttcaagtgattctcctgcctcagcctctcgagtagctgggactgcaggcgcccactaccacacccggctaatttttgtgtttttggtggagacggggtttcaccatgttggccaggctggtctcgaactcctgaccttgtgatccgcccacctcggcctcccagggtgttgggatcacaggtgtgagccaccaagcccggcctcttttgaaaattt End editing Edited EST: AA515617, type: ag Aligns to: chr17:43230575-43230932 (--) All mismatches: ga (10), ag (35), ga (36), ag (68), ag (71), ag (72), ag (78), ag (82), ag (98), ag (114), ag (117), ag (134), ag (138), ag (143), ag (144), ag (166), ag (170), ag (182), ag (183), ag (233), ag (237), ag (272), ag (279), ag (281), ag (314), ag (315), ag (348), Editing mismatches: 25, all mismatches: 27, alignment length: 357, cluster length: 313, total number of As: 97 Locations in RNA: 35 68 71 72 78 82 98 114 117 134 138 143 144 166 170 182 183 233 237 272 279 281 314 315 348 Locations in genome: 43230602 43230634 43230637 43230638 43230644 43230648 43230664 43230680 43230683 43230700 43230704 43230709 43230710 43230732 43230736 43230748 43230749 43230799 43230803 43230838 43230845 43230847 43230880 43230881 43230914 Upstream nucleotide (in genome): g c a a g c c g c t c a t c t a a c a a t t a a t Upstream nucleotide summary: a: 9, c: 7, g: 3, t: 6, other: 0 Downstream nucleotide (in genome): g c t a g g g g g c g t a g g a a g g c t t a a g Downstream nucleotide summary: a: 6, c: 3, g: 12, t: 4, other: 0 Dinucleotide summary: aa: 5, ac: 1, ag: 1, at: 2, ca: 0, cc: 1, cg: 6, ct: 0, ga: 0, gc: 0, gg: 3, gt: 0, ta: 1, tc: 1, tg: 2, tt: 2, other: 0 >chr17:43230575-43230932 (-) gacactgcactccagcctaggcaacagagcaagacccatctcaaaaaaaaaaaaaaaaaaaagccaggcgcggtggcttatgcctatattgccaacactttgggaggctgagacgggcggatcacttgaagtcaggagttcgagaccagcctggcaaccatggcgagaccccgtctctactaaaaatagaaaaattagccagttgcagtggcgtgcacctgtaatcccagctactcgggaggctgaggcaggagaatcggttgaacccaggaggctgaggttgcagtgagccgaaatcacgctactgcactccagcctggcgacaga-gtgagactccgtctcaaaaaaaaaaaaaaag >AA515617:10-366 (-) gacactgcactccagcctgggcaacagagcaagacccatctcaaaaaaaaaggaaaaaaaaagccaggcgcggtggcttatgcctgtgttgccagcactttgggaggctgagacgggcggatcacttgaggtcgggagttcgagaccagcctggcaaccatggcgagaccccgtctctactaaggatagaaaaattggccggttgcagtggcgtgcacctgtggtcccggctgctcgggaggctgaggcgggggaatcggttgaacccgggaggctgaggttgcggtgggccgaggtcgcgctactgcactccagcctggcgacagacgtag--ctccgtctcaaaaaaaaaaaaaaaa End editing Edited EST: AA532656, type: ag Aligns to: chr17:73940839-73941280 (--) All mismatches: ag (37), ag (50), ag (51), ag (68), ag (80), ag (94), ag (98), ag (121), ag (131), ag (150), ag (156), ag (159), ag (163), ag (165), ag (166), ag (171), ag (192), ag (226), ag (238), ag (256), ag (261), ag (262), Editing mismatches: 22, all mismatches: 22, alignment length: 441, cluster length: 226, total number of As: 60 Locations in RNA: 37 50 51 68 80 94 98 121 131 150 156 159 163 165 166 171 192 226 238 256 261 262 Locations in genome: 73940875 73940888 73940889 73940906 73940918 73940932 73940936 73940959 73940969 73940988 73940994 73940997 73941001 73941003 73941004 73941009 73941030 73941064 73941076 73941094 73941099 73941100 Upstream nucleotide (in genome): t a c t g c g t c t a t a a a t a c a a a t Upstream nucleotide summary: a: 9, c: 4, g: 2, t: 7, other: 0 Downstream nucleotide (in genome): c g a g a g g g c g a c a a a c c c g g t a Downstream nucleotide summary: a: 7, c: 6, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 3, at: 1, ca: 1, cc: 2, cg: 1, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 3, tg: 3, tt: 0, other: 0 >chr17:73940839-73941280 (-) agatgaatatctgggcaggatctgagggtgtttggaatgacaccccccaatccagttgcatagatgggatgtctttgcaggtttgaggagatcatcgacctgcagagccccctttgacccagtacctcacgttttatttaaaatctaaatctggggccaggcgtgg-tggctcacgcctgtaatccaagcactttgggaggccgaagcgggtggatcacctgaggtcaggagtttgagaccatcctggccaacatggtgaaaccccgtctctactgaaaaaaatacaaaaattagctgggcatggtggtagcacgcgcctgtagtcccagctactcgggaggctgaggcaggataatcgcttgaacttggcgggtagaggttgcagtgagccaagatggtgccactacactgcagcctgggtggctgag-cgagactccgtctc >AA532656:1-441 (-) agatgaatatctgggcaggatctgagggtgtttggaatgacaccccccaatccagttgcatagatgggatgtctttgcaggtttgaggagatcatcgacctgcagagccccctttgacccagtacctcacgttttatttaaaatctaaatctggggccaggcgtggctg--tcacgcctgtggtccaggcactttgggaggccgaggcgggtggatcgcctgaggtcaggagtttgagaccatcctggccagcatggtgaaaccccgtctctgctgaggagaatgcagaaattggctgggcatggtggtagcgcgcgcctgtggtcccagctactcgggaggctggggcgggataatcgcttggacttggcgggtggaggttgcagtgagccgggatggtgccactgcactgcagcctgggtggctgagtcgag-ctccgtctc End editing Edited EST: AI422642, type: ag Aligns to: chr17:60097160-60097391 (--) All mismatches: cg (44), ag (50), ag (57), ag (58), ag (82), ag (101), ag (125), ag (180), ag (186), ag (190), ag (257), ag (258), ag (264), Editing mismatches: 12, all mismatches: 13, alignment length: 232, cluster length: 215, total number of As: 59 Locations in RNA: 50 57 58 82 101 125 180 186 190 257 258 264 Locations in genome: 60097170 60097177 60097178 60097202 60097221 60097245 60097300 60097306 60097310 60097377 60097378 60097384 Upstream nucleotide (in genome): g a t g t t a c a a t c Upstream nucleotide summary: a: 4, c: 2, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): t g a a a t c g c t a c Downstream nucleotide summary: a: 4, c: 3, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 1, ca: 0, cc: 1, cg: 1, ct: 0, ga: 1, gc: 0, gg: 0, gt: 1, ta: 3, tc: 0, tg: 0, tt: 1, other: 0 >chr17:60097160-60097391 (-) ggttcacacctgtaatcccagcactttgggaggccgaggcgggcggatcacagggtcaggagatcgagaccatcctggctaacgcagtgaaaccgtgtttctactaaaaatacaaaaaaattagccaggcttggtggtgggcgcctatagtcccagctactcgggaggctaaggcaggagaatggcgtgaacctggcaggcagagcttgcagtaagccgagattgtgccact >AI422642:40-271 (-) ggttcacgcctgtggtcccagcactttgggaggccgaggcgggcggatcacagggtcaggagatcgagaccatcctggctagcgcggtgaagccgtgtttctactaaaaatacaaaaaaattagccaggcttggtggtgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtggacctggcaggcagagcttgcagtgggccgaggttgtggcact End editing Edited EST: AI587062, type: ag Aligns to: chr17:48783023-48783387 (--) All mismatches: ag (67), ag (68), ag (75), ag (93), ag (114), ag (132), ag (137), ag (154), ag (160), ag (164), ag (169), ag (173), ag (177), ag (179), ag (182), ag (193), ag (203), ag (204), ag (216), ag (227), ag (235), ag (240), ag (270), Editing mismatches: 23, all mismatches: 23, alignment length: 365, cluster length: 204, total number of As: 56 Locations in RNA: 67 68 75 93 114 132 137 154 160 164 169 173 177 179 182 193 203 204 216 227 235 240 270 Locations in genome: 48783089 48783090 48783097 48783115 48783136 48783154 48783159 48783176 48783182 48783186 48783191 48783195 48783199 48783201 48783204 48783215 48783225 48783226 48783238 48783249 48783257 48783262 48783292 Upstream nucleotide (in genome): a c a c c c c t c t a t a t t a a c g c c c a Upstream nucleotide summary: a: 7, c: 10, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g a t g g g t g g g a c g a c c c a c g c g t Downstream nucleotide summary: a: 4, c: 6, g: 10, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 2, at: 2, ca: 2, cc: 1, cg: 6, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr17:48783023-48783387 (-) cacataactattaatatgatagcaccagaaccatggtttccagactgcctcaaaagtctacctacctggacctggcgcggtggctgacgcctgtaatctcagcactttgggaggccaaggtgggcagatcacgatgtcaggagttcgagaccattctggccaacatggtgaaaccctgtctctactaaagatacaaaaattagccaggggtagcggtgtgtgcctgtcatcccagctacttgggatgctgcagcaggagaatcacttgaaccagggagttggaggttgaaatgagccaagatcacaccactgcactccaggctggtggcagagcgagactctgtctcaaaaaaaaaaaaaaaaaa >AI587062:1-365 (-) cacataactattaatatgatagcaccagaaccatggtttccagactgcctcaaaagtctacctacctggacctggcgcggtggctgacgcctgtagtctcagcactttgggaggccaaggtgggcggatcgcgatgtcgggagttcgaggccattctggccggcatggtgaagccctgtctctgctgaggatgcaagaattggccgggggtggcggtgtgtgcctgtcgtcccggctacttgggatgctgcggcaggagaatcacttgaaccggggagttggaggttgaagtgagccgggatcacaccactgcactccaggctggtggcagagcgagactctgtctcaaaaaaaaaaaaaaaaaa End editing Edited EST: AL698828, type: ag Aligns to: chr17:76865619-76866152 (--) All mismatches: ag (2), ag (58), ag (63), ag (95), ag (112), ag (118), ag (157), ag (167), ag (196), ag (203), ag (222), ag (232), tc (249), ag (273), ag (296), Editing mismatches: 14, all mismatches: 15, alignment length: 535, cluster length: 295, total number of As: 58 Locations in RNA: 2 58 63 95 112 118 157 167 196 203 222 232 273 296 Locations in genome: 76865620 76865676 76865681 76865713 76865730 76865736 76865775 76865785 76865814 76865821 76865840 76865850 76865891 76865914 Upstream nucleotide (in genome): c c g c t t t t a c c t c t Upstream nucleotide summary: a: 1, c: 6, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): c g c c g t t g g g c t g c Downstream nucleotide summary: a: 0, c: 5, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 3, cg: 3, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 3, other: 0 >chr17:76865619-76866152 (-) ccatctgtctccacatcttcccaaaccaaaactccgtccccgttaaacactaactcccccttctctctt-cctcag-ccttggcccacctccattttactttctgtctctgtggatttgactactccaggggcctcacatgggtggaaccctgcagtgtttgtcctctctgtctggcttatttcagtagcatcatgttttcaaggttcgttcacgttacagcatacatcagaatttccttactcttttttttgtttttgagacagagtctcgctctatttcccaggctggggtgcaatggcactatctcggctcactgcaacctccgcttcccaggttcaagcgattctcctgcctcagcctctcaagtagctgggattataggcacacgccaccacacctggctaatttttttttgtatttttagtacagacagggtttcaccacgttgaccaggctggtctccaacttctgacctcaggtgatccgcccacctcagcctcccaaagtgttgggattacaggcgtgagccaccac >AL698828:1-535 (-) ccatctgtctccacatcttcccaaaccaaaactccgtccccgttaaacactaactcccccttctctcttccctcagcccttgg-ccacctccattttactttctgtctctgtggatttgactactccaggggcctcacatgggtggaaccctgcagtgtttgtcctctctgtctggcttatttcagtagcatcatgttttcaaggttcgttcacgttacagcatacatcagaatttccttgctcttttttttgtttttgagacggagtctcgctctatttcccaggccggggtgcaatggcactgtctcggctcgctgcaacctccgcttcccgggttcaggcgattctcctgcctcagcctctcaagtggctgggattgtaggcacacgccaccacacctggctaatttttttttgtgtttttggtacagacagggtttcgccacgttgaccaggctggtctccaacttntggcctcgggtgatccgcccacctcagcctcccaaagtgttgggattacaggcgtgagccaccgc End editing Edited EST: DB302575, type: ag Aligns to: chr19:40453377-40453938 (--) All mismatches: ag (25), ag (38), ag (43), ag (61), ag (121), ag (147), ag (187), ag (200), ag (202), ag (208), ag (210), ag (219), ag (228), ag (254), Editing mismatches: 14, all mismatches: 14, alignment length: 562, cluster length: 230, total number of As: 63 Locations in RNA: 25 38 43 61 121 147 187 200 202 208 210 219 228 254 Locations in genome: 40453401 40453414 40453419 40453437 40453497 40453523 40453563 40453576 40453578 40453584 40453586 40453595 40453604 40453630 Upstream nucleotide (in genome): t c c t t t a g a g a c c a Upstream nucleotide summary: a: 4, c: 4, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): g g c g g g c c g g g c g t Downstream nucleotide summary: a: 0, c: 4, g: 9, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 1, ca: 0, cc: 2, cg: 2, ct: 0, ga: 0, gc: 1, gg: 1, gt: 0, ta: 0, tc: 0, tg: 4, tt: 0, other: 0 >chr19:40453377-40453938 (-) gccacacacttttaagctatcagatctcatgagaactcacgtactattgtgaaaacagcattggggaaactgcccccgtgatccagtcacctcccaccaagtacttcccttgacatgaggggattacaattcgagatgagatttgggtggggacacagagccaaaccatattaagctccctgcccaaatagctgttatgtcctataaagggcatcaaaaagacaattctttaatcagccaaggaaacaaccaggctgatagagctgccaaacgggcagctgggccgggcgcgttagctcattcctgtaatcccagcactttgggaggccgaggcaggcggatcacgaggtcaagagatcaagaccatcctggctaacatggtgaaaccccgtctctactgaaaacacaaaaaattagctgggcatggtggcaggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttagagtgagctgaaaccgcaccacagcactccagcctaggggacagagcgagactccatctc >DB302575:1-562 (-) gccacacacttttaagctatcagatctcatgagaactcacgtactattgtgaaaacagcattggggaaactgcccccgtgatccagtcacctcccaccaagtacttcccttgacatgaggggattacaattcgagatgagatttgggtggggacacagagccaaaccatattaagctccctgcccaaatagctgttatgtcctataaagggcatcaaaaagacaattctttaatcagccaaggaaacaaccaggctgatagagctgccaaacgggcagctgggccgggcgcgttagctcattcctgtagtcccagcactttgggaggccgaggcgggcggatcgcgaggtcaggggatcagggccatcctggctagcatggtgaaaccccgtctctactgaaaacacaaaaaattggctgggcatggtggcaggcgcctgtggtcccagctacttgggaggctgaggcaggagaatggcgtgaacccgggaggtggagcttggagtgagctgaaaccgcgccacggcactccagcctgggggacagagcgagactccatctc End editing Edited EST: DB344193, type: ag Aligns to: chr19:6034259-6034522 (--) All mismatches: ag (15), ag (49), ag (50), ag (58), ag (78), ag (84), ag (120), ag (142), ag (146), ag (152), ag (161), ag (175), Editing mismatches: 12, all mismatches: 12, alignment length: 264, cluster length: 161, total number of As: 42 Locations in RNA: 15 49 50 58 78 84 120 142 146 152 161 175 Locations in genome: 6034273 6034307 6034308 6034316 6034336 6034342 6034378 6034400 6034404 6034410 6034419 6034433 Upstream nucleotide (in genome): a a c c a c t t t a t a Upstream nucleotide summary: a: 5, c: 3, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t g a g c c g g g a a c Downstream nucleotide summary: a: 3, c: 3, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 1, ca: 1, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 3, tt: 0, other: 0 >chr19:6034259-6034522 (-) ctcatgcctgtaatcccagcactttgggaggctgaggcgggtggatcacaaggtcaagagatggagacaatcctggccaacatggtgaaaccccgtctctactaaaaatgcaaaaattagctaggtgtggtggtgcgcacctgtagtcccagctcatcgggaggctgaggcagcagaatcacttgaacccgggaggcggaggttgcagtgagccaagattgtgccactgcactccagcctggtaacagaatgagactccgtctc >DB344193:1-264 (-) ctcatgcctgtaatcccagcactttgggaggctgaggcgggtggatcacaaggtcaagagatggagacaatcctggccaacatggtgaagccccgtctctactgaaaatgcagaaattggctgggtgtggtggtgcgcacctgtggtcccagctcatcgggaggctgaggcagcagaatcgcttgagcccgggaggcggaggttgcggtgagccgggattgtgccactgcactccagcctggtaacagagtgagactccgtctc End editing Edited EST: DB299649, type: ag Aligns to: chr19:45671279-45671733 (--) All mismatches: ag (35), ag (55), ag (79), ag (107), ag (115), ag (150), ag (151), ag (155), ag (158), ag (160), ag (189), ag (204), Editing mismatches: 12, all mismatches: 12, alignment length: 455, cluster length: 170, total number of As: 45 Locations in RNA: 35 55 79 107 115 150 151 155 158 160 189 204 Locations in genome: 45671313 45671333 45671357 45671385 45671393 45671428 45671429 45671433 45671436 45671438 45671467 45671482 Upstream nucleotide (in genome): c g a c c a a a t a t c Upstream nucleotide summary: a: 5, c: 4, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): c g c g g t a a c t a a Downstream nucleotide summary: a: 4, c: 3, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 2, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr19:45671279-45671733 (-) agtgagtgtgggcccgtgtgcgccctgtgatgggatggcgttctgtccagggtccattcctgcttttggccctgccaggacgggctctggccacccaggaccctgagctggaggaagcgagtaaatgtcttactggttttttgttttttatttattttttaagacagggtcagggccgggcgcggtggctcacgcctataatcccagcactttgggaggccgaggtgggtgaatcacgaggtcaggagatcaagaccatcctggctaacatggtgaaaccccgtccctgctaaaaatacaaaaaaattagctgggcgtggtggcgggtgcctatagtgccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagattgcgccactgcactccagcctgggcgacagggcgagactctgtctc >DB299649:1-455 (-) agtnagtgtgggcccgtgtgcgccctgtgatgggatggcgttctgtccagggtccattcctgcttttggccctgccagnacgggctctggccacccaggaccctgagctggaggaagcgagtaaatgtcttactggttttttgttttttatttattttttaanacagggtcagggccgggcgcggtggctcacgcctataatcccagcactttgggaggccgaggtgggtgaatcacgaggtcaggagatcgagaccatcctggctgacatggtgaaaccccgtccctgctaaaagtgcagaaaggttagctgggcgtggtggcgggtgcctatagtgccggctactcgggaggctgaggcaggagaatggcgtgagcccgggaggcggagcttgcagtgggccgagattgcgccactgcgctccagcctgggcgacagggcgagactctgtctc End editing Edited EST: DB301069, type: ag Aligns to: chr19:21470970-21471503 (--) All mismatches: ag (1), ag (7), ag (17), ag (20), ag (41), ag (45), ag (57), ag (81), ag (100), ag (106), ag (113), ag (117), ag (123), ag (133), ag (152), ag (153), ag (158), ag (162), ag (167), ag (178), ag (179), ct (278), tc (419), Editing mismatches: 21, all mismatches: 23, alignment length: 535, cluster length: 179, total number of As: 54 Locations in RNA: 1 7 17 20 41 45 57 81 100 106 113 117 123 133 152 153 158 162 167 178 179 Locations in genome: 21470970 21470976 21470986 21470989 21471010 21471014 21471026 21471050 21471069 21471075 21471082 21471086 21471092 21471102 21471121 21471122 21471127 21471131 21471136 21471147 21471148 Upstream nucleotide (in genome): a t a a a c g a g g t c t c a a t a t a a Upstream nucleotide summary: a: 10, c: 3, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): n t c g t c g c g g c g g c t a c a c c a Downstream nucleotide summary: a: 3, c: 8, g: 6, t: 3, other: 1 Dinucleotide summary: aa: 3, ac: 3, ag: 1, at: 2, ca: 0, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 3, gt: 0, ta: 0, tc: 3, tg: 1, tt: 1, other: 1 >chr19:21470970-21471503 (-) tcttttgaaaaataagcattttactcatttttaatttgttttttgtgatatagtcatttgaattttaatatatttttgatattaaccctttgtcacatgtatgatttgcacatattttctcttatttcttagttgtcacatcctgttgatttcatcagattctgtgcagcagctttttaatttgaagtaatctgagtcatcta-tttttcctttgctttcctggggtttgagtttaaatcataaagtcactgccagccgggtgtggtgattcatgcctgcaatcccagcattttgggaggccgaggcaggtggatcacttgaggccagtttgagaacagcctggccagcatggtgaaaccccgtctctactaaaaatacaaaaattagccagacttgatggcacacacctgtagtcccagctacttgggaggctgaggcaggagaattgcttgaacccgggagatggaggttgcagtgagctgaggttgcaccaatgcactccagcctgtgcaaaagaacgagactctatctcaa >DB301069:1-535 (-) tcttttgaaaaataagcattttactcatttttaatttgttttttgtgatatagtcatttgaattttaatatatttttgatattaaccctttgtcacatgtatgatttgcacatattctctcttatttcttagttgtcacatcctgttgatttcatcagattctgtgcagcagctttttaatttgaagtaatctgagtcatctattttttcctttgctttcctggggtttgagtttaaatcataaagtcactgccagctgggtgtggtgattcatgcctgcaatcccagcattttgggaggccgaggcaggtggatcacttgaggccagtttgagaacagcctggccagcatggtgaggccccgtctctgctaagaatgcaaaggttagccagacttgatggcgcacacctgtggtcccggctgcttggggggctggggcaggagaattgcttgagcccgggagatggaggttgcagtgggctgaggttgcgccagtgcactccagcctgtgcaaaggagcgagactctgtctcag End editing Edited EST: DW421314, type: ag Aligns to: chr19:18381188-18381476 (--) All mismatches: ag (33), ag (35), ag (48), ag (62), ag (74), ag (125), ag (136), ag (179), ag (191), ag (207), ag (208), ag (209), Editing mismatches: 12, all mismatches: 12, alignment length: 289, cluster length: 177, total number of As: 36 Locations in RNA: 33 35 48 62 74 125 136 179 191 207 208 209 Locations in genome: 18381211 18381213 18381226 18381240 18381252 18381303 18381314 18381357 18381369 18381385 18381386 18381387 Upstream nucleotide (in genome): c t a c a t t t c a a c Upstream nucleotide summary: a: 4, c: 4, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g c a c g g t g g t a a Downstream nucleotide summary: a: 3, c: 2, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 1, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 1, other: 0 >chr19:18381188-18381476 (-) acaaaaaagagatagggtctcattctgtcgctcaggctcgagtgcagtggtgccatcgtagcttactgcagtctcaacctcctggcctcaaatgatcctcctgtctcagcctcccgagtagctgggactacaggtgcatgtcaccatgactggctaatttttatgtttttagtagagacgggttttaccatgttgcccaggctggtctggaactcctggcctcaagtgacccacccaccttggccttccaaattgctggggttacagacgtgagccactgtgcccggcc >DW421314:10-298 (-) acaaaaaagagatagggtctcattctgtcgctcaggctcgagtgcagtggtgccatcgtagcttactgcagtctcaacctcctggcctcgggtgatcctcctgtctcggcctcccgagtggctgggactacaggtgcatgtcaccatgactggctaatttttgtgtttttagtggagacgggttttaccatgttgcncaggctggtctggaactcctggcctcaggtgacccacccgccttggccttccagattgctggggttgcggacgtgagccactgtgcccggcc End editing Edited EST: DW465886, type: ag Aligns to: chr19:19047517-19047825 (--) All mismatches: ag (47), ag (62), ag (78), ag (102), ag (170), ag (172), ag (182), ag (185), ag (194), ag (240), ag (246), ag (256), ag (277), ac (279), Editing mismatches: 13, all mismatches: 14, alignment length: 311, cluster length: 231, total number of As: 40 Locations in RNA: 47 62 78 102 170 172 182 185 194 240 246 256 277 Locations in genome: 19047554 19047569 19047585 19047609 19047677 19047679 19047689 19047692 19047701 19047747 19047753 19047763 19047784 Upstream nucleotide (in genome): a c g t c t t t c a c g c Upstream nucleotide summary: a: 2, c: 5, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): g c c g g c g g g g c t g Downstream nucleotide summary: a: 0, c: 4, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 0, cc: 2, cg: 3, ct: 0, ga: 0, gc: 1, gg: 0, gt: 1, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr19:19047517-19047825 (-) tttttttttttttttt--gagacggagtctcgctctgtcgcacaggctggagtgcagtggcgcgatcttggctcactgcaagctctgcctcccaggttcacaccattcttctgattcttctgcctcagcctccctagtagctgggactacaggcgcctgccaccacgccctgctaattttttttgtatttttaatagagacgggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccacccaccttggcctcccaaagtgctgggattacaggtgtgagccaccgcgcccggcc >DW465886:10-320 (-) ttttttttttttttttcggagacggagtctcgctctgtcgcccgggctggagtgcagtggcgcggtcttggctcgctgcaggctctgcctcccaggttcacaccattcttctgattcttctgcctcggcctccctggtggctgggactgcgggcgcctgccaccacgccctgctaattttttttgtatttttaatagagacgggggtttcaccgtgttggccaggatggtctcgatctcctggcctcgtgatccacccgccttggcctcccaaggtgctgggattacaggtgtgagccaccgcgcccggcc End editing Edited EST: AW007789, type: ag Aligns to: chr19:46135162-46135486 (--) All mismatches: ag (102), ag (120), ag (129), ag (130), ag (148), ag (185), ag (186), ag (196), ag (225), ag (227), ag (249), ag (271), ag (279), ag (294), ag (295), ag (296), Editing mismatches: 16, all mismatches: 16, alignment length: 325, cluster length: 195, total number of As: 54 Locations in RNA: 102 120 129 130 148 185 186 196 225 227 249 271 279 294 295 296 Locations in genome: 46135263 46135281 46135290 46135291 46135309 46135346 46135347 46135357 46135386 46135388 46135410 46135432 46135440 46135455 46135456 46135457 Upstream nucleotide (in genome): a t a t c a a c c c t c c a a a Upstream nucleotide summary: a: 7, c: 6, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g c t a t c a a a c g c g a a a Downstream nucleotide summary: a: 7, c: 4, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 1, at: 1, ca: 2, cc: 2, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr19:46135162-46135486 (-) gcgacagagcgagactcgtactcaaaaaaaaaaaaaggccaggtgcagtggctcacgcctgtaatcctagcactttaggaggccgaggcgggcggatcacaaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactgaaaatacaaaaattagctgggcatggcggagggtgcctgtaatcccagctacttgggaggctgaggcaagagagttgcttgaacctgggaggcggagtttgcagtgagccgccgagatcgcgccattgcactgcagcctgggcgacagggcgagactccaactaaaaaaa >AW007789:1-325 (-) gcgacagagcgagactcgtactcaaaaaagggaaaaggccaggtgcggtggctcgcgcctgtaatcctagcactttgggaggccgaggcgggcggatcgcgaggtcaggagtttgagaccagcctggccgacatggtgaggccccgtctctactgaaaatacaaaaattagctgggcgtggcggagggtgcctgtggtcccagctgcttgggaggctgaggcaggagagttgcttgaacctgggaggcggagtttgcagtgagccgccgagatcgcgccattgcactgcagcctgggcgacagggcgagactccaactaaaaaaa End editing Edited EST: BE065177, type: ag Aligns to: chr19:14598905-14599187 (--) All mismatches: tg (21), ag (104), ag (111), ag (118), ag (120), ag (134), ag (142), ag (173), ag (185), ag (190), ag (211), ag (214), ag (255), ag (268), ag (277), Editing mismatches: 14, all mismatches: 15, alignment length: 284, cluster length: 174, total number of As: 38 Locations in RNA: 104 111 118 120 134 142 173 185 190 211 214 255 268 277 Locations in genome: 14598990 14598997 14599004 14599006 14599020 14599028 14599059 14599071 14599076 14599097 14599100 14599141 14599154 14599163 Upstream nucleotide (in genome): c g c t c c a c t t t c g c Upstream nucleotide summary: a: 1, c: 7, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): t g g c a a a g g g g c g g Downstream nucleotide summary: a: 3, c: 2, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 2, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr19:14598905-14599187 (-) gcattcaagtgattctcccacctcagcttcccgagtagctgggatcacaggtgtgcaccaccacgcccacctgtgtattgtatttttagtagagatggggttttgccatgtaggccaggctggtctcaaactgctgacctcatgtgatccgtcaacctcaacctcccaaagtgctgggattacaggcttgagccaccatgcccagccccagctcagggcctttctactggctgttctctctacttgggacgttcttgccccaaatca-ttgcatgaatgcttcc >BE065177:18-301 (-) gcattcaagtgattctcccacctcggcttcccgggtagctgggatcgcaggtgtgcaccaccacgcccacctgtgtattgtatttttggtggagatggggttttgccatgtgggccgggctggtctcagactgctgacctcatgtgatccgtcaacctcgacctcccgaagtgctgggattgcgggcttgggccaccgtgcccagccccagctcagggcctttctactggctgttctctctacttgggacgttcttgccccaaatcaattgcatgaatgcgtcc End editing Edited EST: AA126221, type: ag Aligns to: chr19:55550478-55550973 (--) All mismatches: ag (164), ag (166), ag (179), ag (234), ag (235), ag (240), ag (260), ag (327), ag (330), tg (439), ag (477), ag (483), ag (486), ag (489), Editing mismatches: 13, all mismatches: 14, alignment length: 498, cluster length: 325, total number of As: 63 Locations in RNA: 164 166 179 234 235 240 260 327 330 477 483 486 489 Locations in genome: 55550641 55550643 55550656 55550711 55550712 55550717 55550737 55550804 55550807 55550953 55550959 55550962 55550965 Upstream nucleotide (in genome): c t a a t c t t a t t t a Upstream nucleotide summary: a: 4, c: 2, g: 0, t: 7, other: 0 Downstream nucleotide (in genome): g c a c a t g g g c g c g Downstream nucleotide summary: a: 2, c: 4, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 0, ca: 0, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 3, tg: 3, tt: 0, other: 0 >chr19:55550478-55550973 (-) cctcct-aaagtactaggattacaggcatgggccaccacgcccggccttatttttatttttgaga-cagtctcactctg-ccgcccaggctggagtgcagtggtgcgatctcggcttaccgcaatctctgcctcccaggttcaagcgattctcatgcctccgtctcccaagtagctgggattacaggcacctgccaccatgcccggctaatttaacgcccagctaatttttgtatttttagtagagatggggtttcaccatgttaaccaggctggtctcggactcctgacctcaggtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccactgtgcctggctgatttttattcttttagttaaggctggttgatattaccttgtgtgtatataccacatgttgtttatccattgttgttgatggacatgtgggtggtttcaccttttggctattgtgaataaagctgctatgaacactgtgt >AA126221:1-498 (-) cctcctaaaggtgctgggatngcaggcat-ggccaccacgcccggccttatttttattttggagaccagtctcactctgcccgcccaggctggagtgcagtggtgcgatctcggcttaccgcaatctctgcctcccaggttcaagcgattctcatgcctccgtctcccaggtggctgggattacaggcacctgccaccatgcccggctaatttaacgcccagctaatttttgtatttttggtagagatggggtttcaccgtgttggccaggctggtctcggactcctgacctcaggtgatccgcccgcctcggcctcccagagtgctgggattgcgggcgtgagccactgtgcctggctgatttttattcttttagttaaggctggttgatattaccttgtgtgtatataccacatgttgtttatccattgttgttgatggacatgtgggtggtttcaccttttggctattgtgaataaagctgctatgaacactgtgt End editing Edited EST: AA845690, type: ag Aligns to: chr19:48586663-48587116 (--) All mismatches: ag (105), ag (135), ag (139), ag (140), ag (163), ag (191), tc (192), ag (207), ag (211), ag (219), ag (235), ag (245), ag (269), ag (284), ag (306), ag (321), Editing mismatches: 15, all mismatches: 16, alignment length: 453, cluster length: 217, total number of As: 60 Locations in RNA: 105 135 139 140 163 191 207 211 219 235 245 269 284 306 321 Locations in genome: 48586767 48586797 48586801 48586802 48586825 48586853 48586869 48586873 48586881 48586897 48586907 48586931 48586946 48586968 48586983 Upstream nucleotide (in genome): c c a g a t t a a a a c c c c Upstream nucleotide summary: a: 6, c: 6, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): c g c a g c g a a c c g g c c Downstream nucleotide summary: a: 3, c: 7, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 1, at: 0, ca: 0, cc: 3, cg: 3, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr19:48586663-48587116 (-) atccaaagcctgtctgcctgaatccacatcccagctccacctctcatgcgttagtgaccctagaaagctgcttaaattctctgtgaaaaaaattaaaaaataaagaaatgaggggccgggcgcag-tggctcacacctgtaatctcagcactttgggaggctgaggtgggcagatcacctgaggtcaggagtttgagaccagcctgaccaacgtggagaaaccccatctctactaaaaatacaaaattagccgggcgtggtggtacatgcctgtaatcccagctacacgggaagctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagctgagatcacaccattgcactccagcctgggcaacaagagtgaaacacagtctcaaaaaaaaaaaaagaaaaaagaaaaagaaaaagaaaaaaaagaaatgaaacaaacaaaa >AA845690:1-453 (-) atccaaagcctgtctgcctgaatccacatcccagctccacctctcatgcgttagtgaccctagaaagctgcttaaattctctgtgaaaaaaattaaaaaataaagaaatgaggggccgggcgcagct-g-tcacgcctgtaatctcagcgctttgggaggctgaggtgggcggatcacctgaggtcgggagtttgagaccagcctgaccagcgtggagaagccccatctctactaagaatacaagattggccgggcgtggtggcgcatgcctgtaatcccagctacacgggaggctgaggcaggagaatcgcttgggcccgggaggtggaggttgcagtgagctgagatcgcaccattgcactccagcctgggcaacaagagtgaaacacagtctcaaaaaaaaaaaaagaaaaaagaaaaagaaaaagaaaaaaaagaaatgaaacaaacaaaa End editing Edited EST: AI874376, type: ag Aligns to: chr19:40482770-40483084 (--) All mismatches: ag (48), ag (51), ag (55), ag (56), ag (59), ag (77), ag (125), ag (126), ag (146), ag (167), ag (192), ag (228), ag (241), ag (242), ac (292), Editing mismatches: 14, all mismatches: 15, alignment length: 315, cluster length: 195, total number of As: 59 Locations in RNA: 48 51 55 56 59 77 125 126 146 167 192 228 241 242 Locations in genome: 40482817 40482820 40482824 40482825 40482828 40482846 40482894 40482895 40482915 40482936 40482961 40482997 40483010 40483011 Upstream nucleotide (in genome): c t a c a a a t g a c c a c Upstream nucleotide summary: a: 6, c: 5, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): c g g a c g t a t g t c g a Downstream nucleotide summary: a: 3, c: 3, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 4, at: 1, ca: 2, cc: 2, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr19:40482770-40483084 (-) tgatgagcttaaaaaaaaaaatcacagccgggtgcagtggctcacgcctgtaatcccagaattttgggaggccaaggtgggtggatcacctgaggccaggagttcgagacctgcctggccaacatggtgcaaccccatttctaccaaaagtacaaaaaaaattagccagatgtggtggcatgtacctgtaattccagccactcgggaggctgaggtaggagaatcgcttgaacccagaaggcagaggttgcagtgaaccaagatagcaccactgcactccagcctgggctacagagtgagactctgtctcaaaaa >AI874376:1-315 (-) tgatgagcttaaaaaaaaaaatcccagccgggtgcagtggctcacgcctgtaatcccagaattttgggaggccggggtgggtggatcgcctgaggccaggagttcgagacctgcctggccaacgtggtgcaaccccatttctaccaaaggtacaaaaaaaattagccaggtgtggtggcatgtacctgtggttccagccactcgggaggctgaggtaggagaatcgcttgaacccagagggcagaggttgcagtgagccgggatggcgccactgcactccagcctgggctacagagtgagactctgtctcaaaaa End editing Edited EST: AU147998, type: ag Aligns to: chr19:19867183-19867624 (--) All mismatches: ag (181), ag (213), ag (214), ag (218), ga (236), ag (242), ag (243), ag (278), ag (284), ag (306), ag (310), ag (315), ag (316), ag (317), ag (324), ag (325), ag (350), ag (363), ag (401), ag (417), ag (418), Editing mismatches: 20, all mismatches: 21, alignment length: 443, cluster length: 238, total number of As: 59 Locations in RNA: 181 213 214 218 242 243 278 284 306 310 315 316 317 324 325 350 363 401 417 418 Locations in genome: 19867361 19867393 19867394 19867398 19867422 19867423 19867458 19867464 19867486 19867490 19867495 19867496 19867497 19867504 19867505 19867530 19867543 19867581 19867597 19867598 Upstream nucleotide (in genome): a a c g a g c t c t a a a a a a g g a t Upstream nucleotide summary: a: 10, c: 3, g: 4, t: 3, other: 0 Downstream nucleotide (in genome): g g a g c a g g g g a a a a a c c g t a Downstream nucleotide summary: a: 8, c: 3, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 5, ac: 2, ag: 2, at: 1, ca: 1, cc: 0, cg: 2, ct: 0, ga: 1, gc: 1, gg: 2, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 0 >chr19:19867183-19867624 (-) ggccggg-cgcggtggctcacgcctgtaatcccagcactttgggaggctgaggtgggcggatcacgaggtcaggagatcgagaccatcgtggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccaggcacggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcggtgagccaagatcgcgccactgcacttccgcctgggcgaaagagcgagactccatctc--aaaaaaaaaaaaaaaaaaaagcaaagacgtgcctgctacgctttcaccttccaccatcattgaaagtttcctaaggcctctccagaagccgaatagataccagcatcatgcttcctgtacagcctttagaaccatgagccaattaaacctcttttctttat >AU147998:1-443 (-) ggccgggnng-gg-ggctcangcctgtggtcccagcactttggggggntnaggtgggcggatcacgaggtcaggagatcgaggccatcgtggctagcacggtgaaaccccgtctntactaggaatacagggaattggccgggcacggtggcgggcgcctgtggtcccggctactcgggaggctgaggcaggagaatggcgtgggcctggaaggcggagcttgcggtgggccgggatcgcgccactgcacttccgcctgggcgaaggagcgagactccatntcaaaaaaaaaaaaaaaaaaaaaagcaaagacgtgcctgctacgctttcaccttccaccatcattgaaagtttcctaaggcctctccagaagccgaatagataccagcatcatgcttcctgtacagcctttagaaccatgagccaattaaacctcttttctttat End editing Edited EST: DB297174, type: ag Aligns to: chr1:241182668-241183202 (--) All mismatches: ag (46), ag (50), ag (54), ag (58), ag (60), ag (96), ag (103), ag (107), ag (121), ag (127), ag (168), ag (185), ag (187), ag (195), ag (197), ag (218), ag (240), at (242), ag (245), ag (246), ag (255), ag (265), ag (266), ag (282), ag (289), ag (372), tc (522), Editing mismatches: 25, all mismatches: 27, alignment length: 535, cluster length: 327, total number of As: 113 Locations in RNA: 46 50 54 58 60 96 103 107 121 127 168 185 187 195 197 218 240 245 246 255 265 266 282 289 372 Locations in genome: 241182713 241182717 241182721 241182725 241182727 241182763 241182770 241182774 241182788 241182794 241182835 241182852 241182854 241182862 241182864 241182885 241182907 241182912 241182913 241182922 241182932 241182933 241182949 241182956 241183039 Upstream nucleotide (in genome): a c t t t c t a t t c c c c a a a a a a a c a a g Upstream nucleotide summary: a: 11, c: 7, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): a a t c t g g t g g c g c c c g c c a g a a a g a Downstream nucleotide summary: a: 7, c: 7, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 3, ag: 3, at: 1, ca: 2, cc: 3, cg: 2, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 3, tt: 2, other: 0 >chr1:241182668-241183202 (-) tttcttctacccatcagagaactgaagtcataggtcaacatatcattttcaaatctgtagcaacactatagacacatgcacatgcatgtttattgtggcactattcacaatagcaaagacttggaaccgacccaaatgtccatcaataatagactggataaagaaaatgtggcacatatataccatagaatagtatgcagccataaaacaaggatgagttcatgtccttttcagggacatggatgaagctggaaaccatcattctcagcaaactatcacaaggacagaaaaccaaacaccgcatgttttcactcataagtgggagttgaacaatgagaacacatggacacagggaggggaccatcacacactggggcctgttgcggggtggggagctgggggagggatagcattaggagaaatacctaatgtaggtgacaggttgatggatgcagcaaaccaacatggcacatgtatacctatgcaacaaacctgcatgttgcgcacatgtaccctagaacttaaagtataattt >DB297174:1-535 (-) tttnttctacccaccagagaactgaagtcataggtcaacatatcattttcaaatctgtagcaacactatagacacatgcacatgcatgtttattgtggcactattcacaatagcaaagacttggaaccgacccaaatgtccatcaataatagactggataaaggaaatgtggcacatatataccatagaatagtatgcagccataaaacaaggatgagttcatgtccttttcagggacatggatgaggctggagaccatcattctcagcggactatcacagggacagaaggcctagcaccgcatgttttcactcataggtgggagttgaacaatgagagcgcatggacgcggggaggggaccatcacgcactggggcctgttgcggggtggggagctgggggagggatggcattgggagaaatacctagtgtgggtgacgggttgatggatgcagcaaaccaacatggcacatgtgtgcctgtgcgacagacctgcatgttgcgcacatgtaccctagaacttaaagtataattt End editing Edited EST: DB315960, type: ag Aligns to: chr1:156379746-156380295 (--) All mismatches: ag (1), ag (82), ag (83), ag (88), ag (97), ag (110), ag (118), ag (123), ag (124), ag (142), ag (146), ag (150), ag (161), ag (163), ag (165), ag (168), ag (174), ag (179), ag (180), ag (181), ag (189), ag (190), ag (204), ag (205), ag (213), ag (218), ag (232), ag (242), ag (250), ag (258), ag (266), ag (275), Editing mismatches: 32, all mismatches: 32, alignment length: 550, cluster length: 275, total number of As: 78 Locations in RNA: 1 82 83 88 97 110 118 123 124 142 146 150 161 163 165 168 174 179 180 181 189 190 204 205 213 218 232 242 250 258 266 275 Locations in genome: 156379746 156379827 156379828 156379833 156379842 156379855 156379863 156379868 156379869 156379887 156379891 156379895 156379906 156379908 156379910 156379913 156379919 156379924 156379925 156379926 156379934 156379935 156379949 156379950 156379958 156379963 156379977 156379987 156379995 156380003 156380011 156380020 Upstream nucleotide (in genome): a a g c c c c a t c c t a a t t t a a g a c a c c g c g c a a c Upstream nucleotide summary: a: 11, c: 12, g: 4, t: 5, other: 0 Downstream nucleotide (in genome): n c a c g g g t a t g g t a a c t c a a c a g a g g g g c t g g Downstream nucleotide summary: a: 8, c: 6, g: 12, t: 5, other: 1 Dinucleotide summary: aa: 2, ac: 3, ag: 2, at: 3, ca: 2, cc: 2, cg: 7, ct: 1, ga: 2, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 1, tt: 1, other: 1 >chr1:156379746-156380295 (-) aggaagggatgtctctaccacccaccttcagaatccctccttcccccacgacatgcgggggcagcaagcttatgggagctttctggggagagatgtggagaagcagaagttggtgtccctcagcacaatgagcaccctgatgtcggggcagggggatgggctgctgggggttgggggacagggatactggctctgactttgtggggcaacaagctagtctctgagctctcttatgaaaaaaaaaggaagggagggagggagggccggccgggcgcagtggcccaagcctgtaatctcagcactttgggaggccaaggcaggtggatcgcctgaggtcaggagttcaagaccagcctggccaacatggtgaaaccctatctctactaaaaatacaaaaattagccaggcatgatggcccatgcctgtaatcccagctattcaggaggctgaggcaggagaatcacttgaacctgggaggcagaggttgcagtgagctgaaatcaggccaatgccctccagtctgggcagcagagcaagactctgtctcaaa >DB315960:1-550 (-) aggaagggatgtctctaccacccaccttcagaatccctccttcccccacgacatgcgggggcagcaagcttatgggagctttctggggagagatgtggagaagcagaagttggtgtccctcagcacaatgagcaccctgatgtcggggcagggggatgggctgctgggggttgggggacagggatactggctctgactttgtggggcaacaagctagtctctgagctctcttatgaaaaaaaaaggaagggagggagggagggccggccgggcgcggtggcccaggcctgtagtctcagcgctttggggggccaaggcgggtggatcgcctggggtcgggagttcgggaccagcctggccggcatggtggggccctgtctctgctgagagtacaaaaattggccgggcgtgatggcccatgcctgtggtcccggctattcgggaggctgaggcgggagaatcgcttgggcctgggaggcagaggttgcagtgagctgaaatcaggccaatgccctccagtctgggcagcagagcaagactctgtctcaag End editing Edited EST: DB333869, type: ag Aligns to: chr1:200970535-200971058 (--) All mismatches: ag (83), ag (123), ag (135), ag (139), ag (142), ag (145), ag (150), ag (151), ag (152), ag (174), ag (176), ag (202), ag (206), ag (221), ct (506), Editing mismatches: 14, all mismatches: 15, alignment length: 524, cluster length: 139, total number of As: 44 Locations in RNA: 83 123 135 139 142 145 150 151 152 174 176 202 206 221 Locations in genome: 200970617 200970657 200970669 200970673 200970676 200970679 200970684 200970685 200970686 200970708 200970710 200970736 200970740 200970755 Upstream nucleotide (in genome): a c c t a a a a a t c c a c Upstream nucleotide summary: a: 7, c: 5, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g c g g t a t a a g t g c g Downstream nucleotide summary: a: 3, c: 2, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 2, ca: 0, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr1:200970535-200971058 (-) gattaaaatcgcctctccctgaaccctccaccccaagccctctctacttctcagaaggaacctctatgagcagcttggtgtgtattttcccacacctttctcagtatttgtttcaagtatgaatatgtattcatatacattcttaaatgtgtgtatgatatagactactttttctatgtatgagattatatatattgctctaagacttccctttttcatttagcattatgttttataaatctttccatattaaacctacttctggttcacgcctgtaatcccagcactttgggaggccacggcaggagaatcacttgaacccaggagtttgagaccagcctgggcaacatagggacgcctagtctctacaaaaaatacaaaaattagccagatgtggtggcacatgcctgtagttcatgttacttgggaggctgagatggaaggattgcctgagcccgggaggctgaggctgcagtcagctgtgactctagcctgggcgacagagcaagaccttggctctaacc >DB333869:1-524 (-) gattaaaatcgcctctccttgaaccctccaccccaagccctntntacttctcagaaggaacctctatgagcagcttggtgtgtattttcccacacctttctcagtatttgtttcaagtatgaatatgtattcatatacattcttaaatgtgtgtatgatatagactactttttctatgtatgagattatatatattgctctaagacttccctttttcatttagcattatgttttataaatctttccatattaaacctacttctggttcacgcctgtaatcccagcactttgggaggccacggcgggagaatcacttgagcccgggagtttgagaccagcctgggcaacgtggggacgcctagtctctacaaagggtacagaagttggccggatgtggtggcgcatgcctgtagttcatgttacttgggaggctgagatggagggattgcctgagcccgggaggctgaggctgcagtcagctgtgactctagcctgggcgacagagcaagaccttggctctaacc End editing Edited EST: DW431477, type: ag Aligns to: chr1:173836374-173836634 (--) All mismatches: ag (76), ag (99), ag (113), ag (127), ag (136), ag (138), ag (176), ag (177), ag (180), ag (181), ag (189), ag (203), ct (237), ag (263), Editing mismatches: 13, all mismatches: 14, alignment length: 261, cluster length: 188, total number of As: 40 Locations in RNA: 76 99 113 127 136 138 176 177 180 181 189 203 263 Locations in genome: 173836441 173836464 173836478 173836492 173836501 173836503 173836541 173836542 173836545 173836546 173836554 173836568 173836628 Upstream nucleotide (in genome): c g c t t t a t a c c a c Upstream nucleotide summary: a: 3, c: 5, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g c c g t t c a g a g g c Downstream nucleotide summary: a: 2, c: 4, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 0, ca: 1, cc: 2, cg: 2, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 2, other: 0 >chr1:173836374-173836634 (-) tctgtcacccaggctggaatgcagtggctcgacatcggttaatggcaacctccgcgtcccgagttaagcagttctgcctcagcctcccaagtaactgggactacaggcgcgcgccaccatgctaggcttttatatttttagtagagacggggtttcaccatgttggcgagactggtcttgaactcctgacctcaggtgatccaccagccgtggtcccccaacatactgggattacaagccgtgagccaccgcgcccggccg >DW431477:9-269 (-) tctgtcgcccaggctggaatgcagtggctcgatatcggttaatggcaacctccgcgtcccgagttaggcagttctgcctcggcctcccgggtggctgggactacaggcgcgcgccaccatgctaggcttttgtgtttttagtggagacggggtttcgccatgttggcgaggctggtcttgaactcctgacctcgggtgatccaccagccgtggtcccccaacatactgggattacaagccgtgagccaccgcgcccggccg End editing Edited EST: CA848247, type: ag Aligns to: chr1:150559001-150559518 (--) All mismatches: ag (195), ag (207), ag (208), ag (209), ag (247), ag (321), ag (323), ag (325), ag (331), ag (370), ag (371), ag (377), ag (396), ag (414), Editing mismatches: 14, all mismatches: 14, alignment length: 518, cluster length: 220, total number of As: 47 Locations in RNA: 195 207 208 209 247 321 323 325 331 370 371 377 396 414 Locations in genome: 150559186 150559198 150559199 150559200 150559238 150559312 150559314 150559316 150559322 150559361 150559362 150559368 150559387 150559405 Upstream nucleotide (in genome): t a a c a c c c t a c c c a Upstream nucleotide summary: a: 5, c: 7, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): c g a a c c c c c g a g c t Downstream nucleotide summary: a: 3, c: 7, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 1, ca: 2, cc: 4, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 0, tt: 0, other: 0 >chr1:150559001-150559518 (-) taaaaaataaataaataattgaaaaagcatcactacttaccctgcctcccattatagaaatcttttttttttttgaagcagaatttcgctcttgttgcccaggttggagtgcaatggtgtgatctcagctcactgcaacctctgcctcccaggttcaagcaattctcctgcctcagcctcccaagtagctgggattacaggcacacaccaccacacctggctaattttttgtaattttagtagagacagggtttctccatgttgatcaggctggtctcgaactcccgacttcaggtgatccacctgcctcggcctcccaaagtgctgggattacaggcttgagccatcgcacccggccggaaatcttggaagttatcttaaacttcttcctttctctttggtcacacatccaactggtcatcaaatcctgctgattctaccttgagaaatgtttctcaaatcaaagtcctttcatcctttcccattcttttttttttttcttttttcttttttgagac >CA848247:10-527 (-) taaaaaataaataaataattgaaaaagcatcactacttaccctgcctcccattatagaaatcttttttttttttgaagcagaatttcgctcttgttgcccaggttggagtgcagtggtgtgatctcagctcgctgcaacctctgcctcccgggttcgggcaattctcctgcctcagcctcccaagtagctgggattgcaggcgcgcgccaccacacctggctaattttttgtaattttagtagagacagggtttctccatgttgatcaggctggtctcgagctcccgacttcaggtgatccacctgcctcggcctcccggggtgctgggattgcaggcttgagccatcgcacccggccggaaatcttggaagttatcttaaacttcttcctttctctttggtcacacatccaactggtcatcaaatcctgctgattctaccttgagaaatgtttctcaaatcaaagtcctttcatcctttcccattcttttttttttttcttttttcttttttgagac End editing Edited EST: CB985899, type: ag Aligns to: chr1:27208430-27208726 (--) All mismatches: ag (21), ag (33), ag (52), ag (95), ag (112), ag (115), ag (155), ag (157), ag (196), ag (197), ag (227), ag (233), ag (240), Editing mismatches: 13, all mismatches: 13, alignment length: 297, cluster length: 220, total number of As: 47 Locations in RNA: 21 33 52 95 112 115 155 157 196 197 227 233 240 Locations in genome: 27208450 27208462 27208481 27208524 27208541 27208544 27208584 27208586 27208625 27208626 27208656 27208662 27208669 Upstream nucleotide (in genome): t a c c t t t a a c c c a Upstream nucleotide summary: a: 4, c: 5, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t g c t g g g t g a g a t Downstream nucleotide summary: a: 2, c: 1, g: 6, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 2, ca: 2, cc: 1, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 3, tt: 1, other: 0 >chr1:27208430-27208726 (-) ttttttttttttttttttgagacggaccgtcaatcttgttgccccagttggagtgcaatggtgcaatctcagctcactgcaacctccatctcccacgttcaagcaattctcctgcctcagcctcccgagtaagtgggataataggcgcccgccaccacgctcagctaattttttgtatttttagtagagacagcgttttaccatgttggccaggctggtttcgaactcctgaactcaggtgatccacctgccttggcctcccaaagtgctgggattataggcgtgagccaccatgcc >CB985899:1-297 (-) ttttttttttttttttttgagacggaccgtcaatcttgttgccccagttggagtgcagtggtgcgatctcggctcactgcaacctccatctcccacgttcgggcaattctcctgcctcagcctcccgagtaagtgggatagtgggcgcccgccaccacgctcagctaattttttgtatttttggtggagacagcgttttaccgtgttggccaggctggtttcgaactcctgaactcaggtgatccgcctgccttggcctcccaaggtgctgggattgtaggcgtgagccaccatgcc End editing Edited EST: BF920714, type: ag Aligns to: chr1:1662542-1662767 (--) All mismatches: ag (17), ag (73), ag (95), ag (120), ag (162), ag (172), ag (175), ag (176), ag (197), ag (201), ag (222), ag (232), Editing mismatches: 12, all mismatches: 12, alignment length: 224, cluster length: 218, total number of As: 44 Locations in RNA: 17 73 95 120 162 172 175 176 197 201 222 232 Locations in genome: 1662547 1662604 1662627 1662652 1662694 1662704 1662707 1662708 1662729 1662733 1662754 1662764 Upstream nucleotide (in genome): c t t t t t a c t a c c Upstream nucleotide summary: a: 2, c: 4, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): c a g a c g g a t g g g Downstream nucleotide summary: a: 3, c: 2, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 2, tt: 1, other: 0 >chr1:1662542-1662767 (-) ctcagctcactgcagcctcctcctcccgcgttcaagctattgtcctgcctcagccttccaagtagctgggattacaggcacccgccaccacacccagctagttatttgtatttttaacagagatgggatttcaccgtgttagccaggatggtctcgaactcctaacctcgtgatccgcctgcctcggccatccacagtgctgggattacaggcatgcgccacggcg >BF920714:12-235 (-) ctcggctcactgcggcctcctcctcccgcgttcaggctgttgtcctgcctcagccttccgggtggctgggattgcaggcacccgccaccacacccagctagttatttgtatttttgacagagatgggatttcaccgtgttg-ccaggatggtctcgaactcctgacctcgtgatccgcctgcctcggccatccacagtgctgggattacag-catgcgccgcggcg End editing Edited EST: BE042857, type: ag Aligns to: chr1:9987753-9987977 (--) All mismatches: ag (56), ag (94), ag (100), ag (104), ag (110), ag (117), ag (127), ag (143), ag (145), ag (153), ag (179), ct (190), ag (199), ag (207), ag (212), ag (215), Editing mismatches: 15, all mismatches: 16, alignment length: 224, cluster length: 160, total number of As: 47 Locations in RNA: 56 94 100 104 110 117 127 143 145 153 179 199 207 212 215 Locations in genome: 9987809 9987847 9987853 9987857 9987863 9987870 9987880 9987896 9987898 9987906 9987932 9987952 9987960 9987965 9987968 Upstream nucleotide (in genome): g a c g g t t t c t c c c a c Upstream nucleotide summary: a: 2, c: 6, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): g t g g g c g g t g g a g g c Downstream nucleotide summary: a: 1, c: 2, g: 10, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 1, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 3, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr1:9987753-9987977 (-) gggcggatcacaagatcaggagctcaagaccagcctggccaacacagtgaaactccatctctacaaaaattagccaggcatagtggcaggtgcctgtagtctcagctacttgggagactgaggcaggagaatcacttgaacctgggaggcagaggtttcggtgagccgagatggcgccactgcactccagcctgggcgacagactgagacacggtctcaaaaaaa >BE042857:1-224 (-) gggcggatcgcaggatcgggagctcgagaccagcttggccaacacggtgaaactccatctctacaaaaattggccaggcgtggtggcaggtgcctgtggtctcagctgcttgggggactggggcgggagagtcacttgaacctgggaggcagaggtttcggtgagccgggatggcgccactgcactccagcctgg-cgacagactgagacacggtctcaaaaaaa End editing Edited EST: BE676626, type: ag Aligns to: chr1:1253256-1253755 (--) All mismatches: ag (58), ag (59), ag (63), ag (80), ag (88), ag (99), ag (102), ag (121), ag (131), ag (156), ag (159), ag (191), ag (192), ag (198), ag (201), ag (224), ag (241), ag (259), ag (267), ag (268), ag (276), Editing mismatches: 21, all mismatches: 21, alignment length: 500, cluster length: 219, total number of As: 60 Locations in RNA: 58 59 63 80 88 99 102 121 131 156 159 191 192 198 201 224 241 259 267 268 276 Locations in genome: 1253313 1253314 1253318 1253335 1253343 1253354 1253357 1253376 1253386 1253411 1253414 1253446 1253447 1253453 1253456 1253479 1253496 1253514 1253522 1253523 1253531 Upstream nucleotide (in genome): a c g g g g c t c t a a g c t c c c a t c Upstream nucleotide summary: a: 4, c: 8, g: 5, t: 4, other: 0 Downstream nucleotide (in genome): g a g g a g g c g g t a a c a g g c t a c Downstream nucleotide summary: a: 6, c: 4, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 2, ca: 1, cc: 3, cg: 4, ct: 0, ga: 2, gc: 0, gg: 3, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr1:1253256-1253755 (-) actccctcagtacattttaaacccagaaagacatcatttctaatgcctggtaacaccaacatttgcttagttttatttatatatttatcctttttgttgggcttcctgcattttttctactttttacttgggataatttgccttctgcctgaagaatatgagtgtgggtctgctggtgctgaattctgtcaatttttatttgccttggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccgagacaggcggatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccctgtctctactaaacaaaatacaaaaaaattagctgggcgtggtgcgggcgcctgcagtcccagctactcgggaggctgaaaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagccaagatcccaccactgcactccagcctgggagacagagcgagacgcgagactccggctca >BE676626:1-500 (-) actccctcagtacattttaaacccagaaagacatcatttctaatgcctggtaacaccaacatttgcttagttttatttatatatttatcctttttgttgggcttcctgcattttttctactttttacttgggataatttgccttctgcctgaagaatatgagtgtgggtctgctggtgctgaattctgtcaatttttatttgccttggccaggcgcggtggctcgcgcctgtggtcccagcgctttgggaggccgagacgggcggatcacgaggtcgggagatcgagaccatcctggctgacgcggtgggaccctgtctctactaaacaaaatacaaaaaagttggctgggcgtggtgcgggcgcctgcggtcccagctgctcgggaggctgaaaggcgggggaatggcgtggacctggggggcggagcttgcagtgggccgggatcccaccactgcactccagcctgggagacagagcgagacgcgagactccggctca End editing Edited EST: AA149926, type: ag Aligns to: chr1:160955964-160956412 (--) All mismatches: ag (27), ag (65), ag (78), ag (94), ag (100), ag (117), ag (121), ag (126), ag (127), ag (149), ag (158), ag (159), ag (160), ag (162), ag (165), ag (166), ag (167), ag (168), ag (171), ag (205), ga (206), ag (216), ag (221), ag (228), ag (229), ag (233), ag (259), ag (260), ag (295), Editing mismatches: 28, all mismatches: 29, alignment length: 449, cluster length: 269, total number of As: 66 Locations in RNA: 27 65 78 94 100 117 121 126 127 149 158 159 160 162 165 166 167 168 171 205 216 221 228 229 233 259 260 295 Locations in genome: 160955990 160956028 160956041 160956057 160956063 160956080 160956084 160956089 160956090 160956112 160956121 160956122 160956123 160956125 160956128 160956129 160956130 160956131 160956134 160956168 160956179 160956184 160956191 160956192 160956196 160956222 160956223 160956258 Upstream nucleotide (in genome): c c g a c t c a t c a a c t a a a t t g c a a c c a c a Upstream nucleotide summary: a: 11, c: 10, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): a g g t g c g t a g a a a c a a a a c c g g a a g t a g Downstream nucleotide summary: a: 12, c: 4, g: 9, t: 3, other: 0 Dinucleotide summary: aa: 6, ac: 0, ag: 2, at: 3, ca: 4, cc: 0, cg: 6, ct: 0, ga: 0, gc: 1, gg: 1, gt: 0, ta: 2, tc: 3, tg: 0, tt: 0, other: 0 >chr1:160955964-160956412 (-) atccttccttgtcttgtactgttttgcaactctagaaagaaaagttaaatatgtagaagcctgacagtgatacaaatgatccctgttcatattaatacaaatgcaaattgtttgcctggtagagatacaattgattttctctctgtagaaaaaaagatgatcccagccaggcgtggtggctc-accctgcaattccagcactttgggaggccgagacaggcaaatcacaaggtcaggagttcgagaccagcctggccaatatggtgaaaccctgtctctactaaaaatacaaaaattagccaggcgtggtggtgggcgcctgtaatcccagctactctggagggtgaggcaggagaattgcttgaatctgggaggcggagtttgcagtgagctgagtcctcgccattgcattccagcttgggcaacagagtgagattacatctcaaaaaa >AA149926:1-449 (-) atccttccttgtcttgtactgttttgcaactctagaaagaaaagttaaatatgtagaagcctgacagtgatacaaatgatccctgttcatattaatacaaatgcaaattgtttgcctggtagagatacaattgattttctctctgtagaaaaaaggatgatcccagccaggcgtggtggctcna-cctgcggttccagcactttgggaggccgagacgggcggatcacagggtcgggagttcgaagccagcctggccaatatggtgaaaccctgtctctgctggggatgcgggaattagccgggcgtggtggtgggcgcctgtggtcccggctgctctggagggtgaggcgggagagttgcttgaatctggggggcggagtttgcggtgagctgagtcctcgccattgcattccagcttgggcgacagagtgagattacatctcaaaaaa End editing Edited EST: AA501379, type: ag Aligns to: chr1:226435378-226435793 (--) All mismatches: ag (35), ag (62), ag (69), ag (125), ag (134), ag (135), ag (141), ag (193), ag (194), ag (202), ag (218), ag (272), ag (278), ag (280), ag (288), ag (290), Editing mismatches: 16, all mismatches: 16, alignment length: 417, cluster length: 256, total number of As: 72 Locations in RNA: 35 62 69 125 134 135 141 193 194 202 218 272 278 280 288 290 Locations in genome: 226435411 226435438 226435445 226435501 226435510 226435511 226435517 226435569 226435570 226435578 226435594 226435648 226435654 226435656 226435664 226435666 Upstream nucleotide (in genome): c g g t a t c a a a c t t c c c Upstream nucleotide summary: a: 4, c: 6, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): a t g c t a c a a c a a c t g c Downstream nucleotide summary: a: 6, c: 5, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 1, ca: 2, cc: 2, cg: 1, ct: 1, ga: 0, gc: 0, gg: 1, gt: 1, ta: 2, tc: 2, tg: 0, tt: 0, other: 0 >chr1:226435378-226435793 (-) gtaagagtagactaggtaatttggattaaccttcctgctgtaaataactgtttcctctggaataaaatattaaaataacctgcttgaagaacactggagcattaacaaggcattaagaaggcctggcacagtggctcatacctgtaatcccagcactttgggaggccaaggcgagtggatcacttgaggtcacgagttcaagacaagcctggccaacatggcaaaaccctgtctctactgaaaataaaaaaaattagctgggtgtgataggtgtgcacctgtaatcccagctacttgggaggctgaggcaggagagtcgcttgaacccacgaagcagacattgcagtgagccaagattgtgccactgtactctagcctgggcaacagagcga-gactctgtctcaaaaaaaaaaaaa >AA501379:1-417 (-) gtaagagtagactaggtaatttggattaaccttcctgctgtaaataactgtttcctctggaataaaatattaaaataacctgcttgaagaacactggagcattaacaaggcattaagaaggcctggcgcggtggctcgtgcctgtgatcccagcactttgggaggccaaggcgagtggatcacttgaggtcacgagttcgagacaagcctggccagcatggcaggaccctgtctctactgaaaataaaaaaaattagctgggtgtgataggtgtgcgcctgtggtcccagctgcttgggaggctgaggcaggagagtcgcttgaacccacgaagcagacattgcagtgggccaaggttgtgccactgtactctagcctgggcgacagagcgatgactctgtctcaaaaaaaaaaaaa End editing Edited EST: AA501419, type: ag Aligns to: chr1:226435378-226435792 (--) All mismatches: ag (34), ag (61), ag (68), ag (124), ag (133), ag (134), ag (140), ag (192), ag (193), ag (201), ag (217), ag (271), ag (277), ag (279), ag (287), ag (289), Editing mismatches: 16, all mismatches: 16, alignment length: 415, cluster length: 256, total number of As: 72 Locations in RNA: 34 61 68 124 133 134 140 192 193 201 217 271 277 279 287 289 Locations in genome: 226435411 226435438 226435445 226435501 226435510 226435511 226435517 226435569 226435570 226435578 226435594 226435648 226435654 226435656 226435664 226435666 Upstream nucleotide (in genome): c g g t a t c a a a c t t c c c Upstream nucleotide summary: a: 4, c: 6, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): a t g c t a c a a c a a c t g c Downstream nucleotide summary: a: 6, c: 5, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 1, ca: 2, cc: 2, cg: 1, ct: 1, ga: 0, gc: 0, gg: 1, gt: 1, ta: 2, tc: 2, tg: 0, tt: 0, other: 0 >chr1:226435378-226435792 (-) taagagtagactaggtaatttggattaaccttcctgctgtaaataactgtttcctctggaataaaatattaaaataacctgcttgaagaacactggagcattaacaaggcattaagaaggcctggcacagtggctcatacctgtaatcccagcactttgggaggccaaggcgagtggatcacttgaggtcacgagttcaagacaagcctggccaacatggcaaaaccctgtctctactgaaaataaaaaaaattagctgggtgtgataggtgtgcacctgtaatcccagctacttgggaggctgaggcaggagagtcgcttgaacccacgaagcagacattgcagtgagccaagattgtgccactgtactctagcctgggcaacagagcgagactctgtctcaaaaaaaaaaaaa >AA501419:1-415 (-) taagagtagactaggtaatttggattaaccttcctgctgtaaataactgtttcctctggaataaaatattaaaataacctgcttgaagaacactggagcattaacaaggcattaagaaggcctggcgcggtggctcgtgcctgtgatcccagcactttgggaggccaaggcgagtggatcacttgaggtcacgagttcgagacaagcctggccagcatggcaggaccctgtctctactgaaaataaaaaaaattagctgggtgtgataggtgtgcgcctgtggtcccagctgcttgggaggctgaggcaggagagtcgcttgaacccacgaagcagacattgcagtgggccaaggttgtgccactgtactctagcctgggcgacagagcgagactctgtctcaaaaaaaaaaaaa End editing Edited EST: AA553577, type: ag Aligns to: chr1:150966127-150966409 (--) All mismatches: ag (23), ag (52), ag (81), ag (90), ag (100), ag (106), ag (113), ag (122), ag (123), ag (149), ag (151), ag (152), ag (157), ag (160), ag (161), ag (162), ag (185), ag (186), ag (187), ag (197), ag (211), Editing mismatches: 21, all mismatches: 21, alignment length: 282, cluster length: 190, total number of As: 54 Locations in RNA: 23 52 81 90 100 106 113 122 123 149 151 152 157 160 161 162 185 186 187 197 211 Locations in genome: 150966149 150966178 150966207 150966216 150966226 150966232 150966239 150966248 150966249 150966276 150966278 150966279 150966284 150966287 150966288 150966289 150966312 150966313 150966314 150966324 150966338 Upstream nucleotide (in genome): c g a a g a t a c t a a t a a a a a a c t Upstream nucleotide summary: a: 12, c: 3, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): a g c t g g c t a a t a c a a a t a a g g Downstream nucleotide summary: a: 9, c: 3, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 6, ac: 1, ag: 1, at: 4, ca: 2, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr1:150966127-150966409 (-) ggccaggcacagtggctcatgcctgtaatcccagcactttgggaggatgaggcgcgtggatcatctgaggtaggagttcgagaccagcctgaccaaaatggtgaaaccccgtctctactaaaaatacaaaaataagccaggcatggtggtgggtgcctgcaatcccagctacttggaaggctgaggcaggagaattgcttgaacccaggaggcggaggttgcagtgagctgagatcgcgccactgcactccaacctgggcaagaagagcaaaactccgtctca >AA553577:1-282 (-) ggccaggcacagtggctcatgcctgtaatcccagcactttgggaggatgaggcgcgtggatcatctgaggtgggagttcgagaccggcctgaccagggtggtgaaaccccgtctctactagggatgcaaaggtgagccaggcatggtggtgggtg-ctgcggtcccagctgcttggagggctggggcaggagagttgcttgagcccaggaggcggaggttgcagtgagctgggatcgcgccactgcactccaacctgggcgagaagagcaaaactccgtctca End editing Edited EST: AA702213, type: ag Aligns to: chr1:70745197-70745572 (--) All mismatches: ag (40), ag (63), ag (89), ag (99), ag (101), ag (103), ag (126), ag (127), ag (182), ag (192), ag (197), ag (202), ag (226), Editing mismatches: 13, all mismatches: 13, alignment length: 374, cluster length: 188, total number of As: 56 Locations in RNA: 40 63 89 99 101 103 126 127 182 192 197 202 226 Locations in genome: 70745236 70745260 70745286 70745296 70745298 70745300 70745323 70745324 70745379 70745389 70745394 70745399 70745423 Upstream nucleotide (in genome): c a g a g c a t a a c c c Upstream nucleotide summary: a: 5, c: 5, g: 2, t: 1, other: 0 Downstream nucleotide (in genome): g c a t a g t a c c g g c Downstream nucleotide summary: a: 3, c: 4, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 3, ag: 0, at: 2, ca: 0, cc: 1, cg: 4, ct: 0, ga: 2, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr1:70745197-70745572 (-) aaagacagatttataagggaaaagcaaacaagtttattaatgcgtgccgcacaccacacaagaaaccccaaggaaaagtaactcaagggctgatcacagtggcttatgcctgtaatcccagcactttgggaggctgagttgggcagatcacttgaggccaggagtttgagaccagcccagccaacatggtgaaaccccatctctattaaaaatacaaaaattagctgggcttgatgatgcacacctgtaatcccaactcaggaggctgaggcagaaatattgcttgaacctgggaggcggaggttgcagtgaaccgagattgtgccactgcactccagcctgggtaacagagcaagactatgtctcaaaaaaaaaa >AA702213:1-374 (-) aaagacagatttataagggaaaagcaaacaagtttattaatg-gtgccgcacaccacacaagaaaccccaaggaaaagtaactcaagggctgatcacagtggcttatgcctgtaatcccagcactttgggaggctgagttgggcagatcgcttgaggccaggagtttgagaccggcccggccagcatggtgaagccccatctctattaaaaatacaaaaattagctgggcttgatgatgcacacctgtggtcccaactcaggaggctgaggcgggagtattgcttggacctgggaggcggaggttgcagtgagccgagattg-gccactgcactccggcctgggtaacagagcaagactatgtctcaaaaaaaaaa End editing Edited EST: AA719584, type: ag Aligns to: chr1:70745197-70745526 (--) All mismatches: ag (40), ag (63), ag (89), ag (99), ag (101), ag (103), ag (126), ag (127), ag (182), ag (192), ag (197), ag (202), ag (226), Editing mismatches: 13, all mismatches: 13, alignment length: 329, cluster length: 188, total number of As: 56 Locations in RNA: 40 63 89 99 101 103 126 127 182 192 197 202 226 Locations in genome: 70745236 70745260 70745286 70745296 70745298 70745300 70745323 70745324 70745379 70745389 70745394 70745399 70745423 Upstream nucleotide (in genome): c a g a g c a t a a c c c Upstream nucleotide summary: a: 5, c: 5, g: 2, t: 1, other: 0 Downstream nucleotide (in genome): g c a t a g t a c c g g c Downstream nucleotide summary: a: 3, c: 4, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 3, ag: 0, at: 2, ca: 0, cc: 1, cg: 4, ct: 0, ga: 2, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr1:70745197-70745526 (-) ccgcacaccacacaagaaaccccaaggaaaagtaactcaagggctgatcacagtggcttatgcctgtaatcccagcactttgggaggctgagttgggcagatcacttgaggccaggagtttgagaccagcccagccaacatggtgaaaccccatctctattaaaaatacaaaaattagctgggcttgatgatgcacacctgtaatcccaactcaggaggctgaggcagaaatattgcttgaacctgggaggcggaggttgcagtgaaccgagattgtgccactgcactccagcctgggtaacagagcaagactatgtctcaaaaaaaaaa >AA719584:1-329 (-) ccgcacaccacacaagaaaccccaaggaaaagtaactcaagggctgatcacagtggcttatgcctgtaatcccagcactttgggaggctgagttgggcagatcgcttgaggccaggagtttgagaccggcccggccagcatggtgaagccccatctctattaaaaatacaaaaattagctgggcttgatgatgcacacctgtggtcccaactcaggaggctgaggcgggagtattgcttggacctgggaggcggaggttgcagtgagccgagattg-gccactgcactccggcctgggtaacagagcaagactatgtctcaaaaaaaaaa End editing Edited EST: DB302586, type: ag Aligns to: chr20:5063591-5064006 (--) All mismatches: ag (5), ag (11), ag (36), ag (59), ag (99), ag (152), ag (157), ag (177), ag (178), ag (179), ag (187), ag (211), ag (221), ag (230), ag (239), ag (256), Editing mismatches: 16, all mismatches: 16, alignment length: 416, cluster length: 252, total number of As: 68 Locations in RNA: 5 11 36 59 99 152 157 177 178 179 187 211 221 230 239 256 Locations in genome: 5063595 5063601 5063626 5063649 5063689 5063742 5063747 5063767 5063768 5063769 5063777 5063801 5063811 5063820 5063829 5063846 Upstream nucleotide (in genome): c a c a g a t a a g a c c c a a Upstream nucleotide summary: a: 8, c: 5, g: 2, t: 1, other: 0 Downstream nucleotide (in genome): t a c t g a c c a a t g t g g t Downstream nucleotide summary: a: 4, c: 3, g: 4, t: 5, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 1, at: 3, ca: 0, cc: 1, cg: 2, ct: 2, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr20:5063591-5064006 (-) agagagagaactgtttttctttctctttcttctattaaacctctgctcctaaaaaaaaaaaaaaaaaaaaaaaaatctccctaaccaacttcaaaaagatgggccctaacatcatcaagtatatgaagaattaggccgggtgcggtggctcacgcctgtaatcccagcactttgggaagctgaggcaggcggctcatatgaggtcaggagttcgagaccagcatggccaatgtggtgaaaccccatctctactaaaaatacaaaaattagccagttgtggtggtgcacgcctgtaatcccagctactcttgaggctgaggcaggagaatcgcttgaacccgggaggtggaggttgcaatgagccgagatcgcgccattgcactacagcctgggcgacaagagtgaaactccatctg >DB302586:1-416 (-) agagagagaactgtttttctttctctttcttctattaaacctctgctcctaaaaaaaaaaaaaaaaaaaanannatctccctaaccaacttcaaaaagatgggccctaacatcatcaagtatatgaagaattaggccgggtgcggtggctcacgcctgtagtcccagcactttgggaggctgaggcgggcggctcgtatgaggtcgggagttcgagaccagcatggccagtgtggtggggccccatctctactaaaaatgcaaagattagccagttgtggtggtgcacgcctgtaatcccagctactcttgaggctggggcaggagaatcgcttgaacccgggaggtggaggttgcagtgagccgagatcgcgccattgcgctacagcctgggcgacaagagtgagactccgtctg End editing Edited EST: AA551091, type: ag Aligns to: chr20:33798516-33798933 (--) All mismatches: ag (26), ag (38), ag (61), ag (63), ag (73), ag (77), ag (97), ag (98), ag (107), ag (112), ag (129), ag (138), ag (139), ag (160), ag (164), ag (170), ag (173), ag (193), ag (216), gt (217), ag (227), ag (252), ag (256), ag (264), ag (273), ag (281), gc (285), ag (290), ag (295), Editing mismatches: 27, all mismatches: 29, alignment length: 417, cluster length: 272, total number of As: 72 Locations in RNA: 26 38 61 63 73 77 97 98 107 112 129 138 139 160 164 170 173 193 216 227 252 256 264 273 281 290 295 Locations in genome: 33798540 33798553 33798576 33798578 33798588 33798592 33798612 33798613 33798622 33798627 33798644 33798653 33798654 33798676 33798680 33798686 33798689 33798709 33798732 33798743 33798768 33798772 33798780 33798789 33798797 33798807 33798811 Upstream nucleotide (in genome): c a c c g c a g g c t a t c t a t a g c c g c t c c c Upstream nucleotide summary: a: 5, c: 12, g: 5, t: 5, other: 0 Downstream nucleotide (in genome): t g c c g g c a a g c t a g g a c c c g g g c a c t g Downstream nucleotide summary: a: 5, c: 9, g: 10, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 1, at: 1, ca: 0, cc: 4, cg: 6, ct: 2, ga: 2, gc: 1, gg: 2, gt: 0, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr20:33798516-33798933 (-) gaaattcatttccagatcctcaacttccagatgtactccacctgagaaagttcctggggttgaggctccaagccgactttttcttcataattgtagttctgctagtcttcataagaaaggccaggc-atggtggctcacgcctgtaatcccagcactttgggaggcagaggtgagtggatcacctgaggtcaggacttcaagaccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaattagtcaggcacagtggcacgtgccagtaatcgcagctactggggaggctgaggcaggagaatcgcttgaaccctggaggtggaggttgcagtgagccgagatcacaccattgctctctagcctgggcaagagtgagactccatctcagagaaaaaaaaaaaaa-tgg >AA551091:1-417 (-) gaaattcatttccagatcctcaacttccagatgtactccacctgagaaagttcctggggttgaggctccaagccgactttttcttcataattgtagttctgctagtcttcataagaaaggccgggctgtggtcg-tcgcgcctgtgatcccagcgctttggggggcggaggtgagtggatcacctgaggtcgggacttcaatgccagcctggccaacatggtgaagccctgtctctactaaaaatgcagaaattggtcgggcacagtg-cacgtgccagtggtcgcagctgctggggaggctgaggcgggaggatcgcttgggccctggaggtggaggttgcggtgggccgagatcgcgccattgctctctagcctgggcaggagtgaga-tccgtctcagagaaaaaaaaaaaaaatgg End editing Edited EST: DB302742, type: ag Aligns to: chr21:48004626-48005197 (--) All mismatches: ag (82), ag (83), ag (120), ag (146), ag (149), ag (154), ag (160), ag (176), ag (177), ag (182), ag (186), ag (187), ag (210), ag (253), Editing mismatches: 14, all mismatches: 14, alignment length: 572, cluster length: 172, total number of As: 47 Locations in RNA: 82 83 120 146 149 154 160 176 177 182 186 187 210 253 Locations in genome: 48004707 48004708 48004745 48004771 48004774 48004779 48004785 48004801 48004802 48004807 48004811 48004812 48004835 48004878 Upstream nucleotide (in genome): a g t t a c a a a c a t c a Upstream nucleotide summary: a: 7, c: 3, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): c a g g t a a c a g c a g t Downstream nucleotide summary: a: 5, c: 3, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 0, at: 2, ca: 1, cc: 0, cg: 2, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 0 >chr21:48004626-48005197 (-) cctgctgctataaagataatcatgtgggcttttttattctattgatatggcatatattaattttcaaatattaaaccaatcttggattcctggaataaattccacttggtcttagtgtccaattctttttatatgttgctggatttcattttagtattttgttggatttgtctgttcatattcataagagatactggtctgtagttttcttgtgatgtttggttttggtatcagataatactggcttcataaactgagtgttccctcttcaatttttaagaatattttgtgaggctgggcgcagtggctcatgcctgtaatcccagcactttgggaggccgaggcgggtggatcatgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatacaaaaaattagctgggcgtggtggtgcatgcctgtagtccctgttaggaggctgaggcaggagaatggtgtgaacccgggaggtggagcttgcagtgagccaagattgtgccactgcactccatcctgggtgacagagcgagactccatctcaag >DB302742:1-572 (-) cctgctgctataaagataatcatgtgggcttttttattctattgatatggcatatattaattttcaaatattaaaccaatcttggattcctggaataaattccacttggtcttagtgtccaattctttttatatgttgctggatttcattttagtattttgttggatttgtctgttcatattcataagagatactggtctgtagttttcttgtgatgtttggttttggtatcagataatactggcttcataaactgagtgttccctcttcaatttttaagaatattttgtgaggctgggcgcagtggctcatgcctgtagtcccagcactttgggaggccgaggcgggtggatcatgaggtcgggagatcgagaccatcctggctggcacggtgaggccccatctctactaagaatacgaaaagttggctgggcgtggtggtgcatgcctgtggtccctgttaggaggctgaggcaggagaatggtgtgggcccgggaggtggagcttgcagtgagccaagattgtgccactgcactccatcctgggtgacagagcgagactccatctcaag End editing Edited EST: DB308752, type: ag Aligns to: chr21:48004616-48005168 (--) All mismatches: ag (18), ag (25), ag (31), ag (48), ag (53), ag (63), ag (68), ag (85), ag (92), ag (93), ag (104), ag (130), ag (156), ag (163), ag (164), ag (166), ag (170), ag (171), ag (187), ag (225), ag (241), ag (263), ag (264), ag (272), ta (363), tc (495), Editing mismatches: 24, all mismatches: 26, alignment length: 553, cluster length: 255, total number of As: 65 Locations in RNA: 18 25 31 48 53 63 68 85 92 93 104 130 156 163 164 166 170 171 187 225 241 263 264 272 Locations in genome: 48004633 48004640 48004646 48004663 48004668 48004678 48004683 48004700 48004707 48004708 48004719 48004745 48004771 48004778 48004779 48004781 48004785 48004786 48004802 48004840 48004856 48004878 48004879 48004887 Upstream nucleotide (in genome): c g c c c a g g a g g t t a c t a a a g g a t c Upstream nucleotide summary: a: 7, c: 6, g: 7, t: 4, other: 0 Downstream nucleotide (in genome): t g g c c g g g c a g g g a a c a a a g g t a t Downstream nucleotide summary: a: 7, c: 4, g: 10, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 1, at: 1, ca: 1, cc: 2, cg: 1, ct: 2, ga: 1, gc: 0, gg: 6, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr21:48004616-48005168 (-) ttttttattctattgatatggcatatattaattttcaaatattaaaccaatcttggattcctggaataaattccacttggtcttagtgtccaattctttttatatgttgctggatttcattttagtattttgttggatttgtctgttcatattcataagagatactggtctgtagttttcttgtgatgtttggttttggtatcagataatactggcttcataaactgagtgttccctcttcaatttttaagaatattttgtgaggctgggcgcagtggctcatgcctgtaatcccagcactttgggaggccgaggcgggtggatcatgaggtcaggagatcgagaccatcctggctaacacagtgaaaccccatctctactaaaaatacaaaaaattagctgggcgtggtggtgcatgcctgtagtccctgttaggaggctgaggcaggagaatggtgtgaacccgggaggtggagcttgcagtgagccaagattgtgccactgcactccatcctgggtgacagagcgagactccatctcaagaaaagaaaag >DB308752:1-553 (-) ttttttattctattgatatggcatatattaattttcaaatattaaaccaatcttggatccctggaataaattccacttggtcttagtgtccaattctttttatatgttgctggatttcattttagtattttgttggatttgtctgttcatattcataagagatactggtctgtagttttcttgtgatgttaggttttggtatcagataatactggcttcataaactgagtgttccctcttcaatttttaagaatattttgtgaggctgggcgcagtggctcgtgcctgtggtcccagcactttgggaggccggggcgggtggatcatggggtcaggagatcgagaccatcctggctaacacagtgagaccccatctctactaggaatgcggaaaattggctgggcgtggtggtgcatgcctgtggtccctgttaggaggctgaggcaggggaatggtgtgggcccggggggtggagcttgcagtgggccaggattgtgccgctgcgctccatcctgggtgacggagcgggactccgtctcaagaaaagaaaag End editing Edited EST: DW436311, type: ag Aligns to: chr21:34136011-34136257 (--) All mismatches: ag (35), ag (47), ag (48), ag (75), ag (79), ag (80), ag (81), ag (109), ag (124), ag (126), ag (129), ag (168), ag (170), ag (171), ag (193), ag (217), ag (227), ag (236), ag (241), ag (249), Editing mismatches: 20, all mismatches: 20, alignment length: 248, cluster length: 215, total number of As: 42 Locations in RNA: 35 47 48 75 79 80 81 109 124 126 129 168 170 171 193 217 227 236 241 249 Locations in genome: 34136040 34136052 34136053 34136080 34136084 34136085 34136086 34136114 34136129 34136131 34136134 34136173 34136175 34136176 34136198 34136222 34136232 34136241 34136246 34136254 Upstream nucleotide (in genome): t a a c a a c c g t t c a t c c c c c c Upstream nucleotide summary: a: 5, c: 10, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): c g a g c a a t g g g g c a g g c c g c Downstream nucleotide summary: a: 4, c: 6, g: 9, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 1, at: 0, ca: 1, cc: 3, cg: 5, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr21:34136011-34136257 (-) ggcacgatctcagctcactgcacccaccgcctcccaggttcaagcgattctcctgcctcagcctcctgagtagctgggactaacaggcgtgcaccaccatacccagctgatttttgtatttttagtagagatggggtttctccatgttggccaggctcgtcttgaactcccaaactcaggtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccactgcacccggcc-taat >DW436311:5-252 (-) ggcgcgatctcggctcgctgcacccgccgcctcccgggttcaagcgattctcctgcctcggcctcctgagtagctgggactggcgggcgtgcaccaccatacccagctgatttttgtatttttggtggggatggggtttctccgtgttggccaggctcgtcttgaactcccgggctcgggtgatccgcctgcctcggcctcccagggtgctgggattgcaggcgtgagccactgcacccggccgtaat End editing Edited EST: DB345532, type: ag Aligns to: chr22:21113712-21114235 (--) All mismatches: ag (239), ag (281), ag (313), ag (317), ag (321), ag (322), ag (323), ag (360), ag (363), ag (377), ag (384), ag (388), at (392), ag (398), ag (421), Editing mismatches: 14, all mismatches: 15, alignment length: 524, cluster length: 183, total number of As: 53 Locations in RNA: 239 281 313 317 321 322 323 360 363 377 384 388 398 421 Locations in genome: 21113950 21113992 21114024 21114028 21114032 21114033 21114034 21114071 21114074 21114088 21114095 21114099 21114109 21114132 Upstream nucleotide (in genome): a t a t a a t g c c c c g c Upstream nucleotide summary: a: 4, c: 5, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): c g a c a a a c a a g g g c Downstream nucleotide summary: a: 6, c: 4, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 0, at: 0, ca: 2, cc: 1, cg: 2, ct: 0, ga: 0, gc: 1, gg: 1, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr22:21113712-21114235 (-) caggtagatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaaataaaaaaattggctgggtgcggtgactcacacttgtaatcccagcactttgagaggccgaggcaggcagatcacaaggtcaggagatcaagaccgtcctggctaacacggtgaaaccctgtctctactaaaaatacaaaaaattagccgggcgtggtggcctgcgcctgtagtcccagctactcgggaggctgagacaggagaatggcatgaacccgggaggtggagcttgcagtgagtggagttcacgcaactgtactccagccttggtgacagagtgagactctgtctcaaaaataaataaataagccgagcgtggtggtgcacgcctgtagtcccagctgctggggaggctgaggcaggagaattgcttgaacctgggagacggaggttgaggtgagccgagatcgtgcctcagcactccatcctgggtgacagagagactctgtctc >DB345532:1-524 (-) caggtagatcacctgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccgtctctactaaaaataaaaaaattggctgggtgcggtgactcacgcttgtaatcccagcactttgaggggccgtggcgggcggatcacgaggtcaggagatcgaggccgtcctggctaacacggtgaaaccctgtctctactgggaatgcaagaaattagccgggcgtggtggcctgcgcctgtggtcccagctactcgggaggctgagacaggagaatggcatgagcccgggaggtggagcttgcagtgagtggagttcacgcaactgtactccagccttggtgacagagtgagactctgtctcaaaaataaataaataagccgagcgtggtggtgcacgcctgtagtcccagctgctggggaggctgaggcaggagaattgcttgaacctgggagacggaggttgaggtgagccgagatcgtgcctcagcactccatcctgggtgacagagagactctgtctc End editing Edited EST: BE466467, type: ag Aligns to: chr22:24865565-24866030 (--) All mismatches: ag (11), ag (79), ag (80), ag (83), ag (88), ag (98), ag (104), ag (111), ag (147), ag (152), ag (162), ag (179), ag (188), ag (189), ag (212), ag (233), ag (255), ag (256), Editing mismatches: 18, all mismatches: 18, alignment length: 467, cluster length: 246, total number of As: 63 Locations in RNA: 11 79 80 83 88 98 104 111 147 152 162 179 188 189 212 233 255 256 Locations in genome: 24865575 24865643 24865644 24865647 24865652 24865662 24865668 24865675 24865711 24865716 24865726 24865743 24865752 24865753 24865776 24865797 24865819 24865820 Upstream nucleotide (in genome): a a g c a g g t t a a a a c c g a t Upstream nucleotide summary: a: 8, c: 3, g: 4, t: 3, other: 0 Downstream nucleotide (in genome): a c a t t g g c g a a g c a g g t a Downstream nucleotide summary: a: 6, c: 3, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 1, at: 2, ca: 1, cc: 0, cg: 1, ct: 1, ga: 1, gc: 0, gg: 3, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr22:24865565-24866030 (-) ggctgcagtgaaccattatcatgccactgcagtccagcctgggtgatacagcgagaccctttctc-aaaaaaaaaaaaaagactagaaacaagatattcatcaataagataactcattaaataaagtgtgataggtccctccagtgggcttctatgtagaagtggaaaagaatgcagtaaatcgaggctgggcgcggtggctcatgcctgtaatcccagcactttgggaggctgaggcgggcggatcacgaggtcaggagattgagaccagcctggccaacatggtgaagcctggtctctactaaaaatacaaaaaaattagccgagcgtggtggtgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatggcatgaacctgggaggcggagcttgcagtgagtcaatatcgtgccactgcactccagcctgggtgacagagcgaaactccttctc >BE466467:1-467 (-) ggctgcagtgaaccattatcatgccactgcagtccagcntgggtgatacagcgagaccctttctcaaaaaaaaaaaaaaagactagaaacaagatattcatcaataagataactcattaaataaagtgtgataggtccctccagtgggcttctatgtagaagtggaaaagaatgcagtaaatcgaggctgggcgcggtggctcatgcctgtggtcccagcactttgggaggctggggcgggcggatcacgaggtcgggagattgagaccagcctggccggcatggtgaggcctggtctctactaagaatacaaaagaattggccgagcgtggtggtgggtgcctgtagtcccagctgctcggggggctggggcaggagagtggcgtgggcctgggaggcggagcttgcagtgagtcaatatcgtgccactgcactccagcctgggtgacagagcgagactccttctc End editing Edited EST: AI301057, type: ag Aligns to: chr22:32036878-32037413 (--) All mismatches: ag (64), ag (69), ag (89), ag (93), ag (108), ag (112), ag (129), ag (134), ag (135), ag (161), ag (168), ag (214), ag (222), Editing mismatches: 13, all mismatches: 13, alignment length: 536, cluster length: 159, total number of As: 45 Locations in RNA: 64 69 89 93 108 112 129 134 135 161 168 214 222 Locations in genome: 32036941 32036946 32036966 32036970 32036985 32036989 32037006 32037011 32037012 32037038 32037045 32037091 32037099 Upstream nucleotide (in genome): g g c a c g c a t t a a c Upstream nucleotide summary: a: 4, c: 4, g: 3, t: 2, other: 0 Downstream nucleotide (in genome): g g g c g g g t a g a g g Downstream nucleotide summary: a: 2, c: 1, g: 9, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 1, ca: 0, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 3, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr22:32036878-32037413 (-) atgctgcctgcccataagtcacttagtagccatctcagttaccgtatcagctgtcgtggtattctggtgcttgtgttcaggtcacccttatttggcttaacactggccccaaagtgcaataatagcaattctggcaatttggattgccgaagagaaagtggtaaagtgccttctttaagtgaaaatgtgaaagttctggacttcaaaaggaaagaaaaaaaatcatatgctgattttgataagatctatggtaagagtgaatcttttatccgttagttgagcatgatgtcgaggtgggtggatcacctgaggtcaggagttaagaccagcccgaccaacatggtggaacccctcttctactaaatacaaaaaattagccgggagtggtggtgcatacttgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccgagattgcgccattgcactccagcctgggcagcaagagtgaaactccatctcaaaaaaaaaaaaa >AI301057:1-536 (-) atgctgcctgcccataagtcacttagtagccatctcagttaccgtatcagctgtcgtggtattctggtgcttgtgttcaggtcacccttatttggcttaacactggccccaaagtgcaataatagcaattctggcaatttggattgccgaagagaaagtggtaaagtgccttctttaagtgaaaatgtgaaagttctggncttcaaaaggaaagaaaaaaaatcatatgctgattttgataagatctatggtaagagtgaatcttttatccgttagttgagcatgatgtcgaggtgggtggatcacctgaggtcgggagttaggaccagcccgaccaacatggtggaacccctcttctactaaatacagaaaattggccgggagtggtggtgcatacttgtggtcccggctacttgggaggctggggcgggagaatcgcttgagcccgggaggtggaggttgcagtgggccgggattgcgccattgcactccagcctgggcagcaagagtgaaactccatctcaaaaaaaaaaaaa End editing Edited EST: DB350454, type: ag Aligns to: chr2:10713339-10713658 (--) All mismatches: ag (12), ag (13), ag (18), ag (42), ag (67), ag (87), ag (93), ag (114), ag (120), ag (146), ag (149), ag (164), ag (183), ag (195), ag (206), ag (208), ag (213), ag (214), ag (215), ag (217), ag (230), ag (231), ag (239), ag (252), ag (253), Editing mismatches: 25, all mismatches: 25, alignment length: 320, cluster length: 242, total number of As: 68 Locations in RNA: 12 13 18 42 67 87 93 114 120 146 149 164 183 195 206 208 213 214 215 217 230 231 239 252 253 Locations in genome: 10713350 10713351 10713356 10713380 10713405 10713425 10713431 10713452 10713458 10713484 10713487 10713502 10713521 10713533 10713544 10713546 10713551 10713552 10713553 10713555 10713568 10713569 10713577 10713590 10713591 Upstream nucleotide (in genome): a c c t c a c c t t a t c c g a a a c c a c t a t Upstream nucleotide summary: a: 8, c: 10, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): g a g c g t g g g g t c t t g g g a a c g a g t a Downstream nucleotide summary: a: 5, c: 3, g: 12, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 4, at: 3, ca: 3, cc: 1, cg: 4, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 3, tt: 0, other: 0 >chr2:10713339-10713658 (-) gatgcatgtgttttgttaggtgtgtagaaaatacagatcctggctgggcacggtggcgcacgcctgtaatcccagcactttaggaggccaaggtgggtggatcacaaagtcaagagatcgagaccatcctggacaacatggtgaaaccccatctctactaaaaatacaaaaattagccgggcgtggtggcgggtgcctgtagtcccagctactctggaggctgaggcaggggaatcgcttgaatccgggaggcagaggttgcagtgagtcgagattgtaccattgcactccagcctggcaacagagcaagactccatctc >DB350454:1-320 (-) gatgcntgtgttttgttaggtgtgtagaaaatacagatcctggctgggcacggtggcgcacgcctgtggtcccagcactttgggaggccggggtgggtggatcgcggggtcaggggatcgagaccgtcctggacaacgtggtgaaaccccatctctgctaaaaatacaaaagttggccgggcgtggtggcgggtgcctgtggtcccggctactctggaggctgaggcgggggagtcgcttgaatccgggaggcggaggttgcagtgagtcgagattgtgccattgcactccagcctggcaacggagcgggactccatctc End editing Edited EST: DB299532, type: ag Aligns to: chr2:11328253-11328522 (--) All mismatches: ag (27), ag (45), ag (52), ag (57), ag (58), ag (121), ag (122), ag (148), ag (178), ag (186), ag (198), ag (204), ag (231), ag (236), ct (254), ag (258), ag (264), Editing mismatches: 16, all mismatches: 17, alignment length: 271, cluster length: 237, total number of As: 67 Locations in RNA: 27 45 52 57 58 121 122 148 178 186 198 204 231 236 258 264 Locations in genome: 11328279 11328297 11328304 11328309 11328310 11328373 11328374 11328400 11328429 11328437 11328449 11328455 11328482 11328487 11328509 11328515 Upstream nucleotide (in genome): t c g a t a t t a g a c c c t c Upstream nucleotide summary: a: 4, c: 5, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): g c g g a t a g c t g a g a a c Downstream nucleotide summary: a: 5, c: 3, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 1, ca: 2, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 1, ta: 3, tc: 0, tg: 2, tt: 0, other: 0 >chr2:11328253-11328522 (-) ggctcacacctgtaatcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagttcaagacaagcctggccaagatggtgaaaccccatctctactaaaaatacaaaaa-ttagccaggcgtggtgtcaggcgcctgtaatcccagctactggggaggctgaggcagagaattgcttgaacccaggaggtggaggttgcagtaagccgagatcgcaccactgcactccaacctaggcaacagagcgagactccgtcacac >DB299532:1-271 (-) ggctcacgcctgtgatctcagcactttgggaggccgaggcgggtggatcacctgaggtcaggagttcgagacaggcctggccaaggtggtgaagccccatctctactaaaaatacaaaaaattggccaggcgtggtgtcaggcgcctgtggtcccagctactggggaggctgaggcagagaattgcttgaacccaggaggtggaggttgcagtgggccgggatcgcgccactgcactccaacctgggcaacagagcgagactccgtcacac End editing Edited EST: DB347049, type: ag Aligns to: chr2:61586938-61587464 (--) All mismatches: ag (79), ag (98), ag (111), ag (121), ag (147), ag (156), ag (158), ag (159), ag (162), ag (165), ag (182), ag (186), ag (187), ag (196), ag (201), ag (202), ag (210), ag (236), Editing mismatches: 18, all mismatches: 18, alignment length: 528, cluster length: 158, total number of As: 42 Locations in RNA: 79 98 111 121 147 156 158 159 162 165 182 186 187 196 201 202 210 236 Locations in genome: 61587016 61587035 61587048 61587058 61587084 61587093 61587095 61587096 61587099 61587102 61587119 61587123 61587124 61587133 61587138 61587139 61587147 61587173 Upstream nucleotide (in genome): a g t t t t a a t t t a c c a c c a Upstream nucleotide summary: a: 6, c: 4, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): c g c g g g t a a c g c a g g a g g Downstream nucleotide summary: a: 4, c: 4, g: 9, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 2, at: 1, ca: 2, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 4, tt: 0, other: 0 >chr2:61586938-61587464 (-) agttctaacagttttctgttgttgtggagttgtaaggtttttctacatatatatgatcatttgtaaaaagataatttttctttcctgttttctatttggagtccttttattccttaagtcttctctcttggaatttcagtattaaattgaataggagtgg-taatactggggcatccttgcctttcctggatcttagaggaaaagctttcagtttttccttactgatttatgctattatttgtgtgctttatatatgaaaaaaagctggccaggcatcccagcattttgggaagctgaggcgggtggatcgtgaggtcaggagttcaagaccagcctggccaacatagtgaaacctcgtttctactaaaaatagaaaaattagcctggtgtggtggtgggcgcctgtagtcccagctacttggcaggctgagacaggagaattgcttgaacctgggaggcagaggttgcagtgagccgagatcacccagccgagcactttaggctgggtgacagagtgagactgtctc >DB347049:1-528 (-) agttctaacagttttctgttgttgtggagttgtaaggtttttctacatatatatgatcatttgtaaaaagataatttttctttcctgttttctatttggagtccttttattccttaagtcttctctcttggaatttcagtattaaattgaataggagtggttaatactggggcatccttgcctttcctggatcttagaggaaaagctttcagtttttccttactgatttatgctattatttgtgtgctttatatatgaaaaaaagctggccaggcatcccagcattttgggaggctgaggcgggtggatcgtgaggtcgggagttcgggaccggcctggccggcatggtgaaacctcgtttctgctgaaggtggaaaaattggcctggtgtggtggtgggcgcctgtggtcccagctgcttggcaggctgggacaggagaattgcttgagcctgggaggcagaggttgcagtgagccgagatcacccagccgagcactttaggctgggtgacagagtgagactgtctc End editing Edited EST: DB348721, type: ag Aligns to: chr2:64232256-64232783 (--) All mismatches: ag (35), ag (55), ag (79), ag (94), ag (111), ag (121), ag (127), ag (147), ag (150), ag (153), ag (157), ag (161), ag (177), ag (187), ag (206), ag (216), ag (232), ag (249), ag (255), Editing mismatches: 19, all mismatches: 19, alignment length: 528, cluster length: 221, total number of As: 56 Locations in RNA: 35 55 79 94 111 121 127 147 150 153 157 161 177 187 206 216 232 249 255 Locations in genome: 64232290 64232310 64232334 64232349 64232366 64232376 64232382 64232402 64232405 64232408 64232412 64232416 64232432 64232442 64232461 64232471 64232487 64232504 64232510 Upstream nucleotide (in genome): c g a c t t c t a a t a a a g a g c t Upstream nucleotide summary: a: 7, c: 4, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): a g c g c g c g t a c a c c t g g g a Downstream nucleotide summary: a: 4, c: 6, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 1, at: 1, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 2, gt: 1, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr2:64232256-64232783 (-) tcagtagtgtcaaagttgaaaaactctgccctaactggattttagcatttcctttaattaggaatataagaaacgcttcatggatacagtatggacagtacatttacagtacctgtagctttgtcaccaatagaaatctcaggtattctcatatcacattcaattgctacagatatcttaagatttaatttatgctcatttattgcctataaggtagttactagattcgtattaagaagcaatagtaggctgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcggatcacaaggtcaggagatcgagaccatcttggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgcggtggcgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacctgggaggcggagcttgcagtgagccgagattgtgccactgcaatctggcctgggctaaagagcgggactccgtctc >DB348721:1-528 (-) tcagtagtgtcaaagttgaaaaactctgccctaactggattttagcatttcctttaattaggaatataagaaacgcttcatggatacagtatggacagtacatttacagtacctgtagctttgtcaccaatagaaatctcaggtattctcatatcacattcaattgctacagatatcttaagatttaatttatgctcatttattgcctataaggtagttactagattcgtattaagaagcaatagtaggctgggcgcggtggctcacgcctgtgatcccggcactttgggaggccggggcgggcggatcacagggtcaggaggtcgagaccatcttggctagcacggtgaagccccgtctctactaagaatgcaagaagttggccgggcgcggtggcgggcgcctgtggtcccagctgctcgggaggctgaggcgggagaatggcgtgagcctgggaggcggagcttgcagtgggccgagattgtgccactgcgatctggcctgggctaaagagcgggactccgtctc End editing Edited EST: CB962316, type: ag Aligns to: chr2:232599275-232599555 (--) All mismatches: ag (5), ag (15), ag (21), ag (43), ag (59), ag (88), ag (93), ag (167), ag (208), ag (221), ag (232), ag (243), ag (246), ag (282), Editing mismatches: 14, all mismatches: 14, alignment length: 282, cluster length: 277, total number of As: 53 Locations in RNA: 5 15 21 43 59 88 93 167 208 221 232 243 246 282 Locations in genome: 232599279 232599289 232599295 232599317 232599333 232599362 232599367 232599440 232599481 232599494 232599505 232599516 232599519 232599555 Upstream nucleotide (in genome): c c t c c t c g c a c t c n Upstream nucleotide summary: a: 1, c: 8, g: 1, t: 3, other: 1 Downstream nucleotide (in genome): t t c g t g t g g c g g g g Downstream nucleotide summary: a: 0, c: 2, g: 8, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 0, ca: 0, cc: 0, cg: 4, ct: 4, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 1 >chr2:232599275-232599555 (-) agacggagtctcgctctgtcgcccaggctggagtgcagtagcatgatcccagctcactgcaacctccgcctcccaggttcacgccattctcctgcctcagcctcctgagtagctgagactacaggcacccgccaccacgcccggctattttttt-ttttttatatttttagtacagacggggtttcaccatgttagccaggatggtctcgatctcctgacctcatgatctgcccgcctcagcctcccaaagtgctgggattacaggcatgagccaccatgcc >CB962316:1-282 (-) ggacggagtctcgctctgtcgcccaggctggagtgcggtggcatgatcccggctcactgcagcctccgcctcccgggttcacgccattctcctgcctcagcctcctgagtagctgggactacaggcacccgccaccacgcccggctatttttttcttttttatatttttagtacagacggggtttcaccgtgttggccaggatggtctcgatctcctgacctcgtgatctgcccgcctcggcctcccaaagtgctgggattgcaggcgtgagccaccgtgcc End editing Edited EST: BE152024, type: ag Aligns to: chr2:24560342-24560538 (--) All mismatches: ag (26), ag (31), ag (32), ag (58), ag (99), ag (100), ag (114), ag (123), ag (136), ag (140), ag (161), ag (166), ga (213), Editing mismatches: 12, all mismatches: 13, alignment length: 198, cluster length: 140, total number of As: 41 Locations in RNA: 26 31 32 58 99 100 114 123 136 140 161 166 Locations in genome: 24560352 24560357 24560358 24560384 24560424 24560425 24560439 24560448 24560461 24560465 24560486 24560491 Upstream nucleotide (in genome): c a t t a c a c c t c a Upstream nucleotide summary: a: 4, c: 5, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g t a g c a g g g g g t Downstream nucleotide summary: a: 2, c: 1, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 2, ca: 1, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 0 >chr2:24560342-24560538 (-) gaaaaaaaaaaaaaaaaaaaagccaggcgtggtggctcacgcctgtaatcccagcactctgggaggctgaggtaggcagatcacaaggtcaggagttcaagaccagcctggccaacatggtgaaaccccgtctttactaaaaatacaaaaaa-ttagctgggcatggtggtgcgcgcctgtaatcccagctacttggg >BE152024:16-213 (-) aaaaaaaaaaaaaaaaaaaaagccaggcgtggtggctcacgcctgtagtcccggcactctgggaggctgaggtgggcggatcacaaggtcgggagttcaggaccagcctggccggcatggtgaaaccccgtctttactaaaaatacaaaaaaattggctgggcatggtggtgcgcgcctgtggtcccggctacttggg End editing Edited EST: AA618621, type: ag Aligns to: chr2:96916887-96917145 (--) All mismatches: ag (113), ag (140), ag (144), ag (148), ag (153), ag (158), ag (159), ag (178), ag (198), ag (204), ag (207), ag (213), ag (249), Editing mismatches: 13, all mismatches: 13, alignment length: 258, cluster length: 138, total number of As: 31 Locations in RNA: 113 140 144 148 153 158 159 178 198 204 207 213 249 Locations in genome: 96916999 96917026 96917030 96917034 96917039 96917044 96917045 96917064 96917084 96917090 96917093 96917099 96917136 Upstream nucleotide (in genome): t c c t c a t c c t t t t Upstream nucleotide summary: a: 1, c: 5, g: 0, t: 7, other: 0 Downstream nucleotide (in genome): t c c t g c a g g g g t c Downstream nucleotide summary: a: 1, c: 4, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 0, ca: 0, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 3, other: 0 >chr2:96916887-96917145 (-) gctgggattacaggcatgcgccactatgcccagataatttttttgtatttttagtagagacagggtttcaccatgttggccaggctggtctggaactcctaacctcaggttatccacccaccttggcctcccaaagtgctgggattataggcatgaaccaccgtgcctggccaaagatgtaatttaaaatagttagaagggacttggcatgggccagctccgtgcatggcattttcacccccagagcttcctaatcctg >AA618621:1-258 (-) gctgggattgc-ggcatgcgccactatgcccagataatttttttgtgtttttggtggagacggggtttcaccatgttggccgggctggtctggaactcctggcctcgggttgtccgcccgccttggcctcccaaagtgctgggattgtaggcatgaaccaccgtgcctggccaaagatgtaatttaaaatagttagaagggacttggcatgggccagctccgtgcatggcattttcacccccagagcttcctaatcctg End editing Edited EST: AI224415, type: ag Aligns to: chr2:68429537-68429856 (--) All mismatches: ac (36), ag (107), ag (114), ag (124), ag (150), ag (159), ag (160), ag (215), ag (225), ag (226), ag (267), ag (268), ag (301), Editing mismatches: 12, all mismatches: 13, alignment length: 319, cluster length: 195, total number of As: 54 Locations in RNA: 107 114 124 150 159 160 215 225 226 267 268 301 Locations in genome: 68429642 68429649 68429659 68429685 68429694 68429695 68429750 68429760 68429761 68429802 68429803 68429836 Upstream nucleotide (in genome): c c c t a t a a c a c c Upstream nucleotide summary: a: 4, c: 6, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g g c c t a c c a g a c Downstream nucleotide summary: a: 3, c: 5, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 1, ca: 2, cc: 2, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr2:68429537-68429856 (-) ggccgggcacagtggcttacacctgtaatcccagcactttgggagaccgaggcaagtggatcacctgaggtcgggagttcgtgaccagcctggccaacatggtgaaacctcgtctctactaaaaatagaaaaattagccgggcatggttgtgggtgcccgtaatcccagctacttggaaggctgagacaggagaatcacttgaacccaggaggcagaggttgcagtgagccgagtctgtgtcattgcactccagcgtgggagacagagcgagactccatctcaaaaaacaacaacaacaacaacaacaacaacaacaaaa >AI224415:3-321 (-) ggccgggcacagtggcttacgcctgtaatcccagcactttgggagaccgaggcgggtggatcacctgaggtcgggagttcgtgaccagcctggccggcatggtgaagcctcgtctctactaaaaatagaaaaattagccgggcatggttgtgggtgcccgtggtcccagctgcttggaaggctgagacaggagaatcgcttgaacccgggaggcggaggttgcagtgagccgagtctgtgtcattgcactccagcgtgggagacagagcgagactccatctcaaacaacaacaacaacaacaacaacaacaacaa-aaaa End editing Edited EST: AI937118, type: ag Aligns to: chr2:77654082-77654555 (--) All mismatches: ag (54), ag (55), ag (60), ag (61), ag (62), ag (84), ag (86), ag (89), ag (90), ag (91), ag (93), ag (96), ag (100), ag (107), ag (116), ag (120), ag (121), ag (126), ag (129), ag (132), ag (135), ag (145), ag (152), ag (156), ag (162), ag (168), ag (188), ag (193), ag (197), ag (201), ag (202), ag (203), ag (212), ag (217), ag (218), ag (219), ag (225), ag (227), ag (228), ag (231), ag (242), ag (243), ag (248), ag (250), ag (251), ag (257), ag (260), ag (265), ag (269), gt (274), ag (278), ag (290), ag (295), ag (296), Editing mismatches: 53, all mismatches: 54, alignment length: 475, cluster length: 242, total number of As: 74 Locations in RNA: 54 55 60 61 62 84 86 89 90 91 93 96 100 107 116 120 121 126 129 132 135 145 152 156 162 168 188 193 197 201 202 203 212 217 218 219 225 227 228 231 242 243 248 250 251 257 260 265 269 278 290 295 296 Locations in genome: 77654135 77654136 77654141 77654142 77654143 77654165 77654167 77654170 77654171 77654172 77654174 77654177 77654181 77654188 77654197 77654201 77654202 77654207 77654210 77654213 77654216 77654226 77654233 77654237 77654243 77654249 77654269 77654274 77654278 77654282 77654283 77654284 77654293 77654298 77654299 77654300 77654306 77654308 77654309 77654312 77654323 77654324 77654329 77654331 77654332 77654337 77654340 77654345 77654349 77654358 77654370 77654375 77654376 Upstream nucleotide (in genome): a c a a a c c a a g c g c g c a g c a g c g t c t c t a t a a t c a a g c a c g a c g a c g c c t a c a t Upstream nucleotide summary: a: 18, c: 18, g: 10, t: 7, other: 0 Downstream nucleotide (in genome): g a g a a g c t a a g g g g g c a c t g g g c g g c g a c a a a t c a a t c a t g a g g a g t g g g g t a Downstream nucleotide summary: a: 16, c: 8, g: 22, t: 7, other: 0 Dinucleotide summary: aa: 7, ac: 3, ag: 5, at: 3, ca: 4, cc: 3, cg: 8, ct: 3, ga: 3, gc: 0, gg: 6, gt: 1, ta: 2, tc: 2, tg: 3, tt: 0, other: 0 >chr2:77654082-77654555 (-) agggtaaatatttacataaaagtagaattaatgtagtgatccataactgtactgtggactaagagtccttatttgttattttttcaacaaatttttctcagatattaactaggtcccaagcactttgctaaattctagagaagaataaagctaggccgggtgcggtggctcacgcctgtaatcccagcactttgggaagctgaggtaggcagatcatgaggtc-aagagatcaagaccatcctgatcaacatgatgaaacctcatctccactaaaaatacaaaaattagctgggtgtggtggtgcgcacctgtagtcccagctactctggaggctggggcaggagaatcacttgaacccaggaggcggaggttgcagtgagcagaaatcacagcactgtgccctagtctggcaaaagagcaagactccgtcagaaaaaaaaaaaaaaaagccaggcacagtcacagccttagctt >AI937118:1-475 (-) agggtaaatatttacataaaagtagaattaatgtagtgatccataactgtactgtggactaagagtccttatttgttattttttcaacaaatttttctcagatattaactaggtcccaagcactttgctaaattctagagaagaataaagctaggccgggtgcggtggctcacgcctgtggtcccggcactttgggaggcttaggtgggcggatcgtggggtccgggggatcgggaccatcctggtcggcgtgatggggcctcgtctccactgggaatgcaagaattggctgggtgtggtggtgcgcgcctgtggtcccggctgctctgggggctggggcgggggagtcgcttgggcccgggaggcgggggttgcggtgggcgggggtcgcggcactgtgccctagtctggcaggggagcgggactccgtcagaaaaaaaaaaaaaaaagccaggcacagtcacagccttagctt End editing Edited EST: DB333591, type: ag Aligns to: chr3:141790017-141790570 (--) All mismatches: ag (13), ag (56), ag (75), ag (79), ag (111), ag (120), ag (147), ag (150), ag (172), ag (177), ag (185), ag (187), ag (188), ag (211), ag (248), Editing mismatches: 15, all mismatches: 15, alignment length: 554, cluster length: 236, total number of As: 65 Locations in RNA: 13 56 75 79 111 120 147 150 172 177 185 187 188 211 248 Locations in genome: 141790029 141790072 141790091 141790095 141790127 141790136 141790163 141790166 141790188 141790193 141790201 141790203 141790204 141790227 141790264 Upstream nucleotide (in genome): c t c a t a c a c a c a c c c Upstream nucleotide summary: a: 5, c: 8, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): a a g c c t g t t c t c a g c Downstream nucleotide summary: a: 3, c: 5, g: 3, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 3, ag: 0, at: 2, ca: 2, cc: 1, cg: 3, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr3:141790017-141790570 (-) caaatcacttacaaggctttttgattccacctaactctctgagccttcctcacccattttctctgccttcactgctgctgtaataggtcagactactataaaccatttcctggattactgcagctgattttctgtttcattctctgtactgtagctgcatactttttctcaaacacagatctgcacaaatcttttcatgttgtaaaacattttaatagttccttattgccctcaagataaagtccaaactacaatttaaatgatcctttatggccgggtgcggtggctcacgcgtgtattccttgcactttgagagaccaatgcagttggatcagttgaggtcaggagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatataaataatcagcccggtgcggtggtgtgcgcctgtaatcccagctactaggggggctgaggcaggagaatcgcttgaacccaggaggcagagcttgcagtaagccaagattcagccactgcacttcagcctgggtgacagagcaagactccatctc >DB333591:1-554 (-) caaatcacttacaaggctttttgattccacctaactctctgagccttcctcacccattttctctgccttcactgctgctgtaataggtcagactactataaaccatttcctggattactgcagctgattttctgtttcattctctgtactgtagctgcatactttttctcaaacacagatctgcacaaatcttttcatgttgtaaaacattttaatagttccttattgccctcaagataaagtccaaactacaatttaaatgatcctttatggccgggtgcggtggctcacgcgtgtattccttgcgctttgagagaccaatgcagttggatcagttgaggtcgggagttcgagaccagcctggccggcgtggtgaagccccgtctctactaaaaatataaatagtcggcccggtgcggtggtgtgcgcctgtagtcccagctgctaggggggctgaggcaggagaatcgcttgagcccgggaggcagagcttgcagtgagccaagattcagccactgcacttcagcctgggtgacagagcgagactccatctc End editing Edited EST: BG222590, type: ag Aligns to: chr3:136298810-136299169 (--) All mismatches: ag (53), ag (58), ag (61), ag (97), ag (129), ag (133), ag (139), ag (165), ag (175), ag (178), ag (181), ag (205), ag (221), ag (228), ag (234), ag (251), ag (267), ag (272), ag (273), Editing mismatches: 19, all mismatches: 19, alignment length: 360, cluster length: 221, total number of As: 64 Locations in RNA: 53 58 61 97 129 133 139 165 175 178 181 205 221 228 234 251 267 272 273 Locations in genome: 136298862 136298867 136298870 136298906 136298938 136298942 136298948 136298974 136298984 136298987 136298990 136299014 136299030 136299037 136299043 136299060 136299076 136299081 136299082 Upstream nucleotide (in genome): g c c a t c t t t a t a c a a c c a t Upstream nucleotide summary: a: 6, c: 6, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): c c c c c g g g c a a c a g g a g t a Downstream nucleotide summary: a: 5, c: 7, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 2, at: 1, ca: 2, cc: 2, cg: 2, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 2, tc: 2, tg: 2, tt: 0, other: 0 >chr3:136298810-136299169 (-) attttcttcttttttatttttatctaagtaatacatgtacatgacttaaacaaatcaaatgagccgggcgcggtggctcatgcctgtaatcccagcactttgggaggccaaggcaggcatatcacaaggtcaagagatcaagaccatcctggccaacatgatgaaacctcatctctactaaaaatacaaaaaattagctgtgcgtggtggtgcacgcctgtagtcccagctacttgggaggctgagacaggaggattgcttgaaccttggaggtggaggttgcagtgagccgagatcgcaccactggactccagcctggcgacagagtgagactccgtctcaaaaaaaaaaaaaaaaaaa >BG222590:1-360 (-) attttcttcttttttatttttatctaagtaatacatgtacatgacttaaacaaatcaaatgagccgggcgcggtggctcatgcctgtggtcccggcactttgggaggccgaggcaggcatatcacagggtcaggagatcgagaccatcctggccagcatgatgaaacctcatctctactgaagatgcaaaaaattggctgtgcgtggtggtgcacgcctgtggtcccggctgcttgggaggctgagacaggaggattgcttgagccttggaggtggaggttgcagtgagccgagatcgcgccgctgggctccagcctggcgacagagtgagactccgtctcaaaaaaaaaaaaaaaaaaa End editing Edited EST: AW162753, type: ag Aligns to: chr3:49360411-49360699 (--) All mismatches: ag (51), ag (58), ag (62), ag (67), ag (87), ag (119), ag (128), ag (129), ag (151), ag (155), ag (160), ag (165), ag (166), ag (167), ag (172), ag (191), ag (222), ag (262), Editing mismatches: 18, all mismatches: 18, alignment length: 289, cluster length: 212, total number of As: 54 Locations in RNA: 51 58 62 67 87 119 128 129 151 155 160 165 166 167 172 191 222 262 Locations in genome: 49360461 49360468 49360472 49360477 49360497 49360529 49360538 49360539 49360561 49360565 49360570 49360575 49360576 49360577 49360582 49360601 49360632 49360672 Upstream nucleotide (in genome): c g a c a t a t c t a a a a t c g a Upstream nucleotide summary: a: 8, c: 4, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): c g c g c c t a g g a t a a c t g t Downstream nucleotide summary: a: 4, c: 5, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 0, at: 3, ca: 0, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr3:49360411-49360699 (-) ggccaggagcagtggctcatgcctgtaatcccagcactttgggaggccgaggtgggcggctcacctgaggttgagagtttgagaccagcctgaccaacatggagaaaccctgtctctactaaaaatgcaaaattagccaggcgtggtggtgcatatctgtaatttcagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagggaactgagattgcaccattgcactctagcctggggaacaagagcgaaactccatctcaaaaaaa >AW162753:1-289 (-) ggccaggagcagtggctcatgcctgtagtcccagcactttgggaggccgaggtgggcggctcacctggggttgagagtttgagaccagcctgaccaacgtggagaaaccctgtctctgctaagggtgcagaattggccgggcgtggtggtgcatatctgtggtttcagctgcttgggaggctgaggcaggagaatcgcttgagcccgggaggcggaggttgcggggagctgggattgcgccattgcactctagcctggggaacaagagcgaaactccatctcaaaaaaa End editing Edited EST: AI275025, type: ag Aligns to: chr3:176864851-176865278 (--) All mismatches: ag (47), ag (50), ag (51), ag (52), ag (53), ag (61), ag (77), ag (123), ag (141), ag (149), ag (154), ag (157), ag (186), ag (214), ag (260), Editing mismatches: 15, all mismatches: 15, alignment length: 428, cluster length: 214, total number of As: 58 Locations in RNA: 47 50 51 52 53 61 77 123 141 149 154 157 186 214 260 Locations in genome: 176864897 176864900 176864901 176864902 176864903 176864911 176864927 176864973 176864991 176864999 176865004 176865007 176865036 176865064 176865110 Upstream nucleotide (in genome): c a a a c c c t c t a a t c t Upstream nucleotide summary: a: 5, c: 6, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): c t a a a g g g t g t a g g a Downstream nucleotide summary: a: 5, c: 1, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 0, at: 2, ca: 1, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 3, tt: 0, other: 0 >chr3:176864851-176865278 (-) ctttcactgtgttgacatttgcactttggctcaaaagtgatgttttggaaaacttgctggttaggaaaaaatcagtgcagtttcttcaaactatgttctgcagcaccatcaccacatatttatagtaaacgaagttttacttggtcgggcatcgtggctcatccctgtaatcccagcactttgagaggctgaggcaggagaattgcttgagcacaggagtttgagaccagcctgggcaacatagggagacctcgtctctataaaaaaaccaaaaatgttagctgggcatggtgatgcgtgcctgtagtcccagctacttaggaggctgagctgtggtgatcccttgagtccaggaggttgaggctgcagtgagccaaaatcacgccattgcactccaggctgggtgatagagtaagactacatctctt >AI275025:1-428 (-) ctttcactgtgttgacatttgcactttggctcaaaagtgatgttttggaaaacttgctggttaggaaaaaatcagtgcagtttcttcaaactatgttctgcagcaccatcaccacatatttatagtaaacgaagttttacttggtcgggcatcgtggctcatccctgtgatcccagcactttgagaggctgaggcaggagaattgcttgagcacgggagtttgagaccagcctgggcaacatggggagacctcgtctctataaaaaaaccagaagtgttggctgggcgtggtgatgcgtgcctgtggtcccagctacttaggaggctgagctgtggtgatcccttgagtccgggaggttgaggctgcggtgagccggggtcgcgccattgcactccaggctgggtgatagagtaagactacatctctt End editing Edited EST: DB317161, type: ag Aligns to: chr4:21649516-21650044 (--) All mismatches: ag (29), ag (44), ag (54), ag (57), ag (78), ag (79), ag (87), ag (97), ag (103), ag (107), ag (110), ag (114), ag (120), ag (129), ag (146), ag (150), ag (152), ag (156), ag (162), ag (165), ag (171), ag (190), ag (199), ag (201), ag (207), ag (210), ag (215), ag (218), ag (227), ag (276), ag (323), Editing mismatches: 31, all mismatches: 31, alignment length: 529, cluster length: 295, total number of As: 79 Locations in RNA: 29 44 54 57 78 79 87 97 103 107 110 114 120 129 146 150 152 156 162 165 171 190 199 201 207 210 215 218 227 276 323 Locations in genome: 21649544 21649559 21649569 21649572 21649593 21649594 21649602 21649612 21649618 21649622 21649625 21649629 21649635 21649644 21649661 21649665 21649667 21649671 21649677 21649680 21649686 21649705 21649714 21649716 21649722 21649725 21649730 21649733 21649742 21649791 21649838 Upstream nucleotide (in genome): c c g a a g a g g t t c t g t a a t t c c c g g g c g c c c a Upstream nucleotide summary: a: 6, c: 10, g: 9, t: 6, other: 0 Downstream nucleotide (in genome): g c g t c a t g g g c g g g g a a c a c t c c g g g g c g g g Downstream nucleotide summary: a: 4, c: 8, g: 16, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 2, ca: 0, cc: 4, cg: 5, ct: 1, ga: 1, gc: 1, gg: 7, gt: 0, ta: 1, tc: 2, tg: 3, tt: 0, other: 0 >chr4:21649516-21650044 (-) gtcttcttccctgaactataacatattcatacaatgagctcttactgcttatttgcacatttattctcattttaaataataaattaaaacacttgccacatacaaaacatgtgacattacagcttactggacttaaagtagaaattgctttaaaatgaatttttggagtatatttttatatggtttacctcgttttgcagggatgaaggacatcagtgtattcatctgttttttaaaagtatcattgtaggccaggcgcggtggctcacacctgtaatcccagcactttgggaggccgaggcaggcggatcacgaggtcaggagatcgagaccatcctcactaacacggtgaaaccccatctccactaaaaatacaaaaaattagctgggcgtggtggcgagcgtctgtagtcccagctactagggaggctgaggcaggagaatggcgtgaacccgggagatggagcttgcaatgagccgagatcacgccactgcactccagcctgggcaccagagtgagacactgtct >DB317161:1-529 (-) gtcttcttccntgaactataacatattcatacaatgagctcttactgcttatttgcacatttattctcattttaaataataaattaaaacacttgccacatacaaaacatgtgacattacagcttactggacttaaagtagaaattgctttaaaatgaatttttggagtatatttttatatggtttacctcgttttgcagggatgagggacatcagtgtattcatctgttttttaaaagtatcattgtaggccgggcgcggtggctcacacctgtaatcccagcactttgggaggccgaggcgggcggatcgcggggtcgggggatcggggccatcctcgctaacacggtgaaaccccgtctccgctgaaaatgcaagagattggctgggcgtggtggcgggcgtctgtggtcccggctgctgggggggctggggcaggagagtggcgtgggcccgggagatggagcttgcagtgggccgagatcgcgccactgcactccggcctgggcaccagagtgagacactgtct End editing Edited EST: AA970635, type: ag Aligns to: chr4:69868210-69868559 (--) All mismatches: ag (82), ag (109), ag (113), ag (114), ag (128), ag (144), ag (167), ag (205), ag (215), ag (218), ag (219), ag (256), ag (275), ag (301), ag (302), ag (316), Editing mismatches: 16, all mismatches: 16, alignment length: 351, cluster length: 234, total number of As: 48 Locations in RNA: 82 109 113 114 128 144 167 205 215 218 219 256 275 301 302 316 Locations in genome: 69868291 69868318 69868322 69868323 69868337 69868353 69868376 69868414 69868424 69868427 69868428 69868465 69868484 69868509 69868510 69868524 Upstream nucleotide (in genome): t t a t t a t t t a t t t a c t Upstream nucleotide summary: a: 4, c: 1, g: 0, t: 11, other: 0 Downstream nucleotide (in genome): g a t a t c c t t g a t g t a c Downstream nucleotide summary: a: 4, c: 3, g: 3, t: 6, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 2, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 3, tc: 2, tg: 2, tt: 4, other: 0 >chr4:69868210-69868559 (-) taaggtgggagacaaaggtgaagtttcattcatctacatgtggattgccaattattccag-ccccatttgttgaatagagtgtcatttcccctttatgtttttgtttgctttgtcaaagttcagttggctataagtatttgtctttatttctggaatctctattctgtacatgcctgttttcatactgataccatgttgttttggtaacttttaatgtgccttataatacattgggtaatgtaatgcctctaggtttgttcttttttgtagtctttctttgactatgcaggtttcaaagccgagaatcaaataaagaactcatccattttgaaaatagctgcaaaaaaaaa >AA970635:1-351 (-) taaggtgggagacaaaggtgaagtttcattcatctgcatgtggattgccggttattccagcccccatttgttgaatggagtgtcatttcccctttgtgtttttgtttgctttgtcaaagttcagttggctatgggtgtttgtctttgtttctggaatctctattctgtacatgcctgttttcatgctgataccatgttgttttggtagcttttaatgtgccttgtaatacattgggtggtgtgatgcctctaggtttgttcttttttgtggtctttctttgactatgcaggtttcaaagccgagaatcaaataaagaactcatccattttgaaaatagctgcaaaaaaaaa End editing Edited EST: AI733325, type: ag Aligns to: chr4:69868211-69868686 (--) All mismatches: ag (81), ag (108), ag (112), ag (113), ag (127), ag (143), ag (166), ag (204), ag (214), ag (217), ag (218), ag (255), ag (274), ag (299), ag (300), ag (314), ag (350), ag (387), ag (402), ag (409), ag (412), ag (425), ag (451), Editing mismatches: 23, all mismatches: 23, alignment length: 476, cluster length: 371, total number of As: 82 Locations in RNA: 81 108 112 113 127 143 166 204 214 217 218 255 274 299 300 314 350 387 402 409 412 425 451 Locations in genome: 69868291 69868318 69868322 69868323 69868337 69868353 69868376 69868414 69868424 69868427 69868428 69868465 69868484 69868509 69868510 69868524 69868560 69868597 69868612 69868619 69868622 69868635 69868661 Upstream nucleotide (in genome): t t a t t a t t t a t t t a c t t t t a t c t Upstream nucleotide summary: a: 5, c: 2, g: 0, t: 16, other: 0 Downstream nucleotide (in genome): g a t a t c c t t g a t g t a c t g t t g g a Downstream nucleotide summary: a: 5, c: 3, g: 6, t: 9, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 3, ca: 1, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 4, tc: 2, tg: 4, tt: 6, other: 0 >chr4:69868211-69868686 (-) atttttggtcatgaggtttttgcctaacccaatgtctagaagagtttttccagtgttaccttctagaattttttattgtttctgatcttagttttcactatttgatccatcttgagttgattttttataaggtgggagacaaaggtgaagtttcattcatctacatgtggattgccaattattccagccccatttgttgaatagagtgtcatttcccctttatgtttttgtttgctttgtcaaagttcagttggctataagtatttgtctttatttctggaatctctattctgtacatgcctgttttcatactgataccatgttgttttggtaacttttaatgtgccttataatacattgggtaatgtaatgcctctaggtttgttcttttttgtagtctttctttgactatgcaggtttcaaagccgagaatcaaataaagaactcatccattttgaaaatagctgcaaaaaaaa >AI733325:1-476 (-) atttttggtcatgaggtttttgcctgacncaatgtctagaagagtttttccggtgttaccttctggagttttttgttgtttctgatcttggttttcactatttgatccatcttgagttgattttttgtaaggtgggagacaaaggtgaagtttcattcatctgcatgtggattgccggttattccagccccatttgttgaatggagtgtcatttcccctttgtgtttttgtttgctttgtcaaagttcagttggctatgggtgtttgtctttgtttctggaatctctattctgtacatgcctgttttcatgctgataccatgttgttttggtagcttttaatgtgccttgtaatacattgggtggtgtgatgcctctaggtttgttcttttttgtggtctttctttgactatgcaggtttcaaagccgagaatcaaataaagaactcatccattttgaaaatagctgcaaaaaaaa End editing Edited EST: N23277, type: ag Aligns to: chr5:10277215-10277490 (--) All mismatches: ag (63), ag (67), ag (88), ag (110), ag (127), ag (134), ag (150), ag (154), ag (159), ag (165), ag (172), ag (178), Editing mismatches: 12, all mismatches: 12, alignment length: 276, cluster length: 116, total number of As: 35 Locations in RNA: 63 67 88 110 127 134 150 154 159 165 172 178 Locations in genome: 10277277 10277281 10277302 10277324 10277341 10277348 10277364 10277368 10277373 10277379 10277386 10277392 Upstream nucleotide (in genome): g c t a a c t t a a c c Upstream nucleotide summary: a: 4, c: 4, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g