Edited EST: DA277891, type: ag Aligns to: chr10:134984778-134985111 (++) All mismatches: ag (46), ag (110), ag (115), ag (123), ag (124), ag (140), ag (174), ag (182), ag (233), ag (234), cg (265), ag (274), Editing mismatches: 11, all mismatches: 12, alignment length: 334, cluster length: 229, total number of As: 47 Locations in RNA: 46 110 115 123 124 140 174 182 233 234 274 Locations in genome: 134984823 134984887 134984892 134984900 134984901 134984917 134984951 134984959 134985010 134985011 134985051 Upstream nucleotide (in genome): t c c c a a a t c a a Upstream nucleotide summary: a: 5, c: 4, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g c g a g g t g a g a Downstream nucleotide summary: a: 3, c: 1, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 3, at: 1, ca: 2, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr10:134984778-134985111 (+) ttttgttttggttttgaggcagggtctcactctgtcacccaggctagagtgcattggagcaatcacggctcactgcagcctccacctcctgggctcaagtgatcctcccacctcagcctcccaagtaggtggggctgcaagtgtgcaccaccatgtccagctaattttttaaaatttttatagagatggggtctcactctgttgcccaggctggtcttgaactcctgccttcaagtgatcctctccccttggcctcccaaagtgctggggataaaggcatgagccactggccccggccaattgtattgtcctctttttaattacatttttctgt >DA277891:1-334 (+) ttttgttttggttttgaggcagggtctcactctgtcacccaggctggagtgcattggagcaatcacggctcactgcagcctccacctcctgggctcaagtgatcctcccgcctcggcctcccgggtaggtggggctgcaggtgtgcaccaccatgtccagctaattttttaaagtttttatggagatggggtctcactctgttgcccaggctggtcttgaactcctgccttcgggtgatcctctccccttggcctcccaaagtggtggggatagaggcatgagccactggccccggccaattgtattgtcctctttttaattacatttttctgt End editing Edited EST: DW436099, type: ag Aligns to: chr10:51745657-51745895 (++) All mismatches: ag (16), ag (17), ag (40), ag (79), ag (88), ag (89), ag (93), ag (102), ag (128), ag (129), ag (170), Editing mismatches: 11, all mismatches: 11, alignment length: 238, cluster length: 155, total number of As: 47 Locations in RNA: 16 17 40 79 88 89 93 102 128 129 170 Locations in genome: 51745657 51745658 51745681 51745720 51745729 51745730 51745734 51745743 51745769 51745770 51745811 Upstream nucleotide (in genome): n a c c t a t t t a c Upstream nucleotide summary: a: 3, c: 3, g: 0, t: 4, other: 1 Downstream nucleotide (in genome): a g g t a a c g a t c Downstream nucleotide summary: a: 4, c: 2, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 1, ca: 0, cc: 1, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 1 >chr10:51745657-51745895 (+) aaggcaggtggatcacctgaggtcaggagttcgagatcaacctgaacaacatggtgaaactccatctctactaaaatacaaacattagctgagcatggggttgggctcctgtaatcccagctacttgggaggcttaggcacttgaatgagaatcacctggacccaggaggtggaggttgcagtgagcaacgattgtgccactgcctgggcaacagagtgagactctgtctcaaaaaaaa >DW436099:16-253 (+) ggggcaggtggatcacctgaggtcgggagttcgagatcaacctgaacaacatggtgaaactccgtctctactggaatgcaaacattggctgagcatggggttgggctcctgtggtcccagctacttgggaggcttaggcacttgaatgagaatcgcctggacccaggaggtggaggttgcagtgagcaacgattgtgccactgcctgggcaacagagtgagactctgtc-caaaaaaaa End editing Edited EST: DB502337, type: ag Aligns to: chr10:76632008-76632347 (++) All mismatches: ag (239), ag (256), ag (266), ag (329), ag (334), Editing mismatches: 5, all mismatches: 5, alignment length: 340, cluster length: 96, total number of As: 22 Locations in RNA: 239 256 266 329 334 Locations in genome: 76632246 76632263 76632273 76632336 76632341 Upstream nucleotide (in genome): c t t t t Upstream nucleotide summary: a: 0, c: 1, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): c g c t c Downstream nucleotide summary: a: 0, c: 3, g: 1, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 1, tt: 1, other: 0 >chr10:76632008-76632347 (+) taggcacatgggctcccatccttgcagcagctggtatagaggttgcatgacaacttgtgaggattctgcagtagcgtgggctcagctacatgacctaaataaaggtctctttcaaccctgagattctgtaagtttctttttctttagacagagtctcactctgtcacccaggctggagtgcagtgacacgatctcggctcagcgcaacctctgcctccaaggctcaagtgatccttccacctcagcctcccgagtaggtgggactacagttgtgtaccaccatggctggcaaagttttaaagtttttttgtagtgacagggtctcactatgttacccagg >DB502337:1-340 (+) taggcacatgggctcccatccttgcagcagctggtatagaggttgcatgacaacttgtgaggattctgcagtagcgtgggctcagctacatgacctaaataaaggtctctttcaaccctgagattctgtaagtttctttttctttagacagagtctcactctgtcacccaggctggagtgcagtgacacgatctcggctcagcgcaacctctgcctccaaggctcaagtgatccttccgcctcagcctcccgagtgggtgggactgcagttgtgtaccaccatggctggcaaagttttaaagtttttttgtagtgacagggtctcactgtgttgcccagg End editing Edited EST: BX953918, type: ag Aligns to: chr10:74870937-74871054 (++) All mismatches: ag (7), ag (11), ag (47), ag (62), ag (74), ag (78), ag (102), ag (104), ag (106), ag (107), ag (117), Editing mismatches: 11, all mismatches: 11, alignment length: 117, cluster length: 112, total number of As: 26 Locations in RNA: 7 11 47 62 74 78 102 104 106 107 117 Locations in genome: 74870943 74870947 74870983 74870998 74871010 74871014 74871038 74871040 74871042 74871043 74871054 Upstream nucleotide (in genome): t c c a t g a a a a a Upstream nucleotide summary: a: 6, c: 2, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g g c g c c a a a g n Downstream nucleotide summary: a: 3, c: 3, g: 4, t: 0, other: 1 Dinucleotide summary: aa: 3, ac: 0, ag: 2, at: 0, ca: 0, cc: 1, cg: 1, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 1 >chr10:74870937-74871054 (+) cgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccacctcggcctcccaaagtgctgggattacagacgtgagccaccgcgcccggcctaaaaaaaggtctcttaaa >BX953918:1-117 (+) cgtgttggccgggatggtctcgatctcctgacctcgtgatccgcccgcctcggcctcccaaggtgctgggattgcaggcgtgagccaccgcgcccggcctagagaggg-tctcttaag End editing Edited EST: AW970928, type: ag Aligns to: chr10:14949862-14950300 (++) All mismatches: ag (536), ag (539), ag (544), ag (545), ag (548), Editing mismatches: 5, all mismatches: 5, alignment length: 438, cluster length: 11, total number of As: 5 Locations in RNA: 536 539 544 545 548 Locations in genome: 14950290 14950292 14950296 14950297 14950300 Upstream nucleotide (in genome): c c c a c Upstream nucleotide summary: a: 1, c: 4, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): c c a c n Downstream nucleotide summary: a: 1, c: 3, g: 0, t: 0, other: 1 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 0, ca: 1, cc: 2, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr10:14949862-14950300 (+) ttttttttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatgacacaatctcagctcactgcaaccaccacctcccaggttcaagtgattctcctgccttggcctcctgcgtagctgggattacaggcatgagccaccgtgcctggcctttttcttttttaaacagggtcttgctctgtcacccagactagaggtgcagtggcacagtcatggctcactgcagcctcaatctcctgggctcaagtgatcctcaagggcctccagagtagcccaccaccatgcctggcttttttttttttttttttttttgtaagtagagacacatttcactgtgttggccaggctggtgtcgaactcctgggctcaagccattgcccacctcaaagtgctgggattacaagtgtgagccacca-ca-cccaacca >AW970928:111-548 (+) ttttttttttttttttgagacagagttttgctcttgttgcccaggctggagtgcaatgacacaatctcagctcactgcaaccaccacctcccaggttcaagtgattctcctgccttggcctcctgcgtagctgggattacaggcatgagccaccgtgcctggcctttttcttttttaaacagggtcttgctctgtcacccagactagaggtgcagtggcacagtcatggctcactgcagcctcaatctcctgggctcaagtgatcctcaagggcctccagagtagcccaccaccatgcctggctttttttttttttttttttt--gtaagtagagacacatttcactgtgttggccaggctggtgtcgaactcctgggctcaagccattgcccacctcaaagtgctgggattacaagtgtgagccac-gtcgacccggccg End editing Edited EST: DB172212, type: ag Aligns to: chr11:66402796-66403053 (++) All mismatches: ag (29), ag (36), ag (51), ag (100), ag (101), ag (116), ag (119), Editing mismatches: 7, all mismatches: 7, alignment length: 258, cluster length: 91, total number of As: 28 Locations in RNA: 29 36 51 100 101 116 119 Locations in genome: 66402824 66402831 66402846 66402895 66402896 66402911 66402914 Upstream nucleotide (in genome): t a c a a a a Upstream nucleotide summary: a: 5, c: 1, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): a c a a c a t Downstream nucleotide summary: a: 4, c: 2, g: 0, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 0, at: 1, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr11:66402796-66403053 (+) taggccagacgcgatggctcacgcctgtaatctcaacgctttgggaggccaaggtgggcagatcatgaggtcaggagaccagcctgatcaacacggtgaaactccgtctctactaaaaataccaaaattagccagccgtggaagtgtgcgcctgtaatcccagctacttaggaggccgaggcaggagaattgcttgaacctgggaggccgagattgcaccactgcactccagtcttggcgacagaggagactctgtct >DB172212:1-258 (+) taggccagacgcgatggctcacgcctgtgatctcagcgctttgggaggccgaggtgggcagatcatgaggtcaggagaccagcctgatcaacacggtgaggctccgtctctactagaagtaccaaaattagccagccgtggaagtgtgcgcctgtaatcccagctacttaggaggccgaggcaggagaattgcttgaacctgggaggccgagattgcaccactgcactccagtcttggcgacagaggagactctgtct End editing Edited EST: DW423674, type: ag Aligns to: chr11:57532977-57533251 (++) All mismatches: ag (43), ag (53), ag (79), ag (112), ag (128), ag (145), Editing mismatches: 6, all mismatches: 6, alignment length: 275, cluster length: 103, total number of As: 22 Locations in RNA: 43 53 79 112 128 145 Locations in genome: 57533003 57533013 57533039 57533072 57533088 57533105 Upstream nucleotide (in genome): a c a t c a Upstream nucleotide summary: a: 3, c: 2, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): t c g g c t Downstream nucleotide summary: a: 0, c: 2, g: 2, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 2, ca: 0, cc: 2, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr11:57532977-57533251 (+) catccaggctggagtgcagtggtgaaatcatggctcactgcagcctcaaactcctgggctcaagtggtgctcccacctcagtcttctgagtagctaggactatgggtgcacaccactatgcttggctaatttttgtgtatttttgtggagatggggtctctctatgtagtccaggctggtctcaaacacctgggctcaagccatcctcctacctcggcctcctaaagtgctgggattataggtgtgccccaccacacctggccctcccttatatt >DW423674:17-291 (+) catccaggctggagtgcagtggtgaagtcatggctcgctgcagcctcaaactcctgggctcaggtggtgctcccacctcagtcttctgagtagctgggactatgggtgcacgccactatgcttggctagtttttgtgtatttttgtggagatggggtctctctatgtagtccaggctggtctcaaacacctgggctcaagccatcctcctacctcggcctcctaaagtgctgggattataggtgtgccccaccacacctggccctcccttatatt End editing Edited EST: DW428755, type: ag Aligns to: chr11:12891641-12891806 (++) All mismatches: ag (116), ag (129), ag (130), ag (147), ag (155), ag (157), ag (169), ag (175), ag (178), Editing mismatches: 9, all mismatches: 9, alignment length: 166, cluster length: 63, total number of As: 16 Locations in RNA: 116 129 130 147 155 157 169 175 178 Locations in genome: 12891648 12891661 12891662 12891679 12891687 12891689 12891701 12891707 12891710 Upstream nucleotide (in genome): g c a c c a t c g Upstream nucleotide summary: a: 2, c: 4, g: 2, t: 1, other: 0 Downstream nucleotide (in genome): a a g g a g c t g Downstream nucleotide summary: a: 3, c: 1, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 2, cc: 0, cg: 1, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr11:12891641-12891806 (+) ggtctcgaactcctgacctcaagtgatgcgcctgcctcagcctcccaaagtgctgggattacagacatgagccactgcgcccagccgatttttgcccaattatctaccatgaatttgtgcaatagccattggcaccaacatgagacttttcctctggaatttttag >DW428755:109-274 (+) ggtctcggactcctgacctcgggtgatgcgcctgcctcggcctcccgaggtgctgggattgcagacgtgggccactgcgcccagccgatttttgcccaattatctaccatgaatttgtgcaatagccattggcaccaacatgagacttttcctctggaatttttag End editing Edited EST: DW432413, type: ag Aligns to: chr11:61903924-61904146 (++) All mismatches: ag (44), ag (69), ag (87), ag (89), ag (100), ag (109), ag (115), ag (120), ag (152), ag (213), Editing mismatches: 10, all mismatches: 10, alignment length: 223, cluster length: 170, total number of As: 50 Locations in RNA: 44 69 87 89 100 109 115 120 152 213 Locations in genome: 61903925 61903950 61903968 61903970 61903981 61903990 61903996 61904001 61904033 61904094 Upstream nucleotide (in genome): c c c t t t t a a c Upstream nucleotide summary: a: 2, c: 4, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g a t g t a t a t g Downstream nucleotide summary: a: 3, c: 0, g: 3, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 1, ca: 1, cc: 0, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 2, other: 0 >chr11:61903924-61904146 (+) caggtggttcacttgaggacgagttcaagaccagcctggccaacatagcgaaaccctatctctactaaaaatataaaaaattagctgggtgtgatggtacatgcctgtaattccagctacttgggaggctgaggcaccagaatcccttgaacccatgaggtggaggttgcagtgagctgagattgcgccactgcattcagcctgagtgacagagtgagagtct >DW432413:43-265 (+) cgggtggttcacttgaggacgagttcgagaccagcctggccaacgtggcgaaaccctgtctctactgaaaatgtaaagaattagctgggtgtgatggtacatgcctgtagttccagctacttgggaggctgaggcaccagaatcccttgaacccatgaggtggaggttgcggtgagctgagattgcgccactgcattcagcctgagtgacagagtgagagtct End editing Edited EST: BM686450, type: ag Aligns to: chr11:101960308-101960589 (++) All mismatches: ag (67), ag (75), ag (76), ag (92), ag (107), ag (156), ag (166), ag (203), ag (204), ag (229), Editing mismatches: 10, all mismatches: 10, alignment length: 284, cluster length: 163, total number of As: 43 Locations in RNA: 67 75 76 92 107 156 166 203 204 229 Locations in genome: 101960374 101960382 101960383 101960399 101960414 101960463 101960473 101960510 101960511 101960536 Upstream nucleotide (in genome): a g a a t g a c a c Upstream nucleotide summary: a: 5, c: 2, g: 2, t: 1, other: 0 Downstream nucleotide (in genome): c a a a g g t a g g Downstream nucleotide summary: a: 4, c: 1, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 1, ca: 1, cc: 0, cg: 1, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr11:101960308-101960589 (+) tcccagcactttgggaggccgaggcgggcggatcacaaggtcaggagatcgagaccattctgtctaacatggtgaaacctcatctctactaaaaatacaaaaaattagccgggcgtggtggcgggcgcctgtggtcccagctacttgggaggctgaggtaggagaatggcatgaacccgggaggcagaccttgcagtgagccaagatggtgccactgcactccagcccaggcaacagtgtgagactccgtctca--aaaaaaaaaaaaaaaaaaaaaaaaaaaa >BM686450:1-284 (+) tcccagcactttgggaggccgaggcgggcggatcacaaggtcaggagatcgagaccattctgtctagcatggtgggacctcatctctactagaaatacaaaaaattggccgggcgtggtggcgggcgcctgtggtcccagctacttgggaggctggggtaggagagtggcatgaacccgggaggcagaccttgcagtgagccgggatggtgccactgcactccagcccgggcaacagtgtgagactccgtctcannaaaaaaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: CD238370, type: ga Aligns to: chr11:101816450-101816647 (++) All mismatches: ga (185), ga (186), ga (193), ga (194), ga (195), Editing mismatches: 5, all mismatches: 5, alignment length: 197, cluster length: 11, total number of Gs: 5 Locations in RNA: 185 186 193 194 195 Locations in genome: 101816635 101816636 101816643 101816644 101816645 Upstream nucleotide (in genome): a g a g g Upstream nucleotide summary: a: 2, c: 0, g: 3, t: 0, other: 0 Downstream nucleotide (in genome): g a g g a Downstream nucleotide summary: a: 2, c: 0, g: 3, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 2, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr11:101816450-101816647 (+) atggtcatatggtagctgctagagctcaaccatcataccagtgttgtaggcaggaagaaagaacaggaaaaaagggtgtacctctgagatctctgcttggcaactttatttgcaagggagtctgaaaaatagcttttttaatgtgggtatattgctacccctaactatatagggtctgttaccaaggaaaaaagggaa >CD238370:1-197 (+) atggtcatatggtagctgctagagctcaaccatcataccagtgttgtaggcaggaagaaagaacaggaaaaaagggtgtacctctgagatctctgcttggcaactttatttgcaagggagtctgaaaaatagcttttttaatgtgggtatattgctacccctaactatatagggtctgttac-aaaaaaaaaaaaaaa End editing Edited EST: AW238995, type: ga Aligns to: chr11:117073718-117073911 (++) All mismatches: ga (172), ga (177), ga (200), ga (219), ga (222), Editing mismatches: 5, all mismatches: 5, alignment length: 194, cluster length: 51, total number of Gs: 21 Locations in RNA: 172 177 200 219 222 Locations in genome: 117073860 117073865 117073888 117073907 117073910 Upstream nucleotide (in genome): c a a c g Upstream nucleotide summary: a: 2, c: 2, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): c a g t t Downstream nucleotide summary: a: 1, c: 1, g: 1, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 0, cc: 1, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr11:117073718-117073911 (+) ctttccccagacatggccaacaagggtccttcctatggcatgagccgcgaagtgcagtccaaaatcgagaagaagtatgacgaggagctggaggagcggctggtggagtggatcatagtgcagtgtggccctgatgtgggccgcccagaccgtgggcgcttgggcttccaggtctggctgaagaatggcgtggt >AW238995:30-223 (+) ctttccccagacatggccaacaagggtccttcctatggcatgagccgcgaagtgcagtccaaaatcgagaagaagtatgacgaggagctggaggagcggctggtggagtggatcatantgcantgtggccctgatgtgggccacccaaaccgtgggcgcttgggcttccaagtctggctgaagaatggcatgat End editing Edited EST: AA381464, type: ag Aligns to: chr11:861379-861630 (++) All mismatches: ag (146), ag (147), ag (179), ag (182), ag (183), Editing mismatches: 5, all mismatches: 5, alignment length: 251, cluster length: 39, total number of As: 18 Locations in RNA: 146 147 179 182 183 Locations in genome: 861524 861525 861558 861561 861562 Upstream nucleotide (in genome): t a a a a Upstream nucleotide summary: a: 4, c: 0, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): a c a a t Downstream nucleotide summary: a: 3, c: 1, g: 0, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr11:861379-861630 (+) ccgagacgggctgatcatgaggtcaggagattgagatcaagaccatcctggcggctgggcgtggtggctcacgcctggaatcccagcactttgggaggtcgaggtgggtggatcacgaggttgggagatcaagaccatcctggctaacacggtgaaaccctgtctctactaaaagtacaaaaaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgt >AA381464:1-251 (+) ccgagacgggctgatcatnaggtcaggagattganatcaagaccatcctggcggctgggcgtggtggctcacgcctggaatcccagcactttgggaggtcgaggtgggtggatcacgaggttgggagatcaagaccatcctggctggcacggtgaaa-cctgtntctactaaaagtacagaaggttagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgt End editing Edited EST: AA381598, type: ag Aligns to: chr11:861379-861636 (++) All mismatches: ag (146), ag (147), ag (179), ag (182), ag (183), ag (253), ag (254), Editing mismatches: 7, all mismatches: 7, alignment length: 257, cluster length: 110, total number of As: 30 Locations in RNA: 146 147 179 182 183 253 254 Locations in genome: 861524 861525 861558 861561 861562 861632 861633 Upstream nucleotide (in genome): t a a a a g a Upstream nucleotide summary: a: 5, c: 0, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): a c a a t a c Downstream nucleotide summary: a: 4, c: 2, g: 0, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr11:861379-861636 (+) ccgagacgggctgatcatgaggtcaggagattgagatcaagaccatcctggcggctgggcgtggtggctcacgcctggaatcccagcactttgggaggtcgaggtgggtggatcacgaggttgggagatcaagaccatcctggctaacacggtgaaaccctgtctctactaaaagtacaaaaaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaaccc >AA381598:1-257 (+) ccgagacgggctgatcatgaggtcaggagattnanatcaagaccatcctggcggctgggcgtggtggctcacgcctggaatcccagcactttgggaggtcgaggtgggtggatcacgaggttgggagatcaagaccatcctggctggcacggtgaaacc-tgtntctactaaaagtacagaaggttagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctnaggcaggagaatggcgtgggccc End editing Edited EST: AA381688, type: ag Aligns to: chr11:861379-861669 (++) All mismatches: ag (146), ag (147), ag (179), ag (182), ag (183), ag (253), ag (254), Editing mismatches: 7, all mismatches: 7, alignment length: 290, cluster length: 110, total number of As: 30 Locations in RNA: 146 147 179 182 183 253 254 Locations in genome: 861524 861525 861558 861561 861562 861632 861633 Upstream nucleotide (in genome): t a a a a g a Upstream nucleotide summary: a: 5, c: 0, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): a c a a t a c Downstream nucleotide summary: a: 4, c: 2, g: 0, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr11:861379-861669 (+) ccgagacgggctgatcatgaggtcaggagattgagatcaagaccatcctggcggctgggcgtggtggctcacgcctggaatcccagcactttgggaggtcgaggtgggtggatcacgaggttgggagatcaagaccatcctggctaacacggtgaaaccctgtctctactaaaagtacaaaaaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggaggttgcagtgagccgagatcgcg >AA381688:1-290 (+) ccgagacgggctgatcatgaggtcaggagattgagatcaagaccatcctggcggctgggcgtggtggctcacgcctggaatcccagcactttgggaggtcgaggtgggtggatcacgaggttgggagatcaagaccatcctggctggcacggtgaaa-cctgtctctactaaaagtacagaaggttagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgggcccgggaggcggaggttgcagtnagccgagatcgcg End editing Edited EST: AA381790, type: ag Aligns to: chr11:861379-861635 (++) All mismatches: ag (146), ag (147), ag (179), ag (182), ag (183), ag (253), ag (254), Editing mismatches: 7, all mismatches: 7, alignment length: 256, cluster length: 110, total number of As: 30 Locations in RNA: 146 147 179 182 183 253 254 Locations in genome: 861524 861525 861558 861561 861562 861632 861633 Upstream nucleotide (in genome): t a a a a g a Upstream nucleotide summary: a: 5, c: 0, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): a c a a t a c Downstream nucleotide summary: a: 4, c: 2, g: 0, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr11:861379-861635 (+) ccgagacgggctgatcatgaggtcaggagattgagatcaagaccatcctggcggctgggcgtggtggctcacgcctggaatcccagcactttgggaggtcgaggtgggtggatcacgaggttgggagatcaagaccatcctggctaacacggtgaaaccctgtctctactaaaagtacaaaaaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacc >AA381790:1-256 (+) ccgagacgggctgatcatnaggtcaggagattganatcaagaccatcctggcggctgggcgtggtggctcacgcctggaatcccagcactttgggaggtcgaggtgggtggatcacgaggttgggagatcaagaccatcctggctggcacggtgaaa-cctgtctctactaaaagtacagaaggttagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatngcgtgggcc End editing Edited EST: AA381947, type: ag Aligns to: chr11:861379-861636 (++) All mismatches: ag (146), ag (147), ag (180), ag (183), ag (184), ag (254), ag (255), Editing mismatches: 7, all mismatches: 7, alignment length: 258, cluster length: 110, total number of As: 30 Locations in RNA: 146 147 180 183 184 254 255 Locations in genome: 861524 861525 861558 861561 861562 861632 861633 Upstream nucleotide (in genome): t a a a a g a Upstream nucleotide summary: a: 5, c: 0, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): a c a a t a c Downstream nucleotide summary: a: 4, c: 2, g: 0, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr11:861379-861636 (+) ccgagacgggctgatcatgaggtcaggagattgagatcaagaccatcctggcggctgggcgtggtggctcacgcctggaatcccagcactttgggaggtcgaggtgggtggatcacgaggttgggagatcaagaccatcctggctaacacggtgaaaccctgtctctactaaaagtacaaaaaattagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaaccc >AA381947:1-258 (+) ccgagacgggctgatcatgaggtcaggagattganatcaagaccatcctggcggctgggcgtggtggctcacgcctggaatcccagcactttgggaggtcgaggtgggtggatcacgaggttgggagatcaagaccatcctggctggcacggtgaaaccctgtntctactaaaagtacagaaggttagctgggcgtggtggcgggcgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgggccc End editing Edited EST: DW436266, type: ag Aligns to: chr12:72262985-72263221 (++) All mismatches: ag (110), ag (148), ag (149), ag (170), ag (173), ag (174), ag (179), ag (214), ag (215), Editing mismatches: 9, all mismatches: 9, alignment length: 237, cluster length: 106, total number of As: 31 Locations in RNA: 110 148 149 170 173 174 179 214 215 Locations in genome: 72263078 72263116 72263117 72263138 72263141 72263142 72263147 72263182 72263183 Upstream nucleotide (in genome): c c a t t a c t a Upstream nucleotide summary: a: 3, c: 3, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g a c c a a g a t Downstream nucleotide summary: a: 4, c: 2, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 1, ca: 1, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr12:72262985-72263221 (+) atatgtggaatatgtataattaaaaaaacaactcagggctgggtgctgtggctcatgcctgtaatcccagcactttgagaggccaaggtgggcaggtcacctgaggtcaggagtttgagaccagcgtggccaacgtggtgaaaccccatctctactaaaaacagaaaaattagtcgggcatggtggtgcatgcttgtaatcccagctactcgggaggctgaggcaggagaatcactt >DW436266:17-253 (+) atatgtggaatatgtataattaaaaaaacaactcagggctgggtgctgtggctcatgcctgtaatcccagcactttgagaggccaaggtgggcgggtcacctgaggtcaggagtttgagaccagcgtggccggcgtggtgaaaccccatctctgctggaaacggaaaaattagtcgggcatggtggtgcatgcttgtggtcccagctactcgggaggctgaggcaggagaatcactt End editing Edited EST: BE971286, type: ag Aligns to: chr12:51324101-51324311 (++) All mismatches: ag (20), ag (23), ag (64), ag (81), ag (93), ag (103), ag (182), ag (208), Editing mismatches: 8, all mismatches: 8, alignment length: 210, cluster length: 190, total number of As: 38 Locations in RNA: 20 23 64 81 93 103 182 208 Locations in genome: 51324119 51324122 51324163 51324180 51324192 51324202 51324282 51324308 Upstream nucleotide (in genome): a g a c t t g c Upstream nucleotide summary: a: 2, c: 2, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): t c g g g c a c Downstream nucleotide summary: a: 1, c: 3, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 0, cc: 1, cg: 1, ct: 0, ga: 1, gc: 1, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr12:51324101-51324311 (+) tgcccaggctggagtgcaatgacgtgatctccgctcactgcaacctccacctcgcgggtttaagcgattcttctgcctcagcctccctagtagctgggattacaggtgcccaccaccatgcccagctaatttgtatttttagttgagacagggtttcactacgttggccaggctggtcttgaactcctgatctcaggcaatccacccacct >BE971286:2-211 (+) tgcccaggctggagtgcagtggcgtgatctccgctcactgcaacctccacctcgcgggtttaggcgattcttctgcctcggcctccctagtggctgggattgcaggtgcccaccaccatgcccagctaa-ttgtatttttagttgagacagggtttcactacgttggccaggctggtcttggactcctgatctcaggcaatccacccgcct End editing Edited EST: DB116940, type: ag Aligns to: chr13:49836672-49837217 (++) All mismatches: ag (15), ag (17), ag (21), ag (59), ag (100), ag (135), ag (138), ag (149), ag (162), ag (197), Editing mismatches: 10, all mismatches: 10, alignment length: 547, cluster length: 182, total number of As: 40 Locations in RNA: 15 17 21 59 100 135 138 149 162 197 Locations in genome: 49836686 49836688 49836692 49836730 49836771 49836806 49836809 49836819 49836832 49836867 Upstream nucleotide (in genome): g g g c g t a c t c Upstream nucleotide summary: a: 1, c: 3, g: 4, t: 2, other: 0 Downstream nucleotide (in genome): g c g a t c g g a t Downstream nucleotide summary: a: 2, c: 2, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 1, cc: 0, cg: 1, ct: 1, ga: 0, gc: 1, gg: 2, gt: 1, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr13:49836672-49837217 (+) tttatttttttttgagacagagtctcgctctgtcacccaggctggagtgcagtggcacaatttcagctcattgcaacccccgcctcccaggttcaagcgattcccctgcctcagcctcctgagtagctgggattacaagc-gtgcaccagcatgcccggctaatttttgtatttttagtagagacaaggcttcaccatgttggtcaggctgatctcgaacttctgactcatgatctgcccacctcagcctccgaaagtgctgggattacaggcgtgaaccactgcacccagcctgtttccatatcattaagacagtggtgccaaactgccctggtagtcgtcatactcttcactgcactcagagggaaaaaagaaaaccagttttacataagaaggtccttgatgaaacagtaaaaagtatcaattttattaaatcccaacttgagtctgcatctttttaatattctgtgtgaggaaacaggaggtgggtataaagtgcttttgctacagacctaaggtatgaagatggctttaaggaaaaccatgt >DB116940:1-547 (+) tttatttttttttggggcagggtctcgctctgtcacccaggctggagtgcagtggcacgatttcagctcattgcaacccccgcctcccaggttcaagcggttcccctgcctcagcctcctgagtagctgggattgcaggcngtgcaccggcatgcccggctgatttttgtatttttagtagagacaaggcttcaccgtgttggtcaggctgatctcgaacttctgactcatgatctgcccacctcagcctccgaaagtgctgggattacaggcgtgaaccactgcacccagcctgtttccatatcattaagacagtggtgccaaactgccctggtagtcgtcatactcttcactgcactcagagggaaaaaagaaaaccagttttacataagaaggtccttgatgaaacagtaaaaagtatcaattttattaaatcccaacttgagtctgcatctttttaatattctgtgtgaggaaacaggaggtgggtataaagtgcttttgctacagacctaaggtatgaagatggctttaaggaaaaccatgt End editing Edited EST: BQ878348, type: ag Aligns to: chr14:51091840-51092626 (++) All mismatches: ag (697), ag (724), ag (739), ag (743), ag (744), ag (746), ga (747), ag (750), ag (759), ag (760), ag (816), Editing mismatches: 10, all mismatches: 11, alignment length: 786, cluster length: 120, total number of As: 38 Locations in RNA: 697 724 739 743 744 746 750 759 760 816 Locations in genome: 51092507 51092534 51092549 51092553 51092554 51092556 51092560 51092569 51092570 51092626 Upstream nucleotide (in genome): t c a c a g c c a a Upstream nucleotide summary: a: 4, c: 4, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): g g c a g g g a t n Downstream nucleotide summary: a: 2, c: 1, g: 5, t: 1, other: 1 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 1, ca: 2, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 1 >chr14:51091840-51092626 (+) aaaaagtgaaacagcttttttgctgacacagagaaagctttagtttggatagaaaatcaaaacagccacaacatgcccttaagccaaagcctaatccagagcaaggccctaactctgttcaattctatgaatgctgaaagagttggtaaagatgcagaagaaaagttggaagctagcagaggtttttggttcatgaggtttaagaagccatctccgtaacataaagtgcaaggtgaagcagcaaatcttgatgtagaagctacagcaagttatccagaagatctacctgagatcattgatgaaggtggccacggtaaacagagattttcaatatggatgaaatagtcttctattggaagatgccatccaggactttcccagctagagaggagaggtcaatgcctggcttcaaagcttggaagaacaggctgactttcttgtagctggtgactttaagtcgaacccagtgttcatttaccattccccaaattctaggcacttaagaatcatgctaggccgggcacgatggctcacacctgcactttgggaggcccaacactttgggaggccgaggtgggtggatcacgaggtcagatagagaccacggtaaaaccccgtctctactaaaaatacaaaaaattagccgggcgcagaggcgggcacctgtagtcccaggtactcaggaggctgaggcaggagaagggcgtgaacccaagaggcagagtttgcaatgagtcgagatcacaccaccagcctgggtgacagagtgagacccgtctcaaaaaaa >BQ878348:31-816 (+) aaaaagtgaaacagcttttttgctgac-cagagaaagctttagtttggatagaaaatcaaaacagccacaacatgcccttaagccaaagcctaatccagagcaaggccctaactctgttcaattctatgaatgctgaaagagttggtaaagatgcagaagaaaagttggaagctagcagaggtttttggttcatgaggtttaagaagccatctccgtaacataaagtgcaaggtgaagcagcaaatcttgatgtagaagctacagcaagttatccagaagatctacctgagatcattgatgaaggtggccacggtaaacagagattttcaatatggatgaaatagtcttctattggaagatgccatccaggactttcccagctagagaggagaggtcaatgcctggcttcaaagcttggaagaacaggctgactttcttgtagctggtgactttaagtcgaacccagtgttcatttaccattccccaaattctaggcacttaagaatcatgctaggccgggcacgatggctcacacctgcactttgggaggcccaacactttgggaggccgaggtgggtggatcacgaggtcagatagagaccacggtaaaaccccgtctctactaaaaatacaaaaaattagccgggcgcagaggcgggcacctgtggtcccaggtactcaggaggctgangcgggagaagggcgtgagcccggggagcggagtttgcggtgagtcgagatcacaccaccagcctgggtgacagagtgagacccgtctcaaaaaag