g a g t c g g a t c t Downstream nucleotide summary: a: 2, c: 2, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 2, ca: 0, cc: 2, cg: 1, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 0 >chr5:10277215-10277490 (-) ggctcatgcctgtaatcccagcactttgggagtctgaggtggactgatcatttgaggtcagaagttcaagatcagcctggccaacatggtgaaaccccatctccactaaaaattcaaaaattagctaggcatggtggtgggcacctgtaatcccagctacttgggaagctgaggcaggagaatcacttaaacccggaggtggaggttgcagtgagctgagatggtgccattttactccagcctgggccacagagcaagaccatctcaaaaaaaaaa >N23277:1-276 (-) ggctcatgcctgtaatcccagcactttgggagtctgaggtggactgatcatttgaggtcagaagttcaagatcagcctggccaacatggtgaaaccccgtctccgctaaaagttcaagaattggctgggcatggtggtgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatcacttgaacccggaggtggaggttgcggtgggctgagatggtgccattttactccagcctgggccacagagcaagaccatctcaaaaaaaaaa End editing Edited EST: DB341890, type: ag Aligns to: chr5:133518068-133518439 (--) All mismatches: ag (11), ag (12), ag (21), ag (35), ag (54), ag (98), ag (112), ag (170), ag (182), ag (190), ag (201), ag (206), ag (211), ag (216), ag (238), ag (242), ag (248), ag (252), ag (257), ag (270), ag (274), ag (283), ag (284), ag (290), ag (297), ag (310), ag (315), ag (341), ag (350), Editing mismatches: 29, all mismatches: 29, alignment length: 371, cluster length: 341, total number of As: 107 Locations in RNA: 11 12 21 35 54 98 112 170 182 190 201 206 211 216 238 242 248 252 257 270 274 283 284 290 297 310 315 341 350 Locations in genome: 133518078 133518079 133518088 133518102 133518121 133518165 133518179 133518238 133518250 133518258 133518269 133518274 133518279 133518284 133518306 133518310 133518316 133518320 133518325 133518338 133518342 133518351 133518352 133518358 133518365 133518378 133518383 133518409 133518418 Upstream nucleotide (in genome): a a c c t c t a c a c c c g c a t t c c t a t c t t a a a Upstream nucleotide summary: a: 9, c: 11, g: 1, t: 8, other: 0 Downstream nucleotide (in genome): a a a c c g g c a c c t g g g c c a g g c t a c g g a a t Downstream nucleotide summary: a: 8, c: 9, g: 9, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 3, ag: 0, at: 2, ca: 2, cc: 3, cg: 5, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 3, tg: 3, tt: 0, other: 0 >chr5:133518068-133518439 (-) agtttgagaccagcctggccaatagggtgaaaccctgtctctactaaaaataacaaaaattagctgggcatggtagcaggcacctgtaatctcagctactcaggaggctgaggcaggataattacttgaacccaggaggtggagaggttgcggtgagctcagatcatgccactgcactccaacctgggcaacaagagtgaaactccgtctcaaaaaaaaaaaaaaaatagcccagatatactacagtggtgtgcacctgtagtcccagctactcaggaggctgaggtgggaggattgcttgagcccaggaggtcaagtacagtgattgcgccactgcactccaggctgggcaatagagcaaaaccctgtctc >DB341890:1-371 (-) agtttgagaccagcctggccagtagggtgagaccctgtctctactaaaaataacaagaattggctgggcatggtggcaggcgcctgtggtctcagctgctcgggaggctgaggcgggatgattgcttgagcccgggaggtggagaggttgcggtgggctcggatcgtgccgctgcactccagcctgggcgacaagagtgaagctccgtctc-aaaaaaaaaaaaaaatagcccagatatactacagtggtgtgcacctgtggtcccagctactcgggaggctgaggtgggaggattgcttgagcccaggaggtcaagtgcagtgattgcgccactgcgctccaggctgggcgatagagcaggaccctgtctc End editing Edited EST: DB316136, type: ag Aligns to: chr5:107944785-107945332 (--) All mismatches: ag (43), ag (50), ag (62), ag (79), ag (98), ag (111), ag (120), ag (121), ag (127), ag (147), ag (159), ag (160), ag (164), ag (197), ga (209), Editing mismatches: 14, all mismatches: 15, alignment length: 548, cluster length: 155, total number of As: 44 Locations in RNA: 43 50 62 79 98 111 120 121 127 147 159 160 164 197 Locations in genome: 107944826 107944833 107944845 107944862 107944881 107944894 107944903 107944904 107944910 107944930 107944942 107944943 107944947 107944980 Upstream nucleotide (in genome): c g t a g t a t t t a a a c Upstream nucleotide summary: a: 5, c: 2, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): c g t c g c t a c g t a t g Downstream nucleotide summary: a: 2, c: 4, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 3, ca: 0, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 2, tg: 1, tt: 1, other: 0 >chr5:107944785-107945332 (-) ttttgtggcaccgaaactttatatataacatggccaaggtggttggggcacagcttggttttacacattttagggaggcatgagacatcaattaaatacatttaagaaatacagtgggttgatctagggaggggaactcaaattccgtgggaggtgtgggtggctgaagggaaatttaaacattttctggttgacaattggttgagtttatctaaacacctgagatccatagaaagaaaatgttcaggttaagacaaaagattgtgggccaggcatggttgctcacacctgtaatcctagcattttgggaggctgaggcgggtggatcacctgagatcaggagttggagaccagcctggccaacatggttaaactcccgtctccaataaaattacaaaaattagctgggtgtggtggcagatacttgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacccgggggtggaggttataggtgagctgagattgcaccacttcactccagcctgggtgaaagagtgagacttcatct >DB316136:2-549 (-) ttttgtggcaccgaaactttatatataacatggccaaggtggttggggcacagcttggttttacacattttagggaggcatgagacatcaattaaatacatttaagaaatacagtgggttgatctagggaggggaactcaaattccgtgggaggtgtgggtggctgaagggaaatttaaacattttctggttgacaattggttgagtttatctaaacacctgagatccatagaaagaaaatgttcaggttaagacaaaagattgtgggccaggcatggttgctcacacctgtaatcctagcattttgggaggctgaggcgggtggatcacctgagatcagaagttggagaccggcctggccaacatggttaaactcccgtctccagtaaggttacaaaaattggctgggtgtggtggcagatgcttgtggtcccagctgctcaggaggctggggcaggagaatcacttgagcccgggggtggaggttgtaggtgagctgggattgcgccacttcactccagcctgggtgaaagagtgagacttcatct End editing Edited EST: DB319367, type: ag Aligns to: chr5:38826679-38827215 (--) All mismatches: ag (12), ag (13), ag (29), ag (47), ag (49), ag (50), ag (54), ag (65), ag (67), ag (103), ag (106), ag (119), ag (120), ag (139), ag (147), ag (151), ag (152), ag (176), ag (177), ag (186), ag (187), ag (210), ag (218), ag (222), ag (223), ag (248), ag (254), Editing mismatches: 27, all mismatches: 27, alignment length: 537, cluster length: 243, total number of As: 70 Locations in RNA: 12 13 29 47 49 50 54 65 67 103 106 119 120 139 147 151 152 176 177 186 187 210 218 222 223 248 254 Locations in genome: 38826690 38826691 38826707 38826725 38826727 38826728 38826732 38826743 38826745 38826781 38826784 38826797 38826798 38826817 38826825 38826829 38826830 38826854 38826855 38826864 38826865 38826888 38826896 38826900 38826901 38826926 38826932 Upstream nucleotide (in genome): a c c g a c g g c t c a t c t a a a a a c a c a c c t Upstream nucleotide summary: a: 10, c: 10, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): g a g t g a g g g g g t a t g a a c a c a g t a a g a Downstream nucleotide summary: a: 10, c: 2, g: 11, t: 4, other: 0 Dinucleotide summary: aa: 4, ac: 2, ag: 3, at: 1, ca: 4, cc: 0, cg: 4, ct: 2, ga: 0, gc: 0, gg: 2, gt: 1, ta: 2, tc: 0, tg: 2, tt: 0, other: 0 >chr5:38826679-38827215 (-) tccccattgcccttgattgacagttactcatgacatgttctacccatgacatgttcatcccatgacagatcaaagaagcttaggagagaagccatgtcacacagcacattgaaagcttctgctcttatgtctgcttctgttttgttgaacaaagtaagatacctggccaagctcaaagtcaatggaataggaaagtataattgtcctccaggggaagaaggaagggaattaatattttgtaaaaagttgaccagatcagctgggcgcggtggctcatgcctgtaatcccagcactttgggaggctgaggagggcaaatcatgaggtaaggagatcgagaccatcctggccaacatggtgaaaccccgtctattctaaaactacaaaaattagctgagcattgtggctgcgtgcctgtaatcccagctactcagtaggctgaggcaggagaatcgcttgaaccagagtgtcagaggttgcagtgagccaagatcgtgccactgcactccagcctggcaacagagcaagactctgtctc >DB319367:1-537 (-) tccccattgcccttgattgacagttactcatgacatgttctacccatgacatgttcatcccatgacagatcaaagaagcttaggagagaagccatgtcacacagcacattgaaagcttctgctcttatgtctgcttctgttttgttgaacaaagtaagatacctggccaagctcaaagtcaatggaataggaaagtataattgtcctccaggggaagaaggaagggaattaatattttgtaaaaagttgaccagatcagctgggcgcggtggctcatgcctgtgatcccggcactttgggaggctgaggagggcggatcgtgaggtagggagatcgagaccatcctggccggcatggtgaggccccgtctattctaaaactacaaggattggctgagcgttgtggctgcgtgcctgtggtcccagctactcggtgggctgaggcaggagaatcgcttgaaccagagtgtcgggggttgcagtgggccggggtcgtgccactgcactccggcctggcaacagagcgggactctgtctc End editing Edited EST: DW435925, type: ag Aligns to: chr5:131084104-131084349 (--) All mismatches: ag (9), ag (17), ct (21), ag (35), ag (47), ag (48), ag (57), ag (62), ag (102), ag (110), ag (124), ag (127), ag (165), ag (173), ag (183), ag (195), ag (210), ag (213), ag (232), ag (238), ag (248), ag (249), Editing mismatches: 21, all mismatches: 22, alignment length: 246, cluster length: 241, total number of As: 47 Locations in RNA: 9 17 35 47 48 57 62 102 110 124 127 165 173 183 195 210 213 232 238 248 249 Locations in genome: 131084104 131084112 131084130 131084142 131084143 131084152 131084157 131084197 131084205 131084219 131084222 131084260 131084268 131084278 131084290 131084305 131084308 131084327 131084333 131084343 131084344 Upstream nucleotide (in genome): c c t a a c c t c t t c t t c g c a c a c Upstream nucleotide summary: a: 4, c: 10, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): n c c g a g c g c g g t c g g g a c c t a Downstream nucleotide summary: a: 3, c: 7, g: 8, t: 2, other: 1 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 1, ca: 2, cc: 4, cg: 2, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 2, tg: 4, tt: 0, other: 1 >chr5:131084104-131084349 (-) ggcgcaatcttggctcactgcaacctctgcttcctgggttcaagagattctcctgcctcagcctcctgagtagctgggactacaggtgcatgccaccacgcctggctaatttttgttttgtacttttagtagagacagggtttcaccatgttagtcaggatggtctcaatctcctgaccttgtgatctgcccacctcagcctcccaaagtgctgggattacaggtgtgagccactgcacccggcca >DW435925:9-254 (-) ggcgcggtcttggctcgctgcagcctctgcttcctgggttcgagggattctcctgcctcggcctcctgagtggctgggactgcaggtgcgtgccaccacgcctggctaatttttgttttgtacttttggtggagacagggtttcgccatgttggtcaggatggtctcaatctcctgaccttgtgatctgcccgcctcggcctcccagggtgctgggattgcaggtgtgagccattgcgcccggccg End editing Edited EST: BX508060, type: ag Aligns to: chr5:32411826-32412514 (--) All mismatches: ag (13), ag (28), ag (34), ag (35), ag (58), ag (59), ag (66), ag (68), ag (69), ag (78), ag (87), ag (93), ag (98), ag (103), ag (105), ag (106), tc (667), Editing mismatches: 16, all mismatches: 17, alignment length: 689, cluster length: 94, total number of As: 31 Locations in RNA: 13 28 34 35 58 59 66 68 69 78 87 93 98 103 105 106 Locations in genome: 32411838 32411853 32411859 32411860 32411883 32411884 32411891 32411893 32411894 32411903 32411912 32411918 32411923 32411928 32411930 32411931 Upstream nucleotide (in genome): t t a t a t t a t t t t t t a a Upstream nucleotide summary: a: 5, c: 0, g: 0, t: 11, other: 0 Downstream nucleotide (in genome): t c g a g a c t a c g t a t t a Downstream nucleotide summary: a: 5, c: 3, g: 3, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 2, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 4, tc: 3, tg: 1, tt: 3, other: 0 >chr5:32411826-32412514 (-) cttgtctctcatgatagtgatatttttgaagtgttcaggccagttgtcttgtagaatgtcccatatctggatttatctgatgatttatgtttagattcaggtaactttttagacaagaaaattacttgaccagccttccatttcatcacatcagaagcatgtaataagtaatgtttgtttattcctattgatgctggctttactggttaaagctgtgcctatcagatctctccattataaagatacctttttcctttataatgaacaagtactctgtgggcctgttgctcaactgtctttcaccctgtggtggtagatcctttgaaaactgaatgaatttctacagtggtagttgcaaaatcctttcacattgatccttaggcattcttctctagagttccctccttccacttctttttttgttattactatgaacttactcatttttattcaatgtacagtcatccctgctatccatgggagattggttccagggcccccattgataccaaaatttgtggatgctcaagtcacatatataaaatgacataatatttgcctttaacctacgtacatcctcttaaatatgttaaattatctctagattacttacagtacctaataccatgtaagtgctatatataaatggttgttaagctgtactgagttttgtattatattttctattc >BX508060:1-689 (-) cttgtctctcatgatagtgatacttttgaagtgttcaggccagttgtcttgtagaatgtcccatatctggatttatctgatgatttatgtttagattcaggtaactttttagacaagaaaattacttgaccagccttccatttcatcacatcagaagcatgtaataagtaatgtttgtttattcctattgatgctggctttactggttaaagctgtgcctatcagatctctccattataaagatacctttttcctttataatgaacaagtactctgtgggcctgttgctcaactgtctttcaccctgtggtggtagatcctttgaaaactgaatgaatttctacagtggtagttgcaaaatcctttcacattgatccttaggcattcttctctagagttccctccttccacttctttttttgttattactatgaacttactcatttttattcaatgtacagtcatccctgctatccatgggagattggttccagggcccccattgataccaaaatttgtggatgctcaagtcacatatataaaatgacataatatttgcctttaacctacgtacatcctcttaggtgtgttgaattgtctctggattacttgcagtacctggtgccatgtgggtgctatatataaatggttgttgggctgtgctgagttttgtattgtattttctattc End editing Edited EST: AA617665, type: ag Aligns to: chr5:90599259-90599639 (--) All mismatches: ag (23), ag (24), ag (25), ag (29), ag (33), ag (53), ag (54), ag (65), ag (72), ag (73), ag (78), ag (85), ag (89), ag (95), ag (121), ag (124), ag (131), ag (133), ag (134), ag (137), ag (153), ag (154), ag (162), ag (195), ag (230), ag (231), ag (237), ag (239), gc (243), Editing mismatches: 28, all mismatches: 29, alignment length: 380, cluster length: 217, total number of As: 56 Locations in RNA: 23 24 25 29 33 53 54 65 72 73 78 85 89 95 121 124 131 133 134 137 153 154 162 195 230 231 237 239 Locations in genome: 90599281 90599282 90599283 90599287 90599291 90599311 90599312 90599323 90599330 90599331 90599336 90599343 90599347 90599353 90599379 90599382 90599389 90599391 90599392 90599395 90599411 90599412 90599420 90599453 90599488 90599489 90599495 90599497 Upstream nucleotide (in genome): a a c g c a g g a t g t c t t a t a a t a c c c a t c c Upstream nucleotide summary: a: 9, c: 8, g: 4, t: 7, other: 0 Downstream nucleotide (in genome): a a a g g c a g g a g c g g g t c t a a a a a c t a c c Downstream nucleotide summary: a: 11, c: 6, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 1, at: 3, ca: 3, cc: 3, cg: 2, ct: 0, ga: 1, gc: 0, gg: 3, gt: 0, ta: 3, tc: 2, tg: 2, tt: 0, other: 0 >chr5:90599259-90599639 (-) ggcatgtgcagacttaaaaattacacaggggaatgtaggcacgatctgtttaagaaatactggactaaatggtctctaatctgtgattgtagattaaagaataatctacaatctacaccgtgttggccaggcacggtggctcacacctgtaattccagcactttgggaggctgaggtgtgtggatcacatgaggtcaggagttcgagaccagcctcaccaatgtggcaaaaccccctctctactaaaaatacggaaaattagctgggtgtggtggtgcatgtctgtagtcccagctactcgggaggctaaggcatgagaattgcttgaacctgggaggtggaggttgcagtgagccaaaatcacgccactgcactccagcc >AA617665:1-380 (-) ggcatgtgcagacttaaaaattacacaggggaatgtaggcacgatctgtttaagaaatactggactaaatggtctctaatctgtgattgtagattaaagaataatctacaatctacaccgtgttggccaggcacggtcg-tcgcgcctgtggttccagcactttgggaggctgaggtgtgtggatcgcatgaggtcaggagttcgagaccagcctcaccgatgtggcggaaccccctctctactgaaggtgcggaaagttggctgggtgtggtggtgcatgtctgtggtcccggctgctcggggggctggggcatgggaattgcttgggcctgggaggtggaggttgcggtgggccgggatcacgccactgcactccagcc End editing Edited EST: AI445342, type: ag Aligns to: chr5:179274165-179274465 (--) All mismatches: ag (96), ag (106), ag (128), ag (150), ag (160), ag (168), ag (176), ag (179), ag (222), ag (233), ag (245), ag (262), ag (270), Editing mismatches: 13, all mismatches: 13, alignment length: 300, cluster length: 176, total number of As: 52 Locations in RNA: 96 106 128 150 160 168 176 179 222 233 245 262 270 Locations in genome: 179274260 179274270 179274292 179274314 179274324 179274332 179274340 179274343 179274386 179274397 179274410 179274427 179274435 Upstream nucleotide (in genome): c c c c c t a t g c c t c Upstream nucleotide summary: a: 1, c: 8, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g c g t t g a c c g g g g Downstream nucleotide summary: a: 1, c: 3, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 0, cc: 1, cg: 5, ct: 2, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr5:179274165-179274465 (-) ccaggcgcagtggctcatgcttgtagtcccagcactttaggaggccaaggcgggcagatcacgaggtcaggagttcgagaccagcctggccagcatggtgaaaccccgtgtatattaaaaatacaaaaaaattagcctggcatgatgttgcatgcctgtgatcccagctactcaggaggctgaggtaggagaatcacttgaccccaggaggcagaggttgcagtgagccgagatcgcgccattgcgctccagcctgggcgacagaacgagactatctcaaaaaaaaaaaaaaaaaaaaaaa >AI445342:1-300 (-) ccaggcgcagtggctcatgcttgtagtcccggcactttgggaggccaaggcgggcggatc-cgaggtcgggagttcgaggccagcctggccagcatggtgaaaccccgtgtatattaaaaatgcagaaaaattggcctggcgtgatgttgcgtgcctgtgatcccagctactcgggaggctgaggtaggagaatcgcttgaccccgggaggcagaggttgcagtgagccgagatcgcgccattgcgctccagcctgggcgacagaacgagactatctcaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: AI865570, type: ag Aligns to: chr5:58458788-58459046 (--) All mismatches: ag (13), ag (14), ag (30), ag (46), ag (80), ag (84), ag (88), ag (93), ag (110), ag (119), ag (133), ag (137), ag (157), ag (180), ag (199), ag (204), Editing mismatches: 16, all mismatches: 16, alignment length: 259, cluster length: 192, total number of As: 62 Locations in RNA: 13 14 30 46 80 84 88 93 110 119 133 137 157 180 199 204 Locations in genome: 58458800 58458801 58458817 58458833 58458867 58458871 58458875 58458880 58458897 58458906 58458920 58458924 58458944 58458967 58458986 58458991 Upstream nucleotide (in genome): a c a c a c g a a c g c a a c a Upstream nucleotide summary: a: 8, c: 6, g: 2, t: 0, other: 0 Downstream nucleotide (in genome): g a c t a c g g t t g t a a g g Downstream nucleotide summary: a: 4, c: 2, g: 6, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 3, at: 1, ca: 1, cc: 1, cg: 1, ct: 3, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr5:58458788-58459046 (-) tcccacagcactttgggtggccgaggcaggcggatcgattgaggccaggagttcaagatcagcctgggcaacatggtgaaacccccgtctctactgaaaaaaaaaaaaaaaagtagccaggcatggaggcatggtggcacatgcctgtaatcccagctacttgggaagctgaggcacgaaaatggcttgaacccgggaggcagaggtgagatcatgccactgtactccaacctgggtgacagagcaagactctgcctcg >AI865570:1-259 (-) tcccacagcactttgggtggccgaggcaggcggatcgattgaggccaggagttcaggatcggcctgggcaacatggtgagacccccgtctctactgaaaaaagaaaaaaaaagtagccaggcgtgggggcatggtggcacgtgcctgtagtcccagctacttgggaggctggggcgcgagaatggcttgaacccgggaggcagaggtgagatcgtgccactgtactccagcctgggtgacagagcgggactctgcctcg End editing Edited EST: BQ775094, type: ag Aligns to: chr6:150045457-150045975 (--) All mismatches: ag (307), ag (308), ag (310), ag (315), ag (316), ag (347), ag (348), ag (365), ag (376), ag (377), ag (378), ag (388), ag (408), ag (412), ag (417), ag (418), ag (420), ag (428), ag (444), ag (455), ag (460), ag (461), ag (480), ag (488), ag (489), ag (509), ag (511), Editing mismatches: 27, all mismatches: 27, alignment length: 518, cluster length: 205, total number of As: 65 Locations in RNA: 307 308 310 315 316 347 348 365 376 377 378 388 408 412 417 418 420 428 444 455 460 461 480 488 489 509 511 Locations in genome: 150045747 150045748 150045750 150045755 150045756 150045787 150045788 150045805 150045816 150045817 150045818 150045828 150045848 150045852 150045857 150045858 150045860 150045868 150045884 150045895 150045900 150045901 150045920 150045928 150045929 150045949 150045951 Upstream nucleotide (in genome): a a c a a a c c a a c g t c a t t c t a a a g a c g a Upstream nucleotide summary: a: 13, c: 7, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): c a a g a g a g c a a g c g t a t g a a t a a c a g g Downstream nucleotide summary: a: 12, c: 4, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 5, ac: 3, ag: 3, at: 2, ca: 4, cc: 0, cg: 3, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 2, tc: 1, tg: 0, tt: 1, other: 0 >chr6:150045457-150045975 (-) aggtgggtgaagcacctgaggtcaagagttcgagatcagcctggccaacatggcgaaaccccgtctccactaaaaatgcaaaaaaaaaattaaccgggcgtggtggcaggcatctataatcccagctacttgggaggctgaggcaggagaattgctcaaacccgggaggcagaggttgcagtgacccaagatcgtgccacttcactccagcctgggcaaaagagcaaaacgccatctcaaaaaatatacatatataaggagataaagtttcccattttccaatacagtttcacatttgaacagccctaattgatacaactttatggcagggttttagtgtgtgagtgggatccaaaacactcaatcctgtaaaagggtacagtcctattgtatgttaacacactgatgatgtgagcctgtgagatgagccaatcaccagttgttatgttcgaatctgctttgtgttgggacgctttaatgtcagggtttcactaaataaatgaattttcatatactgaa >BQ775094:17-534 (-) aggt-ggtgaagcacctgaggtcaggggttcgagatcagcctggccggcatggcggaaccccgtctccactaaaggtgcagaaaaaaaattgaccgggcgtggtggcgggcatctgtggtcccggctgcttgggaggctgaggcaggggaattgctcgggcccgggaggcggaggttgcagtgacccgggatcgtgccacttcactccagcctgggcaagggagcgaggcgccatctcaaaaaatatacatatataaggagataaagtttcccattttccaatacagtttcacatttgaacagccctaattgatacaactttatggcagggttttagtgtgtgagtgggatccaaaacactcaatcctgtaaaagggtacagtcctattgtatgttaacacactgatgatgtgagcctgtgagatgagccaatcaccagttgttatgttcgaatctgctttgtgttgggacgctttaatgtcagggtttcactaaataaatgaattttcatatactgaa End editing Edited EST: AA635901, type: ag Aligns to: chr6:30707157-30707456 (--) All mismatches: ag (58), ag (147), ag (155), ag (166), ag (167), ag (169), ag (173), ag (185), ag (190), ag (217), ag (218), ag (253), ag (256), ag (261), ag (262), Editing mismatches: 15, all mismatches: 15, alignment length: 300, cluster length: 205, total number of As: 59 Locations in RNA: 58 147 155 166 167 169 173 185 190 217 218 253 256 261 262 Locations in genome: 30707214 30707303 30707311 30707322 30707323 30707325 30707329 30707341 30707346 30707373 30707374 30707409 30707412 30707417 30707418 Upstream nucleotide (in genome): g t t a a a t a t a c c c a t Upstream nucleotide summary: a: 6, c: 3, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g t g t a a c a g g a c g t a Downstream nucleotide summary: a: 5, c: 2, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 1, at: 2, ca: 1, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 2, tt: 1, other: 0 >chr6:30707157-30707456 (-) agagaaaaaaaaggccacgcgcggtggctcatgcctgtaatcccagcactttggtaggccaaggcaggtggatcacaaggtcaagagttcgagactagcctggccaacatagtgaaaccctgtttctactaaaaatacaaaaattagccaggtatggtggcacgcacctgtagtcccagctacttgggaggctgaggccggagaattgcttgaacccgggagacagaggttgcagtgagctgagaccacgccattgcactccagcctgggtgacagagtgagactccatctcaaaaaaag >AA635901:1-300 (-) agagaaaaaaaaggccacgcgcggtggctcatgcctgtggtcccggcgctttggtaggccaaggcaggtggatcacaaggtcgggagttcgagactagcctggccaacatggtgagaccctgtttctgctagaggtacaaaaattggccaggtgtggtggcacgcacctgtagtcccagctacttgggaggctgaggccggagaattgcttgaacccgggagacagaggttgcagtgagctgggaccacgccattgcactccagcctgggtgacagagtgagactccatctcaaaaaaag End editing Edited EST: BF930556, type: ag Aligns to: chr7:78946444-78946755 (--) All mismatches: ag (13), ag (14), ga (18), ag (19), ga (21), ag (22), ag (45), ag (46), ag (62), ag (72), ag (85), ag (86), ag (87), ag (102), ag (109), ag (122), ag (127), ag (128), ag (136), ag (151), ag (155), ag (165), Editing mismatches: 20, all mismatches: 22, alignment length: 312, cluster length: 153, total number of As: 51 Locations in RNA: 13 14 19 22 45 46 62 72 85 86 87 102 109 122 127 128 136 151 155 165 Locations in genome: 78946444 78946445 78946450 78946454 78946476 78946477 78946493 78946503 78946516 78946517 78946518 78946533 78946540 78946553 78946558 78946559 78946567 78946582 78946586 78946596 Upstream nucleotide (in genome): a g c g a t t t a a a a a c a c c c c g Upstream nucleotide summary: a: 8, c: 6, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): n a g g t a g g a a a a g g g a g g g g Downstream nucleotide summary: a: 7, c: 0, g: 11, t: 1, other: 1 Dinucleotide summary: aa: 4, ac: 0, ag: 2, at: 1, ca: 1, cc: 0, cg: 5, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 1 >chr7:78946444-78946755 (-) tcagtgtattctattggacagtcagtgcattatatactctgacttcagtttggcatctcaatttttgacaataacatatgaggggaaatcagaagcctttctaaaagctacagtttggctgggcgtgcaggctcatgcctgtaatcccaacactttgggaggccgaggcaggcagatcacctgaggtcaggcgttcaagaccagcctgaccaataaggtgaaaacccgtctctactaaaaatacaaaaaattagccgggattagtggcacatgcctgtaatcctagctactcaggagg-ctgagacaggagaa >BF930556:13-324 (-) tcagtgtattctattggacagtcagtgcattatatactctgacttcagtttggcatctcaatttttgacaataacatatgaggggaaatcagaagcctttctaaaagctacagtttggctgggcgtgcaggctcatgcctgtaatcccaacactttggggggccgaggcgggcggatcacctgaggtcgggcgttcgggaccggcctgaccaatagggtgaagacccgtctctactagggatacaaaaaattggccgggattggtggcacatgcctgtggtcctagctactcaggaggnctgga-cgagaggg End editing Edited EST: AW078904, type: ag Aligns to: chr7:129670052-129670354 (--) All mismatches: ag (49), ag (74), ag (94), ag (100), ag (113), ag (117), ag (126), ag (127), ag (156), ag (182), ag (215), ag (221), ag (245), Editing mismatches: 13, all mismatches: 13, alignment length: 303, cluster length: 197, total number of As: 57 Locations in RNA: 49 74 94 100 113 117 126 127 156 182 215 221 245 Locations in genome: 129670100 129670125 129670145 129670151 129670164 129670168 129670177 129670178 129670207 129670233 129670266 129670272 129670296 Upstream nucleotide (in genome): c c a c c t a t a a a g g Upstream nucleotide summary: a: 5, c: 4, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): c g t g g c t a t c g g g Downstream nucleotide summary: a: 1, c: 3, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 3, ca: 0, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr7:129670052-129670354 (-) ttaaagctgattcagggctgggcgtggtgacttacgcctgtaatctcagcactttgggaggccaaggtgggtggatcacctgaggccaagagttaaagatcagcctggccaacatgatgaaaccctgtctttattaaaaatagaaaaattaaccaggtgtggtgtcaggcacctgtaatcccggctactcaggaggctgaggcaggagaattgcttgaacctgggaggcagaggttgcagtgagccgtgatcgcaccattgcactgcagcctgggcgacagagcaaaaactctgtctcggaaa >AW078904:1-303 (-) ttaaagctgattcagggctgggcgtggtgacttacgcctgtaatctcagcactttggggggccaaggtgggtggatcacctggggccaggagttaaagatcagcctggccaacatgatgaagccctgtctttattaaaaatagaaaagttaaccaggtgtggtgtcaggcacctgtggtcccggctgctcgggaggctgaggcgggagagttgcttgaacctgggaggcggaggttgcagtgagccgtgatcgcgccattgcactgcagcctgggcgacagagcaaaaactctgtctcggaaa End editing Edited EST: AA552186, type: ag Aligns to: chr7:56108915-56109208 (--) All mismatches: ag (34), ag (77), ag (88), ag (103), ag (113), ag (120), ag (124), ag (136), ag (148), ag (169), ag (185), ag (195), ag (218), ag (257), Editing mismatches: 14, all mismatches: 14, alignment length: 294, cluster length: 224, total number of As: 61 Locations in RNA: 34 77 88 103 113 120 124 136 148 169 185 195 218 257 Locations in genome: 56108948 56108991 56109002 56109017 56109027 56109034 56109038 56109050 56109062 56109083 56109099 56109109 56109132 56109171 Upstream nucleotide (in genome): t c a c g t c c c a a a a c Upstream nucleotide summary: a: 5, c: 6, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g g c g g t g c t a c c g g Downstream nucleotide summary: a: 1, c: 4, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 1, at: 0, ca: 0, cc: 1, cg: 4, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 1, tt: 1, other: 0 >chr7:56108915-56109208 (-) ctccaggccagactaggtggctcatgcctgtaatcccagcacttcgggaggcctaggcgggcagatcacaaggtcaagagatcgagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggcatggtggcaggcacctgtggtcccagctatttgggaggctgaggcagaagaatcgcttgaacctgggaggcagaggttgcagtgagctgagattgtgccactgcactccagcctaggccacagagcgagattctgtctcaaaaaaaaa >AA552186:1-294 (-) ctccaggccagactaggtggctcatgcctgtaatcccggcacttcgggaggcctaggcgggcagatcacaaggtcaggagatcgagaccatcctggccagcatggtgaagccccatctctactaagaatacaaaaattagctgggcgtggtggcaggcgcctgtggtcccggctgtttggggggctgaggcggaagaatcgcttgagcctgggaggcggaggttgcagtgagctgagattgtgccactgcactccagcctgggccacagagcgagattctgtctcaaaaaaaaa End editing Edited EST: AI678333, type: ag Aligns to: chr7:55525323-55525649 (--) All mismatches: ag (24), ag (49), ag (55), ag (72), ag (79), ag (94), ag (97), ag (98), ag (143), ag (147), ag (152), ag (158), ag (161), ag (162), ag (179), ag (213), ag (214), ag (225), ag (248), ag (252), ag (270), ag (277), ag (279), ag (291), ag (292), ag (295), ag (298), ag (309), ag (310), ag (311), ag (315), ag (316), Editing mismatches: 32, all mismatches: 32, alignment length: 327, cluster length: 293, total number of As: 137 Locations in RNA: 24 49 55 72 79 94 97 98 143 147 152 158 161 162 179 213 214 225 248 252 270 277 279 291 292 295 298 309 310 311 315 316 Locations in genome: 55525346 55525371 55525377 55525394 55525401 55525416 55525419 55525420 55525465 55525469 55525474 55525480 55525483 55525484 55525501 55525535 55525536 55525547 55525570 55525574 55525592 55525599 55525601 55525613 55525614 55525617 55525620 55525631 55525632 55525633 55525637 55525638 Upstream nucleotide (in genome): t c a c t a a a a c a t a a a a t c a c a c a a a a c a a t a t Upstream nucleotide summary: a: 19, c: 7, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): g a a g g t a a g t g g g a a t a a a g g g c g a c a a a a g a Downstream nucleotide summary: a: 15, c: 2, g: 12, t: 3, other: 0 Dinucleotide summary: aa: 9, ac: 2, ag: 6, at: 2, ca: 3, cc: 0, cg: 3, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 3, tc: 0, tg: 3, tt: 0, other: 0 >chr7:55525323-55525649 (-) gggactatattaagctaaaaagattctgcaaaacaaaggaaacagtcaacagagtgaagagacaatctgtagaacaggaaaatatgtgcaaactatttatccaacaagggactaatattgagaatatacaaggaattcaacagcaaaaaaaaaatcccttttaaaaagtaggcaaaggacatgaagagacatttctcaaaagaagacatacaaatggccaagtatatgaaaaaatgtttaacatcactagccatcagggaaatgcatatcaaaaccacaatgagatatcaccttaccccacttagaatgactattattaaaaagacc >AI678333:1-327 (-) gggactatattgggctgggaagattctgcgaagcaggggaaacagtcagcggagtgaggagacaatctgtagaacgggagaatatgtgcaaactatttatccgacaagggactggtattgagaatatacaaggaattcaacagcaaaagaaaaatcccttttaaagggtgggcaagggacgtgaggagacatttctcaaaagaagacatacaaatggccaagtatatgaggaagtgtttaacatcactggccatcggggaaatgcatatcaagaccacgatgagatatcaccttaccccacttggaatgactattattaaaaagacc End editing Edited EST: CA422382, type: ag Aligns to: chr8:11700142-11700716 (--) All mismatches: ga (1), ga (7), ag (67), ag (72), ag (77), ag (88), ag (90), ag (113), ag (142), ag (153), ag (161), ag (164), ag (169), ag (177), ag (179), ag (181), ag (182), ag (186), ag (197), ag (198), ag (199), ag (205), ag (207), ag (208), ag (237), ag (247), ag (285), ag (286), ag (294), ag (311), ag (314), ag (317), ag (318), ag (321), ag (322), ag (380), ag (385), ag (389), ga (401), ag (445), ag (449), ag (454), ag (455), ag (465), ag (473), ag (481), ag (485), ag (486), ag (490), ag (499), ag (505), ag (535), ag (536), ag (544), ag (566), Editing mismatches: 52, all mismatches: 55, alignment length: 575, cluster length: 500, total number of As: 153 Locations in RNA: 67 72 77 88 90 113 142 153 161 164 169 177 179 181 182 186 197 198 199 205 207 208 237 247 285 286 294 311 314 317 318 321 322 380 385 389 445 449 454 455 465 473 481 485 486 490 499 505 535 536 544 566 Locations in genome: 11700208 11700213 11700218 11700229 11700231 11700254 11700283 11700294 11700302 11700305 11700310 11700318 11700320 11700322 11700323 11700327 11700338 11700339 11700340 11700346 11700348 11700349 11700378 11700388 11700426 11700427 11700435 11700452 11700455 11700458 11700459 11700462 11700463 11700521 11700526 11700530 11700586 11700590 11700595 11700596 11700606 11700614 11700622 11700626 11700627 11700631 11700640 11700646 11700676 11700677 11700685 11700707 Upstream nucleotide (in genome): c g g g c g a c c a t t a a a t a a g c a c g c a c c a a a a a a c c g t c a t c c t a a t t c a c c c Upstream nucleotide summary: a: 19, c: 18, g: 7, t: 8, other: 0 Downstream nucleotide (in genome): c g g g g g t c t g g c t a a c c a a c c a g g g a g a a a a a a g a g c g t a c t g a a c c c g a g a Downstream nucleotide summary: a: 18, c: 12, g: 17, t: 5, other: 0 Dinucleotide summary: aa: 11, ac: 2, ag: 3, at: 3, ca: 5, cc: 5, cg: 6, ct: 2, ga: 1, gc: 0, gg: 6, gt: 0, ta: 1, tc: 5, tg: 2, tt: 0, other: 0 >chr8:11700142-11700716 (-) tgggaggccaaggtgggaggatgacaaggtcaggagttcaagaccagcctggccaacatgctgaaacctcacctctactaaaaatacaaaaattagctgggcatggtggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccaagacagtgccagtgcactccagcctcggtgacagcgcaaggctccgtctcaataattaaaaaaaaaaaaaaaaaaaaaaaggccgggcgcagtggctcaagcctgtaatcccagcactttgggaggctgaggcgggcagatcacctgaggtcaggagttttgagatcagccttggcaacacggtgaaaccccatctctactaaaaatacaaaattagccaagcatgctggcacatgcctgtaatcccagctactcgggaggctgaggtacgagaatcgcttgaacctgggaggcagaggatgcagtgagccgagatcacgccattgcactccagcctgggggacaagagtgaatctgtgtctcaccaaaaaaaaaaagaaaaag >CA422382:1-575 (-) tgggaggccgaggtgggaggatgacaaggtcgggagttcgggaccagcctggccaacatgctgaaacctcgcctctgctaaaaatgcaaggattggctgggcgtggtggcgcatgcctgtggtcccggctgcttgggaggctgaggcaggagaatcgcttgaacccgggaggcgaaggttgcagtgggccgagacggtgccagtgcactccagcctcggtgacagcgcaaggctccgtctcaataattaaaaaggaaggaagaagaaaaaaggccgggcgcggtggctcgggcctgtaatcccagcactttgggaggctgaggcgggcggatcacctggggtcaggagttttgagatcagccttggcggcgcggtggggccccatctctgctaggagtgcaaaattggccaggcgtgctggcgcatgcctgtagtcccagctactcgggaggctgaggtacgggaatcgcttgaacctgggaggcgggggatgcagtgggccgggatcgcgccattgcactccagcctgggggacaagagtgaatctgtgtctcnccaaaaaaaaaaaaaaaaaa End editing Edited EST: AA053401, type: ag Aligns to: chr8:134291144-134291576 (--) All mismatches: ag (53), tc (60), ag (104), ag (106), ag (137), ag (138), ag (146), ag (158), ag (159), ag (163), ag (165), ag (166), ag (167), ag (172), ag (190), ga (207), ag (208), ag (217), ag (222), ag (232), ag (240), ag (257), Editing mismatches: 20, all mismatches: 22, alignment length: 434, cluster length: 205, total number of As: 61 Locations in RNA: 53 104 106 137 138 146 158 159 163 165 166 167 172 190 208 217 222 232 240 257 Locations in genome: 134291196 134291247 134291249 134291280 134291281 134291289 134291301 134291302 134291306 134291308 134291309 134291310 134291315 134291333 134291351 134291360 134291365 134291375 134291383 134291400 Upstream nucleotide (in genome): c g g a t c a a t a a a t a g c g c g t Upstream nucleotide summary: a: 7, c: 4, g: 5, t: 4, other: 0 Downstream nucleotide (in genome): c c g g a t a a c t a a c g g g g g g g Downstream nucleotide summary: a: 5, c: 4, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 2, at: 1, ca: 0, cc: 1, cg: 2, ct: 1, ga: 0, gc: 1, gg: 4, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr8:134291144-134291576 (-) gaaaggatgggagaggggctggaagcattggctagtagatgatcgaggctttctataccaccaccaaggtgtgtattttct-catcatcctggttgtgtcaggctgtccctagagatcaccctgacctcagtgtttaagaagaagggccagatgcagtggctcatgcctgtaatcctagcactttggaaggccgaggcaggcagatcacctgaggtcaggagctcgaggccagcctggccaacaaggagaaaccctgtctctactaaaaatacaaaaattagccaggcatggtggtaagcacctataaccccagctacttgggggctgagacaggagaattgcttgaacctgggaggcagaggttgcagtgagctgagaccac-gtcgttgcactccagcctgggcaacaagagtgaaactctgtctcaaaaaaa >AA053401:1-434 (-) gaaaggatgggagaggggctggaagcattggctagtagatgatcgaggctttctataccaccaccaaggtgtgtattttctccatcatcctggttgtgtcaggctgtccctagagatcaccctgacctcagtgtttaagaagaagggccagatgcagtggctcatgcctgtaatcctggcactttggaaggccggggcaggcggatcacctggggtcgggagctcngagccagcctggccaacagggagaaaccctgtctctgctaagggtgcaaggattagccaggcgtggtggtgggcacctataaccccagctacttgggggctggggcaggagaattgcttgaacctgggaggcagaggttgcagtgagccgagaccgctgt-gttgcactccagcctgggcaacaagagtgaaactctgtctcaaaaaaa End editing Edited EST: AA664197, type: ag Aligns to: chr8:11700468-11700739 (--) All mismatches: ag (54), ag (58), ag (59), ag (88), ag (102), ag (106), ag (128), ag (155), ag (164), ag (168), ag (170), ag (204), ag (209), ag (218), ag (239), ag (240), ag (262), ag (270), Editing mismatches: 18, all mismatches: 18, alignment length: 272, cluster length: 217, total number of As: 62 Locations in RNA: 54 58 59 88 102 106 128 155 164 168 170 204 209 218 239 240 262 270 Locations in genome: 11700521 11700525 11700526 11700555 11700569 11700573 11700595 11700622 11700631 11700635 11700637 11700671 11700676 11700685 11700706 11700707 11700729 11700737 Upstream nucleotide (in genome): c a c g c g a t t a t c a c a c t c Upstream nucleotide summary: a: 5, c: 7, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): g g a a g g t g c a a g g g g a a c Downstream nucleotide summary: a: 6, c: 2, g: 9, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 3, at: 1, ca: 2, cc: 1, cg: 4, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr8:11700468-11700739 (-) tcacgcctgtaatcccagcactttgggaggccaaggtgggaggatgacaaggtcaggagttcaagaccagcctggccaacatgctgaaacctcacctctactaaaaatacaaaaattagctgggcatggtggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccaagacagtgccagtgcactccagcctcggtgacagcgcaaggctccgtctcaataatta >AA664197:1-272 (-) tcgcgcctgtgatcccagcactttgggaggccggggtgggaggatgacaaggtcgggagttcaggaccggcctggccaacatgctgaaacctcacctctactgagaatgcaaaaattggctgggcatggtggcacatgcctgtagtcccagctacttgggaggctggggcgggagaatcgcttggacccgggaggcggaggttgcagtgagccgggacggtgccagtgcactccagcctcggtgacagcgcaaggctccgtctcaataatta End editing Edited EST: AA767961, type: ag Aligns to: chr8:48861030-48861304 (--) All mismatches: ag (19), ag (22), ag (23), ag (38), ag (63), ag (93), ag (128), ag (129), ag (137), ag (155), ag (162), ag (165), ag (167), ag (186), Editing mismatches: 14, all mismatches: 14, alignment length: 275, cluster length: 168, total number of As: 47 Locations in RNA: 19 22 23 38 63 93 128 129 137 155 162 165 167 186 Locations in genome: 48861048 48861051 48861052 48861067 48861092 48861122 48861157 48861158 48861166 48861184 48861191 48861194 48861196 48861215 Upstream nucleotide (in genome): a a g c g c a t c t a t a a Upstream nucleotide summary: a: 6, c: 3, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): a c a g g c t a t g a c t c Downstream nucleotide summary: a: 4, c: 4, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 0, at: 2, ca: 0, cc: 1, cg: 1, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr8:48861030-48861304 (-) cacgcctgtaatcccagcactttgggaggctgaggtgggcggatcacctgaggctgggagttcgagaccagcctgaccaacatggagaaaccccgtctctactaaaaaatacaaaaaattagctgggcgtggtggcgcatgcctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtgagctgagatcgcgccattgcactccagcctgggcgacaagaacaaaactctgtctcaaaaaaa >AA767961:1-275 (-) cacgcctgtaatcccagcactttgggaggctgaggtgggcggatcacctgaggctgggagttcgagaccagcctgaccaacatggagaagccccgtctctactaaaaagtgcagaaaattggctgggcgtggtggcgcgtgcctgtggtcccagctactcaggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgggctgagatcgcgccattgcactccggcctgggcgacaagggcagaactctgtctcaaaaaaa End editing Edited EST: AI038927, type: ag Aligns to: chr8:11700502-11700914 (--) All mismatches: ag (4), ag (14), ag (24), ag (25), ag (46), ag (53), ag (54), ag (62), ag (78), ag (85), ag (89), ag (94), ag (95), ag (105), ag (121), ag (126), ag (130), ag (136), ag (139), ag (150), ag (151), ag (160), ag (175), ag (184), ag (189), ag (205), ag (211), tg (226), ag (228), ag (236), cg (244), ag (285), ag (286), ag (400), Editing mismatches: 32, all mismatches: 34, alignment length: 413, cluster length: 397, total number of As: 114 Locations in RNA: 4 14 24 25 46 53 54 62 78 85 89 94 95 105 121 126 130 136 139 150 151 160 175 184 189 205 211 228 236 285 286 400 Locations in genome: 11700505 11700515 11700525 11700526 11700547 11700554 11700555 11700563 11700579 11700586 11700590 11700595 11700596 11700606 11700622 11700627 11700631 11700637 11700640 11700651 11700652 11700661 11700676 11700685 11700690 11700706 11700712 11700729 11700737 11700786 11700787 11700901 Upstream nucleotide (in genome): c c a c g a g a g t c a t c t a t t t a a a a c a a g t c a t t Upstream nucleotide summary: a: 12, c: 7, g: 4, t: 9, other: 0 Downstream nucleotide (in genome): g g g a g c a t g c g t a c g a c a c c a c g g g g g a c g a g Downstream nucleotide summary: a: 8, c: 8, g: 14, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 3, ag: 5, at: 2, ca: 1, cc: 2, cg: 4, ct: 0, ga: 1, gc: 0, gg: 3, gt: 0, ta: 4, tc: 3, tg: 2, tt: 0, other: 0 >chr8:11700502-11700914 (-) gtggtatgaggctagctctttccaaaagcattcaagtttggcttctgatgtgactcagaatttaggaaccagatgctagatcaaataagctctgaaaatctgaggaacattgtaggaaaggtttgttaagcatctcttaagtgccatgatgagcataacagccggccgtcgtggctcacgcctgtaatcccagcactttgggaggccaaggtgggaggatgacaaggtcaggagttcaagaccagcctggccaacatgctgaaacctcacctctactaaaaatacaaaaattagctgggcatggtggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgcagtgagccaagacagtgccagtgcactccagcc >AI038927:1-413 (-) gtggtatgaggctggctctttccaaaagcattcaagtttggcttctgatgtgactcagaatttaggaaccagatgctagatcaaataagctctgaaaatctgaggaacattgtaggaaaggtttgttgggcatctcttaagtgccatgatgagcataacagccggccgtggtggctcgcgcctgtgagcccagcactttggggggccagggtgggaggatgacagggtcgggagttcaggaccagcctggccagcatgctgaggcctcacctctgctgaaaatgcaagaattggctgggcatggtggcgcatgcctgtggtcccggctgcttggggggctgaggcaggagagtcgcttgggcccggggggcggaggttgcagtgagccgggacagtgccggtgcactccggcc End editing Edited EST: AI401796, type: ag Aligns to: chr8:54894330-54894658 (--) All mismatches: ag (44), ag (51), ag (56), ag (57), ag (60), ag (67), ag (73), ag (75), ag (86), ag (92), ag (108), ag (116), ag (121), ag (122), ag (223), ag (233), ag (251), Editing mismatches: 17, all mismatches: 17, alignment length: 329, cluster length: 208, total number of As: 66 Locations in RNA: 44 51 56 57 60 67 73 75 86 92 108 116 121 122 223 233 251 Locations in genome: 54894373 54894380 54894385 54894386 54894389 54894396 54894402 54894404 54894415 54894421 54894437 54894445 54894450 54894451 54894552 54894562 54894580 Upstream nucleotide (in genome): c g a t c g g a c g c c a t c c a Upstream nucleotide summary: a: 4, c: 7, g: 4, t: 2, other: 0 Downstream nucleotide (in genome): c g g a g g g g c g g g t a g c g Downstream nucleotide summary: a: 2, c: 3, g: 11, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 3, at: 1, ca: 0, cc: 3, cg: 4, ct: 0, ga: 0, gc: 0, gg: 4, gt: 0, ta: 2, tc: 0, tg: 0, tt: 0, other: 0 >chr8:54894330-54894658 (-) aaaaagtatttctgaaataataaaacttgaaagtcagttgggcatggtggccacacctgtaatcaaagcagtttgggaagccgagatgagcagatcacttgagtccaggaggtggagactagcccgggcaacatagcaagttcccatctctacaaaaaaaaaaaaaaaaaagaaaacttagctgggcatggtgtggtgcgttcctgtaatcccagctactcaggaggctgaggtgggaggatcactttaggccaagaggtggaggtttcagtaagctgagattgcaccactgcgctccagcgtgggtgacagagtgaaatcctgtctca >AI401796:1-329 (-) aaaaagtatttctgaaataataaaacttgaaagtcagttgggcatggtggccacacctgtaatcaaagcagtttgggaggccgagatgagcagatcgcttgagtccgggaggtggagactagcccgggcaacatagcaagttcccatctctacaaaaaaaaaaaaaaaaaagaaaacttagctgggcatggtgtggtgcgttcctgtggtcccggctactcgggaggctgaggtggggggatcgctttaggccagggggtgggggtttcggtgggctgggattgcgccactgcgctccagcgtgggtgacagagtgaaatcctgtctca End editing Edited EST: AI917107, type: ag Aligns to: chr8:144936767-144937116 (--) All mismatches: ag (156), ag (170), ag (178), ag (180), ag (185), ag (186), ag (190), ag (194), ag (201), ag (209), ag (210), ag (214), ag (270), ag (275), ag (279), ag (281), ag (284), ag (285), ag (288), ag (302), ag (325), ag (343), ag (348), ag (357), Editing mismatches: 24, all mismatches: 24, alignment length: 350, cluster length: 202, total number of As: 63 Locations in RNA: 156 170 178 180 185 186 190 194 201 209 210 214 270 275 279 281 284 285 288 302 325 343 348 357 Locations in genome: 144936909 144936923 144936931 144936933 144936938 144936939 144936943 144936947 144936954 144936962 144936963 144936967 144937023 144937028 144937032 144937034 144937037 144937038 144937041 144937055 144937078 144937096 144937101 144937110 Upstream nucleotide (in genome): c c c c a c g c g a c a t a t a a t t t c c c c Upstream nucleotide summary: a: 6, c: 11, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): a c c c g a g g g g a c g a c t a a c a a c g a Downstream nucleotide summary: a: 9, c: 7, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 2, at: 1, ca: 5, cc: 4, cg: 2, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr8:144936767-144937116 (-) gaggccaaggcgggcagatcacttgaggtcaggagttcaagaccagtatggccaacatggtaagaccctgtctctactaaaaatacaaaaattagctgggcgtgatgttgcttataatcacgggaggatgaggtgggagaatcactcgaacccaagaagtggaggttgcagtgagccaagatcacaccattgcactccagcctgagcaacagagtgagtgtccaccttggctcgtgggtgggaactcatgagcgcccactccaagctgtgtcctctcaaaaaaagtaaataaagtctgctggtgaggaattttacacatataaatacataaaatatttgatttgagttta >AI917107:14-363 (-) gaggccgaggcgggcggatcgcttgaggtcaggagttcgagaccagtatggccaacatggtgagaccctgtctctgctggaagtgcaagaattggctgggcgtgatgttgcttataatcacgggaggatgaggtgggagaatcactcgagcccgggaagtgggggttgcggtgggccgggatcgcgccattgcgctccagcctgagcgacagagtgagtgtccaccttggctcgtgggtgggaactcatgagcgcccactccaagctgtgtcctctcaaaaaaagtaaataaagtctgctggtgaggaattttacacatataaatacataaaatatttgatttgagttta End editing Edited EST: N23883, type: ag Aligns to: chr9:136034362-136034618 (--) All mismatches: ag (39), ag (47), ag (66), ag (71), ag (80), ag (99), ag (103), ag (126), ag (161), ag (170), ag (176), ag (206), Editing mismatches: 12, all mismatches: 12, alignment length: 258, cluster length: 167, total number of As: 52 Locations in RNA: 39 47 66 71 80 99 103 126 161 170 176 206 Locations in genome: 136034400 136034408 136034426 136034431 136034440 136034459 136034463 136034486 136034521 136034530 136034536 136034566 Upstream nucleotide (in genome): c c t a c c g t t t c a Upstream nucleotide summary: a: 2, c: 5, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): c c c g g g g g c a t g Downstream nucleotide summary: a: 1, c: 4, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 0, cc: 2, cg: 2, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr9:136034362-136034618 (-) cccagcactttgggaggccgaggctggtggatcacttgagctcaggagttcaagaccagcctggccaacatgatgaaaccccatctctaataaaaatacaaaaattggcggggtgtggtggcacacacctgtagtcccagctacttgggaggctgaggcaggagaatcacttgatcccaggaggctaaggttacagtgagccaagatc-acaccactgcactccagctgggatgacaaggttactgagactccatcta >N23883:1-258 (-) cccagcactttgggaggccgaggctggtggatcacttgagctcaggagttcaggaccagcctggccaacatgatgaaaccccgtctctgataaaaatgcaaaaattggcggggtgtggtggcacacacctgtggtcccagctacttgggaggctggggcgggagaatcacttgatcccgggaggctagggttgcagtgagccaagatcnacgccactgcgctccagctgggatgacaaggttactgagactccatcta End editing Edited EST: DB330266, type: ag Aligns to: chr9:126461991-126462532 (--) All mismatches: ag (59), ag (60), ag (72), ag (83), ag (98), ag (115), ag (125), ag (135), ag (151), ag (180), ag (200), ag (224), ag (266), ag (268), Editing mismatches: 14, all mismatches: 14, alignment length: 542, cluster length: 210, total number of As: 53 Locations in RNA: 59 60 72 83 98 115 125 135 151 180 200 224 266 268 Locations in genome: 126462049 126462050 126462062 126462073 126462088 126462105 126462115 126462125 126462141 126462170 126462190 126462214 126462256 126462258 Upstream nucleotide (in genome): a t c a c t t c t a c c c c Upstream nucleotide summary: a: 3, c: 7, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g a a c g c a c g c g c c c Downstream nucleotide summary: a: 3, c: 7, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 0, ca: 1, cc: 4, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr9:126461991-126462532 (-) aatctgtatgaagatttttgtggcaaagaacttaggcaaaataactttttaaaagaagaataaagttggaggacacatattacctgatctccagttttattgtagagctacagtaattgagacattgtggtattggcacaagggtagaccatacggattagtagaacagaatagagaatcaactgatatctagatatattttttagaaaggtgccaaggtaattcaaagggtagtctgttaaaaaatgaaagggtagggcaggcatagtggctcacacctgtaatcccagcactttgggaggctgaggtgggtggatcacctgaggttgggagtttgagaccagcctggccaacatggcgaaactccgtctcttctgaaaatacaaaaattagctgggtgtgttggcacatgcctgtaatcccagctacttgggaggctgaggcaggagaattgcttgaacctgggaggcaaaggttgcagtaagctgagatcacgccactgcactccagcctgggtgacagagcgagactctgtctccaat >DB330266:1-542 (-) aatctgtatgaagatttttgtggcaaagaacttaggcaaaataactttttaaaagaagaataaagttggaggacacatattacctgatctccagttttattgtagagctacagtaattgagacattgtggtattggcacaagggtagaccatacggattagtagaacagaatagagaatcaactgatatctagatatattttttagaaaggtgccaaggtaattcaaagggtagtctgttaaaaaatgaaagggtagggcaggcatagtggctcgcgcctgtaatcccagcactttgggaggctgaggtgggtggatcgcctgaggttgggagtttgagaccggcctggccaacatggcgaagctccgtctcttctgaaaatacaaaaattggctgggtgtgttggcgcatgcctgtgatcccagctgcttgggaggctgaggcgggagaattgcttgagcctgggaggcgaaggttgcagtgggctgagatcacgccactgcactccagcctgggtgacagagcgagactctgtctccaat End editing Edited EST: DB343277, type: ag Aligns to: chrX:108900460-108900937 (--) All mismatches: ag (41), ag (55), ag (68), ag (72), ag (74), ag (86), ag (119), ag (122), ag (125), ag (168), ag (171), ag (179), ag (198), ag (217), ag (219), ag (229), ag (301), ag (327), ag (328), ag (343), ag (357), ag (359), ag (371), ag (372), ag (382), ag (384), ag (385), ag (395), ag (403), ag (407), ag (416), ag (417), ag (418), ag (423), ag (430), ag (441), ag (447), ag (449), ag (475), Editing mismatches: 39, all mismatches: 39, alignment length: 478, cluster length: 435, total number of As: 156 Locations in RNA: 41 55 68 72 74 86 119 122 125 168 171 179 198 217 219 229 301 327 328 343 357 359 371 372 382 384 385 395 403 407 416 417 418 423 430 441 447 449 475 Locations in genome: 108900500 108900514 108900527 108900531 108900533 108900545 108900578 108900581 108900584 108900627 108900630 108900638 108900657 108900676 108900678 108900688 108900760 108900786 108900787 108900802 108900816 108900818 108900830 108900831 108900841 108900843 108900844 108900854 108900862 108900866 108900875 108900876 108900877 108900882 108900889 108900900 108900906 108900908 108900934 Upstream nucleotide (in genome): a t a c c t t c t c c a g t c t t a t a c c a t t a t t a a a a c a t t t c a Upstream nucleotide summary: a: 13, c: 10, g: 1, t: 15, other: 0 Downstream nucleotide (in genome): a t c c c a g t g c t g g g t t g a a t t c g a g t a t c c g a a g t t t t t Downstream nucleotide summary: a: 8, c: 7, g: 10, t: 14, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 4, at: 3, ca: 1, cc: 4, cg: 0, ct: 5, ga: 0, gc: 0, gg: 1, gt: 0, ta: 4, tc: 0, tg: 5, tt: 6, other: 0 >chrX:108900460-108900937 (-) ataatgctgctgtaaagacacatgcacacatatgtttattgcagcactattcacaagagcaaagacttggaaccaacccagatatccatcaataatagactggattaagaaaatgtggcacatatacaccatggaatactatgcagccataaaaaaggatgagttcatgtcctttgtagggacatggatgaagctggaaaccatcattctcagcaaactatcgcaaggacaaaaaaccaaacaccgcatattctcactcataggtgggaattgaacaacgagaacacttggacacaggaaggggaacatcacacactggggcctgttgtggggtggggggacgggggagggatagcattaggagatatacctaatgttaaatgatgaggattaatgggtgcagcacaccaacatggcacatgtatacatatgtaacaaacctgcatgttgtgcacatgtaccctagaacttaaagtat >DB343277:1-478 (-) atagtgntnctgtaaagacacatgcacacgtgtgtttgttgcagcactgttcacaggagcgggnacttggagccagcccagatgtccatcaatggtggactggattgggaaaatgtggcgcgtatacaccatggagtactatgcagccatggaaaaggatgagttcatgtcctttgtggggacatggatgaagctggaaaccatcattctcagcaaactatcgcaaggacaaaaaaccaaacaccgcatgttctcactcgtgggtgggaattgaacaacgggaacacttggacacaggagggggaacgtcgcacactggggcctgttgtggggtggggggacgggggagggatggcgttgggagatatacctaatgttaaatgatgaggattgatgggtgcagcgcgccagcatggcacatgtgtacatatgtaacagacctgcatgttgtgcacatgtaccctagaacttaaagtat End editing Edited EST: DB295315, type: ag Aligns to: chrX:73445315-73445724 (--) All mismatches: ag (48), ag (57), ag (81), ag (109), ag (133), ag (149), ag (166), ag (177), ag (202), ag (203), ag (211), ag (230), ag (256), ag (257), ag (273), tg (391), Editing mismatches: 15, all mismatches: 16, alignment length: 410, cluster length: 226, total number of As: 60 Locations in RNA: 48 57 81 109 133 149 166 177 202 203 211 230 256 257 273 Locations in genome: 73445362 73445371 73445395 73445423 73445447 73445463 73445480 73445491 73445516 73445517 73445525 73445544 73445570 73445571 73445587 Upstream nucleotide (in genome): t g a c c t t a a c c c a t c Upstream nucleotide summary: a: 4, c: 6, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g g c g g g c c g a g g t a g Downstream nucleotide summary: a: 2, c: 3, g: 9, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 1, ca: 1, cc: 0, cg: 5, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chrX:73445315-73445724 (-) ttttaatttttgtgactcttcaaatgccataatttctcttttgtttgtgaaggatagttttgctagatacagaatttgcagttggcattctttttactttagcagtttgaaaatatttcccattgttggccgggcacagtggctcacacctgtaatcctagcactttgggaggccgaggcaggcggatcatctgaggtcaggagttcaagaccagcctggccaatatggtgaaaccctgtttctactaaaatataaaaattagctgggcatgatggcaggtgcctctaatcccagctactcaggaggctgagatgggagaatcgcttgaacccgggagatgatggctgtggtgagccgagatagcgccgctgcactccagcctgggcggctgagtgagactccatccccg >DB295315:1-410 (-) ttttaatttttgtgactctgcaaatgccataatttctcttttgtttgtgaaggatagttttgctagatacagaatttgcagttggcattctttttactttagcagtttgaaaatatttcccattgttggccgggcacggtggctcacacctgtggtcctagcactttgggaggccgaggcgggcggatcatctgaggtcgggagttcgggaccagcctggccaatatggtgaagccctgtttctgctaaaatataaaaattggctgggcatgatggcgggtgcctctaatcccagctactcgggaggctgagatgggagaatcgcttgagcccgggagatgatggctgtggtgggccgagatggcgccgctgcactccagcctgggcggctgagtgagactccatccccg End editing Edited EST: BQ358323, type: ag Aligns to: chrX:2824199-2824479 (--) All mismatches: ag (10), tc (11), ta (23), ag (40), ag (47), ag (55), ag (88), ag (101), ag (112), ag (118), ag (140), ag (144), ag (155), ag (167), ag (178), ag (186), ag (234), ag (235), ag (248), ag (256), ag (263), Editing mismatches: 19, all mismatches: 21, alignment length: 280, cluster length: 254, total number of As: 73 Locations in RNA: 10 40 47 55 88 101 112 118 140 144 155 167 178 186 234 235 248 256 263 Locations in genome: 2824209 2824239 2824246 2824254 2824287 2824300 2824311 2824317 2824339 2824343 2824354 2824366 2824377 2824385 2824433 2824434 2824447 2824455 2824462 Upstream nucleotide (in genome): t c a a g g c t t t a c c g a t c a c Upstream nucleotide summary: a: 5, c: 6, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): a c g t g g g g g g a t g g g a c t c Downstream nucleotide summary: a: 3, c: 3, g: 10, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 2, ca: 0, cc: 3, cg: 2, ct: 1, ga: 0, gc: 0, gg: 3, gt: 0, ta: 2, tc: 0, tg: 3, tt: 0, other: 0 >chrX:2824199-2824479 (-) caggcacggtgactcacacctgtaatcccagcactttgggaggctaaggtgggaggatcacttgagcctaggagttagacacctacccagcctgagcaacacagtgagacctcatctctacaaaaaacaaataattagctagatgtcgtggcgcacagctgtagtctcagctacttaggaggctgaggcgggaggattatttgagcctgggaggtcaaaactgcaatgagctaagattgcactactgcactccggg-ctgggagacagagtaagaccctgcc >BQ358323:1-280 (-) caggcacggtgactcacgcctgtagtcccagcgctttgggaggctggggtgggaggatcacttgagcctaggagttagacacctacccagcctgggcaacacggtgagacctcgtctctacaaaagacaaataattggctggatgtcgtggcgcacagctgtggtctcggctacttagggggctgaggcggggggattatttgagcctgggaggtcaaaactgcagtgagctaggattgcgctactgcac-ccgggacagggagacagagcgagacc-tgcc End editing Edited EST: AA653082, type: ag Aligns to: chrX:73445292-73445568 (--) All mismatches: ag (73), ag (80), ag (104), ag (113), ag (121), ag (132), ag (145), ag (156), ag (172), ag (189), ag (200), ag (210), ag (220), ag (223), ag (225), ag (226), ag (234), ag (239), ag (253), gc (255), Editing mismatches: 19, all mismatches: 20, alignment length: 277, cluster length: 181, total number of As: 50 Locations in RNA: 73 80 104 113 121 132 145 156 172 189 200 210 220 223 225 226 234 239 253 Locations in genome: 73445364 73445371 73445395 73445404 73445412 73445423 73445436 73445447 73445463 73445480 73445491 73445501 73445511 73445514 73445516 73445517 73445525 73445530 73445544 Upstream nucleotide (in genome): g g a a g c a c t t a a c g a c c g c Upstream nucleotide summary: a: 6, c: 6, g: 5, t: 2, other: 0 Downstream nucleotide (in genome): t g c t t g t g g c c t g c g a g g g Downstream nucleotide summary: a: 1, c: 4, g: 9, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 3, ca: 1, cc: 0, cg: 5, ct: 0, ga: 0, gc: 1, gg: 2, gt: 2, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chrX:73445292-73445568 (-) cctagcactttgggaggccgaggcaggcggatcatctgaggtcaggagttcaagaccagcctggccaatatggtgaaaccctgtttctactaaaatataaaaattagctgggcatgatggcaggtgcctctaatcccagctactcaggaggctgagatgggagaatcgcttgaacccgggagatgatggctgtggtgagccgagatagcgccgctgcactccagcctgggcggctgagtgagactccatccccgaaaaaaaaaaaagaaaagaaaag >AA653082:1-277 (-) cctagcactttgggaggccgagccgggcggatcatctggggtcgggagttcggggccggcctggccagtatggtgaagccctgtttctgctaaaatataaaaattggctgggcatgatggcgggtgcctctagtcccagctactcgggaggctgaggtgggagagtcgcttgagcccgggagatgatggctgtggtgggccgaggtagcgccgctgcactccagcctgggcggctgagtgagactccatccccgaaaaaaaaaaaagaaaagaaaag End editing Edited EST: BX341450, type: ac Aligns to: chr15:65871173-65871999 (++) All mismatches: ac (3), ac (8), ac (12), ac (15), ac (16), ac (29), ac (30), ac (31), ac (32), tg (35), ac (38), ac (39), ac (44), ac (45), ac (47), ac (51), ac (54), ac (55), ac (56), ac (57), ac (60), ac (64), ac (65), ac (67), tg (70), ac (71), ac (77), ac (88), ac (89), ac (95), ac (99), ac (100), ac (101), ac (108), ac (109), ac (110), ac (114), ac (131), ac (135), ac (138), ac (147), ac (155), tg (158), ac (163), ac (168), ac (171), ac (172), ac (176), ac (177), ac (184), ac (186), ag (205), ac (209), ac (216), ac (217), ac (219), ac (226), ac (233), ac (237), ac (238), ac (244), ac (246), ac (260), ac (270), ac (273), ac (274), ac (278), ag (289), ac (295), ac (298), ac (302), ac (306), ac (307), ac (315), ac (318), ac (319), ac (320), ac (328), ac (331), ac (336), ac (339), ac (342), ac (346), ac (353), ac (354), ac (359), ac (360), ac (361), ac (363), ac (366), ac (369), ac (370), ac (375), ac (378), ac (379), ac (383), ac (384), ac (385), ac (390), ac (391), ac (394), ac (398), ac (408), ac (410), ac (419), ac (421), ac (427), ac (429), ac (433), ac (437), ac (438), ac (439), ac (442), ac (446), ac (459), ac (463), ac (469), ca (761), Editing mismatches: 112, all mismatches: 118, alignment length: 829, cluster length: 465, total number of As: 142 Locations in RNA: 3 8 12 15 16 29 30 31 32 38 39 44 45 47 51 54 55 56 57 60 64 65 67 71 77 88 89 95 99 100 101 108 109 110 114 131 135 138 147 155 163 168 171 172 176 177 184 186 209 216 217 219 226 233 237 238 244 246 260 270 273 274 278 295 298 302 306 307 315 318 319 320 328 331 336 339 342 346 353 354 359 360 361 363 366 369 370 375 378 379 383 384 385 390 391 394 398 408 410 419 421 427 429 433 437 438 439 442 446 459 463 469 Locations in genome: 65871175 65871180 65871184 65871187 65871188 65871201 65871202 65871203 65871204 65871210 65871211 65871216 65871217 65871219 65871223 65871226 65871227 65871228 65871229 65871232 65871236 65871237 65871239 65871243 65871249 65871260 65871261 65871267 65871271 65871272 65871273 65871280 65871281 65871282 65871286 65871303 65871307 65871310 65871319 65871327 65871335 65871340 65871343 65871344 65871348 65871349 65871356 65871358 65871381 65871388 65871389 65871391 65871397 65871404 65871407 65871408 65871414 65871416 65871430 65871440 65871443 65871444 65871448 65871465 65871468 65871472 65871476 65871477 65871485 65871488 65871489 65871490 65871498 65871501 65871506 65871509 65871512 65871516 65871523 65871524 65871529 65871530 65871531 65871533 65871536 65871539 65871540 65871545 65871548 65871549 65871553 65871554 65871555 65871560 65871561 65871564 65871568 65871578 65871580 65871589 65871591 65871597 65871599 65871603 65871607 65871608 65871609 65871612 65871616 65871629 65871633 65871639 Upstream nucleotide (in genome): c t c t a t a a a g a c a g t c a a a c t a g t c c a t g a a g a a t t c c g g c c g a g a a a a g a g a c g a g g c g g a c c c c c a c g a a c c g c c t c a t a a a t g a c g a t a a c a c c c c c t t g c c a a c a g c c Upstream nucleotide summary: a: 39, c: 36, g: 22, t: 15, other: 0 Downstream nucleotide (in genome): t c t a t a a a g a t a g g c a a a g c a g g c c a g a a a g a a c g c g a c g t t a c a g a t c a g g g g a g g g g g a g g t g t a g g a a t t t a g g t a g a a a t t a t g a g a a g a c g a c t t c g g t a a a g g g g g Downstream nucleotide summary: a: 40, c: 13, g: 40, t: 19, other: 0 Dinucleotide summary: aa: 13, ac: 4, ag: 16, at: 6, ca: 9, cc: 3, cg: 13, ct: 11, ga: 12, gc: 1, gg: 9, gt: 0, ta: 6, tc: 5, tg: 2, tt: 2, other: 0 >chr15:65871173-65871999 (+) tcattttacacattaatggttgctctttaaaagttagaatctcaagagataccaaaagcacttaagagttaccaccacattttgcccaagttctaaggaaagttctgaaacttagtggtggtgtgtttgtactcagcaagctccagacagtctgagttgctcattccatgaacagaagcttgaaaatgcccttacagttgagatataaacgagggaagag-gtgaagctttcag-gaagccagagagcccctgccggtcaggtttcctgaggaaggcaggggtgctctatgctcatcagtcattcaagcttctcaggaaatgtgcccatcatgggaacagcagctatcttccaagcttaaaaattatgaatcccaggaagttaaagcccaaccagccaaccaccttcacatccttctcatactagtagagtcattcaaaacagcaagtggtgcttctgaggcagcctcaggaaggtctttgggtggctattctagaggtgaacatactggaaaggtttttacctaaagcattttcagttgaaatgaaaaaagaaggaaagctccaaaagtcagtttcaaattctttcagtgctgctcccagagaagtccgtgtgcaaaggtgtgatgttctggtcataagcggcatactcagaggtgccggtactggccagcttgagctgctgggcagcatgggtcagctggaatgcagcatcagggtgggctgtctcaggcagcagtgtgcattccctttccagcatgtcagccacccctttcagcaggtccaggaaaccaaaggctagagcggcctttcgcaaacggttcagctcct >BX341450:1-829 (+) tccttttccaccttcctggttgckctttccccgtgagcctctcccgcgatcccccccgcccttccgcgtgcccmccccattttgcccccgttctcaggcccgttctgccccttcgtggtggtgtgtttgtcctccgccmgctccmgccmgtctgcgtggctccttccctgcccmgccgcttgacactgcccttacagttgagatgtaaccgagggccgcgcgtgacgctttccgcgccgccagcgcscccctgcsggtccggtttcctgcggccggccggggtgckckgtgctcctccgtccttcccgcttctccggccctgtgcccctcctgggcaccgccgckctcttccccgcttcccmcttctgcctccccggccgttcccgccccccccgcccaccmccttcccctccttctcctcctmgtcgcgtccttccccaccgcacgtggtgcttctgcggccgcctccggaaggtctttgggtggctattctagaggtgmacatactggaaaggtttttacctaaagcattttcagttgaaatgaaaaaagaaggaaagctccaaaagtcagtttcaaattctttcagtgctgctcccagagaagtccgtgtgcaaaggtgtgatgttctggtcataagcggcatactcagaggtgccggtactggccagcttgagctgctgggcagcatgggtcagctggaatgcagcatcagggtgggctgtctcaggcagcagtgtgcmttccctttccagcatgtaagccacccctttmagcaggtcmaggaaaccaaaggctagagcggcctttcgcaamcggttmmgctcct End editing Edited EST: BX447275, type: ac Aligns to: chr16:31193832-31193985 (++) All mismatches: ac (115), ac (119), ac (128), ac (140), ac (143), ac (148), ac (152), ac (158), ac (188), ac (193), ac (199), ac (204), ac (215), ac (239), ac (245), ac (247), ac (248), ac (250), Editing mismatches: 18, all mismatches: 18, alignment length: 154, cluster length: 136, total number of As: 35 Locations in RNA: 115 119 128 140 143 148 152 158 188 193 199 204 215 239 245 247 248 250 Locations in genome: 31193850 31193854 31193863 31193875 31193878 31193883 31193887 31193893 31193923 31193928 31193934 31193939 31193950 31193974 31193980 31193982 31193983 31193985 Upstream nucleotide (in genome): c c c c c c c t c c c c c c c g a c Upstream nucleotide summary: a: 1, c: 15, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): c g g g g g g c g c c g g g g a c n Downstream nucleotide summary: a: 1, c: 5, g: 11, t: 0, other: 1 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 0, ca: 0, cc: 3, cg: 11, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 1 >chr16:31193832-31193985 (+) agctatggggcctaccccacccagcccgggcagggctattcccagcagagcagtcagccctacggacagcagagttacagtggttatagccagtccacggacacttcaggctatggccagagcagctattcttcttatggccagagccagaaca >BX447275:97-250 (+) agctatggggcctacccccccccgcccgggccgggctattccccgccgagccgtccgccctccggacagcagagttacagtggttatagcccgtccccggncccttccggctatggcccgagcagctattcttcttatggcccgagcccgcccc End editing Edited EST: AA936766, type: ca Aligns to: chr17:39775813-39775940 (++) All mismatches: ca (2), ga (11), ca (13), ca (14), ca (26), ca (32), ca (33), ca (46), ca (55), ca (62), ca (75), ca (76), ca (80), ca (81), ca (84), ca (85), ca (91), ca (93), ca (96), ca (97), ca (99), ca (112), ca (116), ca (124), ca (127), Editing mismatches: 24, all mismatches: 25, alignment length: 128, cluster length: 126, total number of Cs: 38 Locations in RNA: 2 13 14 26 32 33 46 55 62 75 76 80 81 84 85 91 93 96 97 99 112 116 124 127 Locations in genome: 39775814 39775825 39775826 39775838 39775844 39775845 39775858 39775867 39775874 39775887 39775888 39775892 39775893 39775896 39775897 39775903 39775905 39775908 39775909 39775911 39775924 39775928 39775936 39775939 Upstream nucleotide (in genome): c g c g t c t c g a c g c t c c t t c a c a t c Upstream nucleotide summary: a: 3, c: 11, g: 4, t: 6, other: 0 Downstream nucleotide (in genome): t c g t c t t t g c t c a c t t t c a a t g a g Downstream nucleotide summary: a: 4, c: 6, g: 4, t: 10, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 0, ca: 2, cc: 0, cg: 2, ct: 7, ga: 0, gc: 2, gg: 1, gt: 1, ta: 1, tc: 3, tg: 0, tt: 2, other: 0 >chr17:39775813-39775940 (+) cctcctgggtggccggccggggtagctgagtcctcagcgggtggtctggtggacctgctcgcgggaggagatgaccttgccatcctggacctcttccacaatggtacgcacctgacgggtggtcaccg >AA936766:1-128 (+) catcctgggtagaaggccggggtagatgagtaatcagcgggtggtatggtggacatgctcgagggaggagatgaaattgaaataatggacatattaaaaaatggtacgcacatgaagggtggtaacag End editing Edited EST: BX333657, type: ca Aligns to: chr22:20127241-20127415 (++) All mismatches: ca (494), ca (499), ca (500), ca (502), ca (503), ca (505), ca (508), ca (509), ca (510), ca (516), ca (522), ta (523), ca (525), ca (532), ca (535), Editing mismatches: 14, all mismatches: 15, alignment length: 174, cluster length: 44, total number of Cs: 17 Locations in RNA: 494 499 500 502 503 505 508 509 510 516 522 525 532 535 Locations in genome: 20127245 20127251 20127252 20127254 20127255 20127257 20127261 20127262 20127263 20127269 20127275 20127278 20127285 20127288 Upstream nucleotide (in genome): a a c a c a c c c t a g g t Upstream nucleotide summary: a: 5, c: 5, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): t c a c a t c c t a t a g g Downstream nucleotide summary: a: 4, c: 4, g: 2, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 3, ca: 2, cc: 2, cg: 0, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr22:20127241-20127415 (+) aggactttgaccaccactgcccctgggtcaacaactgcatcgggcgtcgaaactatcgctacttcttcctgttcctgctgtcactcagtgcacacatggtgggcgtcgtggccttcggcctgg-tctacgtgctgaaccacgctgaggggctgggagccgcgcacaccaccatcac >BX333657:490-663 (+) aggaatttg-aaaaaaatg-aaatrggtaaacaaaagaatcgggagtagaaactatcgctacttcttcctgttcctgctgtcactcagtgcacacatggtgggcgtcgtggccttcggcctgggtctacgtgctgaaccacgctgaggggctgggagccgcgcacaccaccatcac End editing Edited EST: AL532516, type: ca Aligns to: chr3:186334973-186335139 (++) All mismatches: ca (461), ca (467), ca (473), ca (494), ca (498), ca (523), ca (536), ca (539), ca (546), ca (550), ca (559), ca (562), ca (565), ca (574), ca (577), Editing mismatches: 15, all mismatches: 15, alignment length: 166, cluster length: 118, total number of Cs: 44 Locations in RNA: 461 467 473 494 498 523 536 539 546 550 559 562 565 574 577 Locations in genome: 186334977 186334983 186334989 186335010 186335014 186335039 186335052 186335055 186335063 186335067 186335076 186335079 186335082 186335091 186335094 Upstream nucleotide (in genome): a c a a c a a c g c c t a a a Upstream nucleotide summary: a: 8, c: 5, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): t g g t c c g g t c t a g a g Downstream nucleotide summary: a: 2, c: 3, g: 6, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 4, at: 2, ca: 0, cc: 2, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr3:186334973-186335139 (+) cagactcagccgaggacgtgcgcaaggtgtgccaagactgccccctgctggccccgctgaacgacaccagggtggtgcacgccgcgaaagctgccctggccgccttcaacgctcagaacaacggctccaattttcagctggaggaaatttcccgggctcagcttgtg >AL532516:457-622 (+) cagaatcarcagaggaagtgcgcaaggtgtgccaagaatgcaccctgctggccccgctgaacgacaacagggtggtgcaagcagcgaaa-atgcactggccgcattaaaagctcagaaaaaaggctccaattttyagctggaggaaatttcccgggctcagcttgtg End editing Edited EST: BG011375, type: ac Aligns to: chr10:133777427-133777825 (+-) All mismatches: ac (26), ac (29), ac (55), ac (63), ac (80), ac (82), ac (130), ac (140), ac (161), ac (166), ac (194), ac (200), ac (208), ac (216), ac (255), ac (274), ac (278), ac (295), ac (314), ac (357), ac (366), ac (377), Editing mismatches: 22, all mismatches: 22, alignment length: 399, cluster length: 352, total number of As: 77 Locations in RNA: 26 29 55 63 80 82 130 140 161 166 194 200 208 216 255 274 278 295 314 357 366 377 Locations in genome: 133777800 133777797 133777770 133777762 133777745 133777743 133777695 133777685 133777664 133777659 133777631 133777625 133777617 133777609 133777570 133777551 133777547 133777530 133777511 133777469 133777460 133777449 Upstream nucleotide (in genome): c c c c c c c c c c c c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 22, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): g g c a a c c g g a c a t a a t g c g c a g Downstream nucleotide summary: a: 7, c: 6, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 7, cc: 6, cg: 7, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr10:133777427-133777825 (+) cgagtgtcggtttttcctgtccagggccctcccaaagcgcccacgttgtatttcgttgtctccctgcctt-ccagtctctgctgcagtctttcaggacccgagcacttgggaagtgtgggcaggcattttgtagactccccctcaattttggtttgcctgatattttctcgtgattaaactgcaattatgcattctggcaagaacacggaagagatctggcctcctctgcatcaaatcaggatgtaggtggtgtctaccaggtctcttcactgtagagttactgttttctttggtgtaatgagtatcttgcggggacacaatgagaatatcctctcaagaacccactaactttagtttccgtcgacgaatcagcagttattggtatttgcctaatggtga >BG011375:1-399 (-) cgagtgtcggtttttcctgtcccgggccctccccaagcgcccccgttgtatttcgttgtctccctgccttcccagtctctgctgccgtctttcaggacccgagcccttgggaagtgtgggccggccttttgtagactccccctccattttggtttgcctgatattttctcgtgattaaactgccattatgccttctggccagaacccggaagagatctggcctcctctgcatccaatccggatgtaggtggtgtctacccggtctcttccctgtagagttactgttttctttggtgtaatgagtatcttgcggggaccccatgagaatatcctctccagaaccccctaactttagtttccgtcgacga-tccgccgttattggtatttgcctaatggtga End editing Edited EST: AI003864, type: ca Aligns to: chr11:45604743-45605016 (+-) All mismatches: ca (102), ca (118), ca (146), ca (147), ca (159), ca (170), ca (171), ca (178), ca (183), ca (194), ca (195), ca (209), ca (218), ca (219), ga (222), Editing mismatches: 14, all mismatches: 15, alignment length: 274, cluster length: 118, total number of Cs: 43 Locations in RNA: 102 118 146 147 159 170 171 178 183 194 195 209 218 219 Locations in genome: 45604916 45604900 45604872 45604871 45604859 45604848 45604847 45604840 45604835 45604824 45604823 45604809 45604800 45604799 Upstream nucleotide (in genome): c a c a c c c g c c t c c a Upstream nucleotide summary: a: 3, c: 9, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): a a a c c c c t c a c a g c Downstream nucleotide summary: a: 5, c: 7, g: 1, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 0, ca: 4, cc: 4, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr11:45604743-45605016 (+) tgtcaagatgcttttccttggaatccagctgccatgttgtgagaaagcccagggcaccgcagagaccacatgtgggtgttccagccaacagccccagctaggtccccatggagagcccacaccaaccaccagatatgagggttcagactccagcccacagtcttcaagtcttccagctgcagtcccagacatcatgaaaccattctgctgtgacctgtcagaatttctgaccccagaaactgttggagataataaataattactgttgttttaa >AI003864:2-275 (-) tgtcaagatgcttttccttggaatccagctgccatgttgtgagaaagcccaggacaaagcagagacaacatgtgggtgttaaagccaacagcaccagataggtcaacatggagagcacacaccaaccaaaagatatgagggttcagactccagcccaaagtcttcaagtcttcaagctgcagtcccagacatcatgaaaccattctgctgtgacctgtcagaatttctgaccccagaaactgttggagataataaataattactgttgttttaa End editing Edited EST: AA489385, type: ca Aligns to: chr12:52642375-52642543 (+-) All mismatches: ca (3), ca (6), ta (21), ca (34), ca (39), ca (42), ca (43), ca (49), ca (59), ca (64), ca (75), ca (79), ca (96), ca (107), ca (115), ca (117), ca (118), ca (119), ca (130), ca (136), ca (142), ca (155), ca (157), ca (158), ca (170), Editing mismatches: 24, all mismatches: 25, alignment length: 170, cluster length: 167, total number of Cs: 50 Locations in RNA: 3 6 34 39 42 43 49 59 64 75 79 96 107 115 117 118 119 130 136 142 155 157 158 170 Locations in genome: 52642541 52642538 52642510 52642505 52642502 52642501 52642495 52642485 52642480 52642469 52642465 52642448 52642438 52642430 52642428 52642427 52642426 52642415 52642409 52642403 52642390 52642388 52642387 52642375 Upstream nucleotide (in genome): a g a t c t g g c g t g a t c c a g g g a c t n Upstream nucleotide summary: a: 5, c: 5, g: 8, t: 5, other: 1 Downstream nucleotide (in genome): t g c c a c t t t a c a c g t c c a g a t a c t Downstream nucleotide summary: a: 6, c: 8, g: 3, t: 7, other: 0 Dinucleotide summary: aa: 0, ac: 3, ag: 0, at: 2, ca: 2, cc: 1, cg: 0, ct: 2, ga: 4, gc: 0, gg: 2, gt: 2, ta: 0, tc: 4, tg: 1, tt: 0, other: 1 >chr12:52642375-52642543 (+) ctgtgatgaattccactggtggcagtagcagtggcggtggcattgggctgaccctcgggggaacca-tgggcagcaatgccctgagcttctccagcagtgcgggtcctgggctcctgaaggcttattccatccggaccgcatccgccagtcgcaggagtgcccgcgactg >AA489385:1-170 (-) atgtgatgaattaaaatggtggcagtagaagtggaggtggaattgggctgaaaatagggggaaacaatgggcagaaatgccctgagcttctacagaagtgcgggtcatgggatcctgaaggattattaaatacggaacgcatccgccagacgcaggagtgcccgagaatg End editing Edited EST: BF827201, type: ac Aligns to: chr15:67416572-67416834 (+-) All mismatches: ac (66), ac (85), ac (96), ac (114), ac (116), ac (131), ac (133), ac (140), ac (156), ac (196), tc (209), ac (223), ac (227), ac (229), ac (232), ac (243), ac (267), Editing mismatches: 16, all mismatches: 17, alignment length: 261, cluster length: 202, total number of As: 51 Locations in RNA: 66 85 96 114 116 131 133 140 156 196 223 227 229 232 243 267 Locations in genome: 67416780 67416761 67416750 67416732 67416730 67416715 67416713 67416706 67416690 67416650 67416623 67416619 67416617 67416614 67416603 67416579 Upstream nucleotide (in genome): c c c c c c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 16, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): g a a g c g c g g t g c c c g g Downstream nucleotide summary: a: 2, c: 5, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 2, cc: 5, cg: 8, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr15:67416572-67416834 (+) ccgcctcagcttcctgaagtggtaagattacaggcatatgccaccacacccagcttttttgttcctttgaaagaaggcattgctaatgattgccctgaggtgtctagatgacccggccagccatccacctctgcagtttacacagcttgttgatctccacagtgagaattaacttcacaacctgggtccaagaggctggaggattgtcagtctttagaaaaaaaaaaatctattatctttagagaagatggacttgttgagga >BF827201:14-274 (-) ccgcctccgcttcctgaagtggtaagattaccggcatatgccccccccccccgcttttttgttcccttgaaagaaggccttgctaatgattgccctgaggtgtctagatgacccggcccgccatccacctctgccgtttaccccgcttgttgatctcccccgtgagaattaacttcaccacctgggtcccagaggctggaggattgtccgtctttagaaaaaaaaaa-tctattatctttagagaagatg-acttgttgagga End editing Edited EST: BF827244, type: ac Aligns to: chr16:53195774-53196140 (+-) All mismatches: ca (10), ca (24), ac (25), ac (29), ac (86), ac (89), ac (99), ac (121), ac (130), ac (162), ac (185), ac (199), ac (226), ac (234), ac (239), ac (248), ac (273), ac (282), ac (322), ac (329), ac (332), ac (343), ac (356), ac (360), ac (368), Editing mismatches: 23, all mismatches: 25, alignment length: 366, cluster length: 344, total number of As: 89 Locations in RNA: 25 29 86 89 99 121 130 162 185 199 226 234 239 248 273 282 322 329 332 343 356 360 368 Locations in genome: 53196124 53196119 53196062 53196059 53196049 53196027 53196018 53195986 53195963 53195949 53195922 53195914 53195909 53195900 53195875 53195866 53195827 53195820 53195817 53195806 53195793 53195789 53195781 Upstream nucleotide (in genome): c c c c c c c c c c c c c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 23, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): c g g a a g a a g c a g c a g t c t c g g a g Downstream nucleotide summary: a: 7, c: 5, g: 9, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 7, cc: 5, cg: 9, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr16:53195774-53196140 (+) ccgcctcagcttcccaagcagcttggcaccacaggcatgcaccaccatgccccactaatttttgta-tttttttgtagagatggggttttgccatgttggccagcctggtctcgaactcctgagctcaagtgatccacctcagcctcccaaaatgctgggattacaggtgtgagccactgtgcctgacccagccttgcttttttaaatttcccaactatagtggggtgattgtagatatcacttcaaatatctcagcgtacgctaaactatgtgtcaattgttaacaacagtgaatattgctgatttgactctagaattttactgcttagaaaagagagaggagccaggacacagtgggaagagaggc >BF827244:10-375 (-) ccgcctccgcttccccagccgcttggcaccaccggcatgcacccccctgcccccctaatttttgtattttttttgtagagatggggttttgccctgttggnccgcctggtctcgaactcctgagctccagtgatccccctccgcctccccaaatgctgggattacaggtgtgagcccctgtgcctgaccccgccttgcttttttaaatttccccactatagtggggtgattgtagatatcacttccaatatctccgcgtacgctaaactatgtgtccattgttaaccaccgtgaatattgctgatttgactctagaattttactgcttagaaaagagagaggagcccg-acca-gtgggaagagagga End editing Edited EST: BG991950, type: ac Aligns to: chr17:2577353-2577582 (+-) All mismatches: ac (126), ac (129), ac (222), ac (225), ac (250), ca (252), ac (257), ac (266), ac (286), ac (291), ac (317), ac (324), ac (326), Editing mismatches: 12, all mismatches: 13, alignment length: 230, cluster length: 201, total number of As: 59 Locations in RNA: 126 129 222 225 250 257 266 286 291 317 324 326 Locations in genome: 2577573 2577570 2577477 2577474 2577449 2577442 2577433 2577413 2577408 2577382 2577375 2577373 Upstream nucleotide (in genome): c c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 12, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): g a a a g a g a a g g c Downstream nucleotide summary: a: 6, c: 1, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 6, cc: 1, cg: 5, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr17:2577353-2577582 (+) gctactgtgtgaagacattcacaggacacagagaatgggtacgtatggtacggccaaatcaagatggcactctgatagccagctgttccaatgaccagactgtgcgtgtatgggtcgtagcaacaaaggaatgcaaggctgagctccgagagcatgagcatgtggtagaatgcatttcctgggctccagaaagctcatattcctccatctctgaagcaacaggatctgag >BG991950:117-346 (-) gctactgtgtgaagacattccccggacaccgagaatgggtacgtatggtacggcccaatccagatggcactctgatagcccgctgttcccatgaaccgactgtgcgtgtatgggtcgtagccaccaaggaatgcaaggctgagctccgagagcatgagcatgtggtagaatgcatttcctgggctccagaaagctcatattcctccatctctgaagccaccggatctgag End editing Edited EST: BF827996, type: ac Aligns to: chr17:27767704-27768114 (+-) All mismatches: ac (44), at (47), ac (73), tc (77), ac (91), ac (125), ac (148), ac (196), ac (204), ac (240), ac (248), ac (259), ac (273), ac (288), ac (301), ac (326), ac (335), ac (378), ac (390), ac (394), ac (418), Editing mismatches: 19, all mismatches: 21, alignment length: 411, cluster length: 375, total number of As: 87 Locations in RNA: 44 73 91 125 148 196 204 240 248 259 273 288 301 326 335 378 390 394 418 Locations in genome: 27768085 27768056 27768038 27768004 27767981 27767933 27767925 27767889 27767881 27767870 27767856 27767841 27767828 27767803 27767794 27767751 27767739 27767735 27767711 Upstream nucleotide (in genome): c c c c c c c c c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 19, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): t c t t t a t g c g g c g g t c t g g Downstream nucleotide summary: a: 1, c: 4, g: 7, t: 7, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 1, cc: 4, cg: 7, ct: 7, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr17:27767704-27768114 (+) ctgcctcagcctcctgagtagctgggattacaggcatgtgccacctcaccctgctaatttttgaatttttagtagagatgaggtttcaccatgttggtcaggctggtcttgaactcctgacctcaggtgatctggccaccttggcctcctacagtgctgggattacaggcatgagccaccggcccagcctgttgagtgtttttattatgaaagtgtgttgcattttatcaaatgcgttttccatatttattgagatgattgtgggttttttcccttcattttgataaagtgatatattacattgatttcttttcatatgttgaatcacccttgcattcctagaataagtgccacttaatcataatgtataatccttttaacatgctgctggattcaggtattttcgttgag >BF827996:15-425 (-) ctgcctccgcctcctgagtagctgggattaccggcctgtgccacctccccctgctaatttttgaatttttagtagagatgaggtttcaccctgttggtccggctggtcttgaactcctgacctccggtgatctggcccccttggcctcctaccgtgctgggattaccggcatgagcccccggccccgcctgttgagtgtttttattatgaaagtgtgttgccttttatccaatgcgttttccatatttattgagatgattgtgggttttttcccttccttttgataaagtgatatattaccttgatttcttttcatatgttgaatcacccttgccttcctagaataagcgccccttaatcataatgtataatcctttttacctgctgctggattcaggtattttcgttgag End editing Edited EST: DB533672, type: ca Aligns to: chr19:54610330-54610481 (+-) All mismatches: ca (253), ca (266), ca (268), ca (278), ca (279), ca (284), ca (293), ca (302), ca (313), ca (338), ca (356), ca (372), ca (395), Editing mismatches: 13, all mismatches: 13, alignment length: 153, cluster length: 142, total number of Cs: 39 Locations in RNA: 253 266 268 278 279 284 293 302 313 338 356 372 395 Locations in genome: 54610480 54610467 54610465 54610455 54610454 54610449 54610440 54610432 54610421 54610396 54610378 54610362 54610339 Upstream nucleotide (in genome): g t c c g t t c c g c t t Upstream nucleotide summary: a: 0, c: 5, g: 3, t: 5, other: 0 Downstream nucleotide (in genome): a a t a c a a a a a a a a Downstream nucleotide summary: a: 11, c: 1, g: 0, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 4, cc: 0, cg: 0, ct: 1, ga: 2, gc: 1, gg: 0, gt: 0, ta: 5, tc: 0, tg: 0, tt: 0, other: 0 >chr19:54610330-54610481 (+) gtgtggggtcagtttattgggcatgcgtcagtcagaggctgggctggccagggtcgggtagggcagcagtttgtctggaccccgagaaacccaactggaatccagggcc-tcatctgcttcaaagccaaagtcttcctcaaccttaatctgca >DB533672:252-404 (-) gtgtggggtaagtttattgggcatgcgtcagtaagaggctgggctggcaagggtcgggtagggcagaagtttgtctggaccccgagaaaccaaactggaatcaagggccctaatctgcttaaaagaaaaagtcttcataaaccttaatctgaa End editing Edited EST: BG988972, type: ac Aligns to: chr1:26598536-26598772 (+-) All mismatches: ac (2), ac (12), ac (26), ac (50), ac (79), ac (83), ac (99), ac (122), ac (126), tc (138), ac (148), ac (190), ac (205), ac (213), ac (219), ac (238), Editing mismatches: 15, all mismatches: 16, alignment length: 238, cluster length: 236, total number of As: 68 Locations in RNA: 2 12 26 50 79 83 99 122 126 148 190 205 213 219 238 Locations in genome: 26598771 26598762 26598748 26598724 26598695 26598691 26598675 26598652 26598648 26598626 26598584 26598569 26598561 26598555 26598536 Upstream nucleotide (in genome): c c c c c c c c c c c c c c n Upstream nucleotide summary: a: 0, c: 14, g: 0, t: 0, other: 1 Downstream nucleotide (in genome): g g g a g g a g t a t g g a t Downstream nucleotide summary: a: 4, c: 0, g: 8, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 4, cc: 0, cg: 8, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr1:26598536-26598772 (+) atggatcagttgcgctcacaagtacaggtgagcaggaatccttgggacatggtgggcagaacttaatgatggaatctctagaatttagccaatatttattttgttctctgccatgcaggttgctcagtgttagggatacaaaaagaatgagacccagtcagtgcttttgagccttgctgagaggacacaaatatagtagggagtttcagcacagtactgtgagagcagtcccca-cag >BG988972:1-238 (-) ctggatcagttgcgctcaccagtaccggtgagccggaatccttgggacctggtgggcagaacttaatgatggaatctctagaatttagcccatatttattctgttctctgccctgccggttgctcagtgttagggataccaaaagaatgagaccccgtccgtgcttttgagccttgctgagaggacaccaatatagtagggagtttcagcaccgtactgtgagagccgtccccanccg End editing Edited EST: BF827203, type: ac Aligns to: chr1:39866273-39866615 (+-) All mismatches: ac (5), ac (7), ac (51), ac (54), ac (57), ac (78), ac (85), ac (115), ac (142), ac (150), ac (157), ac (177), ac (185), ac (190), ac (203), ac (228), gc (235), ac (237), ac (276), ac (280), ac (285), ac (296), ac (312), ac (321), ct (336), ac (339), Editing mismatches: 24, all mismatches: 26, alignment length: 340, cluster length: 338, total number of As: 94 Locations in RNA: 5 7 51 54 57 78 85 115 142 150 157 177 185 190 203 228 237 276 280 285 296 312 321 339 Locations in genome: 39866615 39866613 39866567 39866564 39866561 39866540 39866533 39866503 39866475 39866467 39866460 39866440 39866432 39866427 39866414 39866389 39866380 39866341 39866337 39866332 39866321 39866305 39866296 39866278 Upstream nucleotide (in genome): a t c c c c c c c c c c c c c c c c c c c c c c Upstream nucleotide summary: a: 1, c: 22, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): n a g c g g t g a t t a g c a g c g c c g a g a Downstream nucleotide summary: a: 6, c: 5, g: 9, t: 3, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 5, cc: 5, cg: 9, ct: 3, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 1 >chr1:39866273-39866615 (+) ggctcaagcgatcctcctgcctcagcccctacaagtagctgggattacaggcatgcaccaccacacccagctaatttttgtatcttttgtagagatggggttttaccacgttgcccaggctagtcttgaactcctgagctcaagtgatccgcccacctcagcctcccaaaatgctggggttataaacatgagccattgtatcaagcctgtgaaatctttttaataagaacagttacccctctttgtgcctagggatcatcattctccagaagacttgatctaaggcccagcaccagattattttcttcttgaaaattggaaaaatggaaattatgaggataaa >BF827203:5-344 (-) ggctccagtgatcctcctgcctccgcccctaccagtagctgggattaccggcatgcacccccaccccccgctaatttttgtatcttttgtagagatggggttttacccccttgccccggctagtcttgaactcctgagctccagtgatccgcccccctccgcctccccaaatgctggggttataaacctgagcccttgtatccagcctgtg-aatctttttaataagaaccgttacccctctttgtgcctagggatcatccttctcccgaagacttgatctaaggccccgcccccgattattttcttcttgaaaattggaaaa--ggaaattatgaggatcac End editing Edited EST: AI000183, type: ca Aligns to: chr1:22987694-22988023 (+-) All mismatches: ca (10), ca (12), ca (47), ca (55), ca (57), ca (65), ag (66), ca (82), ca (89), ag (90), ca (92), ag (101), ca (130), ca (161), ca (178), ca (193), ca (217), ca (229), ca (232), ca (241), ca (244), ca (247), ca (268), ca (270), ca (271), ca (277), ca (283), ca (284), ca (286), ca (289), ca (294), ca (295), ca (299), ca (304), ca (313), ca (323), ca (325), Editing mismatches: 34, all mismatches: 37, alignment length: 333, cluster length: 313, total number of Cs: 105 Locations in RNA: 10 12 47 55 57 65 82 89 92 130 161 178 193 217 229 232 241 244 247 268 270 271 277 283 284 286 289 294 295 299 304 313 323 325 Locations in genome: 22988014 22988012 22987977 22987969 22987967 22987959 22987942 22987935 22987932 22987894 22987863 22987846 22987831 22987809 22987798 22987795 22987786 22987783 22987780 22987759 22987757 22987756 22987750 22987744 22987743 22987741 22987738 22987733 22987732 22987728 22987723 22987714 22987704 22987702 Upstream nucleotide (in genome): t a g a a a a a t t c c c t c c t t a t c t g c a c t c t a a a a t Upstream nucleotide summary: a: 12, c: 9, g: 2, t: 11, other: 0 Downstream nucleotide (in genome): t t t a a c a c t a a g a a g a c t g a t c a g c a a a c c a t c a Downstream nucleotide summary: a: 15, c: 8, g: 4, t: 7, other: 0 Dinucleotide summary: aa: 4, ac: 5, ag: 1, at: 2, ca: 5, cc: 0, cg: 3, ct: 1, ga: 1, gc: 0, gg: 0, gt: 1, ta: 5, tc: 3, tg: 0, tt: 3, other: 0 >chr1:22987694-22988023 (+) aaggtggtcaccttctgtgactatgcctacaacaccttccaggtcaccaccggtggcatggtcctcaagctggagcagggggagaacgtcttcctgcaggccaccgacaa-gaactcactactgggcatgga-ggg-tgccaacagcatcttttccgggttcctgctctttccagatatggaggcctgacctgtgggctgcttcacatccaccccggctccccctgccagcaacgctcactctacccccaacaccaccccttgcccaaccaatgcacacagtagggcttggtgaatgctgctgagtgaatgagtaaataaactcttcaaggcc >AI000183:1-333 (-) aaggtggtaaacttctgtgaatatgcctaaaacaacttaaaggtaacaaaaggtggaatggtaataaagctggagcagggggagaaagtattactgcaggcaacagacaaagaactaactactgggcatggaaggggtgcaaacagcatcttttcagggttcctgctctttcaagatatggaggcctgacctgtgggctgcttaacatccaccccggctccccctgccagcagcgctcactatgaccccaaaaccaccccttgcccagacaatgcaaaaagtagggattggtgaatgctgctgagtgaatgagtaaataaaatattcaaggcc End editing Edited EST: AA999928, type: ca Aligns to: chr22:23243221-23243473 (+-) All mismatches: ca (3), ca (12), ca (15), ca (17), ca (18), ca (24), ca (38), at (48), ca (51), ca (53), ca (58), ca (74), ca (76), ca (77), ca (78), ca (88), ca (96), ca (113), ag (115), ca (117), ca (128), ca (131), ca (134), ca (139), ca (143), ca (152), ca (153), ca (156), at (164), ca (173), ca (178), ca (182), ga (190), ca (198), ca (203), ca (209), ca (215), ca (216), ca (217), ca (232), ca (234), ca (246), Editing mismatches: 38, all mismatches: 42, alignment length: 251, cluster length: 246, total number of Cs: 72 Locations in RNA: 3 12 15 17 18 24 38 51 53 58 74 76 77 78 88 96 113 117 128 131 134 139 143 152 153 156 173 178 182 198 203 209 215 216 217 232 234 246 Locations in genome: 23243471 23243462 23243459 23243457 23243456 23243450 23243436 23243423 23243421 23243416 23243400 23243398 23243397 23243396 23243386 23243378 23243361 23243357 23243346 23243343 23243340 23243335 23243331 23243322 23243321 23243318 23243301 23243296 23243292 23243276 23243270 23243264 23243258 23243257 23243256 23243241 23243239 23243226 Upstream nucleotide (in genome): t a c c g a g a t c a c c t g a g g a a g a c c a a t c g g a g c c a t t c Upstream nucleotide summary: a: 12, c: 11, g: 9, t: 6, other: 0 Downstream nucleotide (in genome): a a t c c a a g a a a a c c a g a c a a a a a a c c a c a c a c g c c a t a Downstream nucleotide summary: a: 21, c: 12, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 7, ac: 3, ag: 2, at: 0, ca: 5, cc: 4, cg: 1, ct: 1, ga: 5, gc: 4, gg: 0, gt: 0, ta: 4, tc: 1, tg: 0, tt: 1, other: 0 >chr22:23243221-23243473 (+) aaggccacactggtgtgtctcataagtgacttctacccgggagccgtgacagtggcctggaaggcagatagcagccccgtcaaggcgggagtggagaccaccacaccctccaaacaaagcaacaacaagtacgcggccagcagctatctgagcctgacgcctgagcagtggaagtcccacagaagctacagctgccaggtcacgcatgaagggagcaccgtggagaagacagtggcccctacagaatgttcat >AA999928:1-251 (-) aaggcaacact-gtgtgtataataagtgacttctaaaagggagacgtgaaagt-gactggaagacagatagaagcaccgtaaaggcgggtgtggagaacaaaacaccctcaaaaaaaagaaaaaaaaagtacgcggacggaagctatctgagcctgaagcctgagaagtggaagtaaaaaagaagctacagctgcaaggtaaagcttgaagggagaaccgtggagaagaaagtggaacataaagaatgttaat End editing Edited EST: BF826821, type: ac Aligns to: chr2:7318890-7319160 (+-) All mismatches: ca (8), ac (39), ac (49), ac (87), ac (92), ac (127), ac (138), ac (148), ac (158), ac (175), ac (184), ac (198), ac (202), ac (206), ac (213), ac (238), Editing mismatches: 15, all mismatches: 16, alignment length: 271, cluster length: 199, total number of As: 59 Locations in RNA: 39 49 87 92 127 138 148 158 175 184 198 202 206 213 238 Locations in genome: 7319128 7319118 7319080 7319076 7319041 7319030 7319020 7319010 7318993 7318984 7318970 7318966 7318962 7318955 7318930 Upstream nucleotide (in genome): c c c c c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 15, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a c a g g t a a g t a a a a a Downstream nucleotide summary: a: 9, c: 1, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 9, cc: 1, cg: 3, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr2:7318890-7319160 (+) tgaacctgttcctcatggatccccctttatacacctctccaaatcgaggtcttgaacagaagtccaatagccaatcaatcaaaaaaagatgcccattctcaccagtaatcggggaaatgcaagttaagacaaaggatcgcattggtgagtcagtgggtagtaattaagagcctggaccctgtggcca-gacaatgtggatttgcatctcggcttggtggtgtgtttggcactgtgcctcaatttcctcctctgtaaagtgcgggtagtagtc >BF826821:8-278 (-) tgaacctgttcctcatggatccccctttatacacctctcccaatcgaggtcttgaacagaagtcccatagcccatccatccaaaaaagatgccccttctcacccgtaatcggggaaatgccagttaagaccaaggatcgccttggtgagtccgtgggtagtaattaagagcctggaccctgtggcccagaccatgtggatttgcatctcggcttggtggtgtgtttggccctgtgcctccatttcctcctctgtaaag-gcgggtagtagta End editing Edited EST: BF960477, type: ac Aligns to: chr2:153214451-153214725 (+-) All mismatches: ac (19), ac (30), ac (65), ac (72), ac (75), ac (95), ac (119), ac (149), ac (173), ac (196), ac (207), ac (227), ac (252), ac (278), Editing mismatches: 14, all mismatches: 14, alignment length: 275, cluster length: 260, total number of As: 67 Locations in RNA: 19 30 65 72 75 95 119 149 173 196 207 227 252 278 Locations in genome: 153214724 153214713 153214678 153214671 153214668 153214648 153214624 153214594 153214570 153214547 153214536 153214516 153214491 153214465 Upstream nucleotide (in genome): c c c c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 14, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): g g a g t a g c g g a a a a Downstream nucleotide summary: a: 6, c: 1, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 6, cc: 1, cg: 6, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr2:153214451-153214725 (+) gtgagggtgctgccaaaggagattaacatttgagtcagtcaactgggagaggcagatccaccctcaatctgggtgggcaccatccaatcagctgccagtgtggctagaataaagcagacagaagaagatggaagagctgattcactgagtctgctgagtctgccgagtctgccagccttcatctttctcttgtgcccaatgcttcctgccctcgaacatcagactccaagttcttcagcttttggactcttagatttacaccagtgatttgccag >BF960477:18-292 (-) gtgagggtgctgcccaaggagattaacatttgagtcagtccactgggagaggcagatccaccctccatctgggtgggcaccatcccatcagctgcccgtgtggctagaataaagcagaccgaagaagatggaagagctgattccctgagtctgctgagtctgccgagtctgcccgccttcatctttctcttgtgccccatgcttcctgccctcgaacctccgactcccagttcttcagcttttggactcttagatttacacccgtgatttgcccg End editing Edited EST: BF751181, type: ac Aligns to: chr2:46247285-46247607 (+-) All mismatches: ac (91), ac (96), ac (107), ac (148), ac (153), ac (161), ac (178), ac (196), ac (205), ac (208), ac (212), ac (239), ac (245), ac (247), ac (274), ac (301), ac (308), ac (323), Editing mismatches: 18, all mismatches: 18, alignment length: 324, cluster length: 233, total number of As: 62 Locations in RNA: 91 96 107 148 153 161 178 196 205 208 212 239 245 247 274 301 308 323 Locations in genome: 46247521 46247516 46247505 46247464 46247459 46247451 46247434 46247416 46247407 46247404 46247400 46247373 46247367 46247365 46247338 46247311 46247304 46247289 Upstream nucleotide (in genome): c c c c c c c c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 18, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): g c g a t t t c c c c g g c g t a a Downstream nucleotide summary: a: 3, c: 6, g: 5, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 3, cc: 6, cg: 5, ct: 4, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr2:46247285-46247607 (+) ggccaagctgttggttttcaaattacattttgtggaggtgcctctgttgcttcagtgtatggtgggtgggagctgggtacacagacccagtatgcgctattagaggaggatgtacacgcaccacctactccacctggctgtgcagctccatgtccgactgtttcacatgttagcattccaaggaagataacatttgaagaaaggatttcactttgaaaacagtttaaaaccactacagctctgactgggagctggagtgagtcttgattttttttttt-aacctacccatattataatctaatgtatacaggtgtcatttcctg >BF751181:4-327 (-) ggcccagctgttggttttccaattaccttttgtggaggtgcctctgttgcttccgtgtatggtgggtgggagctgggtaccccgaccccgtatgcgctattagaggaggatgtacccgccccccctactccccctggctgtgcagctccctgtccgactgtttcacctgttagccttcccaggaagataacatttgaagaaaggatttcactttgaaaaccgtttaaaacccctaccgctctgactgggagctggagtgagtcttgattttttttttttaacctacccatattataatctaatgtatacaggtgtcatttcctg End editing Edited EST: AL521316, type: ac Aligns to: chr7:76221044-76221956 (+-) All mismatches: ac (356), ac (395), ac (397), ac (404), ac (414), ac (418), ac (425), ac (431), ac (432), ac (450), ac (454), ac (459), ac (476), ac (491), ac (508), ac (511), ac (521), ac (528), ac (532), ac (537), ac (543), ac (550), ag (559), ac (561), ac (563), ac (566), ac (570), ac (577), ac (579), ac (581), ac (583), ac (585), ac (588), ac (592), ac (595), ag (598), ac (601), ac (603), ac (616), ac (619), ca (847), ac (848), ca (849), Editing mismatches: 39, all mismatches: 43, alignment length: 914, cluster length: 493, total number of As: 153 Locations in RNA: 356 395 397 404 414 418 425 431 432 450 454 459 476 491 508 511 521 528 532 537 543 550 561 563 566 570 577 579 581 583 585 588 592 595 601 603 616 619 848 Locations in genome: 76221607 76221568 76221566 76221559 76221549 76221545 76221538 76221532 76221531 76221513 76221509 76221504 76221487 76221472 76221455 76221452 76221442 76221435 76221431 76221426 76221420 76221413 76221402 76221400 76221397 76221393 76221386 76221384 76221382 76221380 76221378 76221375 76221371 76221368 76221362 76221360 76221347 76221344 76221115 Upstream nucleotide (in genome): c c c g t c t a c c t t c t c c c t t g g c c t a g c t g c c g g t g c g g c Upstream nucleotide summary: a: 2, c: 17, g: 10, t: 10, other: 0 Downstream nucleotide (in genome): a a c c c g g a a c c a c g c g t c c g g t g c g g a c t g c g g a t g g g c Downstream nucleotide summary: a: 7, c: 13, g: 15, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 4, cc: 6, cg: 5, ct: 2, ga: 0, gc: 1, gg: 7, gt: 2, ta: 2, tc: 6, tg: 2, tt: 0, other: 0 >chr7:76221044-76221956 (+) ggccagtctgtctccccaggtcccctggtccccgctgcttgtcattgggcagggactcctggcttgaat-ccacaacacagctgccccacccagggctgattgtaccaactggtagtggctctgcatatctctgcagtggagccccaagaaacaagtgaaagtcctgctgccacaaccattgccaaggtcccatctcttgcttcctccaagctggggagggaacataaagcctgagcttaccccagggctgcagtgtggatcctgggcatgccaagctaagatctacagccagcattctggaggagctgacactttcagatcactaagagggagcacagatacaattgggaggaagtacagaggttccacatggctgagcaagagcctacctactggccattatgcttcagcaccatctactgagtcatagcccaaacttcatcaccaaaaacattttgctaatatacccacctgtgaaaccaaggacaaaaattagaattcagctacaaataaagaccctgcacaaaggtcttggccttctgaaaacatccagaaaagaagtcaactgacgatattcaaattataccacagttaaaggaatatcagcctacacaaatgagaaaggacctgacccgtagaagaactctggcaattcaaaaagccagagtttctcctttcctccaattgattgtgctggttccatagcaaaggttcttaaccagactgaaagtactgaaatgacagacatagaattcagatatggatagaaatgaaaagcatcaagattcaggagaaagtcaaaattttattctaatccaaggaatctaaggattgcagcaaaacaatacaggagctgaaagatgaaatggccattataaggaagaaccaaatggatctgatagaactgaaaaaa >AL521316:7-920 (-) ggccagtctgtctccccaggtcccctggtccccgctgcttgtcattgggcagggactcctggcttgaatccacaaacacagctgccccacccagggctgattgtaccaactggtagtggctctgcatatctctgcagtggagccccaagaaacaagtgaaagtcctgctgccacaaccattgccaaggtcccatctcttgcttcctccaagctggggagggaacataaagcctgagcttaccccagggctgcagtgtggatcctgggcatgccaagctaagatctacagccagcattctggcggcgctgacactttccgctcgctcagcgggcgccccgctcccattgggcggacgtcccggggttccacctggctgcgcaagcgcctccctcctggcccttatgcttccgccccntctnctgagtcntcgcccaaacttcntccccaaaaacbttttgctcatatccccccctgtgaaaccaaggacccaaattcgaattccgctccaaataaagcccctgccccaaggtcttggccttctgaamacatccmgaaaagaagtccactgacgatattcmaattataccacagttaaaggaatatcmgcctacacaaatgagaaaggacctgacccgtagaagaactctggcaattcmaaaagccagagtttctcctttcctccaattgattgtgctggttccatagcaaaggttcttaaccagactgaaagtactgaaatgacagacatagaattcagatatggatagaaatgaaaagcatcaagattcaggagaaagtyaaaattttattctaatccaaggaatctaaggattgcagcaaaacaatacaggagctgaaagatgaaatggccattataaggaagaaccaaatggatctgatagdactgaaaaaa End editing Edited EST: BF913603, type: ac Aligns to: chr8:90924986-90925297 (+-) All mismatches: ac (15), ac (30), ac (38), ac (43), ac (59), ac (70), ac (74), ac (87), ac (135), ac (155), ac (164), ac (181), ac (195), ac (237), ac (255), ac (297), ac (299), ac (311), Editing mismatches: 18, all mismatches: 18, alignment length: 312, cluster length: 297, total number of As: 83 Locations in RNA: 15 30 38 43 59 70 74 87 135 155 164 181 195 237 255 297 299 311 Locations in genome: 90925283 90925268 90925260 90925255 90925239 90925228 90925224 90925211 90925163 90925143 90925134 90925117 90925103 90925061 90925043 90925001 90924999 90924987 Upstream nucleotide (in genome): c c c c c c c c c c c c c c c a c c Upstream nucleotide summary: a: 1, c: 17, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): g a a t a t g a g a c a t g a a a a Downstream nucleotide summary: a: 10, c: 1, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 9, cc: 1, cg: 4, ct: 3, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr8:90924986-90925297 (+) caacgaaaaaaacaaaactcctgatccctcctgatggcttggaggttagggtttttcaaggatagttgggtgaacaggggactagggaataggtgctgctgattggttggggatgccatgctgggggtatcaaaaatggttctctagcactgagtccaactctgggtggggggccgcaggactggttcagttgagtcttgggtctgagtcttgaatcttgggaccaatagagtcagacagtcatcagaaatgcaaaagtctgaaaagacatttcaaaaggccaacctcaggatccacagtagcgatgttatc >BF913603:1-312 (-) ccacgaaaaaaaccacactcctgatccctcctgatggcttggaggttagggtttttccaggatagttgggtgaaccggggactagggaataggtgctgctgattggttggggatgccctgctgggggtatccaaaatggttctctagccctgagtcccactctgggtggggggccgccggactggttcagttgagtcttgggtctgagtcttgaatcttgggacccatagagtcagaccgtcctcagaaatgccaaagtctgaaaagacctttccaaaggcccacctcaggatccaccgtagcgatgttatc End editing Edited EST: GD149544, type: ac Aligns to: chr10:56707345-56707488 (-+) All mismatches: ac (180), ac (186), ac (190), ac (192), ac (194), ac (196), ac (204), ac (206), ac (208), ac (210), ac (212), ac (214), tc (215), ac (216), tc (217), ac (218), ac (220), ac (221), ac (223), ac (225), ac (226), ac (227), Editing mismatches: 20, all mismatches: 22, alignment length: 142, cluster length: 50, total number of As: 25 Locations in RNA: 180 186 190 192 194 196 204 206 208 210 212 214 216 218 220 221 223 225 226 227 Locations in genome: 56707396 56707390 56707386 56707384 56707382 56707380 56707372 56707370 56707368 56707366 56707364 56707362 56707360 56707358 56707356 56707354 56707352 56707349 56707348 56707347 Upstream nucleotide (in genome): t c t c c c c c c c c c t t t g c t a a Upstream nucleotide summary: a: 2, c: 11, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): c c c c c c c c c c c t t t g c t a a c Downstream nucleotide summary: a: 2, c: 13, g: 1, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 0, ca: 0, cc: 9, cg: 0, ct: 2, ga: 0, gc: 1, gg: 0, gt: 0, ta: 1, tc: 2, tg: 1, tt: 2, other: 0 >chr10:56707345-56707488 (-) caagatagtgaatataggaagatggaacaagtttagaaagaaagctgagtttcatttgaacatattgggtttgaaagatgttccattaaaatacaaacacatacacacacatgtgcacacacacacatatatagacattaaact >GD149544:88-229 (+) caagatagtgaatataggaagatggaacaagtttagaaagaaagctgagtttcatttgaacatattgggtttgaaagatgttccattaaaatccaaacccatccccccccatgtgcccccccccccccccctc-ccct-cccct End editing Edited EST: BE183009, type: ac Aligns to: chr11:67091593-67091846 (-+) All mismatches: ac (39), ac (41), ac (54), ac (55), ac (56), ac (58), ac (65), ga (66), ac (80), ac (82), ac (86), ac (88), ac (94), ac (99), ac (112), ac (114), ac (117), ac (118), ac (122), ac (130), ac (164), ac (168), ac (171), ac (175), ac (183), ac (261), ac (283), ac (293), Editing mismatches: 27, all mismatches: 28, alignment length: 256, cluster length: 253, total number of As: 91 Locations in RNA: 39 41 54 55 56 58 65 80 82 86 88 94 99 112 114 117 118 122 130 164 168 171 175 183 261 283 293 Locations in genome: 67091846 67091844 67091832 67091831 67091830 67091828 67091821 67091807 67091805 67091801 67091799 67091793 67091788 67091775 67091773 67091770 67091769 67091765 67091757 67091723 67091719 67091716 67091712 67091704 67091626 67091604 67091594 Upstream nucleotide (in genome): n a g a a c t g g g a c t g g a a c t a g t g g g a a Upstream nucleotide summary: a: 9, c: 3, g: 10, t: 4, other: 1 Downstream nucleotide (in genome): a a a a c g g g g a g t g g t a g g g a a g g a c a a Downstream nucleotide summary: a: 11, c: 2, g: 12, t: 2, other: 0 Dinucleotide summary: aa: 6, ac: 1, ag: 2, at: 0, ca: 0, cc: 0, cg: 2, ct: 1, ga: 4, gc: 1, gg: 4, gt: 1, ta: 0, tc: 0, tg: 4, tt: 0, other: 1 >chr11:67091593-67091846 (-) aaaagtttttcg-agaaacagtcggtagtct-agtttgatgagagtgaaaggtacatcgtaggatgttctgggagataaagccagaaaggtaggctggcatcagattcataaaaggccttcagcaaaagaatagagagtctgagaatggcgtgaaccccggggggcagagcctgcagtaagccgagatcgcgccactgcactccagcctgggcgacagccagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaa >BE183009:39-294 (+) cacagtttttcgcagcccccgtcggtcatctcagtttgatgcgcgtgcacggtacctcgtcggatgttctgggcgctaccgcccgaaaggtcggctggcatcagattcataaaaggccttcagcacaagcatcgagcgtctgagcatggcgtgaaccccggggggcagagcctgcagtaagccgagatcgcgccactgcactccagcctgggcgacagccagcctccgtctcaaaaaaaaaaaacaaaaaaaaaca End editing Edited EST: AL521630, type: ca Aligns to: chr19:39219912-39220700 (-+) All mismatches: ct (5), ac (10), ca (500), ca (501), ca (502), ca (504), ca (505), ca (506), ca (508), ca (509), ca (510), ca (512), ca (513), ca (514), ca (515), ag (518), ca (547), ca (565), ca (573), ca (576), ca (577), ca (578), ca (582), ca (583), ca (584), ca (585), ca (587), ca (588), ca (595), ca (596), ca (599), ca (626), ca (631), ca (636), ca (638), ca (640), ca (642), ca (644), ca (645), ca (649), ca (654), ca (655), ca (667), ca (675), ca (681), ca (683), ca (684), ca (688), ca (690), ca (693), ca (696), ca (701), ca (702), ca (703), ca (712), ca (714), ca (715), ca (719), ca (723), ca (728), ca (733), ca (735), ca (738), ca (739), ca (744), ca (751), ca (754), ca (756), ca (758), ca (760), ca (761), ca (763), ca (766), ca (768), ca (769), ca (771), ca (774), ca (787), Editing mismatches: 75, all mismatches: 78, alignment length: 788, cluster length: 288, total number of Cs: 84 Locations in RNA: 500 501 502 504 505 506 508 509 510 512 513 514 515 547 565 573 576 577 578 582 583 584 585 587 588 595 596 599 626 631 636 638 640 642 644 645 649 654 655 667 675 681 683 684 688 690 693 696 701 702 703 712 714 715 719 723 728 733 735 738 739 744 751 754 756 758 760 761 763 766 768 769 771 774 787 Locations in genome: 39220200 39220199 39220198 39220196 39220195 39220194 39220192 39220191 39220190 39220188 39220187 39220186 39220185 39220153 39220135 39220127 39220124 39220123 39220122 39220118 39220117 39220116 39220115 39220113 39220112 39220105 39220104 39220101 39220074 39220069 39220064 39220062 39220060 39220058 39220056 39220055 39220051 39220046 39220045 39220033 39220025 39220019 39220017 39220016 39220012 39220010 39220007 39220004 39219999 39219998 39219997 39219988 39219986 39219985 39219981 39219977 39219972 39219967 39219965 39219962 39219961 39219956 39219949 39219946 39219944 39219942 39219940 39219939 39219937 39219934 39219932 39219931 39219929 39219926 39219913 Upstream nucleotide (in genome): g c c a c c a c c a c c c a a g g c c g c c c t c g c t g a t g t t g c a g c a t g a c g a g t g c c g g c g g g a t g c t g g t t t c g g t c t g t Upstream nucleotide summary: a: 11, c: 25, g: 24, t: 15, other: 0 Downstream nucleotide (in genome): c c a c c a c c a c c c g a t t c c a c c c t c t c g g c a g t t g c a a c g t g a c g a g g a c c t g c a g g a t g c t g a t t t c g a t c t a t t Downstream nucleotide summary: a: 16, c: 26, g: 16, t: 17, other: 0 Dinucleotide summary: aa: 3, ac: 4, ag: 1, at: 3, ca: 6, cc: 9, cg: 5, ct: 5, ga: 5, gc: 10, gg: 4, gt: 5, ta: 2, tc: 3, tg: 6, tt: 4, other: 0 >chr19:39219912-39220700 (-) cagacaaagcaaggccggggctggtgggatggggtgcggttcaggggggcccggtctgccaactcagctcctctgctgcaaaagcggggtgcttgttggggccatctcctggcaatggcaagtgagtctggagcagagaggggagaggggctgggtgggtccccagccgtcaggtggtggtggcgccctctgctggcccctcgcatggcccaggcagttcctggacaaggcacatggggctttggcctggattggggaggccttgaagggacctcagagcaaaggaagagacctgggtgtggtgaggcatcccagggcatggaagggaccggttgtgctgtgggaatccactggcccctccttggttaaaaaagcacaacacatcatacatatttaccagaccagaagcgctggccccaagtctccccaacctggtcgggggaacctcctggccaacccacaaagagagagaggagagagcctgccccagcccctccctgcccacccacccaccccggaggactgcagagagtgctttgcatagatacagagtggaggaatgggactgtggggctgcccaggcccctcctggaggccgtcgggggtgttgggtcaggtctctggggcctcacaggtcgctctcgccatacaaggccgtggagaaggacttgtagtcgagggcaccgggcacggcgtcagggccctggtatggcgccatgcgggcgatgcagtactcggcctggtcggggggcagctctctccgcagctcctcagctgtgatgaagttct >AL521630:1-788 (+) cagataaag-caggccggggctggtgggatggggtgcggttcaggggggcccggtctgccaactcagctcctctgctgcaaaagcggggtgcttgttggggccatctcctggcaatggcaagtgagtctggagcagagaggggagaggggctgggtgggtccccagccgtcaggtggtggtggcgccctctgctggcccctcgcatggcccaggcagttcctggacaaggcacatggggctttggcctggattggggaggccttgaagggacctcagagcaaaggaagagacctgggtgtggtgaggcatcccagggcatggaagggaccggttgtgctgtgggaatccactggcccctccttggttaaaaaagcacaacacatcatacatatttaccagaccagaagcgctggccccaagtctccccaacctggtcgggggaacctcctggccaacccacaaagagagagaggagagagcctgccccagcmmmtmmmtraaaaaaaaaaaaaaaagggggamtgmagagagtgmtttgmatagataaagagtggaggaatgggaatgtggggatgaaaaggaaaataatggaggaagtagggggtgttgggtmaggtmtmtggggamtmaaaggtagatatagaaataaaaggaagtggrgaaggaattgtwgtagagggaaaagggaaaggagtaagggaaatggtatggagaaatgagggagatgaagtwataggaatggtaggggggaagatatataagaagataataagatgtgatgaagttat End editing Edited EST: AL576671, type: ca Aligns to: chr19:682804-683352 (-+) All mismatches: ca (26), ca (79), ta (139), ca (154), ca (318), ca (322), ca (345), ca (361), ca (367), ca (375), ca (379), ca (380), ca (385), ca (400), ca (401), ca (409), ca (410), ca (422), ca (423), ca (424), ca (426), ca (435), ca (438), ca (442), ca (444), ca (445), ca (454), ca (455), ca (457), ca (463), ca (465), ca (466), ca (467), ca (470), ca (472), ca (473), ca (478), ca (480), ca (481), ca (488), ca (490), ca (492), ca (496), ct (503), ca (508), ca (511), ca (514), ca (516), ca (517), ca (518), ca (519), ca (520), ca (521), ca (523), ca (528), ca (529), ca (540), ca (546), ca (547), ca (548), ca (554), ca (555), ca (556), ca (557), Editing mismatches: 62, all mismatches: 64, alignment length: 549, cluster length: 531, total number of Cs: 155 Locations in RNA: 26 79 154 318 322 345 361 367 375 379 380 385 400 401 409 410 422 423 424 426 435 438 442 444 445 454 455 457 463 465 466 467 470 472 473 478 480 481 488 490 492 496 508 511 514 516 517 518 519 520 521 523 528 529 540 546 547 548 554 555 556 557 Locations in genome: 683334 683281 683206 683042 683038 683015 682999 682993 682985 682981 682980 682975 682961 682960 682952 682951 682939 682938 682937 682935 682926 682923 682919 682917 682916 682907 682906 682904 682898 682896 682895 682894 682891 682889 682888 682883 682881 682880 682873 682871 682869 682865 682853 682850 682847 682845 682844 682843 682842 682841 682840 682838 682833 682832 682821 682815 682814 682813 682807 682806 682805 682804 Upstream nucleotide (in genome): c a c c c g t t c g c g a c c c c c c a g g g a c g c a a a c c g t c a t c t a a g g t a a c c c c c t g c g g c c t c c c Upstream nucleotide summary: a: 12, c: 29, g: 13, t: 8, other: 0 Downstream nucleotide (in genome): t a g a c a t t t c g a c a c t c c a t a a a c t c a t a c c g t c a t c g a a a g g t a c c c c c t g c a a c c g c c c n Downstream nucleotide summary: a: 18, c: 23, g: 8, t: 12, other: 1 Dinucleotide summary: aa: 5, ac: 4, ag: 0, at: 3, ca: 6, cc: 12, cg: 5, ct: 5, ga: 6, gc: 4, gg: 2, gt: 1, ta: 1, tc: 3, tg: 1, tt: 3, other: 1 >chr19:682804-683352 (-) cagggtggggtgggctgcctggctgaggctcctgtagacccaccaacctaggggcacttttctgggcaccacaggtaaggcactgcctgggggctggaggaggctggaggaggatgcccaagctccccacattcctcaccccagaccggggaagctggatatcctccgtgttgtcctctccccatagctggtctgaggctgtggtttacacgcaggcacaggtaggcgattctgagcatcaacgcagatggaggggagggtgagccgtcgtgggagaactggcccaagaccagcacctggctggtgtcgccagccccggctgcattggtgggtgaggcaggtctggctggagtctgggtctgcaggcctggccggggcaggttgtggg-ggaccaaggagccctgggtgtgaaccccactgtggaggcagcaggcacctagtggtgccactgggacacccggctccaggactccggatgtcacacatgcgtgagtcttggcgtctacacccccctcggggccagtgggtgagcagtggcccgtggtcccc >AL576671:9-557 (+) cagggtggggtggg-ngnatggctgaggctcctgtagacccaccaacctaggggcacttttctgggcaccaaaggtaaggmactgcctgggggctggaggaggctggaggaggatgcccaagctccccacaatmctmacmccagacaggggaagctggatatcctccgtgttgtcctctccccatagctggtctgaggctgtggtttamacgcaggcamaggtaggcgattytgagcatcaacgcagatggaggggagggtgagcmgtcgtgggagaamtggmccaagaccagcacctggctggtgtcgcaagcaccggmtgcattggtgggtgaggaaggtmtggctggagtatgggtatgmaggmatggaaggggaaggttgtgggtgdwaaaaggagmaatgggtgtgaamaaaaatgtggaggaagaaggaaaatagtggtgaaaatgggaaaaaaggataaaggaataaggatgtaaaaaatgagtgagttttggagtataaaaaaaaataggggaaagtgggtgagaagtggaaagtggtaaaa End editing Edited EST: AI039038, type: ca Aligns to: chr1:110135784-110136172 (-+) All mismatches: ca (25), ca (74), ca (83), ca (105), ca (122), ca (150), ca (154), ga (182), ca (195), ca (201), ca (216), ca (219), ca (242), ca (267), ca (269), ca (282), ca (297), ca (321), ca (322), ca (334), ca (377), ca (380), ca (387), Editing mismatches: 22, all mismatches: 23, alignment length: 388, cluster length: 364, total number of Cs: 73 Locations in RNA: 25 74 83 105 122 150 154 195 201 216 219 242 267 269 282 297 321 322 334 377 380 387 Locations in genome: 110136152 110136103 110136094 110136072 110136055 110136027 110136023 110135982 110135976 110135961 110135958 110135935 110135910 110135908 110135895 110135880 110135856 110135855 110135843 110135800 110135797 110135789 Upstream nucleotide (in genome): a c a a c a a a g g c g t t c a c c a g g a Upstream nucleotide summary: a: 9, c: 6, g: 5, t: 2, other: 0 Downstream nucleotide (in genome): a a a a c a t g a a a a t a a a c t a a a t Downstream nucleotide summary: a: 15, c: 2, g: 1, t: 4, other: 0 Dinucleotide summary: aa: 6, ac: 0, ag: 1, at: 2, ca: 3, cc: 2, cg: 0, ct: 1, ga: 5, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 1, other: 0 >chr1:110135784-110136172 (-) tttccagaaaagactagttacaaacaggagcaaacctgggctctttactcaccattttaatactgccgccaactataacagattaaaaatgtacacatgacaaagtggaaaaaagtcccaaaatgcaacagtttcagcaaaagaacatactggctaaggattactacagttaacatcggtacagtaaaaacgatggcaaacagggatttggcaccacatttacaaagtaaaagcatgcactgttaatacactttagatgtttctcaacagaaaaggccatgaagatggaaaacaagaggcaccatgtacaaaactccctataactgagacaaacaagcaagaatcaaagtggtcaatttagtaaatat-gtagcagcaaagtcactggtt >AI039038:5-392 (+) tttccagaaaagactagttaaaaacaggagcaaacctgggctctttactcaccattttaatactgccgcaaactataaaagattaaaaatgtacacatgaaaaagtggaaaaaagtcacaaaatgcaacagtttcagcaaaagaaaataatggctaaggattactacagttaacatcagtacagtaaaaaagatggaaaacagggatttggaacaacatttacaaagtaaaagcatgaactgttaatacactttagatgtttataaacagaaaaggcaatgaagatggaaaaaaagaggcaccatgtacaaaactcaatataactgagaaaaacaagcangaatcaaagtggtcaatttagtaaatatag-agaagaaa-gtcaatggtt End editing Edited EST: BX453271, type: ca Aligns to: chr7:5568792-5569036 (-+) All mismatches: ca (180), ca (283), ca (291), ca (292), ca (304), ca (325), ca (334), ca (344), ca (353), ca (354), ca (355), ca (362), ca (364), ca (365), ca (371), ca (374), ca (378), ca (379), ca (384), ca (385), ca (386), ca (387), ca (388), ca (393), ca (394), ca (395), ca (396), ca (402), ca (405), ca (406), ca (408), ca (419), ca (420), ca (421), Editing mismatches: 34, all mismatches: 34, alignment length: 244, cluster length: 243, total number of Cs: 78 Locations in RNA: 180 283 291 292 304 325 334 344 353 354 355 362 364 365 371 374 378 379 384 385 386 387 388 393 394 395 396 402 405 406 408 419 420 421 Locations in genome: 5569036 5568933 5568925 5568924 5568912 5568891 5568882 5568872 5568863 5568862 5568861 5568854 5568852 5568851 5568845 5568842 5568838 5568837 5568832 5568831 5568830 5568829 5568828 5568822 5568821 5568820 5568819 5568813 5568810 5568809 5568807 5568796 5568795 5568794 Upstream nucleotide (in genome): n g a c a a a g t c c g a c g g a c g c c c c a c c c c a c g a c c Upstream nucleotide summary: a: 9, c: 16, g: 7, t: 1, other: 1 Downstream nucleotide (in genome): c a c a a a a g c c g a c c t t c g c c c c c c c c a a c g g c c a Downstream nucleotide summary: a: 9, c: 18, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 6, ag: 0, at: 0, ca: 4, cc: 9, cg: 3, ct: 0, ga: 2, gc: 1, gg: 2, gt: 2, ta: 0, tc: 1, tg: 0, tt: 0, other: 1 >chr7:5568792-5569036 (-) cccagggcgtgatggtgggcatgggtcagaaggattcctatgtgggcgacgaggcccagagcaagagaggcatcctcaccctgaagtaccccatcgagcacggcatcgtcaccaactgggacgacatggagaaaatctggcaccacaccttctacaatgagctgcgtgtggctcccgaggagcaccccgtgctgctgaccgaggcccccctgaaccccaaggccaaccgcgagaagatgacccag >BX453271:180-423 (+) accagggcgtgatggtgggcatgggtcagaaggattcvtatgtgggcgacgaggcccagagcaagasaggcatcctcamcctgaagtaccccatcgagmacggaatcgtcaaaaactgggacgaaatggagaaaatctggcaccaaaccttctaaaatgagctgagtgtggmtaaagaggagaaaaccgtgatgatgaaagaggaaaaa-tgaaaaaaaaggcaaaaagagagaagatgaaaaag End editing Edited EST: AW885898, type: ac Aligns to: chr7:107564676-107564836 (-+) All mismatches: ac (23), ac (34), ac (40), ac (42), ac (44), ac (47), ac (50), ac (53), ac (59), ac (60), tg (62), ac (99), ac (107), ac (126), ac (160), ac (169), Editing mismatches: 15, all mismatches: 16, alignment length: 164, cluster length: 144, total number of As: 66 Locations in RNA: 23 34 40 42 44 47 50 53 59 60 99 107 126 160 169 Locations in genome: 107564821 107564811 107564806 107564804 107564802 107564799 107564796 107564793 107564787 107564786 107564747 107564739 107564720 107564686 107564678 Upstream nucleotide (in genome): g a t t a a t a t a g a a c c Upstream nucleotide summary: a: 7, c: 2, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): a a t a a g g a a t a a a a a Downstream nucleotide summary: a: 11, c: 0, g: 2, t: 2, other: 0 Dinucleotide summary: aa: 5, ac: 0, ag: 1, at: 1, ca: 2, cc: 0, cg: 0, ct: 0, ga: 2, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 1, tt: 1, other: 0 >chr7:107564676-107564836 (-) agactttagatggtgaacttgatg-aaa-agtataaaaaagtagaaaatttaattgccaaaaaaactgaagagtcagctgatgccagaaggaaagccgaaatgctacaaaatgaagcaaaaactcttttagctcaagcaaatagcaagctgcaac-tgctcaaa >AW885898:8-171 (+) agactttagatggtgcacttgatgcacagagtctcacaacgtcgacaatttcctggccaaaaaaactgaagagtcagctgatgccagaaggcaagccgacatgctacaaaatgaagcacaaactcttttagctcaagcaaatagcaagctgccacctgctccaa End editing Edited EST: BX343548, type: ac Aligns to: chr8:22279470-22280145 (-+) All mismatches: ac (4), ac (6), ac (10), ac (15), ac (19), ac (20), ac (130), ac (131), ac (132), ac (137), ac (152), ac (153), ac (157), ac (205), ac (221), ac (222), ac (227), ac (229), ac (230), ac (243), ac (270), ac (278), ac (289), ac (291), ac (295), ac (296), ac (297), ac (298), ac (300), ac (312), ac (313), ac (314), ac (316), ac (324), ac (325), ac (343), ac (344), ac (348), ac (350), ac (351), ac (354), ac (357), ac (359), ac (360), ac (434), ac (440), ac (441), ac (443), ac (446), ac (452), ac (460), ac (486), ac (563), tg (597), cg (622), ca (648), Editing mismatches: 53, all mismatches: 56, alignment length: 674, cluster length: 562, total number of As: 188 Locations in RNA: 4 6 10 15 19 20 130 131 132 137 152 153 157 205 221 222 227 229 230 243 270 278 289 291 295 296 297 298 300 312 313 314 316 324 325 343 344 348 350 351 354 357 359 360 434 440 441 443 446 452 460 486 563 Locations in genome: 22280142 22280140 22280135 22280130 22280126 22280125 22280014 22280013 22280012 22280007 22279992 22279991 22279987 22279939 22279923 22279922 22279917 22279915 22279914 22279901 22279874 22279866 22279855 22279853 22279849 22279848 22279847 22279846 22279844 22279832 22279831 22279830 22279828 22279820 22279819 22279801 22279800 22279796 22279794 22279793 22279790 22279787 22279785 22279784 22279710 22279704 22279703 22279701 22279698 22279692 22279684 22279658 22279581 Upstream nucleotide (in genome): t c c a t a c a a c t a t c c a g g a a a c t g c a a a t c a a g c a g a g g a g c g a c g a a g g t c a Upstream nucleotide summary: a: 21, c: 13, g: 12, t: 7, other: 0 Downstream nucleotide (in genome): c g c g a t a a a g a a g g a a g a g a t a g c a a a t c a a g c a g a g g a g g g a c t a a t g a a c a Downstream nucleotide summary: a: 25, c: 7, g: 16, t: 5, other: 0 Dinucleotide summary: aa: 10, ac: 1, ag: 6, at: 4, ca: 6, cc: 2, cg: 4, ct: 1, ga: 6, gc: 2, gg: 4, gt: 0, ta: 3, tc: 2, tg: 2, tt: 0, other: 0 >chr8:22279470-22280145 (-) tttacagtccacataagttaattttcttttctaatttcttctcatacacctgagttatttaaaaaaatactgtgatggaactgcagaactgtaaagggaaataagaacaataaaatcctaacctctcttgcaaaaatcagacaactttgttttaaagtagatgcccagcatattgccatctctttggaagaggacttactatactcagctcttacgctacccaaacagagaagccttctttttaaaacccaaggttaaggaccagtgaagaatagctccaatttgacactagacacaaaatacctttgggggcaaagacaggggcaagctgtgtgccggtggtgaagtgagaaggagcagaacccctgtccctgcctcactgttcctgcacgtgacatacactttccttgctaacttattaataggagctggtgcatctggaaaatgaggtcgaagctgctaatgccaggggtgaaaaagtcctcccactgacttgctactccttagacttctaatatgtacaaatgcttgaaacagcaaattcaacaactaaaaatcaaaagaaattgccaatttttgactcatgaggcaaagctgttgccacaatcagtggcgactcaagtcagacgatgtgagcgtctccgcccctcctaagctccgactaggactgacctct >BX343548:1-674 (+) tttcccgt-ccnntncgttccttttcttttctaatttcttctcatacacctgngttatttaaaaaamtactgtgatggaactgcngaactgtnaagggnaataagaacaataaaatcctaacctctcttg-cccmmtccgacaactttgttttccagtcgatgcccagcatattgccatctctttggaagaggacttactatactccgctcttacgctacccccacmgcgccgccttctttttacmacccaaggttaaggaccagtgaagactagctcccatttgacactcgccaccccctccctttgggggccccgccaggggcccgctgtgtgccggtggtgccgtgcgccggcgccgcccccctgtccctgcctcactgttcctgcacgtgacatmcactttccttgctaacttattaataggagctggtgcctctggccactgcggtcgcagctgctcatgccaggggtgaaamagtcctccccctgacttgctactccttagacttctaatatgtacaaatgcttgnsacagcaaattcaacaactaaamatcaaaagacattgccaatttttgactcatgaggcaaagctgtggccacaatcagtggcgactcaagtgagacgatgtgagcgtctccgcccctactaarcwccgactaggactgacctct End editing Edited EST: AA682638, type: ca Aligns to: chr12:103232682-103232996 (--) All mismatches: ca (25), ca (27), ca (35), ga (85), ca (88), ca (94), ca (116), ca (156), ca (205), ca (222), ca (236), ca (244), ca (247), ca (251), ca (286), ca (290), ca (302), Editing mismatches: 16, all mismatches: 17, alignment length: 315, cluster length: 278, total number of Cs: 50 Locations in RNA: 25 27 35 88 94 116 156 205 222 236 244 247 251 286 290 302 Locations in genome: 103232706 103232708 103232716 103232769 103232775 103232797 103232837 103232886 103232903 103232917 103232925 103232928 103232932 103232967 103232971 103232983 Upstream nucleotide (in genome): t t t t a t t t t t g t t c c t Upstream nucleotide summary: a: 1, c: 2, g: 1, t: 12, other: 0 Downstream nucleotide (in genome): a t c a a t c a c t t a t a c c Downstream nucleotide summary: a: 6, c: 5, g: 0, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 1, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 4, tc: 4, tg: 0, tt: 4, other: 0 >chr12:103232682-103232996 (-) gtgaaattggaatcctttgcagtgccctccagaaaataaagtaaagccatggacagaatgtggtctgtcagctgtgaatctgttgatggagatccaactatttctttcatcagaaaaagtccgaaaagcaaaccttaatttgaaataacagccttaaatcctttacaagatggagaaacaacaaataagtcaaaataatctgaaatgacaggatatgagtacatactcaagagcataatggtaaatcttttggggtcatctttgatttagagatgataatcccatactctcaattgagttaaatcagtaatctgt >AA682638:1-315 (-) gtgaaattggaatactttgcagtgcactcaagaaaataaagtaaagccatggacagaatgtggtatgtaagatgtgaatatgttgatggagatacaactatttctttcataagaaaaagtccgaaaagcaaaccttaatttgaaataacagccttaaatactttacaagatggagaaacaacaaataagtcaaaataatatgaaatgacaggatatgagtaaatactaaaaagcataatggtaaatcttttggggtcatctttgatttagagatgataataccatactataaattgagttaaatcagtaatctgt End editing Edited EST: AL562922, type: ca Aligns to: chr12:120636356-120636546 (--) All mismatches: ca (357), ca (359), ca (380), ca (386), ca (389), ca (395), ca (406), ca (413), ca (428), ca (437), ca (440), ca (443), ca (449), ca (454), ca (461), ca (482), ca (494), ac (514), Editing mismatches: 17, all mismatches: 18, alignment length: 192, cluster length: 138, total number of Cs: 41 Locations in RNA: 357 359 380 386 389 395 406 413 428 437 440 443 449 454 461 482 494 Locations in genome: 120636388 120636390 120636411 120636417 120636420 120636426 120636437 120636444 120636459 120636468 120636471 120636474 120636480 120636485 120636492 120636513 120636525 Upstream nucleotide (in genome): a t a g g a g t t t a t a g c a t Upstream nucleotide summary: a: 6, c: 1, g: 4, t: 6, other: 0 Downstream nucleotide (in genome): a a a a a a a a t t a a a t a a a Downstream nucleotide summary: a: 14, c: 0, g: 0, t: 3, other: 0 Dinucleotide summary: aa: 6, ac: 0, ag: 0, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 3, gc: 0, gg: 0, gt: 1, ta: 4, tc: 0, tg: 0, tt: 2, other: 0 >chr12:120636356-120636546 (-) tca-gagtgatgtgcagctgatcaagactggagacaaagtgggagccagcgaagccacgctgctgaacatgctcaacatctcccccttctcctttgggctggtcatccagcaggtgttcgacaatggcagcatctacaaccctgaagtgcttgatatcacagaggaaactctgcattctcgcttcctggagg >AL562922:325-516 (-) tcctgagtgatgtgcagntgataaagactggagaaaaagtgggagccagcgaagcaacgntgatgaaaatgntaaaaatatcccccttatcctttgggctggtaatccagaaggtgttcgaaaatggaagaatctaaaaccctgaagtgcttgatataaaagaggaaantctgnattctcgcttcctggagg End editing Edited EST: BG991161, type: ac Aligns to: chr14:73959300-73959541 (--) All mismatches: ac (29), ac (38), ac (47), ac (100), ac (115), ac (118), ac (136), ac (154), ac (178), ac (196), ac (218), ac (226), ac (232), ac (235), ac (239), ac (257), Editing mismatches: 16, all mismatches: 16, alignment length: 243, cluster length: 228, total number of As: 57 Locations in RNA: 29 38 47 100 115 118 136 154 178 196 218 226 232 235 239 257 Locations in genome: 73959309 73959317 73959326 73959380 73959394 73959397 73959415 73959433 73959457 73959475 73959497 73959505 73959511 73959514 73959518 73959536 Upstream nucleotide (in genome): c c c c c c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 16, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): g g g t g c a c g a g t g a a a Downstream nucleotide summary: a: 5, c: 2, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 5, cc: 2, cg: 7, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr14:73959300-73959541 (-) ctcacaaactctggataagaaccaagcaacagttccatggcatcagcttgctgggggtatatttccaagcacttgggttcttccagatgatacacacgggagttttccactgtgtaatagagaaacaaatggcccccctcacccacca-gccgagctatcccatcctgaagcatatggacttctgtttctgttgtcaactgggcccccacgtttacaggttctcca-gcctcccagcgaattgg >BG991161:20-262 (-) ctcaccaactctggataagaacccagccaccgttccctggcatccgcttgctgggggtatatttcccagcacttgggttcttcccgatgatacacacgggagttttcccctgtgtaatagagaaaccaatggcccccctcaccccccccgccgagctatcccctcctgaagcatatggacttctgtttctgttgtcaactgg-cccccacgtttaccggttctcccagcctccccgcgaattgg End editing Edited EST: AI016973, type: ca Aligns to: chr14:92335753-92336073 (--) All mismatches: ca (11), ca (64), ca (65), ca (83), ca (95), ca (114), ca (130), ca (136), ca (142), ca (144), ca (147), ca (164), ca (219), ca (229), ca (254), ca (255), ca (296), ca (301), Editing mismatches: 18, all mismatches: 18, alignment length: 321, cluster length: 291, total number of Cs: 59 Locations in RNA: 11 64 65 83 95 114 130 136 142 144 147 164 219 229 254 255 296 301 Locations in genome: 92335753 92335806 92335807 92335825 92335837 92335856 92335872 92335878 92335884 92335886 92335889 92335906 92335961 92335971 92335996 92335997 92336038 92336043 Upstream nucleotide (in genome): g c a g c c t c c t t a t t c t a t Upstream nucleotide summary: a: 3, c: 6, g: 2, t: 7, other: 0 Downstream nucleotide (in genome): n c c t c a c a a c t a a t t c c a Downstream nucleotide summary: a: 6, c: 7, g: 0, t: 4, other: 1 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 0, ca: 3, cc: 2, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 2, tc: 3, tg: 0, tt: 2, other: 1 >chr14:92335753-92336073 (-) aggatcgaagggtttttagagaatgtgtttcaaaaccatgcctggtattttcaaccataaaagaagtttcagttgtccttaaatttgtataacggtttaattctgtcttgttcattttgagtatttttaaaaaatatgtcgtagaattccttcgaaaggccttcagacacatgctatgttctgtcttcccaaacccagtctcctctccattttagcccagtgttttctttgaggaccccttaatcttgctttctttagaatttttacccaattggattggaatgcagaggtctccaaactgattaaatatttgaagagagc >AI016973:11-331 (-) aggatcgaagggtttttagagaatgtgtttaaaaaacatgcctggtattttcaaccataaaagaagtttcagttgtaattaaatttgtataacggtttaattatgtcttgttaattttgagtatttttaaaaaatatgtcgtagaattccttcgaaaggccttcagaaacatgctatgttctgtattacaaaaccaagtctactctccattttagccaagtgttttctttgaggacaccttaatcttgatttctttagaatttttaaacaattggattggaatgcagaggtctccaaactgattaaatatttgaagagaga End editing Edited EST: BG988838, type: ac Aligns to: chr17:76679402-76679934 (--) All mismatches: ac (32), ac (42), ac (46), ac (55), ac (62), ac (77), ac (81), ac (95), ac (102), ac (134), ac (138), ac (141), ac (178), ac (219), ac (257), tc (288), ac (311), ac (315), ac (324), ac (340), ac (366), ac (370), ac (384), ac (406), ac (410), ac (414), ac (417), ac (462), ag (500), Editing mismatches: 27, all mismatches: 29, alignment length: 534, cluster length: 431, total number of As: 100 Locations in RNA: 32 42 46 55 62 77 81 95 102 134 138 141 178 219 257 311 315 324 340 366 370 384 406 410 414 417 462 Locations in genome: 76679431 76679441 76679445 76679454 76679461 76679476 76679480 76679494 76679501 76679533 76679537 76679540 76679577 76679618 76679656 76679710 76679714 76679723 76679739 76679765 76679769 76679783 76679805 76679809 76679813 76679816 76679861 Upstream nucleotide (in genome): c c c c c c c c c c c c c c c c c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 27, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): g a a a c g g g g g g g a g g g g t g t a g g g c c g Downstream nucleotide summary: a: 5, c: 3, g: 17, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 5, cc: 3, cg: 17, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr17:76679402-76679934 (-) aattaaaccctagaagtgagaatggggagggtaaaaaccagaagcagaattggctgagaactgtttaggaaacagaccagctgttgccctcacctcatgcccctgagggcctgtccccaccacccaggcagaagtctgagtgctcgctcacaggagagactgaccaagcatttctggatgagggactctaggcccagttgaaggtgggggcattttccccagacaggagtgtggggtaaatgcagccttctcgaatgctgaggacttctcccacccccagcttctcctcactcagctctcagaaccacaggtagccaggtctgtagcttgcagacagagtgggaaacttctctgcccaagaagagatgcgtgaggttatttagtcagattccccagcagacagcctagtgagagggcccttgtagatggtcacagtgcacaggcttcaggtcccagtcagctcttagtcttccactcttcaaatgggacaaccaaggagtccca-gatacctgaggaattcctgccggctgaga >BG988838:2-535 (-) aattaaaccctagaagtgagaatggggagggtaaagaccagaagcagaattggctgagaactgtttaggaaaccgaccagctgttgccctcacctcatgcccctgagggcctgtccccccccccccgnccgaagtctgagtgctcgctcaccggagagactgacccagcctttctggatgagggactctaggccccgttgaaggtgggggccttttcccccgaccggagtgtggggtaaatgcagccctctcgaatgctgaggacttctcccaccccccgcttctcctcactcagctctcagaaccacaggtagcccggtctgtagcttgcagacagagtgggaaacttctctgccccagaagagatgcgtgaggttatttagtcagattcccccgccgaccgcctagtgagagggcccttgtagatggtcaccgtgcaccggcttcaggtccccgtccgctcttagtcttcccctcttccaatgggaccacccaggagtccccagatacctgaggaattcctgccggctgaga End editing Edited EST: BG990353, type: ac Aligns to: chr19:18670132-18670474 (--) All mismatches: ac (14), ac (23), ac (36), ac (50), ac (88), ac (131), ac (162), ac (179), ac (192), ac (196), ac (206), ag (212), ac (242), ac (256), ac (289), ac (292), ac (305), ac (310), ac (319), ac (326), ac (334), ac (352), Editing mismatches: 21, all mismatches: 22, alignment length: 340, cluster length: 342, total number of As: 98 Locations in RNA: 14 23 36 50 88 131 162 179 192 196 206 242 256 289 292 305 310 319 326 334 352 Locations in genome: 18670132 18670141 18670155 18670171 18670209 18670252 18670283 18670300 18670313 18670317 18670327 18670363 18670377 18670410 18670413 18670426 18670431 18670440 18670447 18670455 18670473 Upstream nucleotide (in genome): c c c a c c c c c c c c c c c c c c c c c Upstream nucleotide summary: a: 1, c: 20, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): n g t c a g a a a a a g g g g g g g a g a Downstream nucleotide summary: a: 8, c: 1, g: 10, t: 1, other: 1 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 0, ca: 8, cc: 0, cg: 10, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr19:18670132-18670474 (-) caaaggtgtgaatctgaacaggtgcacaatatccagctgtgacaggacagtggcttcttacagcagctgatttctgcctgacttctgatgtttctccaggaaaaaggaaacagggattttttttttctgggaaattgcctcattgacaaatgtcagcaatcaatacttttttccaagatatcatggaggccaagagcatctatttgtgatctgtatctggtcagtggtttgcagcaccttctagaaataaggtgccacacccagcaaaacccccttccctctaataataactatggttattgaactcctatgacatgccatgcagagacacccagtctccaca >BG990353:14-353 (-) ccaaggtgtgaatctgaaccggtgcaccatatcccgctgtgaccggaccgtggcttcttaccgccgctgatttctgcctgacttctgatgtttctcccggaaaaaggaaaccgggattttttttttctgggaaattgcctcgttgaccaatgtcagccatccatacttttttcccagatatcatggaggcccagagcatctatttgtgatctgtatctggtccgtggtttgcagcaccttctagaaataaggtgccacacccagccaaacccccttccctctaataataactatggttattgac-tcctatgacat-ccctgcaga-acaccccgtctccacc End editing Edited EST: AI003221, type: ca Aligns to: chr19:42479780-42479953 (--) All mismatches: ga (21), ca (28), ca (35), ca (38), ca (54), ca (57), ca (68), ca (71), ca (75), gc (76), ca (82), ca (89), ca (97), ca (107), ca (117), ca (131), ca (133), ca (136), ca (139), ca (175), ca (183), Editing mismatches: 19, all mismatches: 21, alignment length: 173, cluster length: 157, total number of Cs: 45 Locations in RNA: 28 35 38 54 57 68 71 75 82 89 97 107 117 131 133 136 139 175 183 Locations in genome: 42479797 42479804 42479807 42479823 42479826 42479837 42479840 42479844 42479851 42479858 42479866 42479876 42479887 42479901 42479903 42479906 42479909 42479945 42479953 Upstream nucleotide (in genome): t t g g c g g g t t t g a t g c t g n Upstream nucleotide summary: a: 1, c: 2, g: 8, t: 7, other: 1 Downstream nucleotide (in genome): a c c t t t a a t t g c a t t c c a c Downstream nucleotide summary: a: 5, c: 6, g: 1, t: 7, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 0, cc: 1, cg: 0, ct: 1, ga: 3, gc: 2, gg: 0, gt: 3, ta: 1, tc: 2, tg: 1, tt: 3, other: 1 >chr19:42479780-42479953 (-) ccagggtgcaattgtggctgtgaccggggatggtgtgaacgactcccccgctctgaagaaggccgacattggggtggccatgggcatcgctggctctgacgtctccaagcaggcagctgacatgatcctgctggacgacaactttgcctccatcgtcacaggggtggaggaggg >AI003221:11-183 (-) acagggtgaaattgtggctgtgaccggggatggtgtgaacgactaccacgatatgaagaaggccgaaattggggtg-acatgggcatagctggctatgacgtatccaacaaggaagatgacatgatcatgatggacgacaactttgactacatcgtaacagggatggaggaggg End editing Edited EST: CV348683, type: ac Aligns to: chr20:35856951-35857154 (--) All mismatches: ac (115), ac (139), ac (153), ac (157), ac (160), ac (193), ac (198), ac (220), ac (226), ac (232), ac (238), ac (265), ac (279), ac (296), ac (301), Editing mismatches: 15, all mismatches: 15, alignment length: 206, cluster length: 187, total number of As: 47 Locations in RNA: 115 139 153 157 160 193 198 220 226 232 238 265 279 296 301 Locations in genome: 35856958 35856982 35856996 35857000 35857003 35857036 35857041 35857063 35857069 35857075 35857081 35857108 35857122 35857139 35857144 Upstream nucleotide (in genome): c c c c c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 15, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a g c a a a g a a g g a a g t Downstream nucleotide summary: a: 8, c: 1, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 8, cc: 1, cg: 5, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr20:35856951-35857154 (-) cacat-a-ccacattccagaggattgggttcttcaaagtggcatctccaatgattaagtagagagtgtaggtgccagaggcagagtcaaattcaatctttctttcagaggtatccagttcaaacttgtacacgttcttgttgtctggctcggcaacaaacaccacttcctggccagtcttctggttatggagtcggacaaatgtct >CV348683:108-313 (-) cacatcagccaccttcccgaggattgggttcttccaagtggcatctcccatgattaagtagagagtgtaggtgcccgaggccgagtccaattccatctttctttcagaggtatcccgttccaacttgtacacgttcttgttgtctggctcggccaccaaccccacttcctggcccgtcttctggttatggagtcggaccaatgtct End editing Edited EST: AI003865, type: ca Aligns to: chr20:44170486-44170793 (--) All mismatches: ca (78), ca (89), ca (104), ca (114), ca (125), ca (127), ca (133), ca (136), ca (139), ca (143), ca (148), ca (152), ca (159), ca (172), ca (176), ca (177), ca (178), ca (189), ca (194), ca (197), ca (203), ca (210), ca (214), ca (222), ca (223), gt (230), ca (235), ca (247), ca (273), Editing mismatches: 28, all mismatches: 29, alignment length: 309, cluster length: 195, total number of Cs: 62 Locations in RNA: 78 89 104 114 125 127 133 136 139 143 148 152 159 172 176 177 178 189 194 197 203 210 214 222 223 235 247 273 Locations in genome: 44170561 44170572 44170587 44170597 44170608 44170610 44170616 44170619 44170622 44170626 44170631 44170635 44170642 44170655 44170659 44170660 44170661 44170672 44170677 44170680 44170686 44170693 44170696 44170704 44170705 44170717 44170729 44170755 Upstream nucleotide (in genome): c t t a t g t c c t c t g c c c g c g t t t g c t c a g Upstream nucleotide summary: a: 2, c: 10, g: 6, t: 10, other: 0 Downstream nucleotide (in genome): t t c a t t t a t t t t t c t c c a a a a c t a c t t c Downstream nucleotide summary: a: 7, c: 7, g: 0, t: 14, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 1, ca: 3, cc: 2, cg: 0, ct: 5, ga: 1, gc: 2, gg: 0, gt: 3, ta: 2, tc: 3, tg: 0, tt: 5, other: 0 >chr20:44170486-44170793 (-) gctttccctgattggataaggatgcactggaagaactgccagaatgtggctcatgctctgagtactgttcctgtacctgacggatgctccagactggctt-ccagtttcactctcagcattccaagatcttagcccttcccagaacagaacgcttgcatctacctcctcttcctccatctttggctcttttgatgcacaatatccatccgttttgatttcatctttatgtcccctttatctccaacttctagaactcccagtttatacctgtgtcactctcaattttttccagtaaagtacttgatgta >AI003865:3-311 (-) gctttccctgattggataaggatgcactggaagaactgacagaatgtggctcatgctctgagtaatgttcctgtacatgactgatgctaaagactggattcacagtttaactctaagaattcaaagatcttagaaattcacagaacagaacgattgcatatacatcctattcatcaatatttggatattttgatgcaaaatatccatacgttttgatttcatatttatgtcccatttatctccaacttctagaactcccagtttatacctgtgtcactctcaattttttccagtaaagtacttgatgta End editing Edited EST: BG010262, type: ac Aligns to: chr21:42552351-42552735 (--) All mismatches: ac (14), ac (26), ac (31), ac (38), ac (56), ac (64), ac (104), ac (119), ac (133), ac (144), ac (150), ac (156), ac (216), ac (230), ac (269), ac (283), ac (286), ac (290), ac (304), ac (313), ac (345), ac (378), Editing mismatches: 22, all mismatches: 22, alignment length: 386, cluster length: 364, total number of As: 93 Locations in RNA: 14 26 31 38 56 64 104 119 133 144 150 156 216 230 269 283 286 290 304 313 345 378 Locations in genome: 42552351 42552364 42552368 42552374 42552392 42552400 42552440 42552455 42552469 42552480 42552486 42552492 42552552 42552566 42552605 42552619 42552622 42552626 42552640 42552649 42552681 42552714 Upstream nucleotide (in genome): c c c c c c c c c c c c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 22, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): n g g g g g c t a a g g a a a a t a a c a g Downstream nucleotide summary: a: 9, c: 2, g: 8, t: 2, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 9, cc: 2, cg: 8, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr21:42552351-42552735 (-) gcacatatattaactctggacaggttgaggttaacattcaaaagatctatgagcaagctacctagttacatagatataaccagggcactgcccccaactatatctggtcaaccatcaaaagtgccttcccaagtctcacctgtttttcacctcttctaggacctttgacaactgtcttgttacaaatgtttggtccttgcttctttaacctcttagtaaagtttgtgtattctagattaccacagttccagagacaatgctggcacaaggcttccagcccatcctgtccactgacacggagaatgaaatcgtcctgcctctgggctccttagatcaggtatccagagatttttactcctcca-gtgcca-ggcagggcctacgtcca >BG010262:14-399 (-) gcacatatattaactctggaccggttgaggttaacattcaaaagatctatgagccagctacctagttacatagatataaccagggccctgccccccactatatctggtccaccctccaaagtgccttccccagtctcacctgtttttcacctcttctaggacctttgaccactgtcttgttaccaatgtttggtccttgcttctttaacctcttagtaaagtttgtgtattctagattaccaccgttcccgagaccatgctggcaccaggcttccagcccctcctgtccactgacccggagaatgaaatcgtcctgcctctgggctccttagatccggtatcccgagatttttactcctcccagtgcccaggccgg-cctacgtccc End editing Edited EST: AA860945, type: ca Aligns to: chr2:225338655-225339095 (--) All mismatches: ca (2), ca (32), ca (59), ca (62), ca (80), ca (88), ca (106), ta (112), ca (123), ca (127), ca (130), ca (142), ca (161), ca (163), ca (165), ca (185), ca (201), ac (205), ca (212), ca (215), ca (218), ca (220), ca (221), ca (224), ca (239), ca (248), ca (258), ca (271), ca (321), ca (342), Editing mismatches: 28, all mismatches: 30, alignment length: 441, cluster length: 341, total number of Cs: 59 Locations in RNA: 2 32 59 62 80 88 106 123 127 130 142 161 163 165 185 201 212 215 218 220 221 224 239 248 258 271 321 342 Locations in genome: 225338656 225338686 225338713 225338716 225338734 225338742 225338760 225338777 225338781 225338784 225338796 225338815 225338817 225338819 225338839 225338855 225338866 225338869 225338871 225338874 225338875 225338878 225338893 225338902 225338912 225338925 225338975 225338996 Upstream nucleotide (in genome): a a g g t a c g t g t c t a a a t t t c a a t t a a a c Upstream nucleotide summary: a: 11, c: 4, g: 4, t: 9, other: 0 Downstream nucleotide (in genome): a a g t g a t t a t a t c t c a t t t a c g a t t t a t Downstream nucleotide summary: a: 9, c: 3, g: 3, t: 13, other: 0 Dinucleotide summary: aa: 5, ac: 2, ag: 1, at: 3, ca: 1, cc: 0, cg: 0, ct: 3, ga: 0, gc: 0, gg: 1, gt: 3, ta: 3, tc: 1, tg: 1, tt: 4, other: 0 >chr2:225338655-225339095 (-) aggtaactcagcagttgaagg-cgcgattcttaccaagtccagttgttattaagaaacgtattgaaggacttattgagagagaatatttggcacgaacacctgaggatcgcaaagtatacacatatgtagcataaaatgcgttcagaaatttgatttattcttggactgtactcttcgcatggactgggaagttcttttaaatcattaaatattaagacgaccatc-tcttctattaaattacagtacatgttctagaccattgagatcaagcctttactccctttgagagtttccaacatcagttgattgagcttcaggctttacaacgtttatccctgtagagatcatctttacagttcctcgggaaaatgtgaatgtgctgcgttttgttttctttactgtatgaaaacaggaaaataaaagagaaatttagaaaataca >AA860945:1-441 (-) aggtaactcagcagttg-aggacgcgattcttaccaagtccagttgttattaagaaacgtattgaaggacttattgagagagaatatttggcacgaacacatgaggatcgcaaagtatacaaatatgtagcataaaatgcgttcagaaatttgatttattcttggactgtaatcttcgcatggaatgggaagttattttaaataattaaatattaagaagaaa-tactattatattaacttaaagtacatgttctagaacattgagatcaagcctttaatacatttgagagtttccaacataagttgattgagattaaggatttacaacgtatatccatgtagagatcatctttaaagttcctagggaaaatgtgaatgtgatgagttttgttttctttactgtatgaaaaaaggaaaataaaagagaaatttagaaaataaa End editing Edited EST: BG987179, type: ac Aligns to: chr4:16872836-16873172 (--) All mismatches: ac (21), ac (28), ac (31), ac (58), ac (78), ac (88), ac (110), ac (117), ac (125), ac (134), ac (147), ac (150), ac (154), ac (213), ac (237), ac (241), ac (253), ac (306), ac (313), ac (319), ac (326), Editing mismatches: 21, all mismatches: 21, alignment length: 337, cluster length: 306, total number of As: 100 Locations in RNA: 21 28 31 58 78 88 110 117 125 134 147 150 154 213 237 241 253 306 313 319 326 Locations in genome: 16872840 16872847 16872850 16872877 16872897 16872907 16872929 16872936 16872944 16872953 16872966 16872969 16872973 16873032 16873056 16873060 16873072 16873125 16873132 16873138 16873145 Upstream nucleotide (in genome): c c c c c c c c c c c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 21, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): g t c a t c a t t a a a g a t c a c t g t Downstream nucleotide summary: a: 7, c: 4, g: 3, t: 7, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 7, cc: 4, cg: 3, ct: 7, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr4:16872836-16873172 (-) acagagatgaatatttgaacttcattcattcatcagtgacatgagtcactgctctcctgaattggataatacttctcgaatactggaagaatatttcctcaaattttctgccactcattatgttacagcttcaggcatgcaaactttcatacttaattcatattattaacatttttgcatcactttcttaaatctacacagtcaacaaaataaaaactcaagccctgcattttagcatttgccaatttctgtagtaaatactcccactatggctcatttgaagctacatatattcaaagtgtggggttgagaaaagacacacaccattatacagtat >BG987179:17-353 (-) acagagatgaatatttgaacttcattccttcatccgtgacctgagtccctgctctcctgaattggataatacttctcgaatactggaagaatatttcctccaattttctgcccctccttatgttacagcttcaggcatgccaactttcatacttaattcatattattaacatttttgcatcactttcttaaatctacaccgtccaccaaataaaaactccagccctgccttttagcctttgcccatttctgtagtaaatactccccctatggctcctttgaagctacatatattccaagtgtggggttgagaaaagacacacccccttataccgtat End editing Edited EST: BG987316, type: ac Aligns to: chr8:101721687-101721961 (--) All mismatches: ac (179), ac (191), ac (195), ac (205), ag (209), ac (217), ac (236), ac (255), ac (273), ac (286), ac (311), ac (317), ac (342), ac (344), ac (350), ac (358), ac (368), ac (400), Editing mismatches: 17, all mismatches: 18, alignment length: 275, cluster length: 222, total number of As: 66 Locations in RNA: 179 191 195 205 217 236 255 273 286 311 317 342 344 350 358 368 400 Locations in genome: 101721714 101721726 101721730 101721740 101721752 101721771 101721790 101721808 101721821 101721846 101721852 101721877 101721879 101721885 101721893 101721903 101721935 Upstream nucleotide (in genome): c c c c c c c c c c c g c c c c c Upstream nucleotide summary: a: 0, c: 16, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): g g g a a a g g a t a a g g c g a Downstream nucleotide summary: a: 7, c: 1, g: 8, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 6, cc: 1, cg: 8, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr8:101721687-101721961 (-) aggttatgatggagggtggtcgcagcaaagggtttggttttgtatgtttctcctccccagaagaagccactaaagcagttacagaaatgaacggtagaattgtggccacaaagccattgtatgtagctttagctcagcgcaaagaagagcgccaggctcacctcactaaccagtatatgcagagaatggcaagtgtacgagctgttcccaaccctgtaatcaacccctaccagccagcacctccttcaggttacttcatggcagctatcccacag >BG987316:152-426 (-) aggttatgatggagggtggtcgcagccaagggtttggttttgtatgtttctcctcccccgaagaagcccctaaagccgttaccgcaatgaacggtagaattgtggccaccaagcccttgtatgtagctttagctcagcgccaagaagagcgcccggctcacctcactaanccgtatatgcagagaatggccagtgtacgagctgttccccaccctgtgatccacccctacccgcccgcacctccttccggttacttcatggcagctatcccacag End editing Edited EST: BF827241, type: ac Aligns to: chr9:134319063-134319510 (--) All mismatches: ac (7), ac (20), ac (45), ac (77), ac (87), ac (120), ac (140), ac (148), ac (158), ac (185), ac (220), ac (223), ac (233), ac (235), ac (240), ac (249), ac (273), ac (286), ac (293), ac (304), ac (341), ac (368), ac (387), Editing mismatches: 23, all mismatches: 23, alignment length: 448, cluster length: 381, total number of As: 93 Locations in RNA: 7 20 45 77 87 120 140 148 158 185 220 223 233 235 240 249 273 286 293 304 341 368 387 Locations in genome: 134319069 134319082 134319107 134319139 134319149 134319182 134319202 134319210 134319220 134319247 134319282 134319285 134319295 134319297 134319302 134319311 134319335 134319348 134319355 134319366 134319403 134319430 134319449 Upstream nucleotide (in genome): c c c c c c c c c c c c c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 23, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a c g a g a a a g a g g g c g g a g a g a g a Downstream nucleotide summary: a: 10, c: 2, g: 11, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 10, cc: 2, cg: 11, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr9:134319063-134319510 (-) cagctccacaccttgaaagccgtgttgcctggaagtgggcttttgaagggagtcttgtcacaagggtgctctgtgctggcagatgccacgagggtgctgagggtggcaagggagactgctgctgacagcatcatgccccttcccagctgacctgcaaggaccagtgcctgcttacaaatggaaagaggtaagacatcacagccgctccaggccacagcctgccccagcagggaaggttctactgactgcctggggccacagacaagcacagcctcctataaaatcagcccaggggaggccaagaaggcaactgctttcctgtggaggcaacacctacagagtgtgctgccatccctgccccagtccaccccaaaaggattaagatgctgcttttgcctggcacagtggctcacacctgtaatcctagcactttgggaggccaaggtgg >BF827241:1-448 (-) cagctccacaccttgaaagccgtgttgcctggaagtgggcttttgaagggagtcttgtcaccagggtgctctgtgctgnccgatgccacgagggtgctgagggtggccagggagactgctgctgacagcatcatgccccttccccgctgacctgccaggacccgtgcctgcttaccaatggaaagaggtaagacatcaccgccgctcccggcccccgcctgcccccgccgggaaggttctactgactgcctggggccacagaccagcacagcctcctataaaatcagccccggggaggcccagaaggccactgctttcctgtggaggccacacctacagagtgtgctgccatccctgcccccgtccacccccaaaggattaagatgctgcttttgcctggcaccgtggctcacacctgtaatcctagccctttgggaggcccaggtgg End editing Edited EST: BE302866, type: gc Aligns to: chr21:34793787-34793992 (++) All mismatches: cg (253), cg (270), ag (287), cg (300), cg (316), cg (321), cg (324), cg (329), cg (334), cg (336), cg (343), cg (355), cg (361), cg (365), cg (374), cg (383), cg (394), cg (402), cg (425), cg (434), Editing mismatches: 19, all mismatches: 20, alignment length: 206, cluster length: 182, total number of Cs: 54 Locations in RNA: 253 270 300 316 321 324 329 334 336 343 355 361 365 374 383 394 402 425 434 Locations in genome: 34793805 34793822 34793852 34793868 34793873 34793876 34793881 34793885 34793888 34793895 34793907 34793913 34793917 34793926 34793935 34793946 34793954 34793977 34793986 Upstream nucleotide (in genome): t t g t g g t t g t t t t t g t g t t Upstream nucleotide summary: a: 0, c: 0, g: 6, t: 13, other: 0 Downstream nucleotide (in genome): a c a a c c c a a c a a t g t c c a g Downstream nucleotide summary: a: 8, c: 7, g: 2, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 2, gc: 3, gg: 0, gt: 1, ta: 6, tc: 4, tg: 2, tt: 1, other: 0 >chr21:34793787-34793992 (+) caccgacagtaaatggttcacggccgacatcatgtccataggggtgaattgtacacagatcacagcaacagagtgtgacttcactgccgccagtccct-cagcaggcttcccaatggatttcaatgtcactctacgccttcgagctgagctgggagcactccattctgcctgggtgacaatgccttggtttcaacactatcggaatg >BE302866:235-440 (+) caccgacagtaaatggttgacggccgacatcatgtgcataggggtgaattgtgcacagatcacaggaacagagtgtgacttgactggcggcagtgcctgga-gaggcttgccaatggatttgaatgtgactgtacgccttggagctgaggtgggagcactgcattctggctgggtgacaatgccttggtttgaacactatgggaatg End editing Edited EST: BX462572, type: gc Aligns to: chr6:44217409-44217573 (++) All mismatches: gc (367), gc (371), gc (372), gc (374), gc (377), gc (388), gc (393), gc (394), gc (397), gc (401), gc (402), gc (404), gc (419), gc (427), gc (434), gc (436), gc (440), gc (442), gc (446), gc (448), Editing mismatches: 20, all mismatches: 20, alignment length: 165, cluster length: 82, total number of Gs: 28 Locations in RNA: 367 371 372 374 377 388 393 394 397 401 402 404 419 427 434 436 440 442 446 448 Locations in genome: 44217411 44217415 44217416 44217418 44217421 44217432 44217437 44217438 44217441 44217445 