End editing Edited EST: BG433095, type: ag Aligns to: chr14:102937630-102937891 (++) All mismatches: ag (158), ag (184), ag (213), ag (231), ag (232), Editing mismatches: 5, all mismatches: 5, alignment length: 260, cluster length: 75, total number of As: 23 Locations in RNA: 158 184 213 231 232 Locations in genome: 102937789 102937816 102937845 102937862 102937863 Upstream nucleotide (in genome): a a c c a Upstream nucleotide summary: a: 3, c: 2, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): t g g a g Downstream nucleotide summary: a: 1, c: 0, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 1, ca: 1, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr14:102937630-102937891 (+) aggaatttgttcatttcatctattttatctaatttgttggcatccaattgttcacagtattcttctgtaatactttttatttctgtgaaattggtagtaatgtctcctctttctgattttataatttgaattggctgggcacagtggctcatgtctgtaatcccactttggaaggttgaggcaggaagaccacttgagcctaggagttcaagaccag-cctgggcaacatagcaagacatcatctctaccaaaaaaaaaaaaa >BG433095:1-260 (+) aggaa-ttgttcatttcatctattttatctaa-ttgttggcatccaattgttcacagtattcttctgtaatactttttatttctgtgaaantggtagtaatgtctcctctttctgattttataatttgaattggctgggcacagtggctcatgtctgtagtcccactt-ggaaggttgaggcaggaggaccacttgagcctaggagttcaagaccggncctgggcaacatagcgggacatcatctctaccaaaaaaaaaaaaa End editing Edited EST: DW414048, type: ag Aligns to: chr15:52287661-52287960 (++) All mismatches: ag (204), ag (227), ag (232), ag (249), ag (254), ag (262), ag (273), ag (276), ag (284), ag (286), ag (298), Editing mismatches: 11, all mismatches: 11, alignment length: 300, cluster length: 95, total number of As: 23 Locations in RNA: 204 227 232 249 254 262 273 276 284 286 298 Locations in genome: 52287847 52287870 52287875 52287892 52287897 52287905 52287916 52287919 52287927 52287929 52287941 Upstream nucleotide (in genome): c a c g g c a a a t c Upstream nucleotide summary: a: 4, c: 4, g: 2, t: 1, other: 0 Downstream nucleotide (in genome): g t g g g c g t t t t Downstream nucleotide summary: a: 0, c: 1, g: 5, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 3, ca: 0, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 0, tg: 0, tt: 1, other: 0 >chr15:52287661-52287960 (+) gttcattcttgtgctgctttcacatccacttcttcatatacgtttgagtagtaactcctgcaagatttatgataggcctctctccctggggaaactttgaaaaggaagacttataggacaaactatagctgcctccgctatagttgttcctggggccacaatcaaaacttacaggctttctaggccaggcgcagtggctcatgcctgtaatcccagcactgtgggaggccgaggtgagtgggtcacttgaggtcaagaatttgagaatatcctgcccaacatggtgaaaccctgtctcta >DW414048:18-317 (+) gttcattcttgtgctgctttcacatccacttcttcatatacgtttgagtagtaactcctgcaagatttatgataggcctctctccctggggaaactttgaaaaggaagacttataggacaaactatagctgcctccgctatagttgttcctggggccacaatcaaaacttacaggctttctaggccgggcgcagtggctcatgcctgtagtcccggcactgtgggaggccggggtgggtgggtcgcttgaggtcaggagtttgagagtgtcctgcccaacgtggtgaaaccctgtctcta End editing Edited EST: DW432811, type: ag Aligns to: chr15:44787493-44787741 (++) All mismatches: ag (16), ag (40), ag (48), ag (49), ag (95), ag (111), ag (116), ag (146), ac (148), ag (155), ag (159), ag (181), Editing mismatches: 11, all mismatches: 12, alignment length: 249, cluster length: 166, total number of As: 40 Locations in RNA: 16 40 48 49 95 111 116 146 155 159 181 Locations in genome: 44787493 44787517 44787525 44787526 44787572 44787588 44787593 44787623 44787632 44787636 44787658 Upstream nucleotide (in genome): n c g a g t a t t c t Upstream nucleotide summary: a: 2, c: 2, g: 2, t: 4, other: 1 Downstream nucleotide (in genome): g c a t g g c c g g g Downstream nucleotide summary: a: 1, c: 3, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 1, ca: 0, cc: 1, cg: 1, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 1 >chr15:44787493-44787741 (+) agtcgtggccgggtgcggtggctcacgcctggaattctagcactttgggaggccgaggccggtggatcatgaggtcaggagatcgagagcatcctagctaacactgtgaaaccccgtctctactaaaaatacaataattagccaggtgtggtggcacatgcctgtagtcccagctacttgggaggcagagcctgcagtgagccaagatcacgccactgcactccagcctgggtgacagagcgagactcc >DW432811:16-264 (+) ggtcgtggccgggtgcggtggctcgcgcctggggttctagcactttgggaggccgaggccggtggatcatgaggtcaggggatcgagagcatcctggctagcactgtgaaaccccgtctctactaaaaatgccataattggccgggtgtggtggcacatgcctgtggtcccagctacttgggaggcagagcctgcagtgagccaagatcacgccactgcactccagcctgggtgacagagcgagactcc End editing Edited EST: AA365874, type: ag Aligns to: chr15:57394529-57394796 (++) All mismatches: ag (91), ag (141), ag (153), ag (160), ag (189), ag (193), ag (196), Editing mismatches: 7, all mismatches: 7, alignment length: 269, cluster length: 106, total number of As: 34 Locations in RNA: 91 141 153 160 189 193 196 Locations in genome: 57394619 57394669 57394681 57394688 57394717 57394721 57394724 Upstream nucleotide (in genome): a c c t a c g Upstream nucleotide summary: a: 2, c: 3, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): g c g g c g g Downstream nucleotide summary: a: 0, c: 2, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 0, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr15:57394529-57394796 (+) ctcacacctgtaatcccagcactttgggaggctgtggcaggtggattacctgaggtcaggagttcaagaccagtttggccaacatggcaaagccccgtctctactaaaaataccaaaattagctgggcgtcgtgacgcacacctgtaattccagctactagggaggctgagacagaagaatcacttgaacccaggaggcagaggttgcagtgagccaagatcgcatgactgcactccagc-ttgggtaacagagcacgactctgtcttt >AA365874:1-269 (+) ctcacacctgtaatcccagcactttgggaggctgtggcaggtggattacctgaggtcaggagttcaagaccagtttggccaacatggcaaggccccgtntctactaaaantaccaaanttagctgggcgtcgtgacgcacgcctgtnattccggctactggggaggctgagacagaagaatcacttgagcccggggggcagaggttgcagtgagccaagatcgcatgactgcactccancnttgggtaacagagcacgactctgtcttt End editing Edited EST: AA513593, type: ag Aligns to: chr15:62774554-62774803 (++) All mismatches: ag (139), ag (157), ag (159), ag (193), ag (194), Editing mismatches: 5, all mismatches: 5, alignment length: 250, cluster length: 56, total number of As: 18 Locations in RNA: 139 157 159 193 194 Locations in genome: 62774626 62774644 62774646 62774680 62774681 Upstream nucleotide (in genome): a a t t a Upstream nucleotide summary: a: 3, c: 0, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): c t c a t Downstream nucleotide summary: a: 1, c: 2, g: 0, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 2, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr15:62774554-62774803 (+) cactttgggaggccgaggcgggtggatcacctgaggtcgggagtttgagaccagcctgaccaacatggagaaaccccatctctgctaaaaatacaaaattagccaggcatggtggcgcatgcct-gtaatcccagctactcaggaggggggaggcaggagaatcgcttgaactggggaggcagagttgtggtgagccgagatcgtgccatcgcactccagcctggacaacaagagtaaaacgttgtctcaa >AA513593:67-316 (+) cactttgggaggccgaggcgggtggatcacctgaggtcgggagtttgagaccagcctgaccaacatggagaagccccatctctgctaaaagtgcaaaattagccaggcatggtggcgcatg-ctcgtggtcccagctactcaggaggggggaggcaggagaatcgcttgaactggggaggcagagttgtggtgagccgagatcgtgccatcgcactccagcctggacaacaagagtaaaacgttgtctcaa End editing Edited EST: F27015, type: ag Aligns to: chr17:46943188-46943493 (++) All mismatches: ag (149), ag (162), ag (165), ag (169), ag (175), ag (176), Editing mismatches: 6, all mismatches: 6, alignment length: 303, cluster length: 28, total number of As: 7 Locations in RNA: 149 162 165 169 175 176 Locations in genome: 46943336 46943349 46943352 46943356 46943362 46943363 Upstream nucleotide (in genome): t c c c t a Upstream nucleotide summary: a: 1, c: 3, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g g g c a t Downstream nucleotide summary: a: 1, c: 1, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr17:46943188-46943493 (+) acttaaaaaaaggaggccgggcacggtggctcatgcctgtaatcccagcactttgtgaggccgaggcgggtggatcacgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaactacaaaaaattagccaggtgtggcagcaggcacctgtaatcccagctactcgggaggctgaggcagagaattgcttgaacccgggaggcggaggttgcagtgagctaagatcgcaccactttactccagcctgagcgacagagcaagactctgtctcaaaaaaaaaaaa >F27015:1-303 (+) acttaaaaaaaggaggccgggcacggtggctcatgcctgtaatcccagcactttgtgaggccgaggcgggtggatcacgaggtcaggagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaactacaaaaaattggccaggtgtggcggcgggcgcctgtggtcccagctactcgggaggctgaggcagagaatt--t-gaacccgggaggcggaggttgcagtgagctaagatcgcaccactttactccagcctgagcgacagagcaagactctgtctcaaaaaaaaaaaa End editing Edited EST: BQ276554, type: ga Aligns to: chr17:47006188-47006426 (++) All mismatches: ga (234), ga (235), ga (237), ga (238), ga (241), Editing mismatches: 5, all mismatches: 5, alignment length: 239, cluster length: 8, total number of Gs: 5 Locations in RNA: 234 235 237 238 241 Locations in genome: 47006419 47006420 47006422 47006423 47006426 Upstream nucleotide (in genome): a g a g a Upstream nucleotide summary: a: 3, c: 0, g: 2, t: 0, other: 0 Downstream nucleotide (in genome): g a g a n Downstream nucleotide summary: a: 2, c: 0, g: 2, t: 0, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 2, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr17:47006188-47006426 (+) gtctgtcatccatttaagtgttcccactttcaagtgacaatcctctccttggccctgccatagggcagagcatgtctggcatagcagcctgacttttatgccctaatcttgagttgaggaaatatatgcacaggagtcaaagagatgtctttatatctgactgtatataaatgaagtttttttgttttttttgttttcctttttggtgcaataaagtttgttttggcagaaggaggaag >BQ276554:3-241 (+) gtctgtcatccatttaagtgttcccactttcaagtgacaatcctctccttggccctgccatagggcagagcatgtctggcatagcagcctgacttttatgccctaatcttgagttgaggaaatatatgcacaggagtcaaagagatgtctttatatctgactgtatataaatgaagtttttttgttttttttgttttcctttttggtgcaataaagtttgttttggcagaaaaaaaaaa End editing Edited EST: CD238445, type: ga Aligns to: chr17:78776304-78776428 (++) All mismatches: ga (103), ga (108), ga (109), ga (114), ga (119), Editing mismatches: 5, all mismatches: 5, alignment length: 124, cluster length: 18, total number of Gs: 5 Locations in RNA: 103 108 109 114 119 Locations in genome: 78776406 78776411 78776412 78776417 78776423 Upstream nucleotide (in genome): a a g a t Upstream nucleotide summary: a: 3, c: 0, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): a g a a c Downstream nucleotide summary: a: 3, c: 1, g: 1, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr17:78776304-78776428 (+) cgcttgaacccaggaagcggaggttgcagtgagtgagctgaggtcatgctactgcactccagcctggcgacagagtgagactccatc-tcaaaaaaaaaaaaagaaaaggaaaagaaaatgcatgt >CD238445:1-124 (+) cgcttgaacccaggaagcggaggttgcagtgagtgagctgaggtcatgctactgcactccagcctggcgacagagtgagactccatcgt-aaaaaaaaaaaaaaaaaaaaaaaaaaaaa-acatgt End editing Edited EST: BG899661, type: ag Aligns to: chr17:2878390-2878696 (++) All mismatches: ag (109), ag (113), ag (135), ag (152), ag (154), Editing mismatches: 5, all mismatches: 5, alignment length: 307, cluster length: 46, total number of As: 13 Locations in RNA: 109 113 135 152 154 Locations in genome: 2878413 2878417 2878439 2878456 2878458 Upstream nucleotide (in genome): t c c c g Upstream nucleotide summary: a: 0, c: 3, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): c g c g g Downstream nucleotide summary: a: 0, c: 2, g: 3, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr17:2878390-2878696 (+) ggcatgtgcctgtattcccagctactcaggaggctgaggcaggagaatcacttggacctgggaggcagaggttgcagtgagctgaaattgcgccacaatactactccagcaggtgacagagcaagactgcgtctcaaaaaaaagaaaaagaaaaagaaaaagtttcaaatatgatagtaattgcaataagtataaatagattaaattagcctattacaataccagcctatcaaattgaattaaaaatatagctatattctgcttataagagacatacctaaagaaaaatggtgtggaaagatttaaa >BG899661:86-392 (+) ggcatgtgcctgtattcccagctgctcgggaggctgaggcaggagaatcgcttggacctgggaggcgggggttgcagtgagctgaaattgcgccacaatactactccagcaggtgacagagcaagactgcgtctcaaaaaaaagaaaaagaaaaagaaaaagtttcaaatatgatagtaattgcaataagtataaatagattaaattagcctattacaataccagcctatcaaattgaattaaaaatatagctatattctgcttataagagacatacctaaagaaaaatggtgtggaaagatttaaa End editing Edited EST: BF196285, type: ga Aligns to: chr17:9231404-9231781 (++) All mismatches: ga (245), ga (254), ga (288), ga (345), ga (352), ga (359), ga (361), ga (371), Editing mismatches: 8, all mismatches: 8, alignment length: 378, cluster length: 127, total number of Gs: 31 Locations in RNA: 245 254 288 345 352 359 361 371 Locations in genome: 9231648 9231657 9231691 9231748 9231755 9231762 9231764 9231774 Upstream nucleotide (in genome): a a a g c c a a Upstream nucleotide summary: a: 5, c: 2, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): a a g g t a c g Downstream nucleotide summary: a: 3, c: 1, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 2, at: 0, ca: 1, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr17:9231404-9231781 (+) ctttctttcagagctagatctcactatgttgcccaggctggtcttgaactcttggcctcaactgatcctccacctccagagaatttatttataaccagctcttacacagaaaggtggtgataggttagagttatatacctaggtttttgtggctggtattggagaagttgggttctagtttctatggcctgccttgaagagggattctactttctgtggcctgtcttggggaaaagggaaggaagaaaaagaagagcaggagagggtcagaaagagacagcctttgaggcccttccaaagtccttcagttcaaagtactcagcatgccaaagtgctacactttgggtcatcgttttccgagccccaacaaggtcatct >BF196285:1-378 (+) ctttctttcagagctagatctcactatgttgcccaggctggtcttgaactcttggcctcaactgatcctccacctccagagaatttatttataaccagctcttacacagaaaggtggtgataggttagagttatatacctaggtttttgtggctggtattggagaagttgggttctagtttctatggcctgccttgaagagggattctactttctgtggcctgtcttggggaaaagggaaggaaaanaaanaaaagcangagagggtcagaaagagacagcctttgaagcccttccaaagtccttcagttcaaagtactcagcatgccaaagtgctacactttgagtcatcattttccaaaccccaacaaagtcatct End editing Edited EST: BF507507, type: ga Aligns to: chr17:5081630-5081872 (++) All mismatches: ga (232), ga (235), ga (243), ga (252), ga (253), Editing mismatches: 5, all mismatches: 5, alignment length: 242, cluster length: 24, total number of Gs: 5 Locations in RNA: 232 235 243 252 253 Locations in genome: 5081846 5081849 5081858 5081868 5081869 Upstream nucleotide (in genome): a a a a g Upstream nucleotide summary: a: 4, c: 0, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): a a a g t Downstream nucleotide summary: a: 3, c: 0, g: 1, t: 1, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr17:5081630-5081872 (+) tttacagtatatgtaaaaaaaagcatttattcaaattcaacaattagtcataaataactcttagcatatgtaaaagaaggcagcttccttaatctcattgtttgtctaaaatgaaattataataaactacataaggaatacaggatcactgaaacctgttccctggaatcagaaccagacacaccgtgttcaggaggtgtgatggggacaata-aaagaagaaaataaagaaaaataaaggtgt >BF507507:15-256 (+) tttacagtatatgtaaaaaaaagcatttattcaaattcaacaattagtcataaataactcttagcatatgtaaaagaaggcagcttccttaatctcattgtttgtctaaaatgaaattataataaactacataaggaatacaggatcactgaaacctgttccctggaatcagaaccagacacaccgtgttcaggaggtgtgatggggacaatataaaaaaaaaaa-aaaaaaaaa-aaaaatgt End editing Edited EST: AA381295, type: ag Aligns to: chr17:48804203-48804368 (++) All mismatches: ag (194), ag (212), ag (216), ag (244), ag (252), ag (265), Editing mismatches: 6, all mismatches: 6, alignment length: 165, cluster length: 72, total number of As: 22 Locations in RNA: 194 212 216 244 252 265 Locations in genome: 48804285 48804303 48804307 48804335 48804343 48804356 Upstream nucleotide (in genome): t t c c c c Upstream nucleotide summary: a: 0, c: 4, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): c g g g g g Downstream nucleotide summary: a: 0, c: 1, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr17:48804203-48804368 (+) cactttgggaggccgaggtgggcggtcacttgaggtcaggagttggagaccagcctggctaacatggtgaaaccctgtctctactaaaaatacaaaaattagccaggcgttgtggccggtgcttgtaatcccagctactcaggaggctgaggcaggagaatttctt >AA381295:113-277 (+) cactttgggaggccgaggtgggcggtcacttgaggtcaggagttggagaccagcctggctaacatggtgaa-ccctgtntctgctaaaaatacaaaanttggccgggcgttgtggccggtgcttgtaatcccggctactcgggaggctgaggcgggagaatttctt End editing Edited EST: DW427450, type: ag Aligns to: chr18:9138259-9138521 (++) All mismatches: ag (22), ag (44), ag (87), ag (108), ag (109), gc (128), ag (148), ag (149), ag (175), ag (190), ag (201), Editing mismatches: 10, all mismatches: 11, alignment length: 263, cluster length: 180, total number of As: 46 Locations in RNA: 22 44 87 108 109 148 149 175 190 201 Locations in genome: 9138264 9138286 9138329 9138350 9138351 9138390 9138391 9138417 9138432 9138443 Upstream nucleotide (in genome): c t t t a t a c a c Upstream nucleotide summary: a: 3, c: 3, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): c g g a a a t g c g Downstream nucleotide summary: a: 3, c: 2, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 1, ca: 0, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 2, tt: 0, other: 0 >chr18:9138259-9138521 (+) ccagcactttgggaggccgacgtgggtagatcacctgaggtcaggagttcgagaccagcctgaccaatatagtgaaacccccgtctctactaaatatacaaaattagccaggcgtggtggcgcatgtctgtaatcccagctacttgggaagccgaggcaggggaatcgcttgaacccgggcggcagaggttgcagtgagccgagatcgtgccactgcactccagcctgggccacaagagcgaaactccgtcgcaaaaacatac >DW427450:17-279 (+) ccagcgctttgggaggccgacgtgggtggatcacctgaggtcaggagttcgagaccagcctgaccaatatggtgaaacccccgtctctactggatatacaaaattagccagccgtggtggcgcatgtctgtggtcccagctacttgggaagccgaggcgggggaatcgcttgagcccgggcggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggccacaagagcgaaactccgtcgcaaaaacatac End editing Edited EST: DA201099, type: ag Aligns to: chr19:14300570-14301054 (++) All mismatches: ag (235), ag (270), ag (271), ag (275), ag (345), ag (354), ag (388), ag (402), ag (403), ag (406), Editing mismatches: 10, all mismatches: 10, alignment length: 485, cluster length: 172, total number of As: 33 Locations in RNA: 235 270 271 275 345 354 388 402 403 406 Locations in genome: 14300804 14300839 14300840 14300844 14300914 14300923 14300957 14300971 14300972 14300975 Upstream nucleotide (in genome): c c a a t t c c a c Upstream nucleotide summary: a: 3, c: 5, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): a a g t t g a a g a Downstream nucleotide summary: a: 5, c: 0, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 1, ca: 5, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 1, other: 0 >chr19:14300570-14301054 (+) tacatctatttaaggttacatgatattttgatatccattatgtgttgtgaagtgattaccacaaccaagctaacaacacatccaacacctcacctagacacctttctggtgtgtgtggtgagaacacttgagtctaattcctcagcaagtttcaagaaaacagtatgctataataattattattattttgagacggagtctcgctctgtcacccatgctggagtgcagtggcgcaatcttggctcactgcaacttctccctcccagttcaagcaattctcgtgcctcagcctcctaagtggccggggctacgggtgggcaccaccgtgcctggttaatttttgtatttttagtagagatggagtctcatgttgcccaggctggtctcaaactcttgagctcaagcaatctgcctgcctcggcctcccaaagtgctgcgattataggtatgagccgccacacctggcctgctattattaattatag >DA201099:1-485 (+) tacatctatttaaggttacatgatattttgatatccattatgtgttgtgaagtgattaccacaaccaagctaacaacacatccaacacctcacctagacacctttctggtgtgtgtggtgagaacacttgagtctaattcctcagcaagtttcaagaaaacagtatgctataataattattattattttgagacggagtctcgctctgtcacccatgctggagtgcagtggcgcgatcttggctcactgcaacttctccctcccagttcgggcagttctcgtgcctcagcctcctaagtggccggggctacgggtgggcaccaccgtgcctggttaatttttgtgtttttagtggagatggagtctcatgttgcccaggctggtctcgaactcttgagctcgggcgatctgcctgcctcggcctcccaaagtgctgcgattataggtatgagccgccacacctggcctgctattattaattatag End editing Edited EST: DA314613, type: ag Aligns to: chr19:50788026-50788525 (++) All mismatches: ag (192), ag (227), ag (228), ag (231), ag (232), ag (240), ag (267), ag (294), ag (308), ag (390), ag (409), Editing mismatches: 11, all mismatches: 11, alignment length: 499, cluster length: 218, total number of As: 42 Locations in RNA: 192 227 228 231 232 240 267 294 308 390 409 Locations in genome: 50788218 50788253 50788254 50788257 50788258 50788266 50788293 50788320 50788334 50788416 50788435 Upstream nucleotide (in genome): g c a c a c t a t t t Upstream nucleotide summary: a: 3, c: 3, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): t a g a t c c t g t a Downstream nucleotide summary: a: 3, c: 2, g: 2, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 2, ca: 2, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 1, tg: 1, tt: 1, other: 0 >chr19:50788026-50788525 (+) catatgatgctatcatggctccatgttaatttttgtgaatataaatatccaagtattccaacactgctctccactgacttgtttttgcatatctattgaaagtcatttttcttcttcttcttctcctccttctttttcttcttcttcttctttttttttttttttttgcccaggctggagtgcagtggcgtgatcttggcttgctgcaacttctgcttcccgggttcaagcaattctcccacctcagcctcccgagtggcttggattacaggtgtgcgccaccacacctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggtggtcttgaactcctgacttcaggcgatctgcctgcctcagcctcccaatatgctggaattacaagcataagccactgcaccagccttttcttcttatttgaagttattttgcctcttctagttcctttgcatttccgtatgtattttagaatcagtttg >DA314613:1-499 (+) catatgatgctatcatggctccatgttaatttttgtgaatataaatatccaagtattccaacactgctctccactgacttgtttttgcatatctattgaaagtcatttttcttcttcttcttctcctccttctttttcttcttcttcttc-ttttttttttttttttgcccaggctggagtgcagtggcgtggtcttggcttgctgcaacttctgcttcccgggttcgggcggttctcccgcctcagcctcccgagtggcttggattgcaggtgtgcgccaccacacctggctagtttttgtatttttggtagagatggggtttcaccatgttggccaggtggtcttgaactcctgacttcaggcgatctgcctgcctcagcctcccaatgtgctggaattacaagcatgagccactgcaccagccttttcttcttatttgaagttattttgcctcttctagttcctttgcatttccgtatgtattttagaatcagtttg End editing Edited EST: DA337033, type: ag Aligns to: chr19:58372126-58372633 (++) All mismatches: ag (120), ag (124), ag (181), ag (195), ag (218), Editing mismatches: 5, all mismatches: 5, alignment length: 508, cluster length: 99, total number of As: 20 Locations in RNA: 120 124 181 195 218 Locations in genome: 58372245 58372249 58372306 58372320 58372343 Upstream nucleotide (in genome): g c a a c Upstream nucleotide summary: a: 2, c: 2, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): g g c g g Downstream nucleotide summary: a: 0, c: 1, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr19:58372126-58372633 (+) gttataaatgaaactgctatatttgaatgcagttgttcatgtaggtatgtttcactatggtaatatggtggtgtgcagtgcctgagtcacgtgatagattaaagtacaactcttttttgagacagagtctcactctgtcacccaggcgggagttaggtggcatgatttcggctcactgcaacctctgcctcccaagttcaactgattcttctgcctcagcctcccgagtagcagggattaccggtgtgcaccaccatgcctggataacttttttttttatttctattagcaatggggtttcaccatgctggccaggcttgttatgaactgacctcaagtgatctgcctgcctcagcttctcaggtgtgacctactgtgcttggcctaatgtacaactttttaagcaatgccaaactatgacttaagaatgaaattattgctcatttgtatatctatctaccatcagtgtccaagaatttctgttctatcttaccaagagggagtatgg >DA337033:1-508 (+) gttataaatgaaactgctatatttgaatgcagttgttcatgtaggtatgtttcactatggtaatatggtggtgtgcagtgcctgagtcacgtgatagattaaagtacaactcttttttgggacggagtctcactctgtcacccaggcgggagttaggtggcatgatttcggctcactgcagcctctgcctcccaggttcaactgattcttctgcctcggcctcccgagtagcagggattaccggtgtgcaccaccatgcctggataacttttttttttatttctattagcaatggggtttcaccatgctggccaggcttgttatgaactgacctcaagtgatctgcctgcctcagcttctcaggtgtgacctactgtgcttggcctaatgtacaactttttaagcaatgccaaactatgacttaagaatgaaattattgctcatttgtatatctatctaccatcagtgtccaagaatttctgttctatcttaccaagagggagtatgg End editing Edited EST: DA521139, type: ag Aligns to: chr19:12974652-12975210 (++) All mismatches: ag (313), ag (326), ag (334), ag (438), ag (444), ag (452), ag (462), ag (465), ag (510), ag (545), ag (546), Editing mismatches: 11, all mismatches: 11, alignment length: 560, cluster length: 234, total number of As: 54 Locations in RNA: 313 326 334 438 444 452 462 465 510 545 546 Locations in genome: 12974963 12974976 12974984 12975088 12975094 12975102 12975112 12975115 12975160 12975195 12975196 Upstream nucleotide (in genome): a a c t c c a c g t a Upstream nucleotide summary: a: 4, c: 4, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): c g c g g g g g t a g Downstream nucleotide summary: a: 1, c: 2, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 3, at: 0, ca: 0, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr19:12974652-12975210 (+) ttgggaagctgaggcaggaggatcctttgaacccaagagttggagaccagcttgggcaacacaatgaaactcgtttctacaaaaaacttttttttttttttttttgagacggagtcttgctctgtcacccagg-ctggactgcagtggtgcgatcttggatctctgcaacctctgcctcccaggttcaagccattcttctgccttagcctcccgagtagctgggattacagccgtctgccaacaagccaggctaactttagtattcttttttcagagatggggtttcaccatgttgaccaggctggtctcgaactcctgacctcaagtgatccacccgccttggcttcccaaagtgctgggatttcaggcgtgagctaccatgcccagccttgaacaattttttaaaaatcagctgggcatggtggctcacatctgtagtcccagctactcaggaggctgaagcaggaggattgcttgagctgggaggttgaggatgcagtgagctgtgatcttgccaccgcactctagactgggcaatggagtaagaccctgtctcaaa >DA521139:1-560 (+) ttgggaagctgaggcaggaggatcctttgaacccaagagttggagaccagcttgggcaacacaatgaaactcgtttctacaaaaaacttttttttttttttttttgagacggagtcttgctctgtcacccaggcctggactgcagtggtgcgatcttggatctctgcaacctctgcctcccaggttcaagccattcttctgccttagcctcccgagtagctgggattacagccgtctgccaacaagccaggctaactttagtattcttttttcagagatggggtttcaccatgttgaccaggctggtctcgagctcctgacctcaggtgatccgcccgccttggcttcccaaagtgctgggatttcaggcgtgagctaccatgcccagccttgaacaattttttaaaaatcagctgggcatggtggctcacatctgtggtcccggctactcgggaggctgaggcgggaggattgcttgagctgggaggttgaggatgcagtgagctgtggtcttgccaccgcactctagactgggcaatggagtgggaccctgtctcaaa End editing Edited EST: DA867461, type: ag Aligns to: chr19:1376013-1376355 (++) All mismatches: ag (44), ag (59), ag (168), ag (170), ag (171), ag (214), ag (215), Editing mismatches: 7, all mismatches: 7, alignment length: 344, cluster length: 171, total number of As: 35 Locations in RNA: 44 59 168 170 171 214 215 Locations in genome: 1376055 1376070 1376178 1376180 1376181 1376224 1376225 Upstream nucleotide (in genome): c a t c a c a Upstream nucleotide summary: a: 3, c: 3, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): c g c a t a g Downstream nucleotide summary: a: 2, c: 2, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 1, ca: 2, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr19:1376013-1376355 (+) ttggccaggctggtcttgaactcctgatctcgtgatccacccacctcggcctcccaaagtgctgggattacaggcgtgagccaaagtgcctggactctctgtcatactc-ttttttttttttttttttttagagacagaatttagctctgtcgcccaggctggagtacaatggcatgatcttggctcactgcaagcaccacctcccggtttcaagcgattctcctacctcagcctcctaagtagctgggattacagacatgcgccaccacgcccggctgtttgtttttttttttgtttgtttttttttttttttggtattttttgtagagacagggtttcaccg >DA867461:2-345 (+) ttggccaggctggtcttgaactcctgatctcgtgatccacccgcctcggcctcccaaggtgctgggattacaggcgtgagccaaagtgcctggactctctgtcatactctttttttttttttttttttttagagacagaatttagctctgtcgcccaggctggagtgcggnggcatgatcttggctcactgcaagcaccacctcccggtttcgggcgattctcctacctcagcctcctaagtagctgggattacagacatgcgccaccacgcccggctgtttgtttttttttttgtttgtttttttttttttttggtattttttgtagagacagggtttcaccg End editing Edited EST: DB212511, type: ag Aligns to: chr19:12003424-12003983 (++) All mismatches: ag (327), ag (328), ag (331), ag (332), ag (357), ag (411), ag (412), ag (433), ag (462), ag (463), ag (475), Editing mismatches: 11, all mismatches: 11, alignment length: 561, cluster length: 149, total number of As: 32 Locations in RNA: 327 328 331 332 357 411 412 433 462 463 475 Locations in genome: 12003749 12003750 12003753 12003754 12003779 12003833 12003834 12003855 12003884 12003885 12003897 Upstream nucleotide (in genome): c a t a t t a t c a c Upstream nucleotide summary: a: 4, c: 3, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a g a t g a a g a g c Downstream nucleotide summary: a: 5, c: 1, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 1, ca: 2, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 2, tt: 0, other: 0 >chr19:12003424-12003983 (+) attaaataaataaaaaaaaagtgaagagggaaagggtctttcctgtttcccttcagtcatttacaacattttacaaaacactataggtaagaaagaaggcgaatctgtaatcagggaaaggagagttccagctggctatgtgaaagc-tgtgtgtcatgtgactcaaccccatgattgcattgcttcaagatagagatccaccagcttaaatatttgaattactttgttgtttttgtttgtttgtttgttttgagacaactctgtggcccaggttggagtgcagtgacatcatctcagttcactgcagcctttgcctcctgggttcaagtaattctcctgcttcagcctcccaagtagctgggattacatgcatgtgccaccgcacatggctaatttttgtatttttagtaaacacggggttttaccacgttagccaggctggtctccaactcctgtcctcaagtggtccgcccaccttggcctcctgaagtggtgggattacaggtataagccagctttcctggcctgacttaggtagaaattttctagttatgtaatca >DB212511:1-561 (+) attaaataaataaaaaaaaagtgaagagggaaagggtctttcctgtttcccttcagtcatttacaacattttacaaaacactataggtaagaaagaaggcgaatctgtaatcagggaaaggagagttccagctggctatgtgaaagcttgtgtgtcatgtgactcaaccccatgattgcattgcttcaagatagagatccaccagcttaaatatttgaattactttgttgtttttgtttgtttgtttgttttgagacaactctgtggcccaggttggagtgcagtgacatcatctcagttcactgcagcctttgcctcctgggttcgggtggttctcctgcttcagcctcccaagtggctgggattacatgcatgtgccaccgcacatggctaatttttgtatttttagtggacacggggttttaccacgttggccaggctggtctccaactcctgtcctcgggtggtccgcccgccttggcctcctgaagtggtgggattacaggtataagccagctttcctggcctgacttaggtagaaattttctagttatgtaatca End editing Edited EST: DW411576, type: ag Aligns to: chr19:38446018-38446210 (++) All mismatches: ag (14), ag (15), ag (16), ag (17), ag (40), Editing mismatches: 5, all mismatches: 5, alignment length: 192, cluster length: 28, total number of As: 19 Locations in RNA: 14 15 16 17 40 Locations in genome: 38446019 38446020 38446021 38446022 38446046 Upstream nucleotide (in genome): c a a a a Upstream nucleotide summary: a: 4, c: 1, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a c g Downstream nucleotide summary: a: 3, c: 1, g: 1, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr19:38446018-38446210 (+) caaaactctgtctcaaaaaaaaaaaaaaagagtatgcaattcagctgtttttggtaaatttgtgaagctgcataactatcaccacaatccagttttagaatattaccaccaccccaaaagatatccatcttgtacctctttgcaggcagtccttgcttccacgcctaggcccaggctaccactaacctgctct >DW411576:13-204 (+) cgggg-tctgtctcaaaaaaaaaaaaaaggagtatgcaattcagctgtttttggtaaatttgtgaagctgcataactatcaccacaatccagttttagaatattaccaccaccccaaaagatatccatcttgtacctctttgcaggcagtccttgcttccacgcctaggcccaggctaccactaacctgctct End editing Edited EST: DW422786, type: ag Aligns to: chr19:36261402-36261678 (++) All mismatches: ag (139), ag (148), ag (185), ag (193), ag (227), ag (231), ag (272), ag (273), ag (286), Editing mismatches: 9, all mismatches: 9, alignment length: 277, cluster length: 148, total number of As: 40 Locations in RNA: 139 148 185 193 227 231 272 273 286 Locations in genome: 36261524 36261533 36261570 36261578 36261612 36261616 36261657 36261658 36261671 Upstream nucleotide (in genome): t c c c t a t a c Upstream nucleotide summary: a: 2, c: 4, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): a c g a c a a t g Downstream nucleotide summary: a: 4, c: 2, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 1, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr19:36261402-36261678 (+) gtcccttcatcttgaaactgggcccctcaacaaataaaatgcagaggaagtgatgcagcttaacttctaaagtgcagttagaaaagatgatttctcagctgggcatggtggctcacgcctgtaatcccagcactttgggaggctcaggtgggcagattacttgaggtcaggggttcaagaccagcctggccaacatggtgaaatgtctctactaaaaatacaaaaattggccaggcattggtggtgggtgcctgtaatcccagctactcaggaggct >DW422786:17-293 (+) gtcccttcatcttgaaactgggcccctcaacaaataaaatgcagaggaagtgatgcagcttaacttctaaagtgcagttagaaaagatgatttctcagctgggcatggtggctcacgcctgtgatcccagcgctttgggaggctcaggtgggcagattacttgaggtcgggggttcgagaccagcctggccaacatggtgaaatgtctctgctagaaatacaaaaattggccaggcattggtggtgggtgcctgtggtcccagctactcgggaggct End editing Edited EST: BQ433272, type: ag Aligns to: chr19:23961055-23961252 (++) All mismatches: ag (234), ag (261), ag (278), ag (327), ag (342), ag (345), ag (351), ag (373), Editing mismatches: 8, all mismatches: 8, alignment length: 198, cluster length: 140, total number of As: 31 Locations in RNA: 234 261 278 327 342 345 351 373 Locations in genome: 23961088 23961115 23961132 23961181 23961196 23961199 23961205 23961227 Upstream nucleotide (in genome): t a c a t t c g Upstream nucleotide summary: a: 2, c: 2, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): a g g t g g g c Downstream nucleotide summary: a: 1, c: 1, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 0 >chr19:23961055-23961252 (+) cccaggctggaatgcaatggcgcaatctcggctaaccgcaacctctgcctcccaggttcaagcgattctactgcctcagcctcccaagtagctgggattacaggcctgcaccaccacgcccagctaattttttgtatttttagtagagacagggtttcttcatgttggtcagactggtctcgaattcctgacctcagg >BQ433272:201-398 (+) cccaggctggaatgcaatggcgcaatctcggctgaccgcaacctctgcctcccaggttcaggcgattctactgcctcggcctcccaagtagctgggattacaggcctgcaccaccacgcccagctagttttttgtatttttggtggagacggggtttcttcatgttggtcaggctggtctcgaattcctgacctcagg End editing Edited EST: AA258506, type: ag Aligns to: chr19:12351105-12351526 (++) All mismatches: ag (7), ag (11), ag (37), ag (38), ag (43), ag (47), ag (51), ag (78), ag (119), ag (143), ag (150), Editing mismatches: 11, all mismatches: 11, alignment length: 420, cluster length: 147, total number of As: 36 Locations in RNA: 7 11 37 38 43 47 51 78 119 143 150 Locations in genome: 12351109 12351113 12351139 12351140 12351145 12351149 12351153 12351180 12351223 12351248 12351255 Upstream nucleotide (in genome): a t t a c t c g t g t Upstream nucleotide summary: a: 2, c: 2, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): a g a t g c g a c g t Downstream nucleotide summary: a: 3, c: 2, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 2, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 1, tt: 1, other: 0 >chr19:12351105-12351526 (+) aaaaaattagccgggtgtggtggctcgtgcctgtaattccagctactcaggaggctgaggcaggagaattacttgaacccaggagatggagggtgcagtgcactgagattgtgccactacactccagcctgggagacagagtgagattctatctcaaaaaaaaaaaaaaaaaaactagaaaaaatcaaccctaacgttcatttggaatctcccctaataccaaaacaatcttgaaaaaaagttcaaagactcacgcttcctgatttcaaactggctataaaactaccatcatcgaaaccacatggtactgtgtagggacagacatacagaacacagatcctagaaagaaaatgcttgca-tatgtggtcaaatgattttttgacaacagtgccatgatcattcaatggagaaaggatggtctt >AA258506:3-422 (+) aaaagattggccgggtgtggtggctcgtgcctgtggttccggctgctcgggaggctgaggcaggagaattacttggacccaggagatggagggtgcagtg-a-tgagattgtgccactgc-ctccagcctgggagacagagtgggattctgtctcaaaaaaaaaaaaaaaaaaactagaaaaaatcaaccctaacgttcatttggaatctcccctaataccaaaacaatcttgaaaaaaagttcaaagactcacgcttcctgatttcaaactggctataaaactaccatcatcgaaaccacatggtactgtgtagggacagacatacagaacacagatcctagaaagaaaatgcttgcagtatgtggtcaaatgattttttgacaacagtgccatgatcattcaatggagaaaggatggtctt End editing Edited EST: AA321669, type: ag Aligns to: chr19:13883703-13884025 (++) All mismatches: ag (150), ag (153), ag (160), ag (172), ag (190), ag (225), ag (250), ga (256), ag (276), ag (282), ag (304), Editing mismatches: 10, all mismatches: 11, alignment length: 323, cluster length: 155, total number of As: 34 Locations in RNA: 150 153 160 172 190 225 250 276 282 304 Locations in genome: 13883852 13883855 13883862 13883874 13883892 13883927 13883952 13883978 13883984 13884006 Upstream nucleotide (in genome): t c t a c g t c c t Upstream nucleotide summary: a: 1, c: 4, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): t c c t g t g t g g Downstream nucleotide summary: a: 0, c: 2, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 1, tg: 2, tt: 1, other: 0 >chr19:13883703-13884025 (+) ctagtacctccctcttaaggtcagggctggagctagggtgacatctccagggcagaattttaagaggacaccaaaaaagctcagcaaccaagataaaaaatattttaaagcaatattttgttttgggttttttttttttgagatcaagtatcactcgttacccaggctggaatgtagaggcgagatctcagctcactgaaacctgtgcctccccggttcaagcgattctcctgccacagcctcctgagtagctgggattacaggcatgcgccaccatgcccagctaatttttctatttttagtagagacatgatttcaccatg >AA321669:1-323 (+) ctagtacctccctcttaaggtcagggctggagctagggtgacatctccagggcagaattttaagaggacaccaaaaaagctcagcaaccaagataaaaaatattttaaagcaatattttgttttgggttttttttttttgagatcaagtgtcgctcgttgcccaggctggagtntagaggcgagatctcggctcactgaaacctgtgcctccccggttcaagcggttctcctgccacagnctcctgagtggctggaattncaggcatgcgncaccgtgcccggctaatttttctatttttagtggagacatgatttcaccatg End editing Edited EST: AA365185, type: ag Aligns to: chr19:56890517-56890828 (++) All mismatches: ag (50), ag (69), ag (75), ag (78), ag (91), ag (117), ag (118), ag (125), ag (151), ag (187), ag (227), Editing mismatches: 11, all mismatches: 11, alignment length: 312, cluster length: 178, total number of As: 55 Locations in RNA: 50 69 75 78 91 117 118 125 151 187 227 Locations in genome: 56890566 56890585 56890591 56890594 56890607 56890633 56890634 56890641 56890667 56890703 56890743 Upstream nucleotide (in genome): t c t a t t a g t t c Upstream nucleotide summary: a: 2, c: 2, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): g t t t g a g a g g g Downstream nucleotide summary: a: 2, c: 0, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 0, cc: 0, cg: 1, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 4, tt: 1, other: 0 >chr19:56890517-56890828 (+) gaaatttggtagtaagtcttccagttttgttattttaacaaatttctctaggctgggcatggtggctcatgcctataatcccagcactttaggagccccagacaggaggatcacttaagcgcagaagatcaagaccagcctgggaaatatagcaagaccttatctctacaaaaaaatttagaaattagctgggcatggtggcacccatctgtagtcctaactgctcaggaggctgaggtgggaggattgcttgagtccaggagttcaaggctgcagtgagttgtgatcacaccattgcagtccagccaggtt >AA365185:1-312 (+) gaaatttggtagtaagtnttccagttttgttattttaacaaatttntntgggctgggcatggtggctcgtgcctgtagtcccagcactttgggagccccagacaggaggatcacttgggcgcaggagatcaagaccagcctgggaaatatggcaagaccttatctntacaaaaaaatttagaaattggctgggcatggtggcacccatctgtagtcctaactgctcgggaggctgaggtgggaggattgcttgagtccaggagttcaaggctgcagtgagttgtgatcacancattgcagtccagccaggtt End editing Edited EST: AA365186, type: ag Aligns to: chr19:56890517-56890793 (++) All mismatches: ag (50), ag (69), ag (75), ag (78), ag (91), ag (117), ag (118), ag (125), ag (151), ag (187), ag (227), Editing mismatches: 11, all mismatches: 11, alignment length: 277, cluster length: 178, total number of As: 55 Locations in RNA: 50 69 75 78 91 117 118 125 151 187 227 Locations in genome: 56890566 56890585 56890591 56890594 56890607 56890633 56890634 56890641 56890667 56890703 56890743 Upstream nucleotide (in genome): t c t a t t a g t t c Upstream nucleotide summary: a: 2, c: 2, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): g t t t g a g a g g g Downstream nucleotide summary: a: 2, c: 0, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 0, cc: 0, cg: 1, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 4, tt: 1, other: 0 >chr19:56890517-56890793 (+) gaaatttggtagtaagtcttccagttttgttattttaacaaatttctctaggctgggcatggtggctcatgcctataatcccagcactttaggagccccagacaggaggatcacttaagcgcagaagatcaagaccagcctgggaaatatagcaagaccttatctctacaaaaaaatttagaaattagctgggcatggtggcacccatctgtagtcctaactgctcaggaggctgaggtgggaggattgcttgagtccaggagttcaaggctgcagt >AA365186:1-277 (+) gaaatttggtagtaagtcttccagttttgttattttaacaaatttctctgggctgggcatggtggctcgtgcctgtagtcccagcactttgggagccccagacaggaggatcacttgggcgcaggagatcaagaccagcctgggaaatatggcaagaccttatctctacaaaaaaatttagaaattggctgggcatggtggcacccatctgtagtcctaactgctcgggaggctgaggtgggaggattgcttgagtccaggagttcaaggctgcagt End editing Edited EST: AI051103, type: ag Aligns to: chr19:58587204-58587500 (++) All mismatches: ag (46), ag (84), ag (141), ag (146), ag (151), ag (153), ag (161), ag (192), Editing mismatches: 8, all mismatches: 8, alignment length: 296, cluster length: 147, total number of As: 32 Locations in RNA: 46 84 141 146 151 153 161 192 Locations in genome: 58587250 58587288 58587345 58587350 58587355 58587357 58587365 58587396 Upstream nucleotide (in genome): t t t g t c c t Upstream nucleotide summary: a: 0, c: 2, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): c g g g c g c t Downstream nucleotide summary: a: 0, c: 3, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 2, tg: 2, tt: 1, other: 0 >chr19:58587204-58587500 (+) ctttttctttctttctttttttttttttttaaatccttagggtcttactctgtcacccaggctggagggcagtggtgtgatcatagttctctgtagcctggaactcctgggcttaaacaatcctgccttagcctccttagtagctgagactacaggcatgcaccaccatgcccagctaattttttattttttattaagacaggggcccactatgttgtccaggctggtctcgaactcccagactcaagcaatcctcccaccttggcctcccaaagcacttggattatagtcatgagc >AI051103:1-296 (+) ctttttctttctttc-ttttttttttttttaaatccttagggtcttgctctgtcacccaggctggagggcagtggtgtgatcatggttctctgtagcctggaactcctgggcttaaacaatcctgccttagcctccttagtggctgggactgcgggcatgcgccaccatgcccagctaattttttattttttgttaagacaggggcccactatgttgtccaggctggtctcgaactcccagactcaagcaatcctcccaccttggcctcccaaagcacttggattatagtcatgagc End editing Edited EST: AW629921, type: ga Aligns to: chr19:34663446-34663668 (++) All mismatches: ga (74), ga (100), ga (127), ga (131), ga (140), ga (153), ga (169), ga (190), ga (196), Editing mismatches: 9, all mismatches: 9, alignment length: 223, cluster length: 123, total number of Gs: 40 Locations in RNA: 74 100 127 131 140 153 169 190 196 Locations in genome: 34663519 34663545 34663572 34663576 34663585 34663598 34663614 34663635 34663641 Upstream nucleotide (in genome): c c c a a a c c c Upstream nucleotide summary: a: 3, c: 6, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a c g c c g a a a Downstream nucleotide summary: a: 4, c: 3, g: 2, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 0, ca: 4, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr19:34663446-34663668 (+) ggctgctgtaggcgccgacggagcgagcgggcgtgcggagcgggcgacagtggcgtgggatctgcctctctgcgagcagctgggagcggcggcggcggcgccatgagcgggggcaccccttacatcggcagcaagatcagcctcatctccaaggcggagatccgctacgagggcatcctctacaccatcgacaccgaaaactccaccgtagcccttgccaaag >AW629921:1-223 (+) ggctgctgtaggcgccgacggagcgagcgggcgtgcggagcgggcgacagtggcgtgggatctgcctctctgcaagcagctgggagcggcggcggcggcaccatgagcgggggcaccccttacatcagcaacaagatcaacctcatctccaaagcggagatccgctacaagggcatcctctacaccatcaacaccaaaaactccaccgtagcccttgccaaag End editing Edited EST: F08572, type: ag Aligns to: chr1:29044680-29044989 (++) All mismatches: ag (172), ag (176), ag (230), ag (245), ag (249), ag (253), ag (260), Editing mismatches: 7, all mismatches: 7, alignment length: 310, cluster length: 89, total number of As: 28 Locations in RNA: 172 176 230 245 249 253 260 Locations in genome: 29044851 29044855 29044909 29044924 29044928 29044932 29044939 Upstream nucleotide (in genome): c t a a t c c Upstream nucleotide summary: a: 2, c: 3, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): c g g c g g t Downstream nucleotide summary: a: 0, c: 2, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 0, cc: 1, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr1:29044680-29044989 (+) gtctttctgttcatgcattgaataaacatttttaagaaccatctatgtgccaggctttgtgctaggcactgacagtagagagatgaagacatagtccttgcacttaaggaattcatactccagatgtctggagttaagaaatacatatttcagccaggcatggtggctcacacctagaatcccagcactttcagaagctgaggcagaattgcttgaggccaagagtttaagactagcctggtcaacatagccagaccccatctctataaaaaaatgtaaaaattagtcaagtcttgtggctcgcacttgt >F08572:1-310 (+) gtctttctgttcatgcattgaataaacatttttaagaaccatctatgtgccaggctttgtgctaggcactgacagtagagagatgaagacatagtccttgcacttaaggaattcatactccagatgtctggagttaagaaatacatatttcagccaggcatggtggctcacgcctggaatcccagcactttcagaagctgaggcagaattgcttgaggccaagagtttaggactagcctggtcagcatggccggaccccgtctctataaaaaaatgtaaaaattagtcaagtcttgtggctcgcacttgt End editing Edited EST: DA328244, type: ag Aligns to: chr1:76633376-76633850 (++) All mismatches: ag (17), ag (35), ag (53), ag (62), ag (94), ag (119), ag (139), ag (140), tc (177), ag (200), ag (205), Editing mismatches: 10, all mismatches: 11, alignment length: 476, cluster length: 189, total number of As: 37 Locations in RNA: 17 35 53 62 94 119 139 140 200 205 Locations in genome: 76633392 76633410 76633428 76633437 76633469 76633494 76633514 76633515 76633575 76633580 Upstream nucleotide (in genome): c t a t c t t a t t Upstream nucleotide summary: a: 2, c: 2, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): g t t g t t a t g g Downstream nucleotide summary: a: 1, c: 0, g: 4, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 3, tt: 2, other: 0 >chr1:76633376-76633850 (+) agtttcttcctggttcagtcttgggagggtgtatatgtccagaaatgtatcaatttcttctagattttctagtttatgtgcatagaggtgatcataatattctctgatggttggttgtatttctgtggggtcagtggtaatattccccttgccatttctgattgtgtttattggaatcttctctcttttcttctttattagtttagctagtggtatgtctgttttattaatttttatcaaaaaacagctcctggattcattggtcttttgaatgatttttcatgtctcaattttcttctgctcagctctgattttggttatttcttgtcttctgctagctttgggattgtttgctctagattctctagttctttagttgtgatgttaggttgttaacttgagatcttt-ctaattttttgatgtagtcatttagtgctataaatttccttcttaatactgccttagttgtgtctca >DA328244:1-476 (+) agtttcttcctggttcggtcttgggagggtgtatgtgtccagaaatgtatcagtttcttctggattttctagtttatgtgcatagaggtgatcgtaatattctctgatggttggttgtgtttctgtggggtcagtggtggtattccccttgccatttctgattgtgtttattggaaccttctctcttttcttctttattggtttggctagtggtatgtctgttttattaatttttatcaaaaaacagctcctggattcattggtcttttgaatgatttttcatgtctcaattttcttctgctcagctctgattttggttatttcttgtcttctgctagctttgggattgtttgctctagattctctagttctttagttgtgatgttaggttgttaacttgagatcttttctaattttttgatgtagtcatttagtgctataaatttccttcntaatactgccttagttgtgtctca End editing Edited EST: DB233017, type: ag Aligns to: chr1:161180650-161181115 (++) All mismatches: ag (80), ag (96), ag (133), ag (158), ag (200), ag (238), ag (251), ag (277), Editing mismatches: 8, all mismatches: 8, alignment length: 467, cluster length: 197, total number of As: 37 Locations in RNA: 80 96 133 158 200 238 251 277 Locations in genome: 161180729 161180745 161180782 161180806 161180848 161180886 161180899 161180925 Upstream nucleotide (in genome): a a c c t a c a Upstream nucleotide summary: a: 4, c: 3, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): t c g g g g g a Downstream nucleotide summary: a: 1, c: 1, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 1, ca: 0, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr1:161180650-161181115 (+) tatatggaatcttacttatttttttcttttttgagacggagttttgctcttgttgcccaggttggaatgcaatggtgcaatctcggctcactgcaacctccgcctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgggattac-aggcatgagccaccacgctcagctaatttatgtatttttagtagagacgggatttctccatgttggtcaggctggtctcaagctcctgacctcaggtgatctacccgcctcggcctccaaaattgttgggattataggcgtgagccaccacacccggcctatggcattctttttatctttacattatccttgtcttagatggagctagctttggctgcattttatagctgagaaagctgaggcataaaagttagggattagctgggattattcttcaggagtggtcgagactagaatcctcctgatccag >DB233017:1-467 (+) tatatggaatcttacttatttttttcttttttgagacggagttttgctcttgttgcccaggttggaatgcaatggtgcagtctcggctcactgcagcctccgcctcctgggttcaagtgattctcctgcctcggcctcctgagtagctgggattacngggcatgagccaccacgctcagctaatttatgtatttttagtggagacgggatttctccatgttggtcaggctggtctcaggctcctgacctcgggtgatctacccgcctcggcctccagaattgttgggattataggcgtgagccaccacacccggcctatggcattctttttatctttacattatccttgtcttagatggagctagctttggctgcattttatagctgagaaagctgaggcataaaagttagggattagctgggattattcttcaggagtggncgagactagaatcctcctgatccag End editing Edited EST: DW411041, type: ag Aligns to: chr1:174531702-174532016 (++) All mismatches: ag (177), ag (178), ag (184), ag (198), ag (203), ag (204), ag (207), ag (209), ag (212), ag (213), ag (219), Editing mismatches: 11, all mismatches: 11, alignment length: 315, cluster length: 43, total number of As: 23 Locations in RNA: 177 178 184 198 203 204 207 209 212 213 219 Locations in genome: 174531862 174531863 174531869 174531883 174531888 174531889 174531892 174531894 174531897 174531898 174531904 Upstream nucleotide (in genome): a a c t c a a c a a a Upstream nucleotide summary: a: 7, c: 3, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): a c t a a g c g a a c Downstream nucleotide summary: a: 5, c: 3, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 3, ac: 3, ag: 1, at: 0, ca: 1, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr1:174531702-174532016 (+) attgcggcactattcgcaatagcaaagacttggaaccaacccaaatgtccatcagtgatagactggataaagaaatgtggcacgtatacaccacggaatactatttagccataaaaaaggatgagttcatgtcctttgcaagtacatggatgaaggtggaaaccatcattctcagcaaactaacacaagaacagaaaaccaaacaccgcatgttctcactcgtaagtgggagttgaacagtgagaacacagggacacagggaggagaacatcatacactgggatctgtgaggggctggggggctaggagagggat >DW411041:17-331 (+) attgcggcactattcgcaatagcaaagacttggaaccaacccaaatgtccatcagtgatagactggataaagaaatgtggcacgtatacaccacggaatactatttagccataaaaaaggatgagttcatgtcctttgcaagtacatggatgaaggtggaggccatcgttctcagcaaactgacacgggagcggaggaccaagcaccgcatgttctcactcgtaagtgggagttgaacagtgagaacacagggacacagggaggagaacatcatacactgggatctgtgaggggctggggggctaggagagggat End editing Edited EST: DW435520, type: ag Aligns to: chr1:51458612-51458838 (++) All mismatches: ag (151), ag (169), ag (177), ag (199), ag (200), ag (201), ag (223), ag (237), Editing mismatches: 8, all mismatches: 8, alignment length: 227, cluster length: 87, total number of As: 19 Locations in RNA: 151 169 177 199 200 201 223 237 Locations in genome: 51458734 51458752 51458760 51458782 51458783 51458784 51458806 51458820 Upstream nucleotide (in genome): a c t c a a c t Upstream nucleotide summary: a: 3, c: 3, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g t a a a g g c Downstream nucleotide summary: a: 3, c: 1, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 0, ca: 1, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr1:51458612-51458838 (+) ttttgtctcagttacttaataggcacattagaatttccaggagggggttgatatatatgcagtgttttccaaacttttaaatcacaaagccctcttttcaatgagcaaagattaagacttcaagcctggcattgtggctcatgcctgtaatcccagcattttgggaggccaaagcgggaggattgcttgagtccaggagttcaaggttacagtgagctatgattgtg >DW435520:29-255 (+) ttttgtctcagttacttaataggcacattagaatttccaggagggggttgatatatatgcagtgttttccaaacttttaaatcacaaagccctcttttcaatgagcaaagattaagacttcaggcctggcattgtggctcgtgcctgtgatcccagcattttgggaggccggggcgggaggattgcttgagtccgggagttcaaggttgcagtgagctatgattgtg End editing Edited EST: DW462462, type: ag Aligns to: chr1:27208296-27208647 (++) All mismatches: ag (170), ag (199), ag (208), ag (228), ag (263), ag (266), ag (269), ag (282), ag (306), ag (309), ag (318), Editing mismatches: 11, all mismatches: 11, alignment length: 352, cluster length: 149, total number of As: 44 Locations in RNA: 170 199 208 228 263 266 269 282 306 309 318 Locations in genome: 27208449 27208478 27208487 27208507 27208542 27208545 27208548 27208561 27208585 27208588 27208597 Upstream nucleotide (in genome): t c c a t t a t t t t Upstream nucleotide summary: a: 2, c: 2, g: 0, t: 7, other: 0 Downstream nucleotide (in genome): t g c a c a a g t t c Downstream nucleotide summary: a: 3, c: 3, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 0, ca: 0, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 1, tt: 3, other: 0 >chr1:27208296-27208647 (+) gggaggctgaggtgggagggtaacgagcccaggagttcaaggtcgcagtgagctatgattgcatcactgcactccagcctgggcaaaggagcaagaccctgcctctaagaaataaatataaaagttgcaggccgggcatggtggctcacgcctataatcccagcactttgggaggccaaggcaggtggatcacctgagttcaggagttcgaaaccagcctggccaacatggtaaaacgctgtctctactaaaaatacaaaaaattagctgagcgtggtggcgggcgcctattatcccacttactcgggaggctgaggcaggagaattgcttgaacgtgggagatggaggttg >DW462462:17-368 (+) gggaggctgaggtgggagggtaacgagcccaggagttcaaggtcgcagtgagctatgattgcatcactgcactccagcctgggcaaaggagcaagaccctgcctctaagaaataaatataaaagttgcaggccgggcatggtggctcacgcctgtaatcccagcactttgggaggccaaggcgggtggatcgcctgagttcaggagttcgagaccagcctggccaacatggtaaaacgctgtctctgctgaagatacaaaaaattggctgagcgtggtggcgggcgcctgttgtcccacttgctcgggaggctgaggcaggagaattgcttgaacgtgggagatggaggttg End editing Edited EST: BG897426, type: ag Aligns to: chr1:27122775-27123098 (++) All mismatches: ag (100), ag (110), ag (116), ag (136), ag (137), ag (246), Editing mismatches: 6, all mismatches: 6, alignment length: 324, cluster length: 147, total number of As: 29 Locations in RNA: 100 110 116 136 137 246 Locations in genome: 27122789 27122799 27122805 27122825 27122826 27122935 Upstream nucleotide (in genome): t t c t a t Upstream nucleotide summary: a: 1, c: 1, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g c c a t g Downstream nucleotide summary: a: 1, c: 2, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr1:27122775-27123098 (+) tcagcctcccgagtagctgggactacaggcacctgccaccatgcctggctaattttttgtatttttagtagagacgggatttcaccgtgtgagccaggatggtctggatctcctgacctcgtgatccacccgccttggcctcccaaagtgttgggattataggcacgagccactgcgcccagcaagatttttttttttaaagctcagataaagtattatggaggcgaagaagtaggtaactcactggagtacttgagaaaggcatcatatttcagctgggtcctgaagaatgagattttccatataagaagcagaggaggaaca >BG897426:86-409 (+) tcagcctcccgagtggctgggactgcaggcgcctgccaccatgcctggctggttttttgtatttttagtagagacgggatttcaccgtgtgagccaggatggtctggatctcctgacctcgtgatccacccgccttggcctcccaaagtgttgggattatgggcacgagccactgcgcccagcaagatttttttttttaaagctcagataaagtattatggaggcgaagaagtaggtaactcactggagtacttgagaaaggcatcatatttcagctgggtcctgaagaatgagattttccatataagaagcagaggaggaaca End editing Edited EST: AW238959, type: ga Aligns to: chr1:151234636-151234777 (++) All mismatches: ga (64), ga (80), ga (115), ga (126), ga (137), ga (138), ga (139), ga (152), ga (153), Editing mismatches: 9, all mismatches: 9, alignment length: 142, cluster length: 90, total number of Gs: 23 Locations in RNA: 64 80 115 126 137 138 139 152 153 Locations in genome: 151234684 151234700 151234735 151234746 151234757 151234758 151234759 151234772 151234773 Upstream nucleotide (in genome): a a c t t g g t g Upstream nucleotide summary: a: 2, c: 1, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): g g c a g g c g c Downstream nucleotide summary: a: 1, c: 3, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 0, cc: 1, cg: 0, ct: 0, ga: 0, gc: 2, gg: 1, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 0 >chr1:151234636-151234777 (+) gtgtggacaacagtgagtatatgcggaatggagacttcttacccaccaggctgcaggcccagcaggatgctgtcaacatagtttgtcattcaaagacccgcagcaaccctgagaacaacgtgggccttatcacactggctaa >AW238959:16-157 (+) gtgtggacaacagtgagtatatgcggaatggagacttcttacccaccaagctgcaggcccancaagatgctgtcaacatagtttgtcattcaaagacccacagcaaccctaagaacaacgtaaaccttatcacactaactaa End editing Edited EST: BE880015, type: ag Aligns to: chr1:213070112-213070242 (++) All mismatches: ag (116), ag (117), ag (118), ag (121), ag (127), Editing mismatches: 5, all mismatches: 5, alignment length: 128, cluster length: 14, total number of As: 5 Locations in RNA: 116 117 118 121 127 Locations in genome: 213070228 213070229 213070230 213070235 213070241 Upstream nucleotide (in genome): a a a c c Upstream nucleotide summary: a: 3, c: 2, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a g g g Downstream nucleotide summary: a: 2, c: 0, g: 3, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr1:213070112-213070242 (+) cactttgggaggctgaagcgtgtggatcacctgaggtcaggagttcaagaccagcctggccaacatggtaaaaccccatctctactaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggccaggcgcag >BE880015:1-128 (+) cac-ttgggaggctgaagcgtgtggatcacctgaggtcaggagttcaagaccagcctggccaacatggtaaaaccccatctctactaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaggg--ccgggcgcgg End editing Edited EST: AA323079, type: ag Aligns to: chr1:24761983-24762275 (++) All mismatches: ag (26), ag (29), ag (36), ag (41), ag (46), ag (49), ag (53), Editing mismatches: 7, all mismatches: 7, alignment length: 294, cluster length: 28, total number of As: 13 Locations in RNA: 26 29 36 41 46 49 53 Locations in genome: 24762008 24762011 24762018 24762023 24762028 24762031 24762035 Upstream nucleotide (in genome): t a t c t c a Upstream nucleotide summary: a: 2, c: 2, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): t c g g a c c Downstream nucleotide summary: a: 1, c: 3, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 0, ca: 0, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 1, other: 0 >chr1:24761983-24762275 (+) aggatgacaattaacaccttaatttataacaatctagttcagattaacaccaacttaattttagtagtacatgaaatgtcgcacctatatagctccatctctctcccccacccatgatgctattgtcacaaaatatgacaccaaaagcataaacaacaaaacaatagatagattagacttcatcaaaatttaaaacttttctgcatcaaaggtagaagtctagcctctctgtgtggtctccgttgacaccatggggaggaggacaccttgccactggctccctgctt-agcctt >AA323079:1-294 (+) aggatgacaattaacaccttaatttgtagcaatctggttcggattgacgccagcttaattttagtagtacatgaaatgtcgcacctatatagctccatctntctcccccacccatgatgctattgtcacaaaatatgacaccaaaagcataaacaacaaaacaatagatagattagacttcatcaaaatttaaaacttttctgcatcaaaggtagaagtctagcctctctgtgtggtctccgttgacaccatggggaggaggacaccttgccactggctccctgctttagcctt End editing Edited EST: AA578011, type: ag Aligns to: chr1:150626687-150626995 (++) All mismatches: ag (118), ag (124), ag (178), ag (188), ag (225), ag (241), ag (252), ag (260), Editing mismatches: 8, all mismatches: 8, alignment length: 309, cluster length: 143, total number of As: 40 Locations in RNA: 118 124 178 188 225 241 252 260 Locations in genome: 150626801 150626807 150626861 150626871 150626908 150626924 150626935 150626943 Upstream nucleotide (in genome): t a t t t c g c Upstream nucleotide summary: a: 1, c: 2, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g c a c g g t c Downstream nucleotide summary: a: 1, c: 3, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 0, ca: 0, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr1:150626687-150626995 (+) aaatatactaggggggctgggcatggtggctcattcctgtaatcccagcactttgggaggccaaggtgggtgagtcacttgaggtcaggagttcaagaccagcctggccagtatagggaaaccctatctctactgaaaatacaaaaattagctagtgtggtggtgggagcctgtaatccctgctactcgggaggctgaggcagggagaagtgcttgaacctaggaggcagaggttgcagcgagccaagattgtgccactgcactccagcctgggaggcagagcaagacattccgtttaaaaaaaaaaaa >AA578011:4-312 (+) aaatatactaggggggctgggcatggtggctcattcctgtaatcccagcactttgggaggccaaggtgggtgagtcacttgaggtcaggagttcaagaccagcctggccagtatggggaagccctatctctactgaaaatacaaaaattagctagtgtggtggtgggagcctgtgatccctgctgctcgggaggctgaggcagggagaagtgcttgaacctgggaggcagaggttgcggcgagccaaggttgtgccgctgcactccagcctgggaggcagagcaagacattccgtttaaaaaaaaaaaa End editing Edited EST: AA714585, type: ag Aligns to: chr1:223922736-223923133 (++) All mismatches: ag (250), ag (328), ag (334), ag (339), ag (346), ag (379), ag (388), ag (392), Editing mismatches: 8, all mismatches: 8, alignment length: 397, cluster length: 144, total number of As: 38 Locations in RNA: 250 328 334 339 346 379 388 392 Locations in genome: 223922980 223923059 223923065 223923070 223923077 223923110 223923119 223923123 Upstream nucleotide (in genome): c c t a a a t c Upstream nucleotide summary: a: 3, c: 3, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g t c a a t c g Downstream nucleotide summary: a: 2, c: 2, g: 2, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 0, tt: 0, other: 0 >chr1:223922736-223923133 (+) tgcacaaaacatttggggttccaggtctctaaagcccatccatggaaccccggtttcccttctctcacgtgatcctaacaacctgccgaggatacacctcatcatgatcctcctttcacagctgagaacacaccagcttagagaaattaagaagtgtatccaagctcacacaatcttaagtggccagatcaggaccaaaatccaggtcctctggctgggcgcagtggctcatgcatgtaatcccagctctttgggtggccaaggcgggtggatcacctgaggtcaggagttcaagaccagcttggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggcatggtggtgggcgcctgtaatcccagctactcaggaggctgag >AA714585:6-402 (+) tgcacaaaacatttggggttccaggtctctaaagcccatccatggaaccccggtttcccttctctcacgtgatcctaacaacctgccgaggatacacctcatcatgatcctcctttcacagctgagaacacaccagcttagagaaattaagaagtgtatccaagctcacacaatcttaagtggccagatcaggaccaaaatccaggtcctctggctgggcgcagtggctcatgcatgtaatcccggctctttgggtggccaaggcgggtggatcacctgaggtcaggagttcaagaccagcttggccaacatggtgaaaccc-gtctctgctaagaatacagaaattagctgggcatggtggtgggcgcctgtagtcccagctgctcgggaggctgag End editing Edited EST: AV760477, type: ga Aligns to: chr1:198707912-198708298 (++) All mismatches: ga (372), ga (376), ga (379), ga (380), ga (383), ga (385), ga (386), Editing mismatches: 7, all mismatches: 7, alignment length: 387, cluster length: 15, total number of Gs: 7 Locations in RNA: 372 376 379 380 383 385 386 Locations in genome: 198708283 198708287 198708290 198708291 198708294 198708296 198708297 Upstream nucleotide (in genome): a a a g a a g Upstream nucleotide summary: a: 5, c: 0, g: 2, t: 0, other: 0 Downstream nucleotide (in genome): a a g a a g a Downstream nucleotide summary: a: 5, c: 0, g: 2, t: 0, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 2, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr1:198707912-198708298 (+) cttttctttgctgggaaacttttcatgacaacctccgtttcattacttgttgtctgttcaggttttgggtaccaaaaataatggcaacaacaacttttcaagacatggagagcaaaataacacatgaattgaaacaagaaaatggcaaaatgtggaggaatgaagttaaaatatagcattttcattatattacactttgcttgttagtttgtttacacaatgtctgttgtcttcagtgtaaaataatgcattataagatatgataaccccaaatccaaaagcattcaacagatacataaaaataaaaagcaagaaattaaaacagaccaccagagaaaatcaccttcacttaaaggaagacaggaagaaaagaaagaaggaagagga >AV760477:1-387 (+) cttttctttgctgggaaacttttcatgacaacctccgtttcattacttgttgtctgttcaggttttgggtaccaaaaataatggcaacaacaacttttcaagacatggagagcaaaataacacatgaattgaaacaagaaaatggcaaaatgtggaggaatgaagttaaaatatagcattttcattatattacactttgcttgttagtttgtttacacaatgtctgttgtcttcagtgtaaaataatgcattataagatatgataaccccaaatccaaaagcattcaacagatacataaaaataaaaagcaagaaattaaaacagaccaccagagaaaatcaccttcacttaaaggaagacaggaagaaaaaaaaaaaaaaaaaaaa End editing Edited EST: DA232083, type: ag Aligns to: chr20:17966403-17966909 (++) All mismatches: ag (380), ag (404), ag (414), ag (415), ag (440), ag (466), ag (485), ag (494), Editing mismatches: 8, all mismatches: 8, alignment length: 508, cluster length: 115, total number of As: 24 Locations in RNA: 380 404 414 415 440 466 485 494 Locations in genome: 17966781 17966805 17966815 17966816 17966841 17966867 17966886 17966895 Upstream nucleotide (in genome): c c t a t c t t Upstream nucleotide summary: a: 1, c: 3, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g g a t g c t g Downstream nucleotide summary: a: 1, c: 1, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 2, tt: 1, other: 0 >chr20:17966403-17966909 (+) attcagtacagtaacatgctgtacaggtttgtagcctaggagcaaaggtctgggtgtgtagtaggctatcctacctaggtttgtgtaatatactctatgtttgcacaatgacaaaattgcctaaccatgcatttctcaggacatatccctgtcattaagctacacatgactgtactttgaaatcaggcagtgtgatgcctccgacttcattcttttcactcaagattgctttggctattcggagtcttttgtggttccgtgttaattttagga-tttttttttttctatttctgtgaaaaatgatgttggaatttttttttctttttgagacagagtttcacccttgtcgcccaggctgcagtgcaatggcacagtctcagctcactgcaacttctgcctcccaggttcaagtaattctcctgcctcagcctcccgagtagctgggattacaggggcacatcaccacgcctggctaatttttgtatttttagtagagacgaggtttca >DA232083:1-508 (+) attcagtacagtaacatgctgtacaggtttgtagcctaggagcaaaggtctgggtgtgtagtaggctatcctacctaggtttgtgtaatatactctatgtttgcacaatgacaaaattgcctaaccatgcatttctcaggacatatccctgtcattaagctacacatgactgtactttgaaatcaggcagtgtgatgcctccgacttcattcttttcactcaagattgctttggctattcggagtcttttgtggttccgtgttaattttaggattttttttttttctatttctgtgaaaaatgatgttggaatttttttttctttttgagacagagtttcacccttgtcgcccaggctgcagtgcaatggcacagtctcggctcactgcaacttctgcctcccgggttcaagtggttctcctgcctcagcctcccgagtggctgggattacaggggcacatcaccgcgcctggctaatttttgtgtttttagtggagacgaggtttca End editing Edited EST: DA932579, type: ag Aligns to: chr20:30612376-30612523 (++) All mismatches: ag (218), ag (224), ag (227), ag (229), ag (268), ag (274), Editing mismatches: 6, all mismatches: 6, alignment length: 148, cluster length: 57, total number of As: 21 Locations in RNA: 218 224 227 229 268 274 Locations in genome: 30612459 30612465 30612468 30612470 30612509 30612515 Upstream nucleotide (in genome): c t t a t c Upstream nucleotide summary: a: 1, c: 2, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): t c a a a a Downstream nucleotide summary: a: 4, c: 1, g: 0, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 1, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr20:30612376-30612523 (+) tcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagttcgagactagcctggccaacatggtgaaaacccatctctactaaaaatacaaaaattagctgggcatggtagcaggcacctgtaatcccaactactcg >DA932579:135-282 (+) tcccagcactttgggaggccaaggcaggtggatcacctgaggtcaggagttcgagactagcctggccaacatggtgaaaacccgtctctgctgagaatacaaaaattagctgggcatggtagcaggcacctgtgatcccgactactcg End editing Edited EST: AL709584, type: ag Aligns to: chr20:48815769-48816052 (++) All mismatches: ag (13), ag (20), ag (36), ag (47), ag (52), ag (78), ag (92), Editing mismatches: 7, all mismatches: 7, alignment length: 284, cluster length: 80, total number of As: 17 Locations in RNA: 13 20 36 47 52 78 92 Locations in genome: 48815781 48815788 48815804 48815815 48815820 48815846 48815860 Upstream nucleotide (in genome): a t c c c t c Upstream nucleotide summary: a: 1, c: 4, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): c a g c c g c Downstream nucleotide summary: a: 1, c: 4, g: 2, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 0, ca: 0, cc: 3, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr20:48815769-48816052 (+) tctcctgcctcaacctcctaagtagctgggattacaggtgcccgccaccacacccggctaatttttgtatttttggtagagattgggtttcaccatgttgtccaggctggtctcgaactgacctcgtgatctgcccgcctcagcctcccaaagcgctgggattataggcgtgagccaccgcgcctggcccaaatccaccattttctagctctgtagtttgaggcaagtgaatgcatcttgctggacctcagttcccccatctgtaataagaagatcataaaatt >AL709584:1-284 (+) tctcctgcctcagcctcctgagtagctgggattacgggtgcccgccgccacgcccggctaatttttgtatttttggtggagattgggtttcgccatgttgtccaggctggtctcgaactgacctcgtgatctgcccgcctcagcctcccaaagcgctgggattataggcgtgagccaccgcgcctggcccaaatccaccattttctagctctgtagtttgaggcaagtgaatgcatcttgctggacctcagttcccccatctgtaataagaagatcataaaatt End editing Edited EST: C18853, type: ag Aligns to: chr21:19283372-19283654 (++) All mismatches: ag (60), ag (65), ag (67), ag (97), ag (99), ag (127), ag (130), ag (132), ag (137), ag (243), Editing mismatches: 10, all mismatches: 10, alignment length: 282, cluster length: 185, total number of As: 50 Locations in RNA: 60 65 67 97 99 127 130 132 137 243 Locations in genome: 19283431 19283436 19283438 19283468 19283470 19283498 19283501 19283503 19283508 19283615 Upstream nucleotide (in genome): c c c a c t a a t c Upstream nucleotide summary: a: 3, c: 5, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g c a c c c a a g c Downstream nucleotide summary: a: 3, c: 5, g: 2, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 0, ca: 1, cc: 3, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr21:19283372-19283654 (+) gagagttttaatctacagaaatgggcagatgctcagcactttgggaggccaaggtgggcagatcacaaggtcaggagatcgataccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgtggtggcgggcgcctgtagtcccagctgctcgggaggctgaggcaggagaatggagtgaacccgagaggtggagcttgcagtgagccgagattgcgccactgcactccagcctgggcgacagagcaagactccgtctc >C18853:1-282 (+) gagagttttaatctacagaaatgggcagatgctcagcactttgggaggccaaggtgggcggatcgcgaggtcaggagatcgataccatcctggctagcgcggtgaaaccccgtctctactaaaaatgcagagaattggccgggcgtggtggcgggcgcctgtagtcccagctgctcgggaggctgaggcaggagaatggagtga-cccgagaggtggagcttgcagtgagccgagattgcgccgctgcactccagcctgggcgacagagcaagactccgtctc End editing Edited EST: DW435770, type: ag Aligns to: chr22:21935853-21936099 (++) All mismatches: ag (14), ag (16), ag (26), ag (31), ag (69), ag (91), ag (125), ag (126), ag (152), ag (201), tc (243), Editing mismatches: 10, all mismatches: 11, alignment length: 245, cluster length: 189, total number of As: 50 Locations in RNA: 14 16 26 31 69 91 125 126 152 201 Locations in genome: 21935858 21935860 21935871 21935876 21935914 21935936 21935970 21935971 21935997 21936046 Upstream nucleotide (in genome): t g c g a t t a c c Upstream nucleotide summary: a: 2, c: 3, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g t c g a c a t g c Downstream nucleotide summary: a: 2, c: 3, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 1, ca: 0, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 1, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr22:21935853-21936099 (+) ggcctagatgggcagatcacctgaggtcgggagttcgagaccagcctgaccaacatgaataaacccctgactctactgaaaatacaaaattagccgggcatggtggcgggcgcctgtaatcccagctgctcgggagtctgaggcaggagaatcacttgaacctgggaggcgggggttgtggtgagccaagatcacaacattgcactccaacctgggcaacaatagtgtaactgtctcaaaaaaaaaa >DW435770:10-254 (+) ggcc-ggg-gggcagatcgcctggggtcgggagttcgagaccagcctgaccaacatgaatagacccctgactctactgaaaatgcaaaattagccgggcatggtggcgggcgcctgtggtcccagctgctcgggagtctgaggcgggagaatcacttgaacctgggaggcgggggttgtggtgagccaagatcgcaacattgcactccaacctgggcaacaatagtgtaactgtcccaaaaaaaaaa End editing Edited EST: BM701663, type: ag Aligns to: chr22:50849219-50849481 (++) All mismatches: ag (32), ag (33), ag (73), ag (89), ag (107), ag (108), ag (125), ag (174), ag (208), ag (268), Editing mismatches: 10, all mismatches: 10, alignment length: 263, cluster length: 237, total number of As: 42 Locations in RNA: 32 33 73 89 107 108 125 174 208 268 Locations in genome: 50849245 50849246 50849286 50849302 50849320 50849321 50849338 50849387 50849421 50849481 Upstream nucleotide (in genome): a a a a c a c a c a Upstream nucleotide summary: a: 7, c: 3, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a g t c a g g t t n Downstream nucleotide summary: a: 2, c: 1, g: 3, t: 3, other: 1 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 2, ca: 1, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr22:50849219-50849481 (+) ttttgtttttgttttcgtttgagacaaagtctcccttttgtctcccaggctggagtgcaggggcacaatctcggctcactgcaacctccgccccctggttcaagtgattctcctgcctcagcctcccgcgtagccaggattacaggtgcctgcccccatgacccgctaatttttgtatttttagtagagatggggtttcaccatgttggcaaggcagtcttgaactcctgacctcaggtgatccaccggccttggcctcccaa >BM701663:6-268 (+) ttttgtttttgttttcgtttgagacagggtctcccttttgtctcccaggctggagtgcaggggcacagtctcggctcactgcagcctccgccccctggttcgggtgattctcctgcctcggcctcccgcgtagccaggattacaggtgcctgcccccatgacccgctagtttttgtatttttagtagagatggggtttcaccgtgttggcaaggcagtcttgaactcctgacctcaggtgatccaccggccttggnctcccag End editing Edited EST: F06776, type: ag Aligns to: chr2:113248489-113248807 (++) All mismatches: ag (150), ag (155), ag (184), ag (185), ag (198), ag (220), ag (238), ag (262), ag (287), ag (291), Editing mismatches: 10, all mismatches: 10, alignment length: 319, cluster length: 142, total number of As: 31 Locations in RNA: 150 155 184 185 198 220 238 262 287 291 Locations in genome: 113248638 113248643 113248672 113248673 113248686 113248708 113248726 113248750 113248775 113248779 Upstream nucleotide (in genome): c c c a c t c t t c Upstream nucleotide summary: a: 1, c: 6, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g c a t g c c g g g Downstream nucleotide summary: a: 1, c: 3, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 1, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr2:113248489-113248807 (+) ctgtcatgatagaaagaaattttttgcatgtaggtaaaattctgtgacagatgtaagagattttaaaatatctatactatgagtttgcgtgtgtgtgtgtgttggagtctcactctgtcacccaggttggagtacagtggcacgatctcagctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcatcccgagtagctgggactacaggcaactgccaccacacccggctaattttttgtatttttagtagagatagggtttcaccgcgttagccaggatggtcttgatctactgaccttgtga >F06776:1-319 (+) ctgtcatgatagaaagaaattttttgcatgnaggtaaaattctgtgacagatgtaagagattttaaaatatctatactatgagtttgcgtgtgtgtgtgtgttggagtctcactctgtcacccaggttggagtacagtggcacgatctcggctcgctgcaacctccgcctcccgggttcaagcggttctcctgcctcggcatcccgagtagctgggnctgcaggnaactgncaccacgcccggctaattttttgtatttttggtagagatagggtttcaccgcgttggccgggatggtcttgatctactgaccttgtga End editing Edited EST: R19011, type: ag Aligns to: chr2:113248496-113248810 (++) All mismatches: ag (143), ag (148), ag (177), ag (178), ag (191), ag (213), ag (231), ag (255), ag (280), ag (284), ag (287), tg (310), Editing mismatches: 11, all mismatches: 12, alignment length: 317, cluster length: 145, total number of As: 32 Locations in RNA: 143 148 177 178 191 213 231 255 280 284 287 Locations in genome: 113248638 113248643 113248672 113248673 113248686 113248708 113248726 113248750 113248775 113248779 113248782 Upstream nucleotide (in genome): c c c a c t c t t c g Upstream nucleotide summary: a: 1, c: 6, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g c a t g c c g g g t Downstream nucleotide summary: a: 1, c: 3, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 1, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr2:113248496-113248810 (+) gatagaaagaaattttttgcatgtaggtaaaattctgtgacagatgtaagagattttaaaatatctatactatgagtttgcgtgtgtgtgtgtgttggagtctcactctgtcacccaggttggagtacagtggcacgatctcagctcactgcaacctccgcctcccgggttcaagcaattctcctgcctcagcatcccgagtagctgggactacaggcaactgccaccacacccggctaattttttgtatttttagtagagatagggtttcaccgcgttagccagga-tggtcttgatctact-gaccttgtgatcc >R19011:1-317 (+) gatagaaagaaattttttncatgtaggtaaaattctgtgacagatgtaagagattttaaaatatctatactatgagtttgcgtgtgtgtgtgtgttggagtctcactctgtcacccaggttggagtacagtggcacgatctcggctcgctgcaacctccgcctcccgggttcaagcggttctcctgcctcggcatcccgagtagctgggnctgcaggcaactgccaccacgnccggctaatnttttgtnttnttggtagagatagggtttcaccgcgttggccggggatggtcttgatctacttgacctggtgatcc End editing Edited EST: DW466698, type: ga Aligns to: chr2:241999053-241999363 (++) All mismatches: at (125), ga (299), ga (304), ga (305), ga (313), ga (314), ga (317), ga (318), ga (322), ga (323), ga (326), Editing mismatches: 10, all mismatches: 11, alignment length: 310, cluster length: 29, total number of Gs: 10 Locations in RNA: 299 304 305 313 314 317 318 322 323 326 Locations in genome: 241999335 241999340 241999341 241999350 241999351 241999354 241999355 241999359 241999360 241999363 Upstream nucleotide (in genome): a a g a g a g a g a Upstream nucleotide summary: a: 6, c: 0, g: 4, t: 0, other: 0 Downstream nucleotide (in genome): a g a g a g a g a n Downstream nucleotide summary: a: 5, c: 0, g: 4, t: 0, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 4, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 4, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr2:241999053-241999363 (+) gtcaatcaatgtacttcatcatattaggagatgaaagagaaaactatatatctcaatagatgcaggaaattatttgacaaattcaactggtatttaaaattcttagtcaactaagagtagaagataatttcctcaacctgataaaggacatccattaaaaacctcagctaccagtgtactcagtggtgaaagactccacctggaatccgtacaaggcaaggtgtccattcagtacgtattcccagcattttcctggaggccctagacagtgccagatgacaagaaaaggaaataaaaggaaggaaaggaag >DW466698:17-326 (+) gtcaatcaatgtacttcatcatattaggagatgaaagagaaaactatatatctcaatagatgcaggaaattatttgacaaattcaactggtatttaaaattcttagtctactaagagtagaagataatttcctcaacctgataaaggacatccattaaaaacctcagctaccagtgtactcagtggtgaaagactccacctggaatccgtacaaggcaaggtgtccattcagtacgtattcccagcattttcctggaggccctagacagtgccagatgacaaaaaaaaaaaa-aaaaaaaaaaaaaaaaaa End editing Edited EST: BQ956646, type: ga Aligns to: chr2:216312997-216313212 (++) All mismatches: ga (206), ga (207), ga (212), ga (213), ga (214), ga (215), ga (217), Editing mismatches: 7, all mismatches: 7, alignment length: 213, cluster length: 15, total number of Gs: 7 Locations in RNA: 206 207 212 213 214 215 217 Locations in genome: 216313197 216313198 216313205 216313206 216313208 216313209 216313211 Upstream nucleotide (in genome): a g a g t g a Upstream nucleotide summary: a: 3, c: 0, g: 3, t: 1, other: 0 Downstream nucleotide (in genome): g a g t g a a Downstream nucleotide summary: a: 3, c: 0, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 2, gc: 0, gg: 0, gt: 1, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr2:216312997-216313212 (+) ttgaggtaatcttttaaaaggacattttggcaatatttaaaatgcacgaacctaagacacagtagactgaacacaagcatttcctctacaccctcctgaaatcacacctatagttcagagatgaaaacaatttaaacctacaagaataaagagaataagaaaggagacagtagatgagagacaacaacattttggaaaaaggaacacaggtggaga >BQ956646:6-218 (+) ttgaggtaatcttttaaaaggacattttggcaatatttaaaatgcacgaacctaagacacagtagactgaacacaagcatttcctctacaccctcctgaaatcacacctatagttcagagatgaaaacaatttaaacctacaagaataaagagaataagaaaggagacagtagatgagagacaacaacattttggaaaaaaaa-c-caaa-aaaaa End editing Edited EST: BF994629, type: ag Aligns to: chr2:32294119-32294280 (++) All mismatches: ag (107), ag (108), ag (117), ag (118), ag (122), Editing mismatches: 5, all mismatches: 5, alignment length: 162, cluster length: 16, total number of As: 12 Locations in RNA: 107 108 117 118 122 Locations in genome: 32294120 32294121 32294130 32294131 32294135 Upstream nucleotide (in genome): t a a a t Upstream nucleotide summary: a: 3, c: 0, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): a a a a g Downstream nucleotide summary: a: 4, c: 0, g: 1, t: 0, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr2:32294119-32294280 (+) taaaaatacaaaaattagctgggcatagtggtgcacgcctgtagtcccgggtacttgggacgctgacgcaggacaattgcttgaactccagaggtggagattgcggtgggccaagatcacgccactgcacgccagcctgggcaacagagcaagactccatct >BF994629:106-267 (+) tggaaatacaaggattggctgggcatagtggtgcacgcctgtagtcccgggtacttgggacgctgacgcaggacaattgcttgaactccagaggtggagattgcggtgggccaagatcacgccactgcacgccagcctgggcaacagagcaagactccatct End editing Edited EST: AA830132, type: ag Aligns to: chr2:219102376-219102817 (++) All mismatches: ag (14), ag (18), ag (40), ag (48), ag (54), ag (97), ag (103), ag (149), Editing mismatches: 8, all mismatches: 8, alignment length: 441, cluster length: 137, total number of As: 32 Locations in RNA: 14 18 40 48 54 97 103 149 Locations in genome: 219102389 219102393 219102415 219102423 219102429 219102473 219102479 219102525 Upstream nucleotide (in genome): c c c t t t c c Upstream nucleotide summary: a: 0, c: 5, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): a a a g c g g g Downstream nucleotide summary: a: 3, c: 1, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 3, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr2:219102376-219102817 (+) acctcctgggttcaagcaattctcctgcctcagcctcccaagtagctaggattacaggcgcccgccaccatgcctggctaatatttgtgattttagtagagacagggttttgccatgttggccagactgctctcaaaactcctgacctcaggtgatctgcccaccttggcctcccaaaatgctgggattacaggtgtgagccaccacacccagcagtttttttaaggtcacaaaatgacaagactaggatttggacccagttctgttcgactcaaaatagagtgccctacacttatgtgtcatgctgcatttggcaagtcacgtcacttctttgaatctccttttccctctgcaaaacagtaaccttatctagcctgcagacttcaaaggtggttatggagatcaaatgaagtaaaatgttttaaaaattgtacaatatata >AA830132:1-441 (+) acctcctgggttcgagcgattctcctgcctcagcctcccgagtagctgggattgcaggcgcccg-caccatgcctggctaatatttgtgattttagtggagacggggttttgccatgttggccagactgctctcaaaactcctgacctcgggtgatctgcccaccttggcctcccaaaatgctgggattacaggtgtgagccaccacacccagcagtttttttaaggtcacaaaatgacaagactaggatttggacccagttctgttcgactcaaaatagagtgccctacacttatgtgtcatgctgcatttggcaagtcacgtcacttctttgaatctccttttccctctgcaaaacagtaaccttatctagcctgcagacttcaaaggtggttatggagatcaaatgaagtaaaatgttttaaaaattgtacaatatata End editing Edited EST: AV761185, type: ag Aligns to: chr2:238673630-238673922 (++) All mismatches: ct (25), ag (222), ag (278), ag (279), ag (282), ag (287), ag (288), ag (290), ag (291), ag (292), ag (294), ag (295), Editing mismatches: 11, all mismatches: 12, alignment length: 296, cluster length: 71, total number of As: 34 Locations in RNA: 222 278 279 282 287 288 290 291 292 294 295 Locations in genome: 238673851 238673907 238673908 238673911 238673914 238673915 238673916 238673917 238673918 238673920 238673921 Upstream nucleotide (in genome): g a a a a a a a a a a Upstream nucleotide summary: a: 10, c: 0, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): g a a a a a a a a a a Downstream nucleotide summary: a: 10, c: 0, g: 1, t: 0, other: 0 Dinucleotide summary: aa: 10, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr2:238673630-238673922 (+) cgtggtggctcatgcctgtaatctcagtacattgggaggccaaggcaggtggatcacctgaggtcaagagttcgaggccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaaattggccgggcgtgatggtgggcgcctgtaatcccagccactccagaggctgaggcaggagaatcgcttgaacctgcgaggcagagattgcagtgagccaagatcaagccattgtactccagcctggacaacaagagcgaaactctgtctaaaaaa--aaaa-aaaaaaa >AV761185:1-296 (+) cgtggtggctcatgcctgtaatcttagtacattgggaggccaaggcaggtggatcacctgaggtcaagagttcgaggccagcctggccaacatggtgaaaccctgtctctactaaaaatacaaaaaattggccgggcgtgatggtgggcgcctgtaatcccagccactccagaggctgaggcaggagaatcgcttgaacctgcgaggcagagattgcagtgggccaagatcaagccattgtactccagcctggacaacaagagcgaaactctgtctaggaagccaaggtgggagga End editing Edited EST: F05327, type: ag Aligns to: chr3:152887167-152887426 (++) All mismatches: ag (224), ag (234), ag (235), ag (243), ag (252), Editing mismatches: 5, all mismatches: 5, alignment length: 260, cluster length: 29, total number of As: 6 Locations in RNA: 224 234 235 243 252 Locations in genome: 152887390 152887400 152887401 152887409 152887418 Upstream nucleotide (in genome): c t a t t Upstream nucleotide summary: a: 1, c: 1, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): c a t t g Downstream nucleotide summary: a: 1, c: 1, g: 1, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 1, other: 0 >chr3:152887167-152887426 (+) gaactcctgaccttgtgatctgcccaccttggcttcccaaagtgctgggattacaggtgtgagccaccgcacccagccttttttttgaaatggagtctggctctgtcgcccaggctggagtgcaatggcgcgatctcggctcactgcaacctctgcctcccaggttcaagcgattagcctgcctcatcctcctgagtagctgggattacaggcgtgcaccaccacgcccgcctaatttttgtatttttagtagagatggg >F05327:1-260 (+) gaactcctgaccttgtgatctgcccaccttggcttcccaaagtgctgggnttacaggtgtgagccaccgcacccagccttttttttgaaatggagtctggctctgtcgcccaggctggagtgcaatggcgcgatctcggctcactgcaacctctgcctcccaggttcaagcgattagcctgcctcatcctcctgagtagctgggattacaggcgtgcaccaccgcgcccgcctggtttttgtgtttttagtggagatggg End editing Edited EST: F08199, type: ag Aligns to: chr3:152887167-152887441 (++) All mismatches: ag (225), ag (235), ag (236), ag (244), ag (253), Editing mismatches: 5, all mismatches: 5, alignment length: 275, cluster length: 29, total number of As: 6 Locations in RNA: 225 235 236 244 253 Locations in genome: 152887390 152887400 152887401 152887409 152887418 Upstream nucleotide (in genome): c t a t t Upstream nucleotide summary: a: 1, c: 1, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): c a t t g Downstream nucleotide summary: a: 1, c: 1, g: 1, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 1, other: 0 >chr3:152887167-152887441 (+) gaactcctgaccttgtgatctgcccaccttggcttcccaaagtgctgggattacaggtgtgagccaccgcacccagccttttttttgaaatggagtctggctctgtcgcccaggctggagtgcaatggcgcgatctcggctcactgcaacctctgcctcccaggttcaagcgattagcctgcctcatcctcctgagtagctgggattacaggcgtgcaccaccacgcccgcctaatttttgtatttttagtagagatggggtttcactacgttgg >F08199:2-276 (+) gaactcctgaccttgtgatctgcccaccttggcttcccaaagtnctgggattacaggtgtgagccaccgcacccagccttttttttgaaatggagtctggctctgtcgcccaggctggagtgcaatggcgcgatctcggctcactgcaacctctgcctcccaggttcaagcgattagcctgcctcatcctcctgagtagctgggattacaggcgtgcaccaccgcgcccgcctggtttttgtgtttttagtggagatggggtttcactacgttgg End editing Edited EST: DA151363, type: ag Aligns to: chr3:121668138-121668402 (++) All mismatches: ag (95), ag (97), ag (109), ag (120), ag (201), ag (206), ag (216), ag (242), ag (243), ag (248), ag (252), Editing mismatches: 11, all mismatches: 11, alignment length: 265, cluster length: 158, total number of As: 50 Locations in RNA: 95 97 109 120 201 206 216 242 243 248 252 Locations in genome: 121668232 121668234 121668246 121668257 121668338 121668343 121668353 121668379 121668380 121668385 121668389 Upstream nucleotide (in genome): c c c g a t t t a c t Upstream nucleotide summary: a: 2, c: 4, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): c c g g a c g a t g c Downstream nucleotide summary: a: 2, c: 4, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 1, ca: 0, cc: 2, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr3:121668138-121668402 (+) ttctgtaattttatcttcaaggtgtggtctctcgtaggcaccatgtaggttttcttttttaaaaattcaggctatcggccaggtgcagtggctcacacctgtaaacccagcactttgggaggctgaggcaaatggatcacctgaggtcaggaggagttcgagactagcctgaccaacatggtgaaatcctgtctctactaaaaatacaaaaaattagctgggcatgatggcagatgcctgtaatcccagctactcgggaggctga >DA151363:1-265 (+) ttctgtaattttatcttcaaggtgtggtctctcgtaggcaccatgtaggttttcttttttaaaaattcaggctatcggccaggtgcagtggctcgcgcctgtaaacccggcactttggggggctgaggcaaatggatcacctgaggtcaggaggagttcgagactagcctgaccaacatggtgaaatcctgtctctactagaaatgcaaaaaattggctgggcatgatggcagatgcctgtggtcccggctgctcgggaggctga End editing Edited EST: DW431232, type: ag Aligns to: chr3:136494007-136494150 (++) All mismatches: ag (14), ag (15), ag (89), ag (96), ag (99), ag (113), Editing mismatches: 6, all mismatches: 6, alignment length: 144, cluster length: 100, total number of As: 21 Locations in RNA: 14 15 89 96 99 113 Locations in genome: 136494007 136494008 136494082 136494089 136494092 136494106 Upstream nucleotide (in genome): n a t a c c Upstream nucleotide summary: a: 2, c: 2, g: 0, t: 1, other: 1 Downstream nucleotide (in genome): a g g g g g Downstream nucleotide summary: a: 1, c: 0, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 1 >chr3:136494007-136494150 (+) aagatagagtcttgctctgttgcccaggatgaagtgcagtggtgcaatctctgctcactgcaacctccacctcctaggttcaagcagttctcctgcctcagcctcctgagtagctgggactacaggcacacaccaccacgccca >DW431232:14-157 (+) gggatagagtcttgctctgttgcccaggatgaagtgcagtggtgcaatctctgctcactgcaacctccacctcctgggttcaggcggttctcctgcctcggcctcctgagtagctgggactacaggcacacaccaccacgccca End editing Edited EST: BY799766, type: ag Aligns to: chr3:42625590-42625870 (++) All mismatches: ag (177), ag (189), ag (222), ag (232), ag (238), ag (257), ag (258), ag (275), Editing mismatches: 8, all mismatches: 8, alignment length: 281, cluster length: 99, total number of As: 17 Locations in RNA: 177 189 222 232 238 257 258 275 Locations in genome: 42625766 42625778 42625811 42625821 42625827 42625846 42625847 42625864 Upstream nucleotide (in genome): g c a c a c a c Upstream nucleotide summary: a: 3, c: 4, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): g c t c c a g g Downstream nucleotide summary: a: 1, c: 3, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 1, ca: 1, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr3:42625590-42625870 (+) ccctaataaatcccctcccatatatctatagatatagatctatattgtagatatatagatatcacattggttctctctctctggagaaccttgactaatacagatgtcaacacagcaggtgcatatacaggttgcaggtcaatgtagaggtctgggctgaacacagactttttttgaggctgagtctcactctgtggcctaggttggagtttagtggcacaatctcggcccactgcaacctgcgcctcccaggctcaagtgattcttctgcctcagcctcc >BY799766:1-281 (+) ccctaataaatcccctcccatatatctatagatatagatctatattgtagatatatagatatcacattggttctctctctctggagaaccttgactaatacagatgtcaacacagcaggtgcatatacaggttgcaggtcaatgtagaggtctgggctgaacacagactttttttggggctgagtctcgctctgtggcctaggttggagtttagtggcacagtctcggcccgctgcagcctgcgcctcccaggctcgggtgattcttctgcctcggcctcc End editing Edited EST: DA302666, type: ag Aligns to: chr4:578260-578823 (++) All mismatches: ag (422), ag (445), ag (471), ag (499), ag (514), ag (536), ag (537), ag (538), ag (539), ag (546), ag (547), Editing mismatches: 11, all mismatches: 11, alignment length: 566, cluster length: 126, total number of As: 37 Locations in RNA: 422 445 471 499 514 536 537 538 539 546 547 Locations in genome: 578679 578702 578728 578756 578771 578793 578794 578795 578796 578803 578804 Upstream nucleotide (in genome): c a c c a t a a a a a Upstream nucleotide summary: a: 7, c: 3, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): g t g g c a a a a a a Downstream nucleotide summary: a: 6, c: 1, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 5, ac: 1, ag: 0, at: 1, ca: 0, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr4:578260-578823 (+) gtttttgtctttgttcagtgtcagagtaatgccaacttcataaagtgagctgggaagtactccctcattttctgttttctgtgaaagaattgtatagaattgatgttatttcttccttaagtgttgagtagaattcac-ttgcaaagccatc-tgaggttgacatcttctttgggaatgactttagctataaattcaatttatttaacagatatagggctattaaggttatttaatttttttcttgaatgagctttagtgtcctgtgtttttcaaggaatttttccattttatttaagtttttagatttgttggcataaagttatcccaatatttccttagaagttgtgacttttactgcatataaaacatacctcaataaagctaatacatacatatatatatatgaatcatttctggccaggtacagtggctcatgcctgtaatcccagcactttgggaggcagaggcaggtggatcacctgagatcaggtgttccagaccagcctggccaacatgggaaacctgtctctactaaaaatacaaaaattagccaggtgtggtggc >DA302666:1-566 (+) gtttttgtctttgttcagtgtcagagtaatgccaacttcataaagtgagctgggaagtactccctcattttctgttttctgtgaaagaattgtatagaattgatgttatttcttccttaagtgttgagtagaattcactttgcaaagccatcttgaggttgacatcttctttgggaatgactttagctataaattcaatttatttaacagatatagggctattaaggttatttaatttttttcttgaatgagctttagtgtcctgtgtttttcaaggaatttttccattttatttaagtttttagatttgttggcataaagttatcccaatatttccttagaagttgtgacttttactgcatataaaacatacctcaataaagctaatacatacatatatatatatgaatcatttctggccgggtacagtggctcatgcctgtagtcccagcactttgggaggcagaggcgggtggatcacctgagatcaggtgttccggaccagcctggccagcatgggaaacctgtctctactggggatacaaggattagccaggtgtggtggc End editing Edited EST: DW424847, type: ag Aligns to: chr4:184248687-184248956 (++) All mismatches: ag (25), ag (44), ag (66), ag (68), ag (72), ag (73), ag (76), ag (78), ag (81), Editing mismatches: 9, all