44217446 44217448 44217463 44217471 44217478 44217480 44217484 44217486 44217490 44217492 Upstream nucleotide (in genome): a t g t a t g g a t g t t t a a a t t t Upstream nucleotide summary: a: 6, c: 0, g: 4, t: 10, other: 0 Downstream nucleotide (in genome): g g t c a a g c t g t t c g a a t g t a Downstream nucleotide summary: a: 5, c: 3, g: 6, t: 6, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 1, at: 2, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 1, gg: 1, gt: 2, ta: 2, tc: 2, tg: 4, tt: 2, other: 0 >chr6:44217409-44217573 (+) caggctggtgcagacatctccatgattgggcagtttggtgttggcttttattctgcctacttggtggcagagaaagtggttgtgatcacaaagcacaacgatgatgaacagtatgcttgggagtcttctgctggaggttccttcactgtgcgtgctgaccatggt >BX462572:365-529 (+) cacsctcctccacacatctccatcattscccactttcctcttsscttttattctccctacttcstsscacacaaactcsttctcatcacaaagcacaacgatgatgaacagtatgcttgggagtcttctgctggaggttccttcactgtgcgtgctgaccatggt End editing Edited EST: BX457072, type: gc Aligns to: chr6:5502505-5503224 (++) All mismatches: cg (259), cg (263), cg (291), cg (299), cg (327), cg (330), cg (332), cg (356), cg (377), cg (379), cg (384), cg (387), cg (406), cg (416), cg (421), cg (434), cg (441), cg (443), gt (718), Editing mismatches: 18, all mismatches: 19, alignment length: 721, cluster length: 185, total number of Cs: 28 Locations in RNA: 259 263 291 299 327 330 332 356 377 379 384 387 406 416 421 434 441 443 Locations in genome: 5502763 5502767 5502795 5502803 5502831 5502834 5502836 5502860 5502881 5502883 5502888 5502891 5502910 5502920 5502925 5502938 5502945 5502947 Upstream nucleotide (in genome): c t a t g t a t a a g g t a t a a t Upstream nucleotide summary: a: 7, c: 1, g: 3, t: 7, other: 0 Downstream nucleotide (in genome): a a c t t a a a a a a a a t a a t t Downstream nucleotide summary: a: 12, c: 1, g: 0, t: 5, other: 0 Dinucleotide summary: aa: 4, ac: 1, ag: 0, at: 2, ca: 1, cc: 0, cg: 0, ct: 0, ga: 2, gc: 0, gg: 0, gt: 1, ta: 5, tc: 0, tg: 0, tt: 2, other: 0 >chr6:5502505-5503224 (+) ggcttagccattatgtgttagaacctatagatgcagagaatagtttggcatgccctttctgcaagggtttgtcacattttatagggtatacatctgaagttattcatttattttactttttggtaatttttaaaattatttttcaataaacccttttggtcgcaattactctctccccaaaagcaccttttaaggaaaaatggattactggatttgtcaagaaagttgatattgaacgtgtaacctgtcaatatttaccattcacataaaagtcagaacagtatcactgaccagatttctaaaagaaagaaatctattgaagaaggcttcacaatttttaaaattttaaacatttcaaagatgagcatgtaagaaacacaatgcagcatttttgcatattgttttcaaagaatgacttttcatttaggtgagacaagtaactctcaagataatttcattctttctggagttcaggttttctcgcacacatgtaaaaatgtaggtatagcttttaatatcttggctcagttagcaaaagagctttacaaacagttaagtgatcctgccaattttatatcacagccatctcatcagatacttcaaatagaaaatcagttaattcgaatttttttttgtttttttccatgtgattcatggg-ataagaggaatgcttttggaagttcattttgtcaaaggtaacacacctgattgtgcgtgtga >BX457072:1-721 (+) ggcttagccattatgtgttagaacctatagatgcagagaatagtttggcatgccctttctgcaagggtttgtcacattttatagggtatacatctgaagttattcatttattttactttttggtaatttttaaaattatttttcaataaacccttttggtcgcaattactctctccccaaaagcaccttttaaggaaaaatggattactggatttgtcaagaaagttgatattgaacgtgtaasstgtcaatatttasgattgasataaaagtsagaasagtatsastgagsagatttgtaaaagaaagaaatstattgaagaagggttgagaatttttaarattttaaasatttgaaagatgagsatgtaagaragagaatggaggatttttgsatattgttttgaaagaatgagttttgatttaggtgagagaagtaagtgtsaagataatttsattstttstggagttsaggttttstsgsasasatgtaaaaatgtaggtatagcttttaatatcttggctcagttagcaaaagagctttacaaacagttaagtgatcctgccaattttatatcacagccatctcatcagatacttcaaatagaaaatcagttaattcgaatttttttttgtttttttccatgtgattcatggggataagaggaatgcttttggaagttcattttgtcaaaggtaacacacctgattgtgcgtttga End editing Edited EST: AL534874, type: gc Aligns to: chr16:90001668-90002430 (+-) All mismatches: gc (5), gc (8), gc (12), gc (13), gc (19), gc (22), gc (30), gc (36), tc (40), gc (42), gc (45), gc (51), gc (56), gc (96), gc (99), gc (107), gc (108), gc (109), gc (115), gc (126), gc (134), gc (137), gc (140), tc (141), gc (148), gc (151), gc (168), gc (172), gc (175), gc (178), gc (180), gc (181), gc (182), gc (185), gc (188), gc (189), gc (191), gc (192), gc (195), gc (196), gc (198), gc (200), gc (204), gc (205), gc (208), gc (211), gc (215), gc (218), gc (221), gc (223), gc (230), gc (231), gc (237), ga (268), gc (272), ga (276), gc (291), gc (294), gc (295), gc (301), gc (304), gc (310), gc (312), gc (316), gc (324), gc (335), gc (339), gc (342), gc (345), gc (352), gc (355), gc (358), gc (360), gc (363), gc (364), gc (368), gc (369), gc (396), gc (397), gc (401), gc (404), gc (414), gc (415), gc (434), gc (484), ga (487), gc (494), gc (495), gc (497), gc (502), gc (510), gc (512), gc (514), gc (516), gc (519), gc (520), gc (522), gc (523), gc (526), gc (528), gc (541), gc (542), gc (547), gc (549), gc (557), gc (560), gc (565), gc (569), Editing mismatches: 103, all mismatches: 108, alignment length: 763, cluster length: 564, total number of Gs: 173 Locations in RNA: 5 8 12 13 19 22 30 36 42 45 51 56 96 99 107 108 109 115 126 134 137 140 148 151 168 172 175 178 180 181 182 185 188 189 191 192 195 196 198 200 204 205 208 211 215 218 221 223 230 231 237 272 291 294 295 301 304 310 312 316 324 335 339 342 345 352 355 358 360 363 364 368 369 396 397 401 404 414 415 434 484 494 495 497 502 510 512 514 516 519 520 522 523 526 528 541 542 547 549 557 560 565 569 Locations in genome: 90002426 90002423 90002419 90002418 90002412 90002409 90002401 90002395 90002389 90002386 90002380 90002375 90002335 90002332 90002324 90002323 90002322 90002316 90002305 90002297 90002294 90002291 90002283 90002280 90002263 90002259 90002256 90002253 90002252 90002251 90002250 90002247 90002244 90002243 90002241 90002240 90002237 90002236 90002234 90002232 90002228 90002227 90002224 90002221 90002217 90002214 90002211 90002209 90002202 90002201 90002195 90002160 90002141 90002138 90002137 90002131 90002128 90002122 90002120 90002116 90002108 90002097 90002093 90002090 90002087 90002080 90002077 90002074 90002072 90002069 90002068 90002064 90002063 90002036 90002035 90002031 90002028 90002018 90002017 90001998 90001948 90001938 90001937 90001935 90001930 90001922 90001920 90001918 90001916 90001913 90001912 90001910 90001909 90001906 90001904 90001891 90001890 90001885 90001883 90001875 90001872 90001867 90001863 Upstream nucleotide (in genome): c t g a a t t t t a c g c t g g a c t c t t a c a a c g g g c g g t g a g a a t g t a c t a t a g g g g c g a a a a c t c a c g c a t a c g t g g g a c c g c c t g c c c t t t c g t g a t c g t t c a a a a Upstream nucleotide summary: a: 26, c: 25, g: 27, t: 25, other: 0 Downstream nucleotide (in genome): t a c g c c t t c c t c c c c g g c c a c c c g c c a c g g g c c g t g c g a a a g c c c c a t c g c c c a g t c t a t a c a c a t g a a a g c g c g c g c g c t c g c c a t t t c g t g a t a g g t c c a c Downstream nucleotide summary: a: 19, c: 43, g: 24, t: 17, other: 0 Dinucleotide summary: aa: 3, ac: 12, ag: 7, at: 4, ca: 7, cc: 8, cg: 5, ct: 5, ga: 4, gc: 16, gg: 5, gt: 2, ta: 5, tc: 7, tg: 7, tt: 6, other: 0 >chr16:90001668-90002430 (+) tcgcccccctcacagcccggggcagccagcagtaccgggccctgaccgtgcccgagctcacccagcagatgttcgatgccaagaacatgatggccgcctgcgacccgcgccacggccgctacctgacggtggccaccgtgttccggggccgcatgtccatgaaggaggtggacgagcagatgctggccatccagagcaagaacagcagctacttcgtggagtggatccccaacaacgtgaaggtggccgtgtgtgacatcccgccccgcggcctcaagatgtcctccaccttcatcgggaacagcacggccatccaggagctgttcaagcgcatctccgagcagttcacggccatgttccggcgcaaggccttcctgcactggtacacgggcgagggcatggacgagatggagttcaccgaggccgagagcaacatgaacgacctggtgtccgagtaccagcagtaccaggacgccacggccgaggaagagggcgagatgtacgaagacgacgaggaggagtcggaggcccagggccccaagtgaagctgctcgcagctggagtgagaggcaggtggcggccggg-gccgaagccagcagtgtctaaacccccggagccatcttgctgccgacaccctgctttcccctcgccctagggctcccttgccgccctcctgcagtatttatggcctcgtcctccccacctaggccacgtgtgagctgctcctgtctctgtcttattgcagctccaggcctgacgtttt >AL534874:1-763 (-) tcgcccccctcacagcccggggcagccagcagtaccgggccctgaccgtgcccgagctcacccagcagatgttcgatgccaagaacatgatggccgcctgcgacccgcgccacggccgcta-ctgacggtggccaccgtgttccggggccgcatgtccatgaaggaggtggacgagcagatgctggccatccagaccaacaacaccacctacttcctcgagtccatccccaacaacctcaacctccccctctctcacatccccccccccccccycaaaatcycctccaccttcatcgggaacagcacggccatccaggagctgttcaagcccatctccsagcagttcacccccatgttcccgcccaaccccttcctgcactggtacacgsgcgagcccatccaccacatcsacttcacccasccccasaccaacatsaaccacctsgtcycccactaccaccactaccaccaccccacggccgaggaaaaggccgaaatgtacsaasacsacsassassastcssasccccasccccccaactcaacctcctcccacctccagtcacacccacctcccgccccccsccccaacccaccagtgtctaaaccccccsacccatctccctccccacaccctcctttcccctccccctaccccycccttccccccctcctgcagtatttatggcctcgtcctccccacctascccacctgtsacctccccctctctctctcttattccacctccacccctcacctttt End editing Edited EST: DW435562, type: at Aligns to: chr11:65266516-65266753 (++) All mismatches: ta (90), ta (91), ta (92), ta (94), ta (95), ta (100), ga (146), ta (170), ta (176), ta (177), ta (188), ta (203), ta (204), ta (205), Editing mismatches: 13, all mismatches: 14, alignment length: 238, cluster length: 116, total number of Ts: 48 Locations in RNA: 90 91 92 94 95 100 170 176 177 188 203 204 205 Locations in genome: 65266588 65266589 65266590 65266592 65266593 65266598 65266668 65266674 65266675 65266686 65266701 65266702 65266703 Upstream nucleotide (in genome): t t t t t t t t t t t t t Upstream nucleotide summary: a: 0, c: 0, g: 0, t: 13, other: 0 Downstream nucleotide (in genome): t t t t c t a t t t t t a Downstream nucleotide summary: a: 2, c: 1, g: 0, t: 10, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 0, tt: 10, other: 0 >chr11:65266516-65266753 (+) aggcattgaggcagccagcgcaggggcttctgctgagggggcaggcggagcttgaggaaaccgcagataagtttttttctctttgaaagatagagattaatacaactacttaaaaaatatagtcaataggttactaagatattgcttagcgttaagtttttaacgtaattttaatagcttaagattttaagagaaaatatgaagacttagaagagtagcatgaggaaggaaaagataa >DW435562:18-255 (+) aggcattgaggcagccagcgcaggggcttctgctgagggggcaggcggagcttgaggaaaccgcagataagtaaataactctatgaaagatagagattaatacaactacttaaaaaatatagtcaataagttactaagatattgcttagcgtaaagttaataacgtaattataatagcttaagataaaaagagaaaatatgaagacttagaagagtagcatgaggaaggaaaagataa End editing Edited EST: BU960363, type: at Aligns to: chr14:89079657-89079871 (++) All mismatches: ta (200), ta (201), ta (202), ta (203), ta (204), ta (205), ta (206), ta (207), ta (208), ta (210), ta (211), ta (212), Editing mismatches: 12, all mismatches: 12, alignment length: 212, cluster length: 16, total number of Ts: 12 Locations in RNA: 200 201 202 203 204 205 206 207 208 210 211 212 Locations in genome: 89079854 89079855 89079857 89079858 89079859 89079860 89079861 89079862 89079865 89079867 89079868 89079869 Upstream nucleotide (in genome): a t g t t t t t c a t t Upstream nucleotide summary: a: 2, c: 1, g: 1, t: 8, other: 0 Downstream nucleotide (in genome): t g t t t t t g a t t a Downstream nucleotide summary: a: 2, c: 0, g: 2, t: 8, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 2, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 0, tg: 2, tt: 5, other: 0 >chr14:89079657-89079871 (+) ttccagtgttgagatgctttgcatctctgcagaagaaatttattttaaattgtttaaatatctggaaatacttttagctatcatttataaagatagttttgttctcagtttcactataaattatagaacaaatgggaaacaagggtttaatttagttcagccattttacaaggaaataataaaatactaaaatctgattgttttttgctatttaa >BU960363:3-214 (+) ttccagtgttgagatgctttgcatctctgcagaagaaatttattttaaattgtttaaatatctggaaatacttttagctatcatttataaagatagttttgttctcagtttcactataaattatagaacaaatgggaaacaagggtttaatttagttcagccattttacaaggaaataataaaatactaaaatctgaaa-aaaaaa--aaaaaaa End editing Edited EST: BX378503, type: at Aligns to: chr14:101200672-101201476 (++) All mismatches: ta (8), ta (9), ta (12), ta (23), ta (36), ta (80), ta (95), ta (100), ta (106), ta (108), ta (112), ta (125), ta (132), ta (134), ta (139), ta (141), ta (143), ta (158), ta (173), ta (180), ta (182), ta (193), ta (200), ta (205), ta (212), ta (219), ta (233), ta (239), ta (260), ta (263), ta (269), ta (300), ta (302), ta (323), ta (328), ta (335), ta (378), ta (380), ta (383), ta (389), ca (404), ta (424), ta (437), ta (458), ga (796), ga (798), ta (802), Editing mismatches: 44, all mismatches: 47, alignment length: 804, cluster length: 796, total number of Ts: 168 Locations in RNA: 8 9 12 23 36 80 95 100 106 108 112 125 132 134 139 141 143 158 173 180 182 193 200 205 212 219 233 239 260 263 269 300 302 323 328 335 378 380 383 389 424 437 458 802 Locations in genome: 101200679 101200680 101200683 101200694 101200707 101200752 101200767 101200772 101200778 101200780 101200784 101200797 101200804 101200806 101200811 101200813 101200815 101200830 101200845 101200852 101200854 101200865 101200872 101200877 101200884 101200891 101200905 101200911 101200932 101200935 101200941 101200972 101200974 101200995 101201000 101201007 101201050 101201052 101201055 101201061 101201096 101201109 101201130 101201474 Upstream nucleotide (in genome): c t a c g c g c g g g t g c c g g c g g c c c c c c c g a c g c c a c a g a g c c c c a Upstream nucleotide summary: a: 6, c: 22, g: 14, t: 2, other: 0 Downstream nucleotide (in genome): t c c g g g g a g c g c c c g g c g c c g a g a g g g g c g g c c c t c a c c c a g g a Downstream nucleotide summary: a: 6, c: 17, g: 19, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 5, ag: 0, at: 0, ca: 4, cc: 4, cg: 12, ct: 2, ga: 1, gc: 6, gg: 7, gt: 0, ta: 0, tc: 2, tg: 0, tt: 0, other: 0 >chr14:101200672-101201476 (+) agccggcttcatcgacaagacctgcagccgcccggtgaccaactgcgccagcagc-ccgtgccagaacgggggcacctgcctgcagcacacccaggtgagctacgagtgtctgtgcaagcccgagttcacaggtctcacctgtgtcaagaagcgcgcgctgagcccccagcaggtcacccgtctgcccagcggctatgggctggcctaccgcctgacccctggggtgcacgagctgccggtgcagcagccggagcaccgcatcctgaaggtgtccatgaaagagctcaacaagaaaacccctctcctcaccgagggccaggccatctgcttcaccatcctgggcgtgctcaccagcctggtggtgctgggcactgtgggtatcgtcttcctcaacaagtgcgagacctgggtgtccaacctgcgctacaaccacatgctgcggaagaagaagaacctgctgcttcagtacaacagcggggaggacctggccgtcaacatcatcttccccgagaagatcgacatgaccaccttcagcaaggaggccggcgacgaggagatctaagcagcgttcccacagccccctctagattcttggagttccgcagagcttactatacgcggtctgtcctaatctttgtggtgttcgctatctcttgtgtcaaatctggtgaacgctacgcttacatatattgtctttgtgctgctgtgtgacaaacgcaatgcaaaaacaatcctctttctctctcttaatgcatgatacagaataataataagaatttcatctttaaatgagtaagagaaataa >BX378503:1-804 (+) agccggcaacaacgacaagaccagcagccgcccggagaccaactgcgcca-ca-caccgtgccagaacgggggcacctgccagcagcacacccaggagagcaacgagagactgagcaagcccgagtacacaggacacaccagagacaaraagcgcgcgcagagcccccagcaggacacccgacagcccagcggcaatgggcaggccaaccgccagamcccaggggtgcacgagcagccggagcagcagccggagcaccgcaaccagaaggagtccatgaaagagctcaacaagaaaaccccacacctcaccgagggccaggccaactgcatcaccaacctgggcgtgctcaccagcctggtggtgctgggcactgtgggaaacgacttccacaacaagtgcgagaactgggtgtccaacctgcgcaacaaccacatgcagcggaagaagaagaacctgcagcttcagtacaacagcggggaggacctggccgtcaacatcatcttccccgagaagatcgacatgaccaccttcagcaaggaggccggcgacgaggagatctaagcagcgttcccacagccccctctagattcttggagttccgcagagcttactatacgcggtctgtcctaatctttgtggtgttcgctatctcttgtgtcaaatctggtgaacgctacgcttacatatattgtctttgtgctgctgtgtgacaaacgcaatgcaaaaacaatcctctttctctctcttaatgcatgatacagaataataataagaatttcatctttaaatgagtaaaaaaaaaaa End editing Edited EST: CD238594, type: at Aligns to: chr17:2588731-2588945 (++) All mismatches: ta (182), ga (183), ta (184), gt (185), ta (187), ta (188), ta (189), ta (190), ta (191), ta (192), ta (193), ta (194), ta (195), ta (196), ta (197), ta (198), ta (199), ta (200), ta (201), ta (202), ta (203), ta (204), ta (205), ta (206), ta (207), ta (208), ta (209), ta (210), ta (211), ta (212), ta (213), ta (214), ta (215), Editing mismatches: 31, all mismatches: 33, alignment length: 215, cluster length: 34, total number of Ts: 31 Locations in RNA: 182 184 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 Locations in genome: 2588912 2588914 2588917 2588918 2588919 2588920 2588921 2588922 2588923 2588924 2588925 2588926 2588927 2588928 2588929 2588930 2588931 2588932 2588933 2588934 2588935 2588936 2588937 2588938 2588939 2588940 2588941 2588942 2588943 2588944 2588945 Upstream nucleotide (in genome): a g a t t t t t t t t t t t t t t t t t t t t t t t t t t t t Upstream nucleotide summary: a: 2, c: 0, g: 1, t: 28, other: 0 Downstream nucleotide (in genome): g g t t t t t t t t t t t t t t t t t t t t t t t t t t t t n Downstream nucleotide summary: a: 0, c: 0, g: 2, t: 28, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 27, other: 1 >chr17:2588731-2588945 (+) actgaagatattgacacaattttaaaaaatcagtaaaggaatgtatataatattgctctcgtgttttacagtaagatttgttgctctcagactgtgtaaaacaaaatttattcatgttttctgcatattaaaaaatcttattgtaccaactggtaaactattaaatgcctataaaactagatgtgattttttttttttttttttttttttttttt >CD238594:1-215 (+) actgaagatattgacacaattttaaaaaatcagtaaaggaatgtatataatattgctctcgtgttttacagtaagatttgttgctctcagactgtgtaaaacaaaatttattcatgttttctgcatattaaaaaatcttattgtaccaactggtaaactattaaatgcctataaaactagaaaataaaaaaaaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: AW993699, type: at Aligns to: chr1:246923259-246923376 (++) All mismatches: ac (283), ta (286), ta (307), ta (310), ta (315), ta (321), ta (322), ta (332), ta (333), ta (336), ta (339), ta (342), ta (345), ta (355), ta (356), ta (362), Editing mismatches: 15, all mismatches: 16, alignment length: 119, cluster length: 76, total number of Ts: 34 Locations in RNA: 286 307 310 315 321 322 332 333 336 339 342 345 355 356 362 Locations in genome: 246923282 246923303 246923306 246923311 246923317 246923318 246923328 246923329 246923332 246923335 246923338 246923341 246923350 246923351 246923357 Upstream nucleotide (in genome): c t t c t t t t t t t t t t t Upstream nucleotide summary: a: 0, c: 2, g: 0, t: 13, other: 0 Downstream nucleotide (in genome): g a a g t g t c t g c t t g g Downstream nucleotide summary: a: 2, c: 2, g: 6, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 2, tg: 4, tt: 5, other: 0 >chr1:246923259-246923376 (+) gttcagtatgctgcgtatgtaactgtgggaggcatcacctctgttattaagctgatgtttgcaggacttttctttttgttcttt-gtgaggtttggaattggaaggcaacttctcataa >AW993699:263-381 (+) gttcagtatgctgcgtatgtcacagtgggaggcatcacctctgtaataaagcagatgtaagcaggacttaactattagtactattgtgaggtaaggaataggaaggcaacttctcataa End editing Edited EST: CB987739, type: at Aligns to: chr3:183891112-183891423 (++) All mismatches: ta (291), ta (292), ta (294), ta (295), ta (296), ta (297), ta (299), ca (300), ta (302), ta (303), ta (305), ta (306), ta (308), ta (309), ta (311), ta (312), ta (313), Editing mismatches: 16, all mismatches: 17, alignment length: 312, cluster length: 23, total number of Ts: 16 Locations in RNA: 291 292 294 295 296 297 299 302 303 305 306 308 309 311 312 313 Locations in genome: 183891400 183891401 183891403 183891404 183891405 183891406 183891408 183891411 183891412 183891414 183891415 183891417 183891418 183891420 183891421 183891422 Upstream nucleotide (in genome): a t a t t t a a t a t a t a t t Upstream nucleotide summary: a: 7, c: 0, g: 0, t: 9, other: 0 Downstream nucleotide (in genome): t a t t t a c t a t a t a t t a Downstream nucleotide summary: a: 6, c: 1, g: 0, t: 9, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 6, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 6, tc: 0, tg: 0, tt: 3, other: 0 >chr3:183891112-183891423 (+) gtcttgaatttggccctccctctcccctctctactttaattcattggagcatgggatttggagttaggtggttttgggtttgaattccagctctactatttttggttgtgtgatagagttatttaacctctctgagcctcagttccctcgtatgtaaaatgatgataataatacctacctcacagggttgttgtgaggatttaaattagatattgtacgaaaagtgcctagcacagtgcctggcacacagtagagtaggtgctcaataaatggtagctattattattattattttatcattattattattta >CB987739:3-314 (+) gtcttgaatttggccctccctctcccctctctactttaattcattggagcatgggatttggagttaggtggttttgggtttgaattccagctctactatttttggttgtgtgatagagttatttaacctctctgagcctcagttccctcgtatgtaaaatgatgataataatacctacctcacagggttgttgtgaggatttaaattagatattgtacgaaaagtgcctagcacagtgcctggcacacagtagagtaggtgctcaataaatggtagctattattattaaaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: AL579558, type: at Aligns to: chr6:74227751-74227989 (++) All mismatches: at (379), at (402), at (434), at (451), at (459), at (468), at (505), at (509), at (521), at (526), at (537), at (541), at (542), at (547), at (598), at (608), Editing mismatches: 16, all mismatches: 16, alignment length: 239, cluster length: 230, total number of As: 63 Locations in RNA: 379 402 434 451 459 468 505 509 521 526 537 541 542 547 598 608 Locations in genome: 74227751 74227774 74227806 74227823 74227831 74227840 74227877 74227881 74227893 74227898 74227909 74227913 74227914 74227919 74227970 74227980 Upstream nucleotide (in genome): n a c c g a g a c c c c a g g g Upstream nucleotide summary: a: 4, c: 6, g: 5, t: 0, other: 1 Downstream nucleotide (in genome): c g t t c t t t g g t a t g t t Downstream nucleotide summary: a: 1, c: 2, g: 4, t: 9, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 3, ca: 1, cc: 0, cg: 2, ct: 3, ga: 0, gc: 1, gg: 1, gt: 3, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr6:74227751-74227989 (+) acccaaaggtggatagtctgagaagctctcaacacacatgggcttgccaggaaccatatcaacaatggcagcatcaccagacttcaagaatttagggccatcttccagctttttaccagaacggcgatcaatcttttccttcagctcagcaaacttgcatgcaatgtgagccgtgtggcaatccaatacaggggcatagccggcgcttatttggcctggatggttcaggataatcacct >AL579558:379-617 (+) tcccaaaggtggwtaktctgagatgctctcaacacacatgggcttgccaggdaccttatcaacaatggcagcttcaccagtcttcaagattttwgggccwtcttccagctttttwccagaacggcgttcattcttttccttctgctctgcaaayttgcttgctttgtgtkcygtgtggcaatccaatacaggggcatagccggcgcttatttggcctggttggttcaggttaatcacct End editing Edited EST: BI259611, type: at Aligns to: chr9:135896380-135896592 (++) All mismatches: gt (144), ta (183), ta (186), ta (189), ta (193), ta (196), ta (199), ta (202), ta (205), ta (208), ta (210), ta (211), ta (212), ta (213), Editing mismatches: 13, all mismatches: 14, alignment length: 213, cluster length: 30, total number of Ts: 13 Locations in RNA: 183 186 189 193 196 199 202 205 208 210 211 212 213 Locations in genome: 135896563 135896566 135896569 135896572 135896575 135896578 135896581 135896584 135896587 135896589 135896590 135896591 135896592 Upstream nucleotide (in genome): a a a a a a a a a a t t t Upstream nucleotide summary: a: 10, c: 0, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): a a a a a a a a a t t t n Downstream nucleotide summary: a: 9, c: 0, g: 0, t: 3, other: 1 Dinucleotide summary: aa: 9, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 2, other: 1 >chr9:135896380-135896592 (+) tgcatcgtaaaaccttcagaaggaaaggagaatgttttgtggaccactttggttttcttttttgcgtgtggcagttttaagttattagtttttaaaatcagtactttttaatggaaacaacttgaccaaaaatttgtcacagaagtttgagacccattaaaaaagttaaatgagaaaaaaaaataataata-ataataataataataatatttt >BI259611:1-213 (+) tgcatcgtaaaaccttcagaaggaaaggagaatgttntgtggaccactttggttttcttttttgcgtgtggcagttttaagttattagtttttaaaatcagtactttttaatggaaacaact-gaccaaaaatttgtcacagaattttgagacccattaaaaaagttaaatgagaaaaaaaaaaaaaaaaagaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: BU934837, type: at Aligns to: chrX:77381618-77381783 (++) All mismatches: ta (156), ta (157), ta (158), ta (159), ta (160), ta (161), ta (162), ta (163), ta (164), ta (165), ta (166), ta (167), ta (168), Editing mismatches: 13, all mismatches: 13, alignment length: 166, cluster length: 13, total number of Ts: 13 Locations in RNA: 156 157 158 159 160 161 162 163 164 165 166 167 168 Locations in genome: 77381771 77381772 77381773 77381774 77381775 77381776 77381777 77381778 77381779 77381780 77381781 77381782 77381783 Upstream nucleotide (in genome): a t t t t t t t t t t t t Upstream nucleotide summary: a: 1, c: 0, g: 0, t: 12, other: 0 Downstream nucleotide (in genome): t t t t t t t t t t t t n Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 12, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 11, other: 1 >chrX:77381618-77381783 (+) tagcttagttctcttttgatgtaggttattatgattagctttgtcactgtttcactactcagcatggaaacaagatgaaattccatttgtaggtagtgagacaaaattgatgatccattaagtaaacaataaaagtgtccattgaaaccgtgattttttttttttt >BU934837:3-168 (+) tagcttagttctcttttgatgtaggttattatgattagctttgtcactgtttcactactcagcatggaaacaagatgaaattccatttgtaggtagtgagacaaaattgatgatccattaagtaaacaataaaagtgtccattgaaaccgtgaaaaaaaaaaaaaa End editing Edited EST: BE932587, type: at Aligns to: chrX:13727050-13727297 (++) All mismatches: at (12), at (17), at (20), at (24), at (37), at (42), at (52), at (62), cg (77), at (82), at (98), at (99), at (100), tc (104), at (109), at (114), at (115), at (125), at (131), at (154), at (155), at (156), at (164), at (166), at (193), at (194), at (196), at (202), at (204), at (205), at (209), at (215), at (225), at (227), at (228), at (230), at (236), at (247), Editing mismatches: 36, all mismatches: 38, alignment length: 248, cluster length: 236, total number of As: 70 Locations in RNA: 12 17 20 24 37 42 52 62 82 98 99 100 109 114 115 125 131 154 155 156 164 166 193 194 196 202 204 205 209 215 225 227 228 230 236 247 Locations in genome: 13727057 13727062 13727065 13727069 13727082 13727087 13727097 13727107 13727127 13727143 13727144 13727145 13727154 13727159 13727160 13727170 13727176 13727199 13727200 13727201 13727209 13727211 13727238 13727239 13727241 13727247 13727249 13727250 13727254 13727260 13727270 13727272 13727273 13727275 13727281 13727292 Upstream nucleotide (in genome): c c g g g c c g t c a a g t a a g g a a g g c a g c t a g c c g a g c c Upstream nucleotide summary: a: 9, c: 11, g: 13, t: 3, other: 0 Downstream nucleotide (in genome): g g g t g c g c g a a g a a g g a a a g g g a g t t a g a g g a g a a g Downstream nucleotide summary: a: 13, c: 2, g: 18, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 7, at: 0, ca: 3, cc: 1, cg: 6, ct: 1, ga: 6, gc: 1, gg: 4, gt: 2, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chrX:13727050-13727297 (+) acacggcaggtcaggagcgattccgaagcctgaggacaccattttacagaggttctgactgctgcctgcttacttttagtgtcgatgattcacaaagcttccagaacttaagtaactggaagaaagaattcatatattatgcagatgtgaaagagcctgagagctttccttttgtgattctgggtaacaagattgacataagcgaacggcaggtgtctacagaagaagcccaagcttggtgcagggac >BE932587:5-252 (+) acacggctggtctggtgcgtttccgaagcctgtggactccattttactgaggttctgtctgctgcctgcttagtttttgtgtcgatgattcactttgctcccagtacttttgtaactggatgaaagtattcatatattatgcagatgtgtttgagcctgtgtgctttccttttgtgattctgggtaacttgtttgacttttgcgtacggctggtgtctactgttgtagccctagcttggtgctgggac End editing Edited EST: BF733550, type: at Aligns to: chr12:118582519-118582776 (+-) All mismatches: at (1), ta (5), ta (15), ta (18), ta (21), ta (22), ta (23), ta (28), ta (34), ta (35), ta (38), ta (46), ta (53), ta (60), ta (69), ta (70), ta (78), ta (82), ta (87), ta (90), ta (107), ta (109), ta (113), ta (114), ta (121), ta (140), ta (145), ta (150), ta (158), ta (159), ta (164), ta (178), ta (182), ta (192), ta (194), ta (203), ta (207), ta (211), ta (228), ta (229), ta (231), ca (239), Editing mismatches: 40, all mismatches: 42, alignment length: 258, cluster length: 227, total number of Ts: 62 Locations in RNA: 5 15 18 21 22 23 28 34 35 38 46 53 60 69 70 78 82 87 90 107 109 113 114 121 140 145 150 158 159 164 178 182 192 194 203 207 211 228 229 231 Locations in genome: 118582772 118582762 118582759 118582756 118582755 118582754 118582749 118582743 118582742 118582739 118582731 118582724 118582717 118582708 118582707 118582699 118582695 118582690 118582687 118582670 118582668 118582664 118582663 118582656 118582637 118582632 118582627 118582619 118582618 118582613 118582599 118582595 118582585 118582583 118582574 118582570 118582566 118582549 118582548 118582546 Upstream nucleotide (in genome): t c c t t t g t g g g c g t c c c c t g g t g t c c c t c g c c g c g c a t g g Upstream nucleotide summary: a: 1, c: 15, g: 13, t: 11, other: 0 Downstream nucleotide (in genome): t g g c t t g g t a c g g g t g t c t t g c t c g g g g t t g g a g g a g a t g Downstream nucleotide summary: a: 4, c: 5, g: 19, t: 12, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 1, cc: 1, cg: 10, ct: 3, ga: 2, gc: 1, gg: 5, gt: 5, ta: 1, tc: 3, tg: 3, tt: 4, other: 0 >chr12:118582519-118582776 (+) gagctcagggccccggtggctggcacgtgttaccaggccgagtgggatgactatgtgcccaaactgtacgagcagctgtctgggaagtagggggttagcttggggacctgaactgtcctggaggccccaagccatgttccccagttcagtgttgcatgtataatagatttctcctcttcctgccccccttggcatgggtgagacctgaccagtcagatggtagttgagggtgacttttcctgctgcctggcctttata >BF733550:1-258 (-) gagctcagggccccggtggatggcacgagaaaccaggccgagtgggaagacaatgagcccaaacagaacgagcagcagtcagggaagtagggggatagcaaggggaccagaacagtccaggaggccccaagccatgtaccccagaacagagatgcatgtataatagatatcacctcatccagccccccaaggcatgggagagaccagaccagacagatggaagaagagggagactaaaccagcagcctggcctatatt End editing Edited EST: BF733566, type: at Aligns to: chr12:124498634-124498958 (+-) All mismatches: ta (4), ta (23), ta (24), ta (28), ta (40), ta (64), ta (74), ta (75), ta (80), ta (98), ta (99), ta (100), ta (104), ta (107), ta (119), ta (121), ta (124), ta (141), ta (145), ta (168), ta (173), ta (174), ta (176), ta (181), ta (188), ta (189), ta (190), ta (201), ta (204), ta (207), ta (212), ta (217), ta (222), ta (228), ta (238), ta (241), ta (245), ta (294), Editing mismatches: 38, all mismatches: 38, alignment length: 325, cluster length: 291, total number of Ts: 70 Locations in RNA: 4 23 24 28 40 64 74 75 80 98 99 100 104 107 119 121 124 141 145 168 173 174 176 181 188 189 190 201 204 207 212 217 222 228 238 241 245 294 Locations in genome: 124498955 124498936 124498935 124498931 124498919 124498895 124498885 124498884 124498879 124498861 124498860 124498859 124498855 124498852 124498840 124498838 124498835 124498818 124498814 124498791 124498786 124498785 124498783 124498778 124498771 124498770 124498769 124498758 124498755 124498752 124498747 124498742 124498737 124498731 124498721 124498718 124498714 124498665 Upstream nucleotide (in genome): t t c c g g t a c t t g g c c c c c g c t g a g t t c g g c a g g g g g t t Upstream nucleotide summary: a: 3, c: 11, g: 14, t: 10, other: 0 Downstream nucleotide (in genome): t t t g g g c t g a t t g g g c g g c g g t g g c t t c g a t g g g g g t t Downstream nucleotide summary: a: 2, c: 5, g: 19, t: 12, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 2, ca: 1, cc: 1, cg: 7, ct: 2, ga: 0, gc: 2, gg: 10, gt: 2, ta: 1, tc: 2, tg: 1, tt: 6, other: 0 >chr12:124498634-124498958 (+) agatgataagtaaacaaataaataatgtagtttgagatagtgattaagtgctatgaagaaaataaactagggtgatgattttagtggtggggtggggtgggggtggggtgacattagctagtggtcagggaggcctttccgcggtgggatgttgagctgaggccggaggagaagtagcagtcgctggcagagcacacaggctgctctgggggatgagctggtgcgtttaaggaacaggccagcactggcattcgcaagcagtggggaaggggagagatgccgaggtggtcagtatcctgactttcagaggcctttttttgtttgt >BF733566:1-325 (-) agatgataagtaaacaaataaataatgtagtatgagatagtgattaagtgctatgaagaaaataaactagggtgatgattatagaggaggggtggggagggggaggggagacaatagcaagaggacagggaggccaaaccgcggagggaagaagagcagaggccggaggagaagtagcagacgcaggcagagcacacaggcagcacagggggatgagcaggagcgaaaaaggaacaggccagcacaggcaaacgcaagcagaggggaaggggagagatgccgaggaggtcagtatccagacaatcagaggcctttttttgtatgt End editing Edited EST: DW416257, type: at Aligns to: chr15:85242523-85242698 (+-) All mismatches: at (63), at (128), at (130), at (135), at (138), at (152), at (153), at (154), at (156), at (158), at (160), at (161), at (162), at (165), at (166), at (167), ga (188), Editing mismatches: 16, all mismatches: 17, alignment length: 178, cluster length: 105, total number of As: 59 Locations in RNA: 63 128 130 135 138 152 153 154 156 158 160 161 162 165 166 167 Locations in genome: 85242652 85242587 85242585 85242580 85242577 85242563 85242562 85242561 85242559 85242557 85242555 85242554 85242553 85242550 85242549 85242548 Upstream nucleotide (in genome): a a c a a a a a a a a a a a a c Upstream nucleotide summary: a: 14, c: 2, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a a a a a a a a a a a a Downstream nucleotide summary: a: 16, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 14, ac: 0, ag: 0, at: 0, ca: 2, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr15:85242523-85242698 (+) gcaacagagcaagactcttgtctcc--aaaaaaaaaaaaaaaaaaaccaggaaacaaaaaaaacaaaatatgctgttctagccaaaatgagttaaagagaccaaatttaccttcctgcctgaaataactaaaacactggacaaaatatatgaaacaagggttttcggacattggctat >DW416257:17-194 (-) gcaacaaagcaagactcttgtctcctttttaatttatatatttaaaccaggaaacataataaactatatatgctgttctagccaaaatgagttaaagagaccaaatttaccttcctgcctgaaataactaatacactggacaaaatatatgaaacaagggttttcggacattggctat End editing Edited EST: DB311508, type: at Aligns to: chr4:26771336-26771619 (+-) All mismatches: ta (269), ta (270), ta (271), ta (273), ta (274), ta (275), ta (277), ta (280), ta (282), ta (283), ta (284), ta (285), Editing mismatches: 12, all mismatches: 12, alignment length: 285, cluster length: 15, total number of Ts: 13 Locations in RNA: 269 270 271 273 274 275 277 280 282 283 284 285 Locations in genome: 26771350 26771349 26771348 26771346 26771345 26771344 26771343 26771341 26771339 26771338 26771337 26771336 Upstream nucleotide (in genome): t t t t t t a g t t t n Upstream nucleotide summary: a: 1, c: 0, g: 1, t: 9, other: 1 Downstream nucleotide (in genome): g t t t t t t a g t t t Downstream nucleotide summary: a: 1, c: 0, g: 2, t: 9, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 2, tt: 7, other: 1 >chr4:26771336-26771619 (+) ttttgta-t-tttttttgcagagactgtgtttcaccatgttgcccaggctggtctcgaacttctgagctcaagcaatccaccctcctcagcctccagaagtgctgggattacaggcatgagacaccaagtccagccataaggttcttattctatatatacatgaaatgatatcacttgaaggtagactgtgataagttaaatacg-tatattttttaaatcttcaaacaaccactaaaataaaagaacaaagagttacaactaataaaggagatagaatggaatcat >DB311508:1-285 (-) aaaagaagagaaataaa--agagactgtgtttcaccatgttgcccaggctggtctcgaacttctgagctcaagcaatccaccctcctcagcctccagaagtgctgggattacaggcatgagacaccaagtccagccataaggttcttattctatatatacatgaaatgatatcacttgaaggtagactgtgataagttaaatacggtatattttttaaatcttcaaacaaccactaaaataaaagaacaaagagttacaactaataaaggagatagaatggaatcat End editing Edited EST: CV426378, type: at Aligns to: chr9:127113331-127113655 (+-) All mismatches: ta (1), ta (4), ta (10), ta (11), ta (18), ta (21), ta (25), ta (31), ta (32), ta (33), ta (39), ta (44), ta (46), ta (47), ta (48), ta (51), ta (53), ta (65), ta (66), ta (77), ta (83), ta (92), ta (102), ta (105), ta (109), ta (115), ta (116), ta (122), ta (124), ta (127), tc (129), ta (130), ta (134), ta (136), ta (138), ta (140), ta (162), ta (163), ta (166), ta (180), ta (184), ta (189), ta (191), ta (198), ta (203), ta (209), ta (213), ta (214), ta (224), at (238), ta (242), ta (250), ta (279), ta (291), Editing mismatches: 52, all mismatches: 54, alignment length: 325, cluster length: 291, total number of Ts: 79 Locations in RNA: 1 4 10 11 18 21 25 31 32 33 39 44 46 47 48 51 53 65 66 77 83 92 102 105 109 115 116 122 124 127 130 134 136 138 140 162 163 166 180 184 189 191 198 203 209 213 214 224 242 250 279 291 Locations in genome: 127113655 127113652 127113646 127113645 127113638 127113635 127113631 127113625 127113624 127113623 127113617 127113612 127113610 127113609 127113608 127113605 127113603 127113591 127113590 127113579 127113573 127113564 127113554 127113551 127113547 127113541 127113540 127113534 127113532 127113529 127113526 127113522 127113520 127113518 127113516 127113494 127113493 127113490 127113476 127113472 127113467 127113465 127113458 127113453 127113447 127113443 127113442 127113432 127113414 127113406 127113377 127113365 Upstream nucleotide (in genome): g t t g g t a t t c g g t t a g g t c c c c c t g t c g a g a c a g c t g g g c c a g c t t c t a c c t Upstream nucleotide summary: a: 7, c: 15, g: 15, t: 15, other: 0 Downstream nucleotide (in genome): n a c t a a g g t t g g g t t g g g t a t g c c a t t g g a t g c a g c t g c g c c g g t t t c g g g a Downstream nucleotide summary: a: 8, c: 9, g: 20, t: 14, other: 1 Dinucleotide summary: aa: 0, ac: 2, ag: 3, at: 2, ca: 1, cc: 2, cg: 7, ct: 5, ga: 4, gc: 1, gg: 7, gt: 2, ta: 3, tc: 4, tg: 3, tt: 5, other: 1 >chr9:127113331-127113655 (+) ggttcagcaggttccccaaaaggctgcccagccttacagcagatgctgaaggcagagcagctgagggaggggcgctggccacatgtcactgatggtcagattccaaagtcctttctttatactgttgtggacaatctcagctgggtcaataagggcaggtggttcagcgagccacggcagccccctgtatctggattgtaatgtgaatctttagggtaattcctccagtgacctgtcaaggcttatgctaacaggagacttgcaggagaccgtgtgatttgtgtagtgagcctttgaaaatggttagtaccgggttcagtttagt >CV426378:1-325 (-) ggttcagcaggttccccaaaagnctgcccagcctaacagcagatgcagaaggcagagcagctgagggaggggcgcaggccacaagtctctgatggtcagataccaaagtccaatctatatacagttgaggacaaacacagcagggacaataagggcaggaggaacagcgagccacggcagcccccagaaacaggaacgaaaagagaatcaatagggaaataccaccagtgaccagtcaaggcatatgcaaacaggagacaagcaggagaccgagagaaaagagtagagagccaaagaaaaaggtaagaaccgggaacagttaaga End editing