mismatches: 9, alignment length: 271, cluster length: 56, total number of As: 28 Locations in RNA: 25 44 66 68 72 73 76 78 81 Locations in genome: 184248695 184248714 184248735 184248737 184248741 184248742 184248745 184248747 184248750 Upstream nucleotide (in genome): t c a a a a a a a Upstream nucleotide summary: a: 7, c: 1, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): c g a a a a a a a Downstream nucleotide summary: a: 7, c: 1, g: 1, t: 0, other: 0 Dinucleotide summary: aa: 7, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr4:184248687-184248956 (+) gcaccactacactccagcctgggcaacagagtgagactgtgtctc-aaaaaaaaaaaaaaaaaaaagaaaagaaaagaaaagaaaaaagatgcagtggaagtgcagtattataatcttaatgcactgccatatacacagtctgtcgttgactgaaacgtcaatatattacatgaggctatctagatacaatagctatagataacctcaagaacatagataatagtaaaataatgaggaagggatatgtttggagtgttcatttgcttgtca >DW424847:17-287 (+) gcaccactgcactccagcctgggcaacggagtgagactgtgtctcaaaagagaaaggaagagaagagaaaagaaaagaaaagaaaaaagatgcagtggaagtgcagtattataatcttaatgcactgccatatacacagtctgtcgttgactgaaacgtcaatatattacatgaggctatctagatacaatagctatagataacctcaagaacatagataatagtaaaataatgaggaagggatatgtttggagtgttcatttgcttgtca End editing Edited EST: CD520504, type: ga Aligns to: chr4:159796007-159796274 (++) All mismatches: ga (249), ga (255), ga (259), ga (261), ga (270), Editing mismatches: 5, all mismatches: 5, alignment length: 268, cluster length: 21, total number of Gs: 6 Locations in RNA: 249 255 259 261 270 Locations in genome: 159796254 159796259 159796263 159796265 159796274 Upstream nucleotide (in genome): a a a a a Upstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a n Downstream nucleotide summary: a: 4, c: 0, g: 0, t: 0, other: 1 Dinucleotide summary: aa: 4, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr4:159796007-159796274 (+) gattgcctgagctcaggagtttgcgaccagcctggggaacacagtgaaaccccgtctctactaaaatacaaaaaaaaaaaaaagttgccaggtgtggcagcgggtgcctgtagtcccagctacttgggaggctgaggcaggagaattgcttgaactcgggaggcagagaggttgcagtgcgctgagatcatgccactgcactccagcctgagcaatagagcgagactgtctcaaaaaaaaaaaaaaaga-aaagaaagagaaaagaaag >CD520504:3-270 (+) gattgcctgagctcaggagtttgcgaccagcctggggaacacagtgaaaccccgtctctactaaaatac-aaaaaaaaaaaaagttgccaggtgtggcagcgggtgcctgtagtcccagctacttgggaggctgaggcaggagaattgcttgaactcgggaggcagagaggttgcagtgcgctgagatcatgccactgcactccagcctgagcaatagagcgagactgtctcaaaaaaaaaaaaaaaaacaaaaaaaaaaaaaagaaaa End editing Edited EST: BP387118, type: ag Aligns to: chr5:81590389-81590503 (++) All mismatches: ag (280), ag (297), ag (301), ag (302), ag (310), ag (320), ag (336), Editing mismatches: 7, all mismatches: 7, alignment length: 115, cluster length: 57, total number of As: 17 Locations in RNA: 280 297 301 302 310 320 336 Locations in genome: 81590389 81590406 81590410 81590411 81590419 81590429 81590445 Upstream nucleotide (in genome): n g c a c c c Upstream nucleotide summary: a: 1, c: 4, g: 1, t: 0, other: 1 Downstream nucleotide (in genome): g g a g c g g Downstream nucleotide summary: a: 1, c: 1, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr5:81590389-81590503 (+) agctactcgggaggttgaggcaagagaatcacttgaactcaggaggttgagattgcagtgagccgagatcgcgccactgcactccagcctgacagagcgagactggcttaaaaaa >BP387118:280-394 (+) ggctactcgggaggttggggcgggagaatcgcttgaactcgggaggttgagattgcggtgagccgagatcgcgccactgcactccagcctgacagagcgagactggcttaaaaaa End editing Edited EST: DA099107, type: ag Aligns to: chr6:36920913-36921183 (++) All mismatches: ag (241), ag (243), ag (246), ag (248), ag (306), ag (327), ag (336), ag (346), ag (362), ag (370), ag (376), ga (436), Editing mismatches: 11, all mismatches: 12, alignment length: 273, cluster length: 136, total number of As: 40 Locations in RNA: 241 243 246 248 306 327 336 346 362 370 376 Locations in genome: 36920932 36920934 36920937 36920939 36920997 36921018 36921027 36921037 36921053 36921061 36921067 Upstream nucleotide (in genome): a a t c c c c c c c c Upstream nucleotide summary: a: 2, c: 8, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): a a c a g g c g g a t Downstream nucleotide summary: a: 4, c: 2, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 0, ca: 2, cc: 1, cg: 4, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr6:36920913-36921183 (+) tgaaaccccatctctactaaaaatacaaaaatttgccgggcatggtagcagctatggtgggcagcatggtgggcaagtagtcccagctacttgggaggctgaggcaggagaatcacttgaacccaggaggcagaggttgcagtgagccaagatcatgccactgcactccagcctgggtgacagagcgagactccatctcaaaaaaaaaaaaaaag--tttattggtaagaattttattctttttattctttttcattgcttttataaatgaaa >DA099107:222-494 (+) tgaaaccccatctctactagagatgcgaaaatttgccgggcatggtagcagctatggtgggcagcatggtgggcaagtagtcccggctacttgggaggctgaggcgggagaatcgcttgaacccgggaggcagaggttgcggtgagccgagatcgtgccactgcactccagcctgggtgacagagcgagactccatctcaaaaaaaaaaaaaaaaagtttattggtaagaattttattctttttattctttttcattgcttttataaatgaaa End editing Edited EST: AW276939, type: ga Aligns to: chr6:35437155-35437306 (++) All mismatches: ga (189), ga (215), ga (236), ga (238), ga (244), ga (248), ga (274), ga (277), Editing mismatches: 8, all mismatches: 8, alignment length: 152, cluster length: 89, total number of Gs: 29 Locations in RNA: 189 215 236 238 244 248 274 277 Locations in genome: 35437175 35437201 35437222 35437224 35437230 35437234 35437260 35437263 Upstream nucleotide (in genome): c g c a a c a c Upstream nucleotide summary: a: 3, c: 4, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): c g a g g t g c Downstream nucleotide summary: a: 1, c: 2, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 3, at: 0, ca: 1, cc: 2, cg: 0, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr6:35437155-35437306 (+) caggcttaagtccactccccgccctaagttctctgtgtgtgtcctgggggaccagcagcactgtgacgaggctaaggccgtggatatcccccacatggacatcgaggcgctgaaaaaactcaacaagaataaaaaactggtcaagaagctgg >AW276939:169-320 (+) caggcttaantccactccccaccctaagttctctgtgtgtgtcctgagggaccancancactgtgacaaagctaaagccatggatatcccccacatggacatcnaagcactgaaaaaactcaacaagaataaaaaactggtcaagaagctgg End editing Edited EST: AW802261, type: ag Aligns to: chr6:17461902-17462153 (++) All mismatches: ag (61), ag (90), ag (144), ag (145), ag (159), ag (176), ag (202), ag (208), ag (212), Editing mismatches: 9, all mismatches: 9, alignment length: 252, cluster length: 152, total number of As: 41 Locations in RNA: 61 90 144 145 159 176 202 208 212 Locations in genome: 17461962 17461991 17462045 17462046 17462060 17462077 17462103 17462109 17462113 Upstream nucleotide (in genome): c a a a t t t c t Upstream nucleotide summary: a: 3, c: 2, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): c g a c a g g g c Downstream nucleotide summary: a: 2, c: 3, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 0, ca: 0, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr6:17461902-17462153 (+) ggtacacttctgtaatttttttaatttaaaaaattaacaaggccaggcgtggtggctcacacctgtgatcccagcactttgggaggccaaggtgggcggatcatgaggtcaggagatcgagaccatcctggcgaacactgtgaaaccccgtctctactaaaaatacaaaaaaattagccaggcgtggtggcgggcgcctgtagtcccagctactcggggggctgaggcaggagaatggcatgaacctggggg >AW802261:1-252 (+) ggtacacttctgtaatttttttaatttaaaaaattaacaaggccaggcgtggtggctcacgcctgtgatcccagcactttgggaggccagggtgggcggatcatgaggtcaggagatcgagaccatcctggcgaacactgtgaggccccgtctctactgaaaatacaaaaaaattggccaggcgtggtggcgggcgcctgtggtcccggctgctcggggggctgaggcaggagaatggcatgaacctggggg End editing Edited EST: BF592683, type: ag Aligns to: chr6:42755986-42756357 (++) All mismatches: tc (22), ag (60), ag (95), ag (96), ag (121), ag (129), ag (135), ag (145), ag (153), ag (178), ag (198), ag (202), Editing mismatches: 11, all mismatches: 12, alignment length: 372, cluster length: 143, total number of As: 36 Locations in RNA: 60 95 96 121 129 135 145 153 178 198 202 Locations in genome: 42756027 42756062 42756063 42756088 42756096 42756102 42756112 42756120 42756145 42756165 42756169 Upstream nucleotide (in genome): a c a c t t c c t t c Upstream nucleotide summary: a: 2, c: 5, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t a g a g c c c g g g Downstream nucleotide summary: a: 2, c: 3, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 2, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr6:42755986-42756357 (+) cagttttgctcttgttgcccaggctggagtgcagtggcgcaatctcagctcactgcaacctccacctcttgggttcaagcaattctcctgcctcagcctcccaagtagctagaattacaggtatgcaccaccacacccagctaattttgtatttttagtagagacgggtccaccatgttagccaggctggtctcgaactcctgacctcaggtgatccacgcacctaggcctcccaaaatgttgggattataggtgtgagccaccatgcctggccgggagcagcattcttaaggaattcaagacacaggaagaacacttgcctttagtgggagcaagacaacgcagtgtggcagaagacaaagaatgggggca >BF592683:19-390 (+) cagctttgctcttgttgcccaggctggagtgcagtggcgcagtctcagctcactgcaacctccacctcttgggttcgggcaattctcctgcctcagcctcccgagtagctggaattgcaggtatgcgccaccacgcccagctaattttgtatttttagtggagacgggtccaccatgttggccgggctggtctcgaactcctgacctcaggtgatccacgcacctaggcctcccaaaatgttgggattataggtgtgagccaccatgcctggccgggagcagcattcttaaggaattcaagacacaggaagaacacttgcctttagtgggagcaagacaacgcagtgtggcagaagacaaagaatgggggca End editing Edited EST: DA514116, type: ag Aligns to: chr7:94203628-94204176 (++) All mismatches: ct (198), ag (400), ag (401), ag (478), ag (493), ag (498), ag (502), ag (505), ag (508), ag (521), ag (534), ag (544), Editing mismatches: 11, all mismatches: 12, alignment length: 549, cluster length: 145, total number of As: 46 Locations in RNA: 400 401 478 493 498 502 505 508 521 534 544 Locations in genome: 94204027 94204028 94204105 94204120 94204125 94204129 94204132 94204135 94204148 94204161 94204171 Upstream nucleotide (in genome): t a a a t a a t c t t Upstream nucleotide summary: a: 5, c: 1, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): a t c a c a t g g g c Downstream nucleotide summary: a: 3, c: 3, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 2, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 2, tt: 0, other: 0 >chr7:94203628-94204176 (+) tttgtacatctggtagaatttggctgtgaatccatcaggtccagggctttttttggttggtaggctacttattactgattcagttttggagcttgttattagtctgttcagggaatcaatttctttctgattcagtcttgggaggatatatgtgtccaagaatttatccatctcttctacattttctagtttgtgtgcatagaggtattcgtagtagtttctgatggttagttttatttctttgtggtcagtggtaacattcccatcatcatttctgattgttttatttggatcttctctcttttctcctttattagtccagctagcagccatctatcttaatgatttttttcaaaaaaaaaaaaaattcctgagccgggtgtggtggctcatgcgtgtaatcccaggactttggaagcctgagacggacggatcatgagatcaggagatcaagaccatcctggctaacacggtgaaaccccgcctctactaaaaatacaaaaaattagccgggcatggcagcgggcacctgtagtcccagctacttgg >DA514116:1-549 (+) tttgtacatctggtagaatttggctgtgaatccatcaggtccagggctttttttggttggtaggctacttattactgattcagttttggagcttgttattagtctgttcagggaatcaatttctttctgattcagtcttgggaggatatatgtgtccaagaatttatccatctcttctacattttctagtttgtgtgtatagaggtattcgtagtagtttctgatggttagttttatttctttgtggtcagtggtaacattcccatcatcatttctgattgttttatttggatcttctctcttttctcctttattagtccagctagcagccatctatcttaatgatttttttcaaaaaaaaaaaaaattcctgagccgggtgtggtggctcatgcgtgtggtcccaggactttggaagcctgagacggacggatcatgagatcaggagatcaagaccatcctggctaacacggtgaagccccgcctctactagaaatgcaagaagttggccgggcatggcggcgggcacctgtggtcccagctgcttgg End editing Edited EST: DB138369, type: ag Aligns to: chr7:129326941-129327352 (++) All mismatches: ag (230), ag (233), ag (247), ag (278), ag (281), ag (290), ag (303), ag (307), ag (317), ag (327), ag (344), Editing mismatches: 11, all mismatches: 11, alignment length: 414, cluster length: 115, total number of As: 29 Locations in RNA: 230 233 247 278 281 290 303 307 317 327 344 Locations in genome: 129327168 129327171 129327185 129327216 129327219 129327228 129327241 129327245 129327255 129327265 129327282 Upstream nucleotide (in genome): t a c a c t c t t c a Upstream nucleotide summary: a: 3, c: 4, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): c t g g a c a g c c t Downstream nucleotide summary: a: 2, c: 4, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 2, ca: 2, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 3, tg: 1, tt: 0, other: 0 >chr7:129326941-129327352 (+) ttcagagtccaacccttttgaattacttcttgtttcagtcatcattgtctgtgttttttcatgtaatattgtcctctgtgccatcatgaaaacaggcaatgctatatttctttaaaaagtgctctgttattgtctgaatttttgcccccaagcagcaacaggtttgatgcaagtcctttttttttttttttt--gaggcggagtctcaccctgttgcccaggctggagtacaatggtgcaaatctcagctcactgcaacctccacctcccgggttcaagcaattctcctacctcagcctcccaagtagctgggattacaggcgcccaccaccacgcccagctaatttttgtatttttagtatagacagggtttcaccatgttggtcaggctggtctcgaacttctgacctcagg >DB138369:1-414 (+) ttcagagtccaacccttttgaattacttcttgtttcagtcatcattgtctgtgttttttcatgtaatattgtcctctgtgccatcatgaaaacaggcaatgctatatttctttaaaaagtgctctgttattgtctgaatttttgcccccaagcagcaacaggtttgatgcaagtccttttttttttttttttttgaggcggagtctcaccctgttgcccaggctggagtgcagtggtgcaaatctcggctcactgcaacctccacctcccgggttcaggcgattctcctgcctcagcctcccgagtggctgggattgcaggcgcccgccaccacgcccagctagtttttgnatttttagtatagacagggtttcaccatgttggtcaggctggtctcgaacttctgacctcagg End editing Edited EST: DW432303, type: ag Aligns to: chr7:65399626-65399875 (++) All mismatches: ag (161), ag (191), ag (199), ag (200), ag (208), ag (216), ag (221), ag (235), ag (244), ag (245), ag (249), Editing mismatches: 11, all mismatches: 11, alignment length: 250, cluster length: 89, total number of As: 21 Locations in RNA: 161 191 199 200 208 216 221 235 244 245 249 Locations in genome: 65399770 65399800 65399808 65399809 65399817 65399825 65399830 65399844 65399853 65399854 65399858 Upstream nucleotide (in genome): c t c a c g c c c a t Upstream nucleotide summary: a: 2, c: 6, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g g a g g g g g a c g Downstream nucleotide summary: a: 2, c: 1, g: 8, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 2, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr7:65399626-65399875 (+) ctgtgccaggcttatttcatccagcataatgttctccaattccatccacgtcaccaatgacagaatttctctcgttttaaaggctgaagaatcttacaaatgttaaagcactttagatattaaaaaaaagtctaggctgggctcagtggctcatgcctgtggtctcagcattttaggaggccaaggcgggcagatcacgaggtcaggagttcgagaccagccttgccaacatagtgaaaccccgtctcta >DW432303:17-266 (+) ctgtgccaggcttatttcatccagcataatgttctccaattccatccacgtcaccaatgacagaatttctctcgttttaaaggctgaagaatcttacaaatgttaaagcactttagatattaaaaaaaagtctaggctgggctcggtggctcatgcctgtggtctcagcattttgggaggccggggcgggcggatcacggggtcgggagttcgagaccggccttgccggcatggtgaaaccccgtctcta End editing Edited EST: AA357556, type: ag Aligns to: chr7:13491814-13492096 (++) All mismatches: ag (23), ag (30), ag (31), ag (55), ag (66), ag (102), Editing mismatches: 6, all mismatches: 6, alignment length: 283, cluster length: 80, total number of As: 22 Locations in RNA: 23 30 31 55 66 102 Locations in genome: 13491835 13491842 13491843 13491867 13491878 13491914 Upstream nucleotide (in genome): a t a t t t Upstream nucleotide summary: a: 2, c: 0, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t a g t a g Downstream nucleotide summary: a: 2, c: 0, g: 2, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 1, tt: 1, other: 0 >chr7:13491814-13492096 (+) tgccttctgccatgactgtaaattttctaaggcctattcagccacgcagaactatgagtcagttaaacctcttttgtttataaattacccagcctctggtagtagctttatagtactgtgaaaacagacaaataaaacatttttaaatggcctcatgtattatgagtccttatatacatggaggcaagacatgtacataggaaaggatgatgggaaattttttcaaatttagtatgaggtataagtcagccaagtgaccttgaattaagagagggtaagaact >AA357556:2-284 (+) tgccttctgccatgactgtaagttttctggggcctattcagccacgcagaactgtgagtcagttgaacctcttttgnttataaattacccagcctctggtggtagctttatagtactgtgaaaacagacaaataaaacatttttaaatggcctcatgtattangagtccttatatacatggaggcaagacatgtacataggaaaggntgatgggaaattttttcaaatttagtatgaggtataagtcagccaagtgaccttgaattaagagagggtaagaact End editing Edited EST: BX486714, type: ag Aligns to: chr8:121285937-121286300 (++) All mismatches: ag (96), ag (97), ag (112), ag (113), ag (114), ag (115), ag (116), Editing mismatches: 7, all mismatches: 7, alignment length: 364, cluster length: 21, total number of As: 13 Locations in RNA: 96 97 112 113 114 115 116 Locations in genome: 121286032 121286033 121286048 121286049 121286050 121286051 121286052 Upstream nucleotide (in genome): t a a a a a a Upstream nucleotide summary: a: 6, c: 0, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): a a a a a a a Downstream nucleotide summary: a: 7, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 6, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr8:121285937-121286300 (+) ggataaattcctggaaacaacaacccccctagattaaatcaagaataagccctgagcagaccaacaacaggcagtgagattgcatcagtgattttaaaacagttttccaaaaaaaaaaaaaggcccagggccagatggattcacagatgaatactaccagacattcaaagaagaattggtaccaattgtatggaaactattaggttggtgcaaaccacaactacttttgcaccaacctaatattctaaaagattagaaggggaattctcactaaatctttttgtgaagccagtattacctgatacaaaaaccagtagaggacataatgaaaaagaaaattacatgccaacatcccttgtgaaca >BX486714:1-364 (+) ggataaattcctggaaacaacaacccccctagattaaatcaagaataagccctgagcagaccaacaacaggcagtgagattgcatcagtgattttggaacagttttccaaagggggaaaaaggcccagggccagatggattcacagatgaatactaccagacattcaaagaagaattggtaccaattgtatggaaactattaggttggtgcaaaccacaactacttttgcaccaacctaatattctaaaagattagaaggggaattctcactaaatctttttgtgaagccagtattacctgatacaaaaaccagtagaggacataatgaaaaagaaaattacatgccaacatcccttgtgaaca End editing Edited EST: AW317046, type: ga Aligns to: chr8:117657072-117657345 (++) All mismatches: ga (113), ga (136), ga (191), ga (194), ga (201), ga (207), ga (210), ga (234), ga (243), ga (259), ga (274), Editing mismatches: 11, all mismatches: 11, alignment length: 274, cluster length: 162, total number of Gs: 41 Locations in RNA: 113 136 191 194 201 207 210 234 243 259 274 Locations in genome: 117657184 117657207 117657262 117657265 117657272 117657278 117657281 117657305 117657314 117657330 117657345 Upstream nucleotide (in genome): a a t a g t a t t a t Upstream nucleotide summary: a: 5, c: 0, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): a a a a g a a a a t n Downstream nucleotide summary: a: 8, c: 0, g: 1, t: 1, other: 1 Dinucleotide summary: aa: 4, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 4, tc: 0, tg: 0, tt: 0, other: 1 >chr8:117657072-117657345 (+) caagattttgttttattttattatggctagaaagacactgttatagccaaaatcggcaatgacactaaagaaatcctctgtgcttttcaatatgcaaatatatttcttccaagagttgccctggtgtgacttcaagagttcatgttaacttcttttctggaaacttccttttcttagttgttgtattcttgaagagcctgggccatgaagagcttgcctaagttttgggcagtgaactccttgatgttctggcagtaagtgtttatctggcctg >AW317046:1-274 (+) caagattttgttttattttattatggctagaaagacactgttatagccaaaatcggcaatgacactaaagaaatcctctgtgcttttcaatatgcaaatatatttcttccaaaagttgccctggtgtgacttcaaaagttcatgttaacttcttttctggaaacttccttttcttagttgttgtattcttaaaaagcctgagccataaaaagcttgcctaagttttgggcantaaactccttaatgttctggcagtaaatgtttatctggccta End editing Edited EST: AW962234, type: ga Aligns to: chr8:48232325-48232820 (++) All mismatches: ga (488), ga (490), ga (495), ga (497), ga (499), ga (502), Editing mismatches: 6, all mismatches: 6, alignment length: 496, cluster length: 15, total number of Gs: 6 Locations in RNA: 488 490 495 497 499 502 Locations in genome: 48232804 48232806 48232811 48232813 48232815 48232818 Upstream nucleotide (in genome): a a a a a a Upstream nucleotide summary: a: 6, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a a Downstream nucleotide summary: a: 6, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 6, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr8:48232325-48232820 (+) aacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaactcactcaaaactgctcaactacatggaaactgaacaacctgctcctgaatgactactgggtacataacgaaatgaaagcagaaataaagatgttcttggaaaccaacgagagcaaagacacaacataaccagaatctctgggacacattcaaagcagtgtgtagagggaaatttatagcactaaatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaagaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaagatcagagcagaactgaaggaaatagagacataaaaaacccttcaaaaaatcagtgaatccaggagctggtcttttgaaaagatcaacaaacttgataggctgctagaaagattactaaaagagaaaagagagaagaa >AW962234:9-504 (+) aacaaactgtctctcagaccacagtgcaatcaaactagaactcaggattaagaaactcactcaaaactgctcaactacatggaaactgaacaacctgctcctgaatgactactgggtacataacgaaatgaaagcagaaataaagatgttcttggaaaccaacgagagcaaagacacaacataaccagaatctctgggacacattcaaagcagtgtgtagagggaaatttatagcactaaatgcccacaagagaaagcaggaaagatctaaaattgacaccctaacatcacaattaaaagaactagagaagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaagatcagagcagaactgaaggaaatagagacataaaaaacccttcaaaaaatcagtgaatccaggagctggtcttttgaaaagatcaacaaacttgataggctgctagaaagattactaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: AA493100, type: ag Aligns to: chr8:42201510-42201797 (++) All mismatches: ag (156), ag (157), ag (159), ag (163), ag (165), ag (172), ag (225), ag (249), Editing mismatches: 8, all mismatches: 8, alignment length: 285, cluster length: 94, total number of As: 29 Locations in RNA: 156 157 159 163 165 172 225 249 Locations in genome: 42201661 42201662 42201664 42201668 42201670 42201677 42201730 42201754 Upstream nucleotide (in genome): a a a a a a a g Upstream nucleotide summary: a: 7, c: 0, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a g t g Downstream nucleotide summary: a: 5, c: 0, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 5, ac: 0, ag: 1, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr8:42201510-42201797 (+) gtggtggcgcatgcctgtaatcccagctactcaggaggctgaggtaggaggattgcttaaacctgggaagcggaggtgacagtgagctgagatcacgccactgcactccagactgggcgacagactgggcgagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaaagtggccgggagtggtggttcacgcctgtaatcctagctggttcacacctgtaatcctagctttctttgggaggctgaggcgggtggatcacctgaggtcagagtttgagaccagcctggc >AA493100:8-292 (+) gtggtggcgcatg-ctgtaatcccagctactcaggaggctgaggtaggaggattgcttaaacctgggaagcggaggtgacagtgagctgagatcacgccactgcactccagactgggcgacagactgggcgagactccgtctc--aaaaaaggagaaagagaaaaaaggtggccgggagtggtggttcacgcctgtaatcctagctggttcacacctgtagtcctagctttctttgggaggctggggcgggtggatcacctgaggtcagagtttgagaccagcctggc End editing Edited EST: DA252255, type: ag Aligns to: chr9:131092684-131093155 (++) All mismatches: ag (113), ag (121), ag (146), ag (159), ag (190), ag (193), ag (215), ag (219), ag (229), ag (268), Editing mismatches: 10, all mismatches: 10, alignment length: 471, cluster length: 156, total number of As: 32 Locations in RNA: 113 121 146 159 190 193 215 219 229 268 Locations in genome: 131092796 131092804 131092829 131092842 131092873 131092876 131092898 131092902 131092912 131092951 Upstream nucleotide (in genome): t c a c a c c t t t Upstream nucleotide summary: a: 2, c: 4, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g c t g g a a g c t Downstream nucleotide summary: a: 2, c: 2, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 2, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 1, other: 0 >chr9:131092684-131093155 (+) gtgagcacgtaggtaatttttaattttctgccagctactttaatagcaaaaagaaattaatttttttgctattaaaattaaggtggaatttttttgtttgtttttttgagatagagtctcactctgttgcccaggctggagtgcaatggtgccatctcagctcactgcaacctctgccttctgggatcaagcaattctcttgtctcagcctcccaagtagctgggattacaggcacccgccaccatgcctggctaatttttgaccatattggtcaggctggccttgagctcctcaggtgatccgcccgcctcggcctcccaaagtgctgggattgtaaccatgagtcaccgtgcctggctagaattgattttaaatatgcatcttgtttagcccaatatatccaaagtattatttcaacaagtaatcaattttctttttttttttttttttgagacgaagtctcactctgta >DA252255:1-471 (+) gtgagcacgtaggtaatttttaattttctgccagctactttaatagcaaaaagaaattaatttttttgctattaaaattaaggtggaatttttttgtttgtttttttgagatggagtctcgctctgttgcccaggctggagtgcagtggtgccatctcggctcactgcaacctctgccttctgggatcaggcgattctcttgtctcagcctcccgagtggctgggattgcaggcacccgccaccatgcctggctaatttttgaccatgttggtcaggctggccttgagctcctcaggtgatccgcccgcctcggcctcccaaagtgctgggattgtaaccatgagtcaccgtgcctggctagaattgattttaaatatgcatcttgtttagcccaatatatccaaagtattatttcaacaagtaatcaattttctttttttttttttttt-gagacgaagtctcactctgta End editing Edited EST: DB140187, type: ag Aligns to: chr9:86239705-86240241 (++) All mismatches: ag (26), ag (30), ag (31), ag (68), ag (111), ag (128), ag (138), ag (192), ag (197), ag (204), Editing mismatches: 10, all mismatches: 10, alignment length: 539, cluster length: 177, total number of As: 40 Locations in RNA: 26 30 31 68 111 128 138 192 197 204 Locations in genome: 86239728 86239732 86239733 86239770 86239813 86239830 86239839 86239892 86239897 86239904 Upstream nucleotide (in genome): c c a t t c g a c t Upstream nucleotide summary: a: 2, c: 4, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): a a t g g t g g g c Downstream nucleotide summary: a: 2, c: 1, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 2, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr9:86239705-86240241 (+) tgcaacctcctcctcccgggttcaagcaattctcctgcctcaggctcctaagtagctgggattataggcgcccaccaccatgcacagctaattttttgtatttttagtagagacggggtttcatcatgttggc-gagg-ctggtctcaaactcctgacctcaggtgatccatgcgtctcagcctcccaaagtgcagggattacaggcgtgagccaccgcgcccagctaaggcttggcttctttaaggagcaggaaggaacccattgtggctgagtgaggggaagcatgatgggagatgaagtcagaaacaatgcaggtaaagagaatgtggtcatatgctggcaatattttgaaggtagagtcagaaagatgtgtttgtggactggatgttgggtgtaagaagacaagagagaagtcaaggatgattcaagattttaggcctgagtaattggaaggagggagtcgccacaaactgatttggggaagcagtagatagagcagatttggaagacaacctcagaagctcagtgtgggatatg >DB140187:3-541 (+) tgcaacctcctcctcccgggttcgagcggttctcctgcctcaggctcctaagtagctgggattatgggcgcccaccaccatgcacagctaattttttgtatttttagtggagacggggtttcatcgtgttggcaggggcctggtctcaaactcctgacctcaggtgatccatgcgtctcagcctcccaaggtgcggggattgcaggcgtgagccaccgcgcccagctaaggcttggcttctttaaggagcaggaaggaacccattgtggctgagtgaggggaagcatgatgggagatgaagtcagaaacaatgcaggtaaagagaatgtggtcatatgctggcaatattttgaaggtagagtcagaaagatgtgtttgtggactggatgttgggtgtaagaagacaagagagaagtcaaggatgattcaagattttaggcctgagtaattggaaggagggagtcgccacaaactgatttggggaagcagtagatagagcagatttggaagacaacctcagaagctcagtgtgggatatg End editing Edited EST: BM956140, type: ga Aligns to: chr9:123852907-123853396 (++) All mismatches: ga (343), ga (392), ga (428), ga (432), ga (463), ga (464), Editing mismatches: 6, all mismatches: 6, alignment length: 489, cluster length: 123, total number of Gs: 26 Locations in RNA: 343 392 428 432 463 464 Locations in genome: 123853249 123853298 123853334 123853338 123853370 123853371 Upstream nucleotide (in genome): a a g g t g Upstream nucleotide summary: a: 2, c: 0, g: 3, t: 1, other: 0 Downstream nucleotide (in genome): g a a a g g Downstream nucleotide summary: a: 3, c: 0, g: 3, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 2, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr9:123852907-123853396 (+) agcttacaggccagatcaggccagctatctatttttgtaagtaaagttttattggaacacagtcacccttatttgtttacatattgtctgtggttgtttttgcactacagtagcagagcttagtagttgccacagactatatggcccgcaaagccaaaaacatttactatttggcctttgtattcgttcattttcatgctgctgataaagacatacccaagactgggcaatttacaaaagaaagaggtttaattggacttacagtttcacgtggctggggaagcctcacaatcgtggtggaaggcaaagaggagcaagtcacgtcttacatggatggcagcaggcctaaagagagcttgtgaaggaaaactcccccttataataaccaccagatcttgtgagacttactatcacgagaacagtaggggaaggacctgcccccatgattcaattatctccca-ctgggtccctcccacaacacatgggaatt >BM956140:1-489 (+) agcttacaggccagatcaggccagctatctatttttgtaagtaaagttttattggaacacagtcacccttatttgtttacatattgtctgtggttgtttttgcactacagtagcagagcttagtagttgccacagactatatggcccgcaaagccaaaaacatttactatttggcctttgtattcgttcattttcatgctgctgataaagacatacccaagactgggcaatttacaaaagaaagaggtttaattggacttacagtttcacgtggctggggaagcctcacaatcgtggtggaaggcaaagaggagcaagtcacgtcttacatggatggcagcaagcctaaagagagcttgtgaangaaaactcccccttataataaccancaaatcttgtgagacttactatcacgagaacantagggaanga-cctgcccccatgattcaattatctcccaac-aagtccctcccacaacacatgggaatt End editing Edited EST: AV734524, type: ga Aligns to: chr9:33313311-33313475 (++) All mismatches: ga (140), ga (143), ga (146), ga (152), ga (154), ga (155), ga (156), ga (158), ga (162), ga (163), Editing mismatches: 10, all mismatches: 10, alignment length: 163, cluster length: 25, total number of Gs: 10 Locations in RNA: 140 143 146 152 154 155 156 158 162 163 Locations in genome: 33313451 33313454 33313457 33313463 33313465 33313467 33313468 33313470 33313474 33313475 Upstream nucleotide (in genome): a a a a a t g a a g Upstream nucleotide summary: a: 7, c: 0, g: 2, t: 1, other: 0 Downstream nucleotide (in genome): a a a a t g a a g n Downstream nucleotide summary: a: 6, c: 0, g: 2, t: 1, other: 1 Dinucleotide summary: aa: 5, ac: 0, ag: 1, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 1 >chr9:33313311-33313475 (+) gcgtggtggctcaagcctgtaatcccaacactttgggagcctgaggcaggaggatcgcttaagcctaggagtttaagattagtctgggcaatatagtgagaccctgtctctatttaaaaaaaaaaacaaaaacaaaaacagaagaagaaaaagagtggagaaagg >AV734524:1-163 (+) gcgtggtggctcaagcctgtaatcccaacactttgggagcctgaggcaggaggatcgcttaagcctaggagtttaagattagtctgggcaatatagtgagaccctgtctctatttaaaaaaaaaaacaaaaacaaaaa-aaaaaaaaaaaaaaaa-aaaaaaaaa End editing Edited EST: DA379448, type: ag Aligns to: chrX:136001449-136001995 (++) All mismatches: ag (277), ag (301), ag (310), ag (345), ag (346), ag (363), ag (385), ag (391), ag (506), ag (518), Editing mismatches: 10, all mismatches: 10, alignment length: 546, cluster length: 242, total number of As: 44 Locations in RNA: 277 301 310 345 346 363 385 391 506 518 Locations in genome: 136001726 136001750 136001759 136001794 136001795 136001812 136001834 136001840 136001955 136001967 Upstream nucleotide (in genome): t c g c a c t c a t Upstream nucleotide summary: a: 2, c: 4, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): c g t a g g c c g c Downstream nucleotide summary: a: 1, c: 4, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 3, tg: 0, tt: 0, other: 0 >chrX:136001449-136001995 (+) aaagtcaaaatgcaactgatataccaagaaaaactatttgtgatttgggggtgatgaaagattgatttctttcatccagagcccatatgcaaaccaatcaggaaaaggcaaacagaccaaaagaaaaatgggcaaaggctacagtctgctttacagaaaaataaatgcaaatggacaaagaacatgaacctatactcaactgcagccataattaaagagatacaaattaagacaacactgaaaagcatttttttttttttttctgagactgagtcttactttgtcgccaaggctggagtgcagtggctcgatcttggctcactgcaacctctgctgcccgggttcaagtgattctcctgcctcagcctcccaagtagctgagattacaggcacctgccaccgtgcacggctaatttttgtatttttagtagagacggggtttcgctatcttggtcaggctggtctcgaactcctgacctcatgatccactcgcctcagcctcctaaagtgctgggattacaggcgtgagccactgcgcccagccgaa >DA379448:1-546 (+) aaagtcaaaatgcaactgatataccaagaaaaactatttgtgatttgggggtgatgaaagattgatttctttcatccagagcccatatgcaaaccaatcaggaaaaggcaaacagaccaaaagaaaaatgggcaaaggctacagtctgctttacagaaaaataaatgcaaatggacaaagaacatgaacctatactcaactgcagccataattaaagagatacaaattaagacaacactgaaaagcatttttttttttttt-ctgagactgagtcttgctttgtcgccaaggctggagtgcggtggctcggtcttggctcactgcaacctctgctgcccgggttcgggtgattctcctgcctcggcctcccaagtagctgagattgcaggcgcctgccaccgtgcacggctaatttttgtatttttagtagagacggggtttcgctatcttggtcaggctggtctcgaactcctgacctcatgatccactcgcctcagcctcctaaggtgctgggattgcaggcgtgagccactgcgcccagccgaa End editing Edited EST: DW421624, type: ag Aligns to: chrX:44755359-44755640 (++) All mismatches: ag (16), ag (25), ag (106), ag (116), ta (118), ag (122), ag (138), ag (143), ag (187), ag (241), ag (256), Editing mismatches: 10, all mismatches: 11, alignment length: 282, cluster length: 241, total number of As: 42 Locations in RNA: 16 25 106 116 122 138 143 187 241 256 Locations in genome: 44755359 44755368 44755449 44755459 44755465 44755481 44755486 44755530 44755584 44755599 Upstream nucleotide (in genome): n t t t c c a t a c Upstream nucleotide summary: a: 2, c: 3, g: 0, t: 4, other: 1 Downstream nucleotide (in genome): c g g c c g t a a g Downstream nucleotide summary: a: 2, c: 3, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 1, ca: 0, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 1 >chrX:44755359-44755640 (+) acccaggctagagtgcagtggctggatttccgctcactgcaagctccgcctcctgggttcatgccattctcctgcttcagcctcccgagtagctgggactactggcacctgccaccacgcccagctaatttttttgtattttttttagtagagacggggtttcactgtgttaaccaggatggtcacgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagtcaccgcgcccggccaaaaataaattttcttaa >DW421624:16-297 (+) gcccaggctggagtgcagtggctggatttccgctcactgcaagctccgcctcctgggttcatgccattctcctgcttcagcctcccgagtggctgggactgcaggcgcctgccaccacgcccggctagtttttttgtattttttttagtagagacggggtttcactgtgttgaccaggatggtcacgatctcctgacctcgtgatccgcccgcctcggcctcccagagtgctgggattacgggcgtgagtcaccgcgcccggccaaaaataaattttcttaa End editing Edited EST: DW425604, type: ag Aligns to: chrX:41022727-41022995 (++) All mismatches: ag (33), ag (46), ag (96), ag (124), ag (136), ag (137), ag (142), ag (149), ag (175), Editing mismatches: 9, all mismatches: 9, alignment length: 269, cluster length: 143, total number of As: 45 Locations in RNA: 33 46 96 124 136 137 142 149 175 Locations in genome: 41022743 41022756 41022806 41022834 41022846 41022847 41022852 41022859 41022885 Upstream nucleotide (in genome): c a g c a a c c t Upstream nucleotide summary: a: 3, c: 4, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): c c c t a a a g g Downstream nucleotide summary: a: 3, c: 3, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 0, ca: 1, cc: 1, cg: 1, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chrX:41022727-41022995 (+) aggcacggtggctcacacctgtaatcccaacacttggggaggccaaggcaagtggatggtttgagcccaggagttcaagaccagcctgggcagcatggcgaaatcccatctctaaaaaaaaatacaaaaatcagccaggcatggtggtgttcacctgtagtcccgggtactcgggaggctggggtgggaggatcacttcaacctcggaggcggaggttgcagtgagctgtgattgcaccactgcactccagaccctgtctcaaaaaaaa >DW425604:17-285 (+) aggcacggtggctcacgcctgtaatcccagcacttggggaggccaaggcaagtggatggtttgagcccaggagttcaaggccagcctgggcagcatggcgaaatcccgtctctaaaaaaggatacgaaaatcggccaggcatggtggtgttcacctgtggtcccgggtactcgggaggctggggtgggaggatcacttcaacctcggaggcggaggttgcagtgagctgtgattgcaccactgcactccagaccctgtctcaaaaaaaa End editing Edited EST: BU156336, type: ag Aligns to: chrX:73229214-73229762 (++) All mismatches: ag (1), ag (2), ag (5), ag (7), ag (9), ag (10), ag (11), Editing mismatches: 7, all mismatches: 7, alignment length: 549, cluster length: 9, total number of As: 8 Locations in RNA: 1 2 5 7 9 10 11 Locations in genome: 73229214 73229215 73229217 73229219 73229220 73229221 73229222 Upstream nucleotide (in genome): n a a c a a a Upstream nucleotide summary: a: 5, c: 1, g: 0, t: 0, other: 1 Downstream nucleotide (in genome): a a c a a a c Downstream nucleotide summary: a: 5, c: 2, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 3, ac: 2, ag: 0, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chrX:73229214-73229762 (+) aaa-aca-aaacagaaaacccaaaaccctcaaaactaatgttacacttagtatttaaagaatgctttctctgtaagaagaggagcaaggacaggataaaacattcttgccagttctgttcaacagtgtactggaagtatctgtgacattaattgcattgcatatggaaggaaataaaattttttaaataggaagcagcaaaaccttttgcagatgacatggttttgtacatacacaaccccagtggatccaataaatttggattccaataacaagatcatctcagcaagtttttgtgatttaagattacaatccaaaaatcagttgtatttctatatattattaaagaagtcaaaagtgacatcattgaaacatttttatttacaatattattaaggcaaaatactgtgggataaagtgaaattcagcatgaactgtgaataacacaaaatatttgtcagaggagttgaggaatatctacatatgtggaaagacatctcatatttgtggactagaagatttaagcatcgctaggtgcggtggctcacgcct >BU156336:1-549 (+) ggacgcgtggg-agaaaacccaaaaccctcaaaactaatgttacacttagtatttaaagaatgctttctctgtaagaagaggagcaaggacaggataaaacattcttgccagttctgttcaacagtgtactggaagtatctgtgacattaattgcattgcatatggaaggaaataaaattttttaaataggaagcagcaaaaccttttgcagatgacatggttttgtacatacacaaccccagtggatccaataaatttggattccaataacaagatcatctcagcaagtttttgtgatttaagattacaatccaaaaatcagttgtatttctatatattattaaagaagtcaaaagtgacatcattgaaacatttttatttacaatattattaaggcaaaatactgtgggataaagtgaaattcagcatgaactgtgaataacacaaaatatttgtcagaggagttgaggaatatctacatatgtggaaagacatctcatatttgtggactagaagatttaagcatcgctaggtgcggtggctca-gcct End editing Edited EST: AA338602, type: ag Aligns to: chrX:40876488-40876821 (++) All mismatches: ag (11), ag (49), ag (80), ag (92), ag (97), ag (105), ag (109), ag (113), ag (119), ag (196), Editing mismatches: 10, all mismatches: 10, alignment length: 333, cluster length: 187, total number of As: 37 Locations in RNA: 11 49 80 92 97 105 109 113 119 196 Locations in genome: 40876498 40876536 40876567 40876579 40876584 40876592 40876596 40876600 40876606 40876684 Upstream nucleotide (in genome): c c a c c c t t t t Upstream nucleotide summary: a: 1, c: 5, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): c g g c g a g g c c Downstream nucleotide summary: a: 1, c: 4, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 1, cc: 2, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 2, tt: 0, other: 0 >chrX:40876488-40876821 (+) acagggtctcactctgtcagccaggctggagtgcagtggtgcaatctcagctcaccgtagcctcaaactcctgggctcaagcgatcctcccacctcagcctcccaagtagctaggactacgggtgcatgccaccacatttggctaatttttttttttttttttttgcttttggtatagatgaggtcttactatgttacccaggctggtctcaaactcccggcctcaagagatcctcctgccttggcctcccacattcttcctttgatttcttgctggagctcccccttagccaaacacaagcagaagtcagagggacagagagcagggtggagg >AA338602:1-333 (+) acagggtctcgctctgtcagccaggctggagtgcagtggtgcaatctcggctcaccgtagcctcaaactcctgggctcaggcgatcctcccgcctcggcctcccgagtggctgggactgcgggtgcatgccaccacatttggctaatttttttttttttttttt-gcttttggtatagatgaggtcttactatgttgcccaggctggtctcaaactcccggcctcaagagatcctcctgccttggnctcccacattcttcctttgatttcttgctggagctcccccttagccaaacacaagcagaagtcagagggacagagagcagggtggagg End editing Edited EST: M85662, type: ag Aligns to: chr10:28827240-28827506 (+-) All mismatches: ag (71), ag (86), ag (110), ag (116), ag (117), ag (143), ag (172), ag (182), Editing mismatches: 8, all mismatches: 8, alignment length: 267, cluster length: 112, total number of As: 33 Locations in RNA: 71 86 110 116 117 143 172 182 Locations in genome: 28827436 28827421 28827397 28827391 28827390 28827364 28827335 28827325 Upstream nucleotide (in genome): c a a a t t a a Upstream nucleotide summary: a: 5, c: 1, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g a c t a g c c Downstream nucleotide summary: a: 2, c: 3, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 0, at: 1, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr10:28827240-28827506 (+) agtggctcacgccggaatctcagcactttgggaggccgaggcaggcagatcacctgaggtcaggagtttgagaccagcctggccaacgtggtgaaaccctgtctctactacaaatacaaaagttagctggttgcggtggcgagtgcctgtaatcccaactactagggaggctgaggcaggaaaatcacttgaacccaggaggtggaggttgcagtgagctgagattgtgccattgcactccagcctgggagacggattgagaccctg >M85662:1-267 (-) agtggctcacgccggaatctcagcactttgggaggccgaggcaggcagatcacctgaggtcaggagtttgagaccagcctggccagcgtggtgaagccctgtctctactacaaatacaaaagttggctggttgcggtggcgagtgcctgtggtcccagctactagggaggctgaggcaggagaatcacttgaacccgggaggtggaggttgcagtgagctgagattgtgccattgcactccagcctgggagacggattgagaccctg End editing Edited EST: AI206119, type: ag Aligns to: chr10:120983897-120984126 (+-) All mismatches: ag (270), ag (272), ag (312), ag (332), ag (351), ag (356), Editing mismatches: 6, all mismatches: 6, alignment length: 230, cluster length: 87, total number of As: 15 Locations in RNA: 270 272 312 332 351 356 Locations in genome: 120984063 120984061 120984021 120984001 120983982 120983977 Upstream nucleotide (in genome): c t c a c a Upstream nucleotide summary: a: 2, c: 3, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): g c a c c t Downstream nucleotide summary: a: 1, c: 3, g: 1, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 1, ca: 1, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr10:120983897-120984126 (+) atttatt-atttatttatttatttatttatttatttatttattgagacggagtgttgctctgtcgcccaggctggagtgcaatggcacgatctcggctcactgcaaccttctgcctcccaggttcaagcggttctcttgcctcagcgccccgagtagctgggattacaggcgcccgccaccatgcccggctaacttttgcatttttttttagtagagatggggtttcacca >AI206119:207-436 (-) atttattaattta-ttatttatttatttatttatttatttattgagacggagtgttgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcagccttctgcctcccaggttcgagcggttctcttgcctcagcgccccgagtagctgggattgcgggcgcccgccaccatgcccggctaacttttgcatttttttttagtagagatggggtttcacca End editing Edited EST: AI255083, type: ag Aligns to: chr10:76887826-76888136 (+-) All mismatches: ag (47), ag (80), ag (126), ag (132), ag (135), ag (170), ag (176), ag (198), ag (203), ag (216), ag (222), tg (263), Editing mismatches: 11, all mismatches: 12, alignment length: 312, cluster length: 176, total number of As: 41 Locations in RNA: 47 80 126 132 135 170 176 198 203 216 222 Locations in genome: 76888099 76888066 76888020 76888014 76888011 76887976 76887970 76887948 76887943 76887930 76887924 Upstream nucleotide (in genome): t a c t t c t c t c c Upstream nucleotide summary: a: 1, c: 5, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): g g g g g c c g c a g Downstream nucleotide summary: a: 1, c: 3, g: 7, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 1, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 3, tt: 0, other: 0 >chr10:76887826-76888136 (+) ctttaa-tttttttttttttttttttttgagacagagtcgctgtcacctaggctggagtgcaatggcgcgatcttggctcattgcaacctccgcctcccaggttcaagcaattctcctacctcagcctcccgagtagctgggattacaggcacatgctaccacgtccagctaatttttgtatttttagtagagacagcatttcaccatgttggctaggctggtctggaactcctgacctcaagtgatccacctgcctcgacctccaacagtgctaggattacaggcgtgagccaccgcacccgcccttctgt >AI255083:10-321 (-) ctttaattttttttttttttttttttttgagacagagtcgctgtcacctaggctggagggcaatggcgcgatcttggctcattgcaacctccgcctcccgggttcgagcaattctcctgcctcggcctcccgagtagctgggattgcaggcgcatgctaccacgtccagctaatttttgtatttttggtggagacggcatttcaccatgttggctaggctggtctggaactcctgacctcaggtgatccacctgcctcgacctccaacagtgctgggattacaggcgtgagccaccgcacccgcccttctgt End editing Edited EST: BG977497, type: ag Aligns to: chr11:43882239-43882415 (+-) All mismatches: ag (14), ag (39), ag (83), ag (86), ag (87), Editing mismatches: 5, all mismatches: 5, alignment length: 177, cluster length: 74, total number of As: 14 Locations in RNA: 14 39 83 86 87 Locations in genome: 43882402 43882377 43882333 43882330 43882329 Upstream nucleotide (in genome): a a c a t Upstream nucleotide summary: a: 3, c: 1, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): a g g g a Downstream nucleotide summary: a: 2, c: 0, g: 3, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr11:43882239-43882415 (+) tttttttttttggaaactggtctcactgtgtcccctaggcatgtacgatggcatgatcttggctcactgcagcctcaacatcctgggcttaagcagtcctcccacctcagcctcctgagtagctgggtatgttgcccaagctggtctggaactcctgggcttaaatgatcctccggc >BG977497:1-177 (-) tttttttttttggaaactggtctcactgtgtcccctaggcatgtacgatggcatgatcttggctcactgcagcctcaacatcctgggcttgggcggtcctcccacctcagcctcctgagtagctgggtatgttgcccaggctggtctggaactcctgggcttagatgatcctccggc End editing Edited EST: AW804345, type: ag Aligns to: chr11:102287108-102287435 (+-) All mismatches: ag (30), ag (31), ag (32), ag (33), ag (36), ag (37), ag (38), ag (41), ct (42), ag (43), ag (44), ag (47), Editing mismatches: 11, all mismatches: 12, alignment length: 331, cluster length: 17, total number of As: 14 Locations in RNA: 30 31 32 33 36 37 38 41 43 44 47 Locations in genome: 102287435 102287434 102287433 102287432 102287429 102287428 102287427 102287424 102287422 102287421 102287419 Upstream nucleotide (in genome): a a a g a a a c a c c Upstream nucleotide summary: a: 7, c: 3, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): n a a a a a a a c a c Downstream nucleotide summary: a: 8, c: 2, g: 0, t: 0, other: 1 Dinucleotide summary: aa: 5, ac: 1, ag: 0, at: 0, ca: 2, cc: 1, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr11:102287108-102287435 (+) caccactacgtatacaaactggaaagcctggaagaagaaatggataaattctcagaaacacacaacctcccaagactgaaccaagaagaaactgaaaccctgaacagatcaataatgagttctgacataaaatcagtaataaaaaaaaatctaccaatcaggaaaagccttggaccagaccgattcacagtcaagttctaccagacatatattaataaaatataaaattattccaaaaaattaagaagagattctaccctagctcattctataagg-ctagcaa-cattctgataccaaaacctggcaaagacac-aacaaaaaaagaaaa >AW804345:30-360 (-) caccactacgtatacaaactggaaagcctggaagaagaaatggataaattctcagaaacacacaacctcccaagactgaaccaagaagaaactgaaaccctgaacagatcaataatgagttctgacataaaatcagtaataaaaaaaaatctaccaatcaggaaaagccttggaccagaccgattcacagtcaagttctaccagacatatattaataaaatataaaattattccaaaaaattaagaagagattctaccctagctcattctataaggactagcaaacattctgataccaaaacctggcaaagacgctggtgaagggaggggg End editing Edited EST: AA320395, type: ag Aligns to: chr11:927556-927816 (+-) All mismatches: ag (65), ag (121), ag (129), ag (152), ag (153), ag (166), ag (179), ag (208), ag (209), ag (240), ag (251), Editing mismatches: 11, all mismatches: 11, alignment length: 261, cluster length: 187, total number of As: 51 Locations in RNA: 65 121 129 152 153 166 179 208 209 240 251 Locations in genome: 927752 927696 927688 927665 927664 927651 927638 927609 927608 927577 927566 Upstream nucleotide (in genome): t t t a g t a a g g c Upstream nucleotide summary: a: 3, c: 1, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): a t c a a c c g a g g Downstream nucleotide summary: a: 4, c: 3, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 2, gc: 0, gg: 1, gt: 0, ta: 1, tc: 2, tg: 0, tt: 1, other: 0 >chr11:927556-927816 (+) ctatagtcccagcattttgggaggctgaggcaggtggatcttttgagcccagaagtttgagaccagcctgggcaatgtggtaacaccctgtctctacaaaaaaatacgaaaattagctgggcgtattggtgtacacatctatagtcccagctacttgggaggctgagagaggaggatcacttgaccccaggaggttaaggctgcagtgagctgagatcgcgccatactccagcctgggtgacagagtgagacctttctcac >AA320395:1-261 (-) ctatagtcccggcattttggggggctgaggcaggtggatcttttgagcccaggggtttgagaccagcctgggcaatgtggtagcaccctgtctctgcaaaaaaatacgggaattagctgggcgtattggtgtgcacatctgtagtcccagctacttgggaggctgagagaggaggatcacttgaccccaggaggttgaggctgcagtgagctgagatcgcgccatactccagcctgggtgacagagtgagacctttctcac End editing Edited EST: AL712536, type: ag Aligns to: chr11:118876808-118877241 (+-) All mismatches: ag (90), ag (130), ag (157), ag (167), ag (216), ag (235), ag (252), Editing mismatches: 7, all mismatches: 7, alignment length: 434, cluster length: 164, total number of As: 27 Locations in RNA: 90 130 157 167 216 235 252 Locations in genome: 118877153 118877113 118877086 118877076 118877026 118877007 118876990 Upstream nucleotide (in genome): t a t t a t a Upstream nucleotide summary: a: 3, c: 0, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g t c g g c g Downstream nucleotide summary: a: 0, c: 2, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 2, tt: 0, other: 0 >chr11:118876808-118877241 (+) ttttttttgagatggaatcttgctctgtcgccaggctggagtacagtggcgtgatctcagttgactgcaacctctgcctcccaggttcaagcgattctcttgagtagctgggactacaggcacaggccaccacacccaacctttttttttttttttgagatggagtcttgttctgtcacccaagctggagtgcagtggtacgatctcggctcactgcaagctccgcctcctgggttcacgccattctcctgcctcagcctccctgagtagctgggactacaggcgcccgccaccatgcctggctaattttttgtatttttagtagagacggggtttcaccttgttagccaggatggtcttgatctcctgacctcgtgatccgcctgcctcggcctcccaaagtctgggattacaggcgtaagccacca-tgcccg >AL712536:1-434 (-) ttttttttgagatggaatcttgctctgtcgccaggctggagtacagtggcgtgatctcagttgactgcaacctctgcctcccaggttcaagcgattctcttgagtagctgggactacaggcacaggccaccacacccaacctttttttttttttttgagatggagtcttgttctgtcacccaggctggagtgcagtggtgcgatctcggctcactgcaggctccgcctcctgggttcacgccattctcctgcctcagcct-cctgagtggctgggactgcaggcgcccgccaccatgcctggctagttttttgtatttttagtagagacggggtttcaccttgttggccaggatggtcttgatctcctgacctcgtgatccgcctgcctcggcctcccaaagtctgggattacaggcgtaagccaccagtgcccg End editing Edited EST: CB858069, type: ag Aligns to: chr12:122214879-122215351 (+-) All mismatches: ag (237), ag (260), ag (351), ag (354), ag (360), ag (361), ca (380), ag (390), ag (391), ag (397), ag (421), ag (427), Editing mismatches: 11, all mismatches: 12, alignment length: 473, cluster length: 191, total number of As: 33 Locations in RNA: 237 260 351 354 360 361 390 391 397 421 427 Locations in genome: 122215115 122215092 122215001 122214998 122214992 122214991 122214962 122214961 122214955 122214931 122214925 Upstream nucleotide (in genome): g t t g a t a c c c c Upstream nucleotide summary: a: 2, c: 4, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): t g c c c a g a g g a Downstream nucleotide summary: a: 3, c: 3, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 2, cc: 0, cg: 2, ct: 0, ga: 0, gc: 1, gg: 0, gt: 1, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr12:122214879-122215351 (+) gagatgggagtctcgatctgttacccaggctggagtgcagtgacacaatctcagctcactgcaacctctgcctcccaggttcaagtgattctcctgcctcagcctcccgagtaactgggactacaggcgcgtgccaccatgcctggcttttgttttgttttgttttgttttgtatttttagtagagacagggtttcaccatgtttgccaggatagtctcgatctcttgaccttgtgatctgcctgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatgcctggtcaccctgctactttttaatactttttagtagagatggggtctcactatgttgcccaggctggtctccaactcatgggctcaactcatcctcctatcttggcctcccaaagcgctgggattacaggtgtgagccactgtgcctggcctgattacatttttaaaatgagatttccccac >CB858069:1-473 (-) gagatgggagtctcgatctgttacccaggctggagtgcagtgacacgatctcggctcactgcaacctctgcctcccgggttcgggtgattctcatgcctcagcctcccgagtggctggggctgcaggcgcgtgccaccatgcctggcttttgttttgttttgttttgttttgtatttttagtagagacagggtttcaccatgtttgccaggatggtctcgatctcttgaccttgtggtctgcctgcctcagcctcccaaagtgctgggattacaggtgtgagccaccatgcctggtcaccctgctactttttaatactttttagtagagatggggtctcactatgttgcccaggctggtctccaactcatgggctcaactcatcctcctatcttggcctcccaaagcgctgggattacaggtgtgagccactgtgcctggcctgattacatttttaaaatgagatttccccac End editing Edited EST: AA320348, type: ag Aligns to: chr12:112225563-112225844 (+-) All mismatches: ag (90), ag (100), ag (109), ag (125), ag (133), ag (152), ag (197), ag (207), Editing mismatches: 8, all mismatches: 8, alignment length: 284, cluster length: 118, total number of As: 38 Locations in RNA: 90 100 109 125 133 152 197 207 Locations in genome: 112225755 112225745 112225736 112225720 112225712 112225693 112225648 112225638 Upstream nucleotide (in genome): a g c t c a a c Upstream nucleotide summary: a: 3, c: 3, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): t g g t g t c t Downstream nucleotide summary: a: 0, c: 1, g: 3, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 2, ca: 0, cc: 0, cg: 2, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 1, other: 0 >chr12:112225563-112225844 (+) cggtggctcatgcc-tgtaatccc-agcactttgggaggtcgcggcggggggatcacgaggtcaggaaatcgagaccatcctggctaacacggtgaaaccccatctctactaaaaatatatatatataaaaaattagctgggcttggtggcaggcgcctatagtcccagctactcaggaggctgaggcaggagaatggtgtgaacctgggaggtggagcttgcagtgagctgagatcgcgccactgcactccagcctgggcaacagagcgagactctgtctcag >AA320348:1-284 (-) cggtggctcatgccttgtaatcccaagcactttgggaggtcgcggcggggggatcacgaggtcaggaaatcgagaccgtcctggctagcacggtgaaaccccatctctactaaaaatatatatatataaaaagttagctgggcttggtggcgggcgcctgtagtcccagctactcgggaggctggggcaggagagtggtgtgaacctgggaggtggagcttgcagtgagctgagatcgcgccactgcactccagcctgggcaacagagcgagactctgtctcag End editing Edited EST: T58026, type: ag Aligns to: chr14:61261170-61261331 (+-) All mismatches: ag (63), ag (68), ag (82), ag (95), ag (100), Editing mismatches: 5, all mismatches: 5, alignment length: 162, cluster length: 38, total number of As: 10 Locations in RNA: 63 68 82 95 100 Locations in genome: 61261269 61261264 61261250 61261237 61261232 Upstream nucleotide (in genome): c t c t a Upstream nucleotide summary: a: 1, c: 2, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g t g g a Downstream nucleotide summary: a: 1, c: 0, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 1, other: 0 >chr14:61261170-61261331 (+) cccaggagttcgagaccagcctgagcaacatggggagtcccagtctctacaaaaaaataaaaaaattagcagagcgtgacagtgtgtgcttgttatcccagctactgaggagcctgatgtaggacgattgcctgaatctgggagggcaaggctgcagagagc >T58026:1-162 (-) cccaggagttcganaccagcctgagcaacatggggagtcccagtctctacaaaaaaataaaagaattggcagancgtgacggtgtgtgcttgttgtcccggctactgaggagcctgatgtaggacgattgcctgaatctgggagggcaaggctgcagagagc End editing Edited EST: H85015, type: ag Aligns to: chr14:61538106-61538380 (+-) All mismatches: ag (66), ag (102), ag (124), ag (128), ag (131), ag (135), ag (139), ag (142), ag (146), ag (177), ag (191), Editing mismatches: 11, all mismatches: 11, alignment length: 275, cluster length: 126, total number of As: 38 Locations in RNA: 66 102 124 128 131 135 139 142 146 177 191 Locations in genome: 61538315 61538279 61538257 61538253 61538250 61538246 61538242 61538239 61538235 61538204 61538190 Upstream nucleotide (in genome): t t c t a c a a t c c Upstream nucleotide summary: a: 3, c: 4, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): c g g g t a t a c g g Downstream nucleotide summary: a: 2, c: 2, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 2, ca: 1, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 2, tt: 0, other: 0 >chr14:61538106-61538380 (+) aaagattttattggctgggcacagtggctcatgcctgtaatcacagtactttgggaggctgaggtgagtggatcactcgagcccagaaattcaagaccagcctgggcaacatggcaaatccctctctctacaaaaaatacaaaaattagccaggtgtggtggcgtgtggccatagtccgagctacttgcgaggctgaggtgggaggattacatgatcccagggaggttgaggctgcagtgagttgtgattgctctactgcactgtagcctgggtg >H85015:1-275 (-) aaagantttattggctgggcanagtgnctcatgcctgtaatcacagtactttgggaggctgaggtgagtggatcactcgagcccggaaattcaagaccggcctgggcaacatggcaaatccctctctctgcaagaagtacgaaagttggccgggtgtggtggcgtgtggccatggtccgagctacttgcgaggctgaggtgggaggattgcatgnncccagggaggttgaggctgcagtgagttgtgattgctctactgcactgtagcctgggtg End editing Edited EST: DA980933, type: ag Aligns to: chr14:106552675-106552809 (+-) All mismatches: ag (103), ag (105), ag (119), ag (131), ag (134), Editing mismatches: 5, all mismatches: 5, alignment length: 134, cluster length: 33, total number of As: 17 Locations in RNA: 103 105 119 131 134 Locations in genome: 106552707 106552705 106552691 106552678 106552675 Upstream nucleotide (in genome): a a a g n Upstream nucleotide summary: a: 3, c: 0, g: 1, t: 0, other: 1 Downstream nucleotide (in genome): t a a a t Downstream nucleotide summary: a: 3, c: 0, g: 0, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr14:106552675-106552809 (+) atgaatcaccttttaaaatagccaaaaggaaaatccagctcagtcccaactccatggtgagtcctctgtgttcagtgctgatcactgaatggaaacacctgggaatctcagggctggggctcctctcccagagct >DA980933:1-134 (-) gtgga-caccttttaagatagccaaaaggagagtccagctcagtcccaactccatggtgagtcctctgtgttcagtgctgatcactgaatggaaacacctgggaatctcagggctggggctcctctcccagagct End editing Edited EST: AW511513, type: ag Aligns to: chr14:39741092-39741555 (+-) All mismatches: ag (80), ag (111), ag (120), ag (121), ag (139), ag (151), ag (166), ag (178), ag (186), Editing mismatches: 9, all mismatches: 9, alignment length: 464, cluster length: 107, total number of As: 32 Locations in RNA: 80 111 120 121 139 151 166 178 186 Locations in genome: 39741476 39741445 39741436 39741435 39741417 39741405 39741390 39741378 39741370 Upstream nucleotide (in genome): g t a t c a t g a Upstream nucleotide summary: a: 3, c: 1, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): a c t a t a c a c Downstream nucleotide summary: a: 4, c: 3, g: 0, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 1, ga: 2, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 0, tt: 0, other: 0 >chr14:39741092-39741555 (+) gagggaatgcagggggtggttcccctaccagaaggcaggaaagtccccctgtgtggctgggtctgcggccttttgtggactcagaatggggagtgcatgctgattggtttgtgagtatgcaaaaaaggttaaagcaaagacaccacttagaggtgggcgtgacaatgtagacaactaattaggaggccgggtgcggtggctcatgcctgtaatcccagcactttgggaggctgatgggggtggatcacgaggtcaggagtttgagaccagcctggccaacatggtgaaacccttctctactaaagatacaaaaaattagctgagcatggtggtgtgcgtctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggcggaggttgccgtgagctgagattgcgccattgcactccatcctgggtgacagggcgagactccatccc >AW511513:1-464 (-) gagggaatgcagggggtggttcccntaccagaaggcaggaaagtccccctgtgtggctgggtctgcggccttttgtggactcagaatggggagtgcatgctgattggtttgtgagtatgcaaaaaaggttaaagcaaagacaccacttagaggtgggcgtgacaatgtagacaactaattaggaggccgggtgcggtggctcatgcctgtaatcccagcactttgggaggctgatgggggtggatcacgaggtcaggagtttgagaccagcctggccagcatggtggaacccttctctgctaaagatacaaaagattagctgagcgtggtggtgtgcgtctgtggtcccagctgctcaggaggctgaggcaggagaatcgcttggacccgggaggcggaggttgccgtgagctgagattgcgccattgcactccatcctgggtgacagggcgagactccatccc End editing Edited EST: AI056792, type: ag Aligns to: chr14:67834401-67834553 (+-) All mismatches: ag (76), ag (81), ag (116), ag (149), ag (151), Editing mismatches: 5, all mismatches: 5, alignment length: 152, cluster length: 77, total number of As: 12 Locations in RNA: 76 81 116 149 151 Locations in genome: 67834478 67834473 67834438 67834404 67834402 Upstream nucleotide (in genome): c g c a a Upstream nucleotide summary: a: 2, c: 2, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): g g g t a Downstream nucleotide summary: a: 1, c: 0, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr14:67834401-67834553 (+) aaaattagctgggcgtggtggtgcaccctgtagtcccagcttctcgggcggctgaggtagggggatggtttgagcccaggaggcggaggctgcagtgagccaagattgcaccgctgcactccaacctgggtgatagaaccagaccttgtctca >AI056792:1-152 (-) agag-tagctgggcgtggtggtgcaccctgtagtcccggcttctcgggcggctgaggtagggggatggtttgggcccgggaggcggaggctgcagtgagccaagattgcaccgctgcactccaacctgggtgatagaaccagaccttgtctca End editing Edited EST: BX480874, type: ag Aligns to: chr15:59292142-59292594 (+-) All mismatches: ag (91), ag (93), ag (106), ag (129), ag (133), ag (155), ag (163), ga (173), ag (184), ag (209), ag (213), Editing mismatches: 10, all mismatches: 11, alignment length: 454, cluster length: 123, total number of As: 24 Locations in RNA: 91 93 106 129 133 155 163 184 209 213 Locations in genome: 59292504 59292502 59292489 59292466 59292462 59292440 59292432 59292411 59292386 59292382 Upstream nucleotide (in genome): c t a c c t t t c g Upstream nucleotide summary: a: 1, c: 4, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g c g g g c g g g g Downstream nucleotide summary: a: 0, c: 2, g: 8, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 2, tg: 2, tt: 0, other: 0 >chr15:59292142-59292594 (+) actccataatgagaacagcaccaaagggatggtgctgaaccattagaaattgcccagataatccagtcacctccaggcaggccccacctccaacaatgggaattacactttgacctgagatttggttgaggacacagatccagaccatatcaataagtatcagtagatataacccatataataaaagctttttcagatcttccagtgattttttttttccc-ttttttttttttttttttgagacagggtctctctctgttacccaggctagagtgcagtggtgagatcttagttcactacattctctgcctcctgggctcaggcagtcctcccacttcagcctcccaagtagctgggactacaggcatgtaccaccacacttggctcatttttctatttttagtagagacgggtttcaccatgttgtccaggctgatctcaaactgctaggca >BX480874:1-454 (-) actccataatgagaacagcaccaaagggatggtgctgaaccattagaaattgcccagataatccagtcacctccaggcaggccccacctccaacaatgggaattacactttgacctgagatttggttgaggacacagatccagaccatatcaataagtatcagtagatataacccatataataaaagctttttcagatcttccagtgattttttttttccctttttttttttttttttttgggacggggtctctctctgttacccaggctggagtgcagtgatgagatcttggttcactgcattctctgcctcctgggctcgggcggtcctcccacttcagcctcccaggtagctgggactgcgggcatgtaccaccacacttggctcatttttctatttttagtagagacgggtttcaccatgttgtccaggctgatctcaaactgctaggca End editing Edited EST: AA358384, type: ag Aligns to: chr15:25228686-25228935 (+-) All mismatches: ag (79), ag (85), ag (94), ag (120), ag (142), Editing mismatches: 5, all mismatches: 5, alignment length: 249, cluster length: 64, total number of As: 15 Locations in RNA: 79 85 94 120 142 Locations in genome: 25228856 25228850 25228841 25228815 25228793 Upstream nucleotide (in genome): a c c a a Upstream nucleotide summary: a: 3, c: 2, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): c c g t g Downstream nucleotide summary: a: 0, c: 2, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 1, ca: 0, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr15:25228686-25228935 (+) cccagcactttgggaggctgagttgggtggatcacctgacatcaggagtttgagactagcctggccaacatagcaataccctgtctcaaagatacaaaaattacccaagcttggtggtgtgtgtctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggcggcaaaggttgcagtgagccgagaccatgccactgcactccagcctgggtgacagagtgagactccgtctgg >AA358384:1-249 (-) cccagcactttgggaggctgagttgggtggatcacctgacatcaggagtttgagactagcctggccaacatagcaataccctgtctcaaagatacaaaaattacccaggcttggtggtgtgtgtctgtagtcccagctactcaggaggctgaggcgggagaatcgcttgagcctgggcggcaaaggttgcagtgagccgagaccatgccactgcactccagcctgggtgacagagtgan-ctccgtctgg End editing Edited EST: AA488903, type: ag Aligns to: chr15:74796131-74796448 (+-) All mismatches: ag (88), ag (93), ag (94), ag (116), ag (120), Editing mismatches: 5, all mismatches: 5, alignment length: 318, cluster length: 33, total number of As: 12 Locations in RNA: 88 93 94 116 120 Locations in genome: 74796363 74796358 74796357 74796335 74796331 Upstream nucleotide (in genome): c a t a t Upstream nucleotide summary: a: 2, c: 1, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g a a g g Downstream nucleotide summary: a: 2, c: 0, g: 3, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr15:74796131-74796448 (+) aggccgactaatattccgctgcatcttgctgggcacagtggctcatgcctgaaatccaagcacttcgggagcttgaggtgggtgaatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaattagccaggtgtggtggcgcatgtctgtaatcccagctatttaggaaggtgaggcaggagaatggtttaaacccaggagatggaggctgcagtgagctgagatggcgccattgcactccaggctggaaaacaagggcaaaactacatctctaaaaaaaaa >AA488903:3-320 (-) aggccgactaatattccgctgcatcttgctgggcacagtggctcatgcctgaaatccaagcacttcgggagcttgaggtgggtgaatcacttgaggtcaggagtttgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaattagccaggtgtggtggcgcatgtctgtaatcccagctatttgggagggtgaggcaggagaatggtttggacccgggagatggaggctgcagtgagctgagatggcgccattgcactccaggctggaaaacaagggcaaaactacatctctaaaaaaaaa End editing Edited EST: DB304459, type: ag Aligns to: chr16:75712386-75712824 (+-) All mismatches: ag (52), ag (69), ag (76), ag (80), ag (98), ag (110), ag (119), ag (120), ag (130), ag (182), ag (186), Editing mismatches: 11, all mismatches: 11, alignment length: 439, cluster length: 135, total number of As: 35 Locations in RNA: 52 69 76 80 98 110 119 120 130 182 186 Locations in genome: 75712773 75712756 75712749 75712745 75712727 75712715 75712706 75712705 75712695 75712643 75712639 Upstream nucleotide (in genome): c c c a g t a t t a t Upstream nucleotide summary: a: 3, c: 3, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): a g g c g c t a t t g Downstream nucleotide summary: a: 2, c: 2, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 2, ca: 1, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 1, tt: 1, other: 0 >chr16:75712386-75712824 (+) taagggaccgctgactgaaactgacccaatagtttcattgacagcctttttttttgataaactagaaatgggctcttcttgtcttaaagcttgaaacttatggttttatgtgagtttttatttttttatttttaggaaagaactcccaggcctctcaaaaagtattaaagaactaaaacttggccaggcacagtggcttacgcctttaatcccagcaccttgggatgctgagacgggtggattactcaaggttaggaattccagaccaacctaatcaacatggtgaaaagactagctgggcgtggttgtatgtgcttgtaatccctgctactgggtggctgaggcaggaggaggcttgaacccaggaggcagaggttgcagtgagccaagatcatgcctctgcactccagcctgggtaacagagtgagacgccagtctc >DB304459:1-439 (-) taagggnccgntgactgaaactgacccaatagtttcattgacagcctttttttttgataaactagaaatgggctcttcttgtcttaaagcttgaaacttatggttttatgtgagtttttatttttttatttttaggaaagaactcccaggcctctcaaaaagtattaaagaactaaaacttggccaggcacagtggcttacgcctttaatcccagcaccttgggatgctgagacgggtggattactcaaggttgggagttccagaccaacctaatcaacatggtgaaaagactagctgggcgtggttgtgtgtgcttgtggtccctgctgctgggtggctggggcaggaggaggcttgagcccgggaggcggaggttgcagtgagccgagatcatgcctctgcactccagcctgggtaacagagtgagacgccagtctc End editing Edited EST: BQ477307, type: ag Aligns to: chr16:31057339-31057711 (+-) All mismatches: ag (290), ag (299), ag (307), ag (308), ag (312), ag (334), ag (344), ag (347), ag (348), Editing mismatches: 9, all mismatches: 9, alignment length: 372, cluster length: 59, total number of As: 15 Locations in RNA: 290 299 307 308 312 334 344 347 348 Locations in genome: 31057692 31057683 31057675 31057674 31057670 31057648 31057638 31057635 31057634 Upstream nucleotide (in genome): t t a t c t t a c Upstream nucleotide summary: a: 2, c: 2, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): g t t a g c g g a Downstream nucleotide summary: a: 2, c: 1, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 1, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 1, other: 0 >chr16:31057339-31057711 (+) aggctttaggtaaagaactggggaaagggagtattggtagcatgctgtcactactattgcatgcatttgaggagttactagaagaaagagatgactcagaaattaaatggtcagtttataagcagaaatggaagagaatatagaaattcgaggcaagtgatccacattttcagtaaaagatacaactgagaaagtccttgagccacaaggttttcgtttttgtttttgagacagtcttgctcttgtttccaaggccaccttctgggttcaagcctttctcctgactcagcctcccaagtagctgggattacaggcgtgcaccaccacgctcagctaatttttgtattttcagtagagacaggtttcaccatgt >BQ477307:272-643 (-) aggctttaggtaaagaactggggaaagggagtattggtagcatgctgtcactactattgcatgcatttgaggagttactagaagaaagagatgactcagaaattaaatggtcagtttataagcagaaatggaagagaatatagaaattcgaggcaagtgatccacattttcagtaaaagatacaactgagaaagtccttgagccacaaggttttcgtttttgtttttgagacagtcttgctcttgtttccaaggccaccttctgggttcaagcctttctcctgactcagcctcccgggtggctgggattgcaggcgtgcaccaccacgctcggctggtttttgtgttttcagtggagacaggtttcacc-tgt End editing Edited EST: AA708237, type: ag Aligns to: chr16:69101116-69101421 (+-) All mismatches: ag (116), ag (130), ag (152), ag (172), ag (175), ag (181), ag (186), ag (196), Editing mismatches: 8, all mismatches: 8, alignment length: 305, cluster length: 81, total number of As: 26 Locations in RNA: 116 130 152 172 175 181 186 196 Locations in genome: 69101306 69101292 69101270 69101250 69101247 69101241 69101236 69101226 Upstream nucleotide (in genome): c t c t t c a a Upstream nucleotide summary: a: 2, c: 3, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g a g a c t c c Downstream nucleotide summary: a: 2, c: 3, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 0, ca: 0, cc: 0, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr16:69101116-69101421 (+) tttttattagctgaggctgggcacggtggctcatgcctgttatcccagcactttgggaggccaagacgggtggatcacctgaggtcaggcattcgagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaaaattagccaggcgtgttggcgggtgcctgtaatcccagctactcaggaggctgaggcaggagaatcgcttgaacctggagacctgggaggtgaaggttgcagtgagccaagattgcgccactgaactccagcctaggcaacaagagcaaaactccatctc >AA708237:1-305 (-) tttttattagctgaggctgggcacggt-gctcatgcctgttatcccagcactttgggaggccaagacgggtggatcacctgaggtcaggcattcgagaccatcctggccagcatggtgaagccccgtctctgctgaaaatacaaaaaattagccgggcgtgttggcgggtgcctgtgatcccagctactcgggaggctgaggcaggagaatcgcttgaacctggagacctgggaggtgaaggttgcagtgagccaagattgcgccactgaactccagcctaggcaacaagagcaaaactccatctc End editing Edited EST: DW428055, type: ag Aligns to: chr17:75197563-75197830 (+-) All mismatches: cg (54), ag (105), ag (107), ag (110), ag (155), ag (168), ag (178), ag (203), ag (208), ag (221), ag (245), Editing mismatches: 10, all mismatches: 11, alignment length: 268, cluster length: 141, total number of As: 28 Locations in RNA: 105 107 110 155 168 178 203 208 221 245 Locations in genome: 75197735 75197733 75197730 75197685 75197672 75197662 75197637 75197632 75197619 75197595 Upstream nucleotide (in genome): t c c c t t a c c a Upstream nucleotide summary: a: 2, c: 5, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): t t c c c g t a c g Downstream nucleotide summary: a: 1, c: 4, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 1, cc: 3, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 1, other: 0 >chr17:75197563-75197830 (+) cgctctgtccccaaggctggagtccagtggcaagatctcagcctactgcaccctccaccttccgggttcaagcaattctcccgcctcagcctcccgagtagttgggactacaggtgtgcaccaccacgcccggctactttttgtatttttagtagagatggggtttcaccatattggccaggctggtctcgaactcctgacctcgtgatctgcccaccttggcctccaaaagtgcaggaattacaggcgtgagccattgcgcccggcc >DW428055:10-277 (-) cgctctgtccccaaggctggagtccagtggcaggatctcagcctactgcaccctccgccttccgggttcgagcagttctcccgcctcagcctcccgagtggttgggactgcaggtgtgcaccgccacgcccggctactttttgtatttttagtagagatggggtttcgccgtgttggccaggctggtctcgaactcctgacctcgtgatctgcccaccttggcgtccaaaagtgcaggaattacaggcgtgagccattgcgcccggcc End editing Edited EST: DW431565, type: ag Aligns to: chr17:26928204-26928462 (+-) All mismatches: ag (109), ag (153), ag (169), ag (208), ag (209), ag (215), Editing mismatches: 6, all mismatches: 6, alignment length: 259, cluster length: 107, total number of As: 24 Locations in RNA: 109 153 169 208 209 215 Locations in genome: 26928363 26928319 26928303 26928264 26928263 26928257 Upstream nucleotide (in genome): c c t a c t Upstream nucleotide summary: a: 1, c: 3, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): t c c g a g Downstream nucleotide summary: a: 1, c: 2, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 1, cc: 1, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr17:26928204-26928462 (+) cccaggctggagtgcagtggcacgatctcacctccctgcaacctccacctcctaggctcaagcgatccttctgcctcagcctcccaaggagctgggattacaggcatgtgccaccacgcctggctaatttttgtatttttagtagagacaggtttcaccatgttagccaggctagtcttgaactcctgagctcaggagatccacccgcctcagcctcccaaagtgctgggattacagacatgagccactctacccggcc >DW431565:10-268 (-) cccaggctggagtgcagtggcacgatctcacctccctgcaacctccacctcctgggctcgggcgatccttctgcctcagcctcccaaggagctgggattgcaggcatgtgccaccgcgcctggctaatttttgtatttttagtagagacaggtttcaccgtgttagccaggctagtcttgaactcctgagctcaggagatccacccgcctcagcctcccaaagtgctgggattacagacatgagccactctacccggcc End editing Edited EST: BX641883, type: ag Aligns to: chr17:65377569-65377860 (+-) All mismatches: ag (57), ag (72), ag (94), ag (139), ag (149), ag (199), ag (209), ag (215), ag (252), Editing mismatches: 9, all mismatches: 9, alignment length: 294, cluster length: 196, total number of As: 34 Locations in RNA: 57 72 94 139 149 199 209 215 252 Locations in genome: 65377804 65377789 65377767 65377722 65377712 65377662 65377652 65377646 65377609 Upstream nucleotide (in genome): c t t t t c c c a Upstream nucleotide summary: a: 1, c: 4, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a g g c g a g a t Downstream nucleotide summary: a: 3, c: 1, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 3, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr17:65377569-65377860 (+) aacttgtttctctctc--ttttttttttttttttgagacggaatctccctctgtctcccaggctggagcgcagtggtgcaatctcagctcactgcaaggtccacctcccgggttcacgcgagtctcctgcctcagcctcccgagtagctgggactacaggcgccagccaccgcaccctgctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcaatctcctgacctcgcgatccgcccgccttggcctcccaaaggcgtgagccaccgcg >BX641883:1-294 (-) aacttgtttctctctcttttttttttttttttttgagacggagtctccctctgtctcccaggctggagcgcagtggtgcgatctcggctcactgcgaggtccacctcccgggttcacgcgagtctcctgcctcagcctcccgagtggctgggactgcaggcgccagccaccgcaccctgctaattttttgtatttttagtggagacggggtttcaccgtgttggccaggatggtctcgatctcctgacctcgcgatccgcccgccttggcctcccaaaggcgtgagccaccgcg End editing Edited EST: CA943354, type: ag Aligns to: chr18:47347329-47347749 (+-) All mismatches: ag (67), ag (74), ag (78), ag (79), ag (80), ag (119), ag (142), ag (146), ag (163), ag (182), Editing mismatches: 10, all mismatches: 10, alignment length: 422, cluster length: 116, total number of As: 41 Locations in RNA: 67 74 78 79 80 119 142 146 163 182 Locations in genome: 47347683 47347676 47347672 47347671 47347670 47347631 47347608 47347604 47347587 47347568 Upstream nucleotide (in genome): c c a a t a c t t t Upstream nucleotide summary: a: 3, c: 3, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g g c a a t g g a g Downstream nucleotide summary: a: 3, c: 1, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 1, ca: 0, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 2, tt: 0, other: 0 >chr18:47347329-47347749 (+) tcagtgactcttaaatggaataagtgggcaactttctcatttg-tttttattaatctttctcaaatgtatatatagctttcatttcagtgtttaattctagaagtgttttggtctttatttagaagtttgttgatgttttggccgggcatggtggctcatacctctaatcccagcactttgggaggccgaggcaggcagatcactgggggctaggagtttgagaccagccgggacagcatagtgaaaccccatctctataaaaatacaaaaaaattagccaggcatggtggcggacgcctgtaatcccagttactcgggaggctgaggaggaagaatcacttaaacccaggaggcagaggttgcagtgagctgagatcttgccattgccctccagcctgagcaacagagcaagactccatct >CA943354:1-422 (-) tcagtgactcttaaatggaataagtgggcaactttctcatttgttttttattaatctttctcaaatgtatatatagctttcatttcagtgtttaattctagaagtgttttggtctttatttagaagtttgttgatgttttggccgggcatggtggctcatacctctaatcccagcactttgggaggccgaggcaggcagatcactgggggctaggagtttgagaccagccgggacagcatggtgaaaccccatctctatgaaaatacaaaaaaattggccgggcatggtggcggacgcctgtagtcccagttactcgggaggctgaggaggaagaatcacttgggcccgggaggcggaggttgcagtgagctgagatcttgccattgccctccagcctgagcaacagagcaagactccatct End editing Edited EST: H90157, type: ag Aligns to: chr19:58228931-58229227 (+-) All mismatches: ag (42), ag (47), ag (60), ag (86), ag (99), ag (100), ag (108), Editing mismatches: 7, all mismatches: 7, alignment length: 300, cluster length: 67, total number of As: 19 Locations in RNA: 42 47 60 86 99 100 108 Locations in genome: 58229186 58229181 58229168 58229142 58229129 58229128 58229120 Upstream nucleotide (in genome): t t a t a t c Upstream nucleotide summary: a: 2, c: 1, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a c g g t a t Downstream nucleotide summary: a: 2, c: 1, g: 2, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 0, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 1, tt: 0, other: 0 >chr19:58228931-58229227 (+) agttcacaaataaatga-cagttcattttaagaaattaggaaaa-ccagccaggcatg-ctggctcatgcctgtaatcccagtgctttgggatcacttgaagccaggagttcaagaccagcttgagcaatacagtgagactccatctccaaaaacaaaaacaaacaaaaaagttagccaggtgtgatggcacatgcctgtaatcgcagctacttaggaggctgaggattacttgagcccaagagttcaaggttacagtaagctatcatagtgccactgcattctatcctgggttgacaga >H90157:1-300 (-) agttcncaaataaatgaccagttcattttnagaaattaggaaaacccagccaggcatgcctggctcatgcctgtaatcccagtgctttgggatcacttgaagccaggagttcaagaccagcttgagcaatacagtgagactccatctccaaaaacaaanncaaacaaaaaagttagccaggtgtgatggcacgtgcctgtggtcgcagctacttgggaggctgaggattacttgagcccaggagttcaaggttgcagtgagctatcatagtgccactgcattctatcctgggttgacaga End editing Edited EST: DB296882, type: ag Aligns to: chr19:14833607-14834161 (+-) All mismatches: ag (357), ag (379), ag (382), ag (415), ag (425), ag (435), ag (484), ag (500), ag (508), ag (543), Editing mismatches: 10, all mismatches: 10, alignment length: 554, cluster length: 187, total number of As: 34 Locations in RNA: 357 379 382 415 425 435 484 500 508 543 Locations in genome: 14833805 14833783 14833780 14833747 14833737 14833727 14833678 14833662 14833654 14833619 Upstream nucleotide (in genome): t t t t t t a a a g Upstream nucleotide summary: a: 3, c: 0, g: 1, t: 6, other: 0 Downstream nucleotide (in genome): g g g c c g c t t c Downstream nucleotide summary: a: 0, c: 4, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 2, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 2, tg: 4, tt: 0, other: 0 >chr19:14833607-14834161 (+) tgtgtttttgagacggagtcttgctgtgttgcccaggctggagtgcaatggcgcaatcttggcttaccgcaacctccgcctccccggttcaagtgattctcctgcctcagcctcctgagtagctgggactacaggcgcataccaccatgcctggctaatttttttgtatttttagtagagatggggtttcaccatgttagccaggatggtcttgatctcctgaccttgtgatctgcctgccttagcctcccaaagtgctgggattacaggtgtgagccaccatgcccagccaagttaatttttatatatggagtaagaaaagagtccaacttcattcttttgcatgtgcatatccagttttcccagcaccatttgttgaagactgtcctttccccattgaatggtcttggcacccttgtcaaaattcatttgactataaatgtgaggttttatttctgggctccctcctcgattccattggtctatatgtcttatctttatgccattaccgtattgtgttgattactgtagttttacaataaattttgaaataag >DB296882:1-554 (-) tgtg-ttttgaggcgnagtcttgctgtgttgcccaggctgnagtgcagtggcgcagtcttggcttaccgcagcntccgcctccccggttcaagtgattctcctgcctcagcctcctgagtggctgggactgcaggcgcatgccaccatgcctggctaatttttttgtatttttggtggagatggggtttcaccatgttggccaggatggtcttgatctcctgaccttgtgatctgcctgccttagcctcccaaagtgctgggattacaggtgtgagccaccatgcccagccaagttaatttttatatatggagtaagaaaagagtccaacttcattcttttgcatgtgcatatccagttttcccagcaccatttgttgaagactgtcctttccccattgaatggtcttggcacccttgtcaaaattcatttgactataaatgtgaggttttatttctgggctccctcctcgattccattggtctatatgtcttatctttatgccattaccgtattgtgttgattactgtagttttacaataaattttgaaataag End editing Edited EST: BU074524, type: ag Aligns to: chr19:13279340-13279488 (+-) All mismatches: ag (72), ag (116), ag (118), ag (121), ag (130), Editing mismatches: 5, all mismatches: 5, alignment length: 149, cluster length: 59, total number of As: 18 Locations in RNA: 72 116 118 121 130 Locations in genome: 13279416 13279372 13279370 13279367 13279358 Upstream nucleotide (in genome): c a a t t Upstream nucleotide summary: a: 2, c: 1, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g a a c c Downstream nucleotide summary: a: 2, c: 2, g: 1, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 0, tt: 0, other: 0 >chr19:13279340-13279488 (+) tggt-gaaaccctgactctactagaaatacaaaaattagctggtggtggtggcatgcacctgtagccccagctactcaggaggctgactcaggataatcaggaacccgggaggaggaggtttcattgctccagactttgagactccatct >BU074524:1-149 (-) tggtggaaaccctgactctgctagaaatgcagagattagctggtggtggtggcatgcacctgtagccccagctactcgggaggctgactcaggataatcaggaacccgngaggaggaggtttcattgctccagactt-gagactccatct End editing Edited EST: M77919, type: ag Aligns to: chr1:29317917-29318225 (+-) All mismatches: ag (153), ag (172), ag (175), ag (206), ag (228), ag (231), ag (265), ag (266), ag (267), Editing mismatches: 9, all mismatches: 9, alignment length: 310, cluster length: 114, total number of As: 43 Locations in RNA: 153 172 175 206 228 231 265 266 267 Locations in genome: 29318073 29318054 29318051 29318020 29317999 29317996 29317962 29317961 29317960 Upstream nucleotide (in genome): t a t c t c a a t Upstream nucleotide summary: a: 3, c: 2, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g a c a g c t a a Downstream nucleotide summary: a: 4, c: 2, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 1, ca: 1, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr1:29317917-29318225 (+) aaaatcatggattttggggctgagtgtggtggctcatgcctgtaaatccagcactctgggagactgaggcaggaggatcactagagccccggagtt-cgagaccaacctgggcaacatggagaaacaccatctctacaaaaaagtaaaaaactagctaggcatggtggctctcctgtagtcccagctacttgggatgttgaggtgggaggatcacttgagtctgagaggtcgaggctgcattgagccatgattatgtcactgcactccagcctgggtgatagagtgagactcttgtctcaaaaaaaaaaa >M77919:1-310 (-) aaaatcatggattttggggctgagtgtggtggctcatgcctgtgggtccagcactctgggagactgaggcaggaggatcgctggagccccggagttccgagaccgacctgggcaacatggagaaacaccatctctgcagaaaagtnaaaaactagctgggcatggtggctctcctgtagtcccagctacttgggatgttgaggtgggaggatcacttgagtctgagaggtcgaggctgcattgagccatgattatgtcactgcactccagcctgggtgatagagtgagactcttgtctcaaaaaaaaaaa End editing Edited EST: BX424499, type: ga Aligns to: chr1:43827859-43827985 (+-) All mismatches: ga (208), ga (209), ga (221), ga (225), ga (300), Editing mismatches: 5, all mismatches: 5, alignment length: 126, cluster length: 93, total number of Gs: 19 Locations in RNA: 208 209 221 225 300 Locations in genome: 43827962 43827961 43827949 43827945 43827870 Upstream nucleotide (in genome): g t a t t Upstream nucleotide summary: a: 1, c: 0, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): c g t g c Downstream nucleotide summary: a: 0, c: 2, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr1:43827859-43827985 (+) tccacaggtgtgctccatcctctggtctccccattacaaggagctcatctcaggccatggctttgcacagaaccagctagttatttggaagtacccaaccatggccaaggtggctgaactcaaaggt >BX424499:185-310 (-) tcc-caggtgtactccatcctctggtctccccattacaaggagctcatytcaggccatggctttgcacagaaccagctagttatttaraaatacccaaccataaccaaggtggctgaactcaaaggt End editing Edited EST: BF676808, type: ag Aligns to: chr1:39460368-39460654 (+-) All mismatches: ag (91), ag (129), ag (201), ag (208), ag (220), ag (230), ag (233), ag (236), Editing mismatches: 8, all mismatches: 8, alignment length: 288, cluster length: 145, total number of As: 33 Locations in RNA: 91 129 201 208 220 230 233 236 Locations in genome: 39460564 39460527 39460455 39460448 39460436 39460426 39460423 39460420 Upstream nucleotide (in genome): t t c c c g c t Upstream nucleotide summary: a: 0, c: 4, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): c a g c c t t g Downstream nucleotide summary: a: 1, c: 3, g: 2, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 2, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr1:39460368-39460654 (+) tttttttttttgagatgacgtttcgctcttgttgcccaggctggagtgcagtagcatgatctcggctcactgcaacttccacctcccagactcaagcgattctcctgccttagcctcccagaacgctgggattacaggcgcatgccaccattctcagctaatttttgtattttta-gtggagatagggtttcatcatactggtcaggctggtctcaaacacctgacctcaggtgatccgcctgcctcagactcccaaagtgctgggattacaggcatgagccaccaca >BF676808:1-288 (-) tttttttttttgagatgacgtttcgctcttgttgcccaggctggagtgcagtggcgtggtctcggctcgctgcaacttccgcctcccggactcaagcgattctcctgccttagcctcccagaacgctgggattacaggcgcatgccaccattctcagctgatttttgtatttttacgtggagatagggtttcatcatgctggtcaggctggtctcaaacacctgacctcaggtgatccgcctgcctcagactcccaaagtgctgggattacaggcatgagccaccaca End editing Edited EST: DB338236, type: ag Aligns to: chr20:36311240-36311636 (+-) All mismatches: ag (37), ag (68), ac (85), ag (98), ag (99), ag (120), ag (151), ag (165), ag (201), ag (202), ag (229), ag (232), Editing mismatches: 11, all mismatches: 12, alignment length: 397, cluster length: 196, total number of As: 55 Locations in RNA: 37 68 98 99 120 151 165 201 202 229 232 Locations in genome: 36311600 36311569 36311539 36311538 36311517 36311486 36311472 36311436 36311435 36311408 36311405 Upstream nucleotide (in genome): t c a t a a t a c c a Upstream nucleotide summary: a: 5, c: 3, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): c g g a t a t g a g g Downstream nucleotide summary: a: 3, c: 1, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 3, at: 1, ca: 1, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 1, other: 0 >chr20:36311240-36311636 (+) ctaggtcctatgggggcaggggtgttcattctcaggcacctctgacctgcttcacaggcgggaagagtgtgctccagagttgttaaagaaagtctttaggtaaagagacacagtgggctgggcacagtggctcacgcctgtaatcccaacactttgggaggccaaagcaggtggatcacctgaggtcaggagttcaagaccagcctgaccaacatggtgaaaccccgtctctattaaaaatacaaaaatcagctgggagtggtggtgggtgcctgtaatcccagctccttgggaggctaaggcaggagaatcacctgaaccagggaggcagaggttgcagtgagccgagattgcgccactacactccagcctgggtgacagagtaagactctgtctt >DB338236:1-397 (-) ctaggtcctatgggggcaggggtgttcattctcaggcacctctgacctgcttcacaggcgggaagagtgtgctccagagttgttaaagaaagtctttaggtaaagagacacagtgggctgggcacagtggctcacgcctgtaatcccaacactttgggaggccaaggcgggtggatcacctgaggtcaggagttcgggaccagcctgaccaacatggtgaaaccccgtctctgttaaaaatacaaagatcagctgggagtggtggtgggtgcctgtagtcccagctccttgggaggctggggcaggagaatcccctgaaccagggaggcggaggttgcagtgagccgagattgcgccactgcactccagcctgggtgacagagtaagactctgtctt End editing Edited EST: DW434131, type: ag Aligns to: chr20:32591494-32591744 (+-) All mismatches: ag (35), ag (143), ag (167), ag (169), ag (179), ag (182), Editing mismatches: 6, all mismatches: 6, alignment length: 251, cluster length: 148, total number of As: 26 Locations in RNA: 35 143 167 169 179 182 Locations in genome: 32591719 32591611 32591587 32591585 32591575 32591572 Upstream nucleotide (in genome): t t c t t a Upstream nucleotide summary: a: 1, c: 1, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): c a g c g g Downstream nucleotide summary: a: 1, c: 2, g: 3, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 2, tg: 1, tt: 0, other: 0 >chr20:32591494-32591744 (+) ggagtgcagtggcgggatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccactacgcctggctaattttttgtatttttagtagagacagggtttcaccgttttagccgggatggtctcgatctcctgacctcgtgatccgcccgcctccgcctcccaaagtgctgggattacaggcgtgagccaccgtgcccggcc >DW434131:10-260 (-) ggagtgcagtggcgggatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccaggtggctgggactgcgggcgcccgccactacgcctggctgattttttgtatttttagtagagacagggtttcaccgttttagccgggatggtctcgatctcctgacctcgtgatccgcccgcctccgcctcccaaagtgctgggattgcaggcgtgagccaccgtgcccggcc End editing Edited EST: AI888833, type: ag Aligns to: chr20:51999499-51999804 (+-) All mismatches: ag (91), ag (97), ag (114), ag (118), ag (130), ag (150), ag (181), ag (191), ag (234), Editing mismatches: 9, all mismatches: 9, alignment length: 306, cluster length: 144, total number of As: 39 Locations in RNA: 91 97 114 118 130 150 181 191 234 Locations in genome: 51999714 51999708 51999691 51999687 51999675 51999655 51999624 51999614 51999571 Upstream nucleotide (in genome): a t t c c t a a c Upstream nucleotide summary: a: 3, c: 3, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): t g c g c g c c g Downstream nucleotide summary: a: 0, c: 4, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 1, ca: 0, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr20:51999499-51999804 (+) atctgtgaaactactttctcaccgggcacagtggctcacgcctgtaatcctaacactttgggaggccagggcaggtggatcacctgaggttcggaggtcgagaccagcctgggcaacatggtgaaaccccgtctctaataaaatacaaaagaaattagccgggggtggcggtgtgcacctgtagtcccagctactcgggaggctgaggtaggagaattgcctgaacctgggaggcagcggttgcagtgagccgagattgtgccactgcactcaagcctgggcaacaaagagaaactctgtctcaaa >AI888833:1-306 (-) atctgtgaaactactttctcaccgggcacagtggctcacgcctgtaatcctaacactttgggaggccagggcgggtggatcacctgaggttcggaggtcgagaccagcctgggcagcatggtgaagccccgtctctaataaaatacaaaagaaattggccgggggtggcggtgtgcgcctgtagtcccggctgctcgggaggctgaggtgggagagttgcctgaacctgggaggcagcggttgcagtgagccgagattgtgccactgcactcaagcctgggcaacaaagagaaactctgtctcaaa End editing Edited EST: DW422742, type: ag Aligns to: chr22:41811099-41811381 (+-) All mismatches: ag (47), ag (74), ag (75), ag (109), ag (129), ag (144), ag (152), ag (180), ag (209), Editing mismatches: 9, all mismatches: 9, alignment length: 283, cluster length: 163, total number of As: 32 Locations in RNA: 47 74 75 109 129 144 152 180 209 Locations in genome: 41811344 41811317 41811316 41811282 41811262 41811247 41811239 41811211 41811182 Upstream nucleotide (in genome): a a c c t t c t a Upstream nucleotide summary: a: 3, c: 3, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g g a t g a c g g Downstream nucleotide summary: a: 2, c: 1, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 3, at: 0, ca: 1, cc: 1, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 0 >chr22:41811099-41811381 (+) gaggacagagtcttgctctgtcacccaggctggagtgcagtggtgcgacctcggttcactgcaaccgccacctcccgggttcaagcgattctcctgcctcggcctctctagtagctgggactataggtatgtaccaccacacccggctaatttttgtatttttagtagacatggggttttgccatgttggccaggctggtctttaactcttgacctcaagtgatccacccgcctcagcctcccaaagtggtgggattacaggcgtgagccaccatacccggcc >DW422742:10-292 (-) gaggacagagtcttgctctgtcacccaggctggagtgcagtggtgcgacctcggttcactgcaaccgccacctcccgggttcaggcgattctcctgcctcggcctctctagtggctgggactataggtatgtaccaccacgcccggctgatttttgtatttttggtagacatggggttttgccgtgttggccaggctggtctttaactcttgacctcgggtgatccacccgcctcagcctcccaaggtggtgggattacaggcgtgagccaccatacccggcc End editing Edited EST: BU738719, type: ag Aligns to: chr22:50849219-50849481 (+-) All mismatches: ag (133), ag (193), ag (227), ag (276), ag (293), ag (294), ag (312), ag (328), ag (368), ag (369), Editing mismatches: 10, all mismatches: 10, alignment length: 263, cluster length: 237, total number of As: 42 Locations in RNA: 133 193 227 276 293 294 312 328 368 369 Locations in genome: 50849481 50849421 50849387 50849338 50849321 50849320 50849302 50849286 50849246 50849245 Upstream nucleotide (in genome): a c a c a c a a a a Upstream nucleotide summary: a: 7, c: 3, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): n t t g g a c t g a Downstream nucleotide summary: a: 2, c: 1, g: 3, t: 3, other: 1 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 2, ca: 1, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr22:50849219-50849481 (+) ttttgtttttgttttcgtttgagacaaagtctcccttttgtctcccaggctggagtgcaggggcacaatctcggctcactgcaacctccgccccctggttcaagtgattctcctgcctcagcctcccgcgtagccaggattacaggtgcctgcccccatgacccgctaatttttgtatttttagtagagatggggtttcaccatgttggcaaggcagtcttgaactcctgacctcaggtgatccaccggccttggcctcccaa >BU738719:133-395 (-) ttttgtttttgttttcgtttgagacagggtctcccttttgtctcccaggctggagtgcaggggcacagtctcggctcactgcagcctccgccccctggttcgggtgattctcctgcctcggcctcccgcgtagccaggattacaggtgcctgcccccatgacccgctagtttttgtatttttagtagagatggggtttcaccgtgttggcaaggcagtcttgaactcctgacctcaggtgatccaccggccttggcctcccag End editing Edited EST: AI373275, type: ag Aligns to: chr22:24970485-24970938 (+-) All mismatches: ag (219), ag (229), ag (264), ag (268), ag (277), ag (296), ag (300), ag (330), ag (363), ag (374), Editing mismatches: 10, all mismatches: 10, alignment length: 454, cluster length: 156, total number of As: 35 Locations in RNA: 219 229 264 268 277 296 300 330 363 374 Locations in genome: 24970720 24970710 24970675 24970671 24970662 24970643 24970639 24970609 24970576 24970565 Upstream nucleotide (in genome): a c t t c t t c c a Upstream nucleotide summary: a: 2, c: 4, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g t a g c g g g t t Downstream nucleotide summary: a: 1, c: 1, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 0, cc: 1, cg: 1, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 3, tt: 0, other: 0 >chr22:24970485-24970938 (+) catgttttcatgactattccttgatggttttttgtttgcttgttttaagacggtctcactcttccccaggcgggagtgcaatggcacaatcatggctcactgcagcctcaaccttctcgggctcaggtgattctcccacctcagcctcctgagtagctagaaatactggtgcacaccaccatgcctagctaatttttgtattttttgtagagacagggttttgccatgttgcccaagctggtcttgaactccggggctcaagtgatctgcccgcctcggcctgctgggattataggtgtgagccactgcacccggccaccattatcttttgaatcctctcttcctcctgcccaccatgaatttacttcctctcacccatctccctgatattgtaattctggttagatcatattcagtgtcaaattattaagatgtgattaaactttttaaaaat >AI373275:1-454 (-) catgttttcatgactattccttgatggttttttgtttgcttgttttaagacggtctcactcttccccaggcgggagtgcagtggcacaatcgtggctcactgcagcctcaaccttctcgggctcgggtgattctcccacctcagcctcctgagtggctggaaatactggtgcacaccgccatgcctggctgatttttgtattttttgtagagacagggttttgccgtgttgcccaggctggtcttgaactccggggctcaagtgatctgcccgcctcggcctgctgggattataggtgtgagccactgcacccggccaccattatcttttgaatcctctcttcctcctgcccaccatgaatttacttcctctcacccatctccctgatattgtaattctggttagatcatattcagtgtcaaattattaagatgtgattaaactttttaaaaat End editing Edited EST: CK816152, type: ag Aligns to: chr2:97461871-97462180 (+-) All mismatches: ag (35), ag (73), ag (132), ag (151), ag (155), ag (183), Editing mismatches: 6, all mismatches: 6, alignment length: 309, cluster length: 149, total number of As: 30 Locations in RNA: 35 73 132 151 155 183 Locations in genome: 97462159 97462121 97462062 97462043 97462039 97462011 Upstream nucleotide (in genome): c a t t c t Upstream nucleotide summary: a: 1, c: 2, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g t g g c g Downstream nucleotide summary: a: 0, c: 1, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 3, tt: 0, other: 0 >chr2:97461871-97462180 (+) tttttttttttttttttttttttttttttgagacagagtcttgctctgttgcccaggctggagtgcagtggcgtgatctcggctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagccttccgagtagctgggactacaggtgtgtactaccacacctagctgatttttgtatttttagtagagatggggttttaccgtgttggccaggctggtctcaaactcctggcctcaagcaatctgcccgcttcagcccgtccaaggtgctgggattacagatgtgagccattgctcccag >CK816152:15-323 (-) tttttttttttttttttttttttttttttgagacagagtcttgctctgttgcccaggctggagtgcagtggcgtgatctcggctcactgcaacctctgcctcccgggttcaagcaattctcctgcctcagccttccgagtggctgggactacaggtgtgtactaccacgcctggctgatttttgtatttttggtagagatggggttttaccgtgttggccaggctggtctcaaactcctggcctcaagcagtctgcccgcttcagcccgtccaaggtgctgggattacggatgtgagccat-gctcccag End editing Edited EST: DB300949, type: ag Aligns to: chr2:97921554-97922094 (+-) All mismatches: ag (80), ag (105), ag (112), ag (121), ag (178), ag (179), ag (180), ag (187), ag (193), ag (198), ga (537), Editing mismatches: 10, all mismatches: 11, alignment length: 541, cluster length: 119, total number of As: 37 Locations in RNA: 80 105 112 121 178 179 180 187 193 198 Locations in genome: 97922015 97921990 97921983 97921974 97921917 97921916 97921915 97921908 97921902 97921897 Upstream nucleotide (in genome): a a t a a a g a t c Upstream nucleotide summary: a: 6, c: 1, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): c g c t c a a g g g Downstream nucleotide summary: a: 2, c: 3, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 2, at: 1, ca: 0, cc: 0, cg: 1, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr2:97921554-97922094 (+) tgttgaagatttttgaatcagggttcgttactgacattggcctagtattttcgtctcttgtagtgtccttgtctgtctttggtatcggaatgatggtaccctaataaaatgagtttggaagtatttcctctatttcacttttttgaaagagtttgagagtaattagtattagttctttaaaggtttgtcagaatttagcagtgaagccttctggtcctatgcttttctttcatgggaggcttttaatttctgcttcaggccaggcttggtggctcacacctgtaatcctagcactttgggaggctgaggtgggtggattgcttgaggtctggagttcgagaccagcctagccaaagtagtgaaaccctgtctctactaaaaatacaaaaaatcagatgggtgtggtggtgggcgcctgtaatcccagctacttggaaggctgaggtaggagaattgcttgaacctgggaggcggaggctgcagttagctgagactgtgccattgcactctaccctgggcaacaaaagcaaaactccgcttc >DB300949:1-541 (-) tgttaaagatttttgaatcagggttcgttactgacattggcctagtattttcgtctcttgtagtgtccttgtctgtctttggtatcggaatgatggtaccctaataaaatgagtttggaagtatttcctctatttcacttttttgaaagagtttgagagtaattagtattagttctttaaaggtttgtcagaatttagcagtgaagccttctggtcctatgcttttctttcatgggaggcttttaatttctgcttcaggccaggcttggtggctcacacctgtaatcctagcactttgggaggctgaggtgggtggattgcttgaggtctggagttcgagaccggcctggccaaggtagtggggccctgtctctactaaaaatacaaaaaatcagatgggtgtggtggtgggcgcctgtagtcccagctgcttggagggctgaggtaggagaattgcttgagcctgggaggcggaggctgcagttagctgagactgtgccattgcactctaccctgggcaacaaaagcaaaactccgcttc End editing Edited EST: DW435609, type: ag Aligns to: chr2:10191089-10191335 (+-) All mismatches: ag (47), ag (49), ag (57), ag (73), ag (86), ag (102), ag (120), ag (124), ag (127), ag (144), Editing mismatches: 10, all mismatches: 10, alignment length: 247, cluster length: 98, total number of As: 19 Locations in RNA: 47 49 57 73 86 102 120 124 127 144 Locations in genome: 10191297 10191295 10191287 10191271 10191258 10191242 10191224 10191220 10191217 10191200 Upstream nucleotide (in genome): a c c c c t t t t a Upstream nucleotide summary: a: 2, c: 4, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g a g t t g c g g t Downstream nucleotide summary: a: 1, c: 1, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 1, cc: 0, cg: 1, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr2:10191089-10191335 (+) cgcgatctcggctcactgcaagctctgcctcccgggttcacgccattctcctctcctgcctcagcctcccgagtagctgggattacaggtgccagctaccatgcctggctaatttttttggtatttttagtagatacggggtttcaccatgttagtcaggatggtctccatctcctgacctcatgatccgtctgtctcagcctcccaaagtgctgggattacaggtgtgagccaccatgcccggccg >DW435609:9-255 (-) cgcgatctcggctcactgcaagctctgcctcccgggttcacgccattctcctctcctgcctcagcctcccgagtagctgggattacaggtgccagctaccatgcctggctagtttttttggtatttttggtggatgcggggtttcaccatgttggtcaggatggtctccgtctcctgacctcgtgatccgtctgtctcggcctcccgaggtgctgggattacaggtgtgagccaccatgcccggccg End editing Edited EST: BF906612, type: ag Aligns to: chr2:152280772-152281007 (+-) All mismatches: ag (142), ag (154), ag (155), ag (231), ag (234), Editing mismatches: 5, all mismatches: 5, alignment length: 235, cluster length: 93, total number of As: 20 Locations in RNA: 142 154 155 231 234 Locations in genome: 152280890 152280878 152280877 152280801 152280798 Upstream nucleotide (in genome): t a a t t Upstream nucleotide summary: a: 2, c: 0, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): t g a g g Downstream nucleotide summary: a: 1, c: 0, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 2, tt: 1, other: 0 >chr2:152280772-152281007 (+) tatgtccggctaatttttgtgtttttagtagagataggatttcaccatgttgaccaggatggtctcgatctcctgaccttgttatctgcccacctcggcctcccaaagtggtgggattataggcgtgagccaccgtgcctggaagcataaagtttttaagatttatccatgtcataacatatattaaagttggattcttatggctgagtaattgtatgtatataacacattttgtt >BF906612:26-260 (-) tatgtccggctaatttttgtgtttttggtggagataggatttcaccatgttgaccaggatggtctcgatctcctgaccttgttatctgcccacctcggcctcccagggtggtgggattgtaggcgtgagccaccgtgcctggaagcataaagtttttaagatttatccatgtcataacatatattaaagttggattcttatggctgagtaattgtatgtatataacacattt-gtt End editing Edited EST: AA358438, type: ag Aligns to: chr2:179459788-179460006 (+-) All mismatches: ag (129), ag (148), ag (159), ag (160), ag (161), ag (165), ag (185), ag (187), ag (188), ag (205), Editing mismatches: 10, all mismatches: 10, alignment length: 219, cluster length: 77, total number of As: 24 Locations in RNA: 129 148 159 160 161 165 185 187 188 205 Locations in genome: 179459878 179459859 179459848 179459847 179459846 179459842 179459822 179459820 179459819 179459802 Upstream nucleotide (in genome): a c a a a t a a c c Upstream nucleotide summary: a: 6, c: 3, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): t t t a a g c a a g Downstream nucleotide summary: a: 4, c: 1, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 0, at: 2, ca: 1, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr2:179459788-179460006 (+) aggagtttgagaccagcctggccaacatggcaaaaccctgcctctactagaaatagaaaaattagctgggcatggtggtgcatgtctgtaatcccagctactcgggagactgagacacaagaatcacttgaacctcagaggtggaggttgcagtgagccaagatcatgacactatactccagcctcggtaacagtaagactatgtgtcaaaacaaaacc >AA358438:1-219 (-) aggagtttgagaccggcctggccaacatggcggagccctgcctctactagaaatggaagggttagctggncgtggtggtgcatgtctgtagtcccagctactcgggagactgagacacaagaatcacttgaacctnagaggtggaggttgcagtgagccaagatcatgacactatactccagcctcggtaacagtaagactatgtgtcaaaacaaaacc End editing Edited EST: AA714116, type: ag Aligns to: chr2:152276996-152277251 (+-) All mismatches: ag (100), ag (103), ag (147), ag (151), ag (183), Editing mismatches: 5, all mismatches: 5, alignment length: 255, cluster length: 85, total number of As: 24 Locations in RNA: 100 103 147 151 183 Locations in genome: 152277152 152277149 152277104 152277100 152277068 Upstream nucleotide (in genome): t g t a t Upstream nucleotide summary: a: 1, c: 0, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): a c g a g Downstream nucleotide summary: a: 2, c: 1, g: 2, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 0 >chr2:152276996-152277251 (+) tagtcccaaagcgggaggctgaggtgggaggattgcttgaggccaggagttccagacccatctgggcaacatagtgaagacccatctctacaaaatatcttaaaaattagctgggcgtggtggcatgcgcctgtagtctcagatgcttgggagactaaggcgggagggttgcttgaccagaaatttgaggctgcagtgagctatgatctcaccactgcattctagcctgggtgacagaatgagaccctgtctcaaa >AA714116:1-255 (-) tagtcccaaagcgggaggctgaggtgggaggattgcttgaggccaggagttccagacccatctgggcaacatggtgaagacccatctctacaaaatatcttaaagattggctgggcgtggtg-catgcgcctgtagtctcagatgcttgggaggctgaggcgggagggttgcttgaccagaaatttgaggctgcagtgagctatgatctcaccactgcattctagcctgggtgacagaatgagaccctgtctcaaa End editing Edited EST: AI041499, type: ag Aligns to: chr2:54061341-54061687 (+-) All mismatches: ag (30), ag (52), ag (53), ag (69), ag (104), Editing mismatches: 5, all mismatches: 5, alignment length: 344, cluster length: 76, total number of As: 21 Locations in RNA: 30 52 53 69 104 Locations in genome: 54061658 54061635 54061634 54061618 54061583 Upstream nucleotide (in genome): g a c c a Upstream nucleotide summary: a: 2, c: 2, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): a g a c t Downstream nucleotide summary: a: 2, c: 1, g: 1, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 1, cc: 1, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr2:54061341-54061687 (+) atcaacagtgtgaaaaagacaacctatggaatggaagaaaatatttgtaaactatgtatctgataaggagttaatatccaaaatatataaggaattcacacacctcaatagcaagaaaaaattaaccagattttacaatgggcaaaggaactaaatagacatgtctcaaaagaaaacatacaaatggccaacaggtatataaaaaaaggtcagcatcggccgggcggtggcccacgcctgtaatcccaggactttgggaggccaagatgggtggatcacgaggtcaggagatcaagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaa >AI041499:1-344 (-) atcaacagtgtgaaaaagacaacctatggaatggaagaaaatatttgtaaactatgtatctgataaggagttaatatccaaaatatataaggaattcacacacctcaatagcaagaaaaaattaaccagattttacaatgggcaaaggaactaaatagacatgtctcaaaagaaaacatacaaatggccaacaggtatataaaaaaaggtcagcatcggccgg-cggtg-cccacgcctgtagtcccaggactttgggaggccaagatgggtggatcgcgaggtcaggagatcggg-ccatcctggctaacacggtggaaccccgtctctactaaaaatacaaaaaa End editing Edited EST: AI375930, type: ag Aligns to: chr2:204167451-204167576 (+-) All mismatches: ag (341), ag (350), ag (380), ag (381), ag (400), ag (429), Editing mismatches: 6, all mismatches: 6, alignment length: 126, cluster length: 89, total number of As: 15 Locations in RNA: 341 350 380 381 400 429 Locations in genome: 204167555 204167546 204167516 204167515 204167496 204167467 Upstream nucleotide (in genome): t a a c a a Upstream nucleotide summary: a: 4, c: 1, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): c c g a c t Downstream nucleotide summary: a: 1, c: 3, g: 1, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 1, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr2:204167451-204167576 (+) ctgtcaccaggctggaatgcagtggcgtgatctcggctcactgcaacctctgcctcccaggttcaagcgattctcttgcctcagccttttgagtaactggggttacaggcgcgtgccatcacaccc >AI375930:320-445 (-) ctgtcaccaggctggagtgcagtggcgtgatctcggctcactgcagcctctgcctcccaggttcgggcgattctcttgcctcagccttttgagtagctggggttgcaggcgcgtgccatcacaccc End editing Edited EST: AI863544, type: ag Aligns to: chr3:122867120-122867415 (+-) All mismatches: ag (91), ag (121), ag (123), ag (160), ag (180), ag (184), ag (204), ag (231), Editing mismatches: 8, all mismatches: 8, alignment length: 296, cluster length: 140, total number of As: 39 Locations in RNA: 91 121 123 160 180 184 204 231 Locations in genome: 122867325 122867295 122867293 122867256 122867237 122867233 122867213 122867186 Upstream nucleotide (in genome): g t t a g t c c Upstream nucleotide summary: a: 1, c: 2, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g g t a g g a g Downstream nucleotide summary: a: 2, c: 0, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 1, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 0, tg: 2, tt: 1, other: 0 >chr3:122867120-122867415 (+) aaaagttgaaactggccgggcacggtggctcatggctgtaatcctagcactttgggaagtagaggcaggaggatctcttgagttcaggagttcaagaccagcctgggcaacatagtgagacccc-acctctaccgaaaatcaaaaaaattacctgggcatggtggtgtgcgcctatagtcccagcactttgggaatctgaggtgggaggattgcttgaagccgggaggttgaggctacagtgagctgggatggtgccattgtactccagcctcagcaacagagtgagaccctgtctt >AI863544:1-296 (-) aaaagtt-aaactggccgggcacggtggctcatggctgtaatcctagcactttgggaagtagaggcgggaggatctcttgagttcaggagttcgagaccagcctgggcaacatggtgggacccccacctctaccgaagatcaaaaaaattacctgggcatggtggtgtgcgcctgtggtcccagcactttgggaatctgaggtggggggattgcttgaagccgggaggttgaggctacagtgagctgggatggtgccattgtactccagcctcagcaacagagtgagaccctgtctt End editing Edited EST: D44721, type: ag Aligns to: chr4:2841130-2841531 (+-) All mismatches: ag (92), ag (101), ag (108), ag (134), ag (136), ag (138), ag (144), ag (172), ag (180), ag (197), ag (212), tc (292), Editing mismatches: 11, all mismatches: 12, alignment length: 402, cluster length: 121, total number of As: 26 Locations in RNA: 92 101 108 134 136 138 144 172 180 197 212 Locations in genome: 2841440 2841431 2841424 2841398 2841396 2841394 2841388 2841360 2841352 2841335 2841320 Upstream nucleotide (in genome): c a t c a t t a t c a Upstream nucleotide summary: a: 4, c: 3, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): c c g g c a g t t c g Downstream nucleotide summary: a: 1, c: 4, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 1, ca: 0, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 2, tt: 1, other: 0 >chr4:2841130-2841531 (+) caagcgatctgctggcctcagcctcccaaagttgggattataggcgtgagctaccagattttttcttattaatctaataattctttgtatagtcttgatattatccataatgtgtattgcaaatatcttctctaactctggcttgactgtttatggtgtcctttttttttggggggggttttttgagacaaggtcttgctctgtcacccaggctggagtgttatggcacaatcttggcttattgcagcctcaattcctaggcttaaacagtcctcccacctcagcctcctgagtagccggaactacagtcacgcacttccatgtccagataattttttttttttttttagagataggatcttactatgccccagctggtctcaaactcctagactcaatgag >D44721:1-402 (-) caagcgatctgctggcctcagcctcccnaagttgggattataggcgtgagctaccagattttttcttattaatctaataantctttgtatagtcttgatattatccataacgtgtattgcaaatatcttctctaactctggcntgactgtttatggtgtcctttttttttggggggggttttttgagacagggtcttgctctgtcgcccaggctggagtgttgtggcacagtcttggcttattgcagcctcaattcctgggcttgagcggtcctcccacctcagcctcctgagtggccggagctacagtcgcgcacttccatgtccagataattttttttttttttttagagataggatcttactatgccccagctggtctcaaactcctagactcaatgag End editing Edited EST: DB350047, type: ag Aligns to: chr4:128976326-128976838 (+-) All mismatches: ga (2), ag (342), ag (366), ag (394), ag (395), ag (435), ag (436), ag (462), ag (494), ag (501), ag (502), Editing mismatches: 10, all mismatches: 11, alignment length: 513, cluster length: 161, total number of As: 44 Locations in RNA: 342 366 394 395 435 436 462 494 501 502 Locations in genome: 128976497 128976473 128976445 128976444 128976404 128976403 128976377 128976345 128976338 128976337 Upstream nucleotide (in genome): c c a g a t t t a c Upstream nucleotide summary: a: 3, c: 3, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): a g c a t a g a c a Downstream nucleotide summary: a: 5, c: 2, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 1, ca: 2, cc: 0, cg: 1, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 1, tt: 0, other: 0 >chr4:128976326-128976838 (+) ctagcctggccaacatggtaaaaccccaactctactaaaaatacaaaaattagccgggtgtggtggtgggtgcctgtaatcctagcatcttgggaggctgaggcaggaggatcacttgaacccgggaggtggaagttgtggtgagccaggaccgagccattcagcctgggcaacaagagggaaactccgcctcaaaaaaaaaaaaaaaaaaaaaaagacctgggaaagaaaggcattttcctttcgaaagaaagaaaatgttgaagttaagataaaagattacggagaccaagattatttttgaagccttatagtggctacgcttagagacaatagatgacaaatgtttcctattcagatctttaaaaggtgctacactcttagttaatctctttaggatttggagggcctggaagaaaatacctagctatgttaatatagattctttacagatgcaaatatccccccctacaaaggacagctttacagggccatttcaaaatatggcaaagg >DB350047:1-513 (-) ctagcctggccggcatggtgaaaccccaactntactaaaaatacaaaaattggccgggtgtggtggtgggtgcctgtggtcctagcatcttgggaggctgaggcaggaggatcacttgggcccgggaggtggaagttgtggtgagccgggaccgagccattcagcctgggcgacaagagggaaactccgcctcaaaaaaaaaaaaaaaaaaaaaaagacctgggaaagaaaggcattttcctttcgaaagaaagaaaatgttgaagttaagataaaagattacggagaccaagattatttttgaagccttatagtggctacgcttagagacaatagatgacaaatgtttcctattcagatctttaaaaggtgctacactcttagttaatctctttaggatttggagggcctggaagaaaatacctagctatgttaatatagattctttacagatgcaaatatccccccctacaaaggacagctttacagggccatttcaaaatatggcaaaag End editing Edited EST: DB299381, type: ag Aligns to: chr4:26761472-26762021 (+-) All mismatches: ag (8), ag (16), ag (21), ag (33), ag (39), ag (62), ag (66), ag (71), ag (92), ag (95), Editing mismatches: 10, all mismatches: 10, alignment length: 551, cluster length: 88, total number of As: 28 Locations in RNA: 8 16 21 33 39 62 66 71 92 95 Locations in genome: 26762014 26762006 26762001 26761989 26761983 26761960 26761956 26761951 26761930 26761927 Upstream nucleotide (in genome): c t c c c a c c a t Upstream nucleotide summary: a: 2, c: 6, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): t a t g a g g a t t Downstream nucleotide summary: a: 3, c: 0, g: 3, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 2, cc: 0, cg: 2, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 1, other: 0 >chr4:26761472-26762021 (+) tta-ccattgttaatgtacattcatgttgttttcagtttgggtgtattatggatacagctactataaacatttgtgcacaagccttcatgtggacatatatcttcatttatctggggtaaataccttaggagtaggatttctgggttatgtgtaagcacgtgtttaacttagaaggaggcctccaaactcttctgaagtggttctactgttttacgttgccaccaacagtatatgagttccagtgtttcccaatccttactaccaacacttggtgttgtcatattagtcattctaataagtggttataatttgtattttcctaatgatattgagcatattttcatacttatttgccatttatacatattcttttgtaaagtatctgttcaaatcttttgtccattttaaatcaatgatcttactaagttataggctaggtgtggtggctcacacctataatcccagcactttgggaggccaaggcaggaagatggcttgagcccaggagttcaacaccagcttgggcaacatggtaaaaccacatccctac >DB299381:1-551 (-) ttacccattgttaatgtacattcatgttgttttcagtttgggtgtattatggatacagctactataaacatttgtgcacaagcnttcatgtggacatatatcttcatttatctggggtaaataccttaggagtaggatttctgggttatgtgtaagcacgtgtttaacttagaaggaggcctccaaactcttctgaagtggttctactgttttacgttgccaccaacagtatatgagttccagtgtttcccaatccttactaccaacacttggtgttgtcatattagtcattctaataagtggttataatttgtattttcctaatgatattgagcatattttcatacttatttgccatttatacatattcttttgtaaagtatctgttcaaatcttttgtccattttaaatcaatgatcttactaagttataggctaggtgtggtggctcacacctgtagtcccagcactttgggaggccgaggcgggaggatggcttgagcccaggagttcgacaccggcttgggcaacgtggtgaaaccacgtccctac End editing Edited EST: DW408971, type: ag Aligns to: chr4:2882191-2882502 (+-) All mismatches: tc (14), ag (102), ag (107), ag (169), ag (179), ag (207), ag (228), ag (234), ag (239), ag (264), ag (272), Editing mismatches: 10, all mismatches: 11, alignment length: 312, cluster length: 171, total number of As: 31 Locations in RNA: 102 107 169 179 207 228 234 239 264 272 Locations in genome: 2882409 2882404 2882342 2882332 2882304 2882283 2882277 2882272 2882247 2882239 Upstream nucleotide (in genome): t c t t c a c c a t Upstream nucleotide summary: a: 2, c: 4, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g t c g c g c g g t Downstream nucleotide summary: a: 0, c: 3, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 0, cc: 2, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 1, other: 0 >chr4:2882191-2882502 (+) ttttttttttttttttttttttttttttttgagacggagtctcgctctatctcccaagctggagtgcagtggcgggatctcagctcactgcaagctccgcctcccgggttcacaccattgtcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccacgcctggcttattttttgtatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgcctggccg >DW408971:9-320 (-) ttttttttttttttttttttttttttttttgagacggagtctcgctctgtctcccaggctggagtgcagtggcgggatctcggctcgctgcaggctccgcctcccgggttcacgccattgtcctgcctcagcctcccgagtggctgggactgcaggcgcccaccaccacgcctggcttattttttgtatttttagtagagacggggtttcaccgtgttggccaggatggtctcgatctcctgacctcgtgatccgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccaccatgcccggccg End editing Edited EST: AA927019, type: ag Aligns to: chr4:2841627-2841911 (+-) All mismatches: ag (67), ag (71), ag (75), ag (81), ag (107), ag (111), Editing mismatches: 6, all mismatches: 6, alignment length: 285, cluster length: 45, total number of As: 9 Locations in RNA: 67 71 75 81 107 111 Locations in genome: 2841845 2841841 2841837 2841831 2841805 2841801 Upstream nucleotide (in genome): c t c t t a Upstream nucleotide summary: a: 1, c: 2, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g c g g g a Downstream nucleotide summary: a: 1, c: 1, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr4:2841627-2841911 (+) ttcattttggttagtgctttttgtggcttaagaaattctttccaggctgggtacagtggctcacacctgtaatgccagcactttgggggcagaggcaggaggattacttgagctcaggagtttgagaccaacctggacaacatggcgaaacaccatctctacaaaaaatacaaaaattagctggacatggtggtgcgtgcctgtagtcccagctactcaggtggctggggtgagaggattgcttgagcccagaaggtcaaggctgcagtgagctgtgattgtgcc >AA927019:1-285 (-) ttcattttggttagtgctttttgtggcttaagaaattctttccaggctgggtacagtggctcacacctgtaatgccagcactttgggggcagaggcaggaggattacttgagctcaggagtttgagaccaacctggacaacatggcgaaacaccatctctacaaaaaatacaaagattggctggacatggtggtgcgtgcctgtggtcccggctgctcgggtggctggggtgagaggattgcttgagcccagaaggtcaaggctgcagtgagctgtgattgtgcc End editing Edited EST: DW427735, type: ag Aligns to: chr5:25468370-25468638 (+-) All mismatches: ag (102), ag (127), ag (178), ag (181), ag (182), ag (221), ag (228), ag (244), Editing mismatches: 8, all mismatches: 8, alignment length: 269, cluster length: 143, total number of As: 26 Locations in RNA: 102 127 178 181 182 221 228 244 Locations in genome: 25468546 25468521 25468470 25468467 25468466 25468427 25468420 25468404 Upstream nucleotide (in genome): t t t a c c c c Upstream nucleotide summary: a: 1, c: 4, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g g g g a c a a Downstream nucleotide summary: a: 3, c: 1, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 3, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 3, tt: 0, other: 0 >chr5:25468370-25468638 (+) tctctctgtcgcccaggctggagtgcagtggcacaatctcggctcactgcaagctccacctcccgggttcacgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccaccaccacgcccggctattttttgtatttttagtagagacggggtttcacggcgttagtcaggatgggctcgatctcctgacctcgtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacgcccggcc >DW427735:10-278 (-) tctctctgtcgcccaggctggagtgcagtggcacgatctcggctcactgcgagctccgcctcccgggttcacgccattctcctgcctcagcctcccgggtggctgggactacaggcgcccaccaccacgcccggctattttttgtatttttggtagagacggggtttcacggcgttggtcaggatgggctcgatctcctgacctcgtgatccgcctgcctcggcctcccaaagtgctgggattacaggcgtgagccaccacgcccggcc End editing Edited EST: CA445713, type: ag Aligns to: chr6:81064391-81065134 (+-) All mismatches: ag (39), ag (76), ag (86), ag (121), ag (138), ag (139), ag (165), ag (177), ag (180), Editing mismatches: 9, all mismatches: 9, alignment length: 746, cluster length: 142, total number of As: 40 Locations in RNA: 39 76 86 121 138 139 165 177 180 Locations in genome: 81065096 81065059 81065049 81065014 81064997 81064996 81064970 81064958 81064955 Upstream nucleotide (in genome): c a c a a t t a t Upstream nucleotide summary: a: 4, c: 2, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): a t g g t a a a a Downstream nucleotide summary: a: 5, c: 0, g: 2, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 2, ca: 1, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 3, tc: 0, tg: 0, tt: 0, other: 0 >chr6:81064391-81065134 (+) gagttgatttttgtatacagtgataggagttcagttccattcttttgcatatagtgaatctattttctcag-caccatttat--ggaaaagggtgtcctttgtgtatgtttttattggctttgtcaaagatcagttagctgtaaatatgtgatcttatgtctgtgttatctattctgttccattaatctatgtgtctggttttataccagtactgtgctcttttgattactatagccttatagtataatttgaaatcaagcaatgtgatgcctccagctttgttcttttgcttaggactgctttggttatttggactcttttttgttccatatgagttttagaattgttttttctaattccgtgaaaaatgatgttggtatcttgatagggatttcattgaatctgtagattgttttgagcagtatgattatgttaatgatattagttattccaattcatgggatgtttttccatttgtttgtgtcatctacaattaggtaggcagatcacctgaggtcgggagttcgagactagcctggccaacatggtgaaaccccatctgtactaaaaacacaaaaattaactgggcatggtggtacacgcctgtaatcccagctacttgtgaagctgaggtgggagaatctcttgaacccgggaggcagaggttgcaatgagccgagatcgtgccactgcactccagcctgggcaacagattgagactctgtctcaaaaaaaaaaaaaaaaaa >CA445713:1-746 (-) gagttga-ttntgtatacagtgataggagttcagttccattcttntgcatatagtgaatctattttctcagccaccatttatggggaaaagggtgtcctttgtgtatgtttttattggctttgtcaaagatcagttagctgtaaatatgtgatcttatgtctgtgttatctattctgttccattaatctatgtgtctggttttataccagtactgtgctcttttgattactatagccttatagtataatttgaaatcaagcaatgtgatgcctccagctttgttcttttgcttaggactgctttggttatttggactcttttttgttccatatgagttttagaattgttttttctaattccgtgaaaaatgatgttggtatcttgatagggatttcattgaatctgtagattgttttgagcagtatgattatgttaatgatattagttattccaattcatgggatgtttttccatttgtttgtgtcatctacaattaggtaggcagatcacctgaggtcgggagttcgagactagcctggccaacatggtgaaaccccatctgtactgaagacacaaaaattgactgggcatggtggtacacgcctgtggtcccagctacttgtgaggctgaggtgggagaatctcttgaacccgggaggcggaggttgcagtgagccgagatcgtgccactgcactccagcctgggcgacagattgagactctgtctcaaaaaaaaaaaaaaaaaa End editing Edited EST: BF477301, type: ag Aligns to: chr6:42756096-42756357 (+-) All mismatches: ag (226), ag (230), ag (250), ag (275), ag (283), ag (293), ag (299), Editing mismatches: 7, all mismatches: 7, alignment length: 262, cluster length: 74, total number of As: 22 Locations in RNA: 226 230 250 275 283 293 299 Locations in genome: 42756169 42756165 42756145 42756120 42756112 42756102 42756096 Upstream nucleotide (in genome): c t t c c t n Upstream nucleotide summary: a: 0, c: 3, g: 0, t: 3, other: 1 Downstream nucleotide (in genome): g g g c c c g Downstream nucleotide summary: a: 0, c: 3, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 1 >chr6:42756096-42756357 (+) agaattacaggtatgcaccaccacacccagctaattttgtatttttagtagagacgggtccaccatgttagccaggctggtctcgaactcctgacctcaggtgatccacgcacctaggcctcccaaaatgttgggattataggtgtgagccaccatgcctggccgggagcagcattcttaaggaattcaagacacaggaagaacacttgcctttagtgggagcaagacaacgcagtgtggcagaagacaaagaatgggggca >BF477301:38-299 (-) ggaattgcaggtatgcgccaccacgcccagctaattttgtatttttagtggagacgggtccaccatgttggccgggctggtctcgaactcctgacctcaggtgatccacgcacctaggcctcccaaaatgttgggattataggtgtgagccaccatgcctggccgggagcagcattcttaaggaattcaagacacaggaagaacacttgcctttagtgggagcaagacaacgcagtgtggcagaagacaaagaatgggggca End editing Edited EST: AA045886, type: ag Aligns to: chr6:43555460-43555770 (+-) All mismatches: ag (16), ag (25), ag (50), ag (104), ag (117), ag (126), ag (127), ag (182), ag (183), ag (184), ag (193), Editing mismatches: 11, all mismatches: 11, alignment length: 312, cluster length: 178, total number of As: 48 Locations in RNA: 16 25 50 104 117 126 127 182 183 184 193 Locations in genome: 43555754 43555745 43555720 43555666 43555653 43555644 43555643 43555588 43555587 43555586 43555577 Upstream nucleotide (in genome): g t g g t a t a a g c Upstream nucleotide summary: a: 3, c: 1, g: 4, t: 3, other: 0 Downstream nucleotide (in genome): g g g g c t a c a a g Downstream nucleotide summary: a: 3, c: 2, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 1, ca: 0, cc: 0, cg: 1, ct: 0, ga: 1, gc: 0, gg: 3, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr6:43555460-43555770 (+) ttagtgttatc-aatagaaggcagagacctggcgcggtgattcacgcttctaatcccagcactttgggaggccgaggtgggtggatcatgaggtcaggagttcaagacc-aacctggccagcatggtgaaaccccatctctactaaaaatacaaaaattagctgggcatggtggcgcgtgcctgtaatcccagctacttgggaggctgaggcaggagatttgcttgaaccaggacccaggaggtggagattgaggtgagccgagatctcgccactgcactccagcctaggctacagagggagactccgtctca >AA045886:1-312 (-) ttagngttancaaataganggcagagacctggcgcggtgattcacgcttctaatcccagcactttgggaggccgaggtgggtggatcatgaggtcaggagttcaagacctaacctggccggcatggtggggccccatctctactaaaaatacaaaaattagctgggcatggtggcgcgtgcctgtggtcccagctgcttgggaggctggggcaggagatttgcttgaaccaggacccaggaggtggagattgaggtgagccgggatctcgccactgcactccagcctgggctacagggggag-ctccgtctca End editing Edited EST: AV760082, type: ag Aligns to: chr6:35283634-35283938 (+-) All mismatches: ag (19), ag (54), ag (71), ag (72), ag (84), ag (146), ag (164), ag (179), ag (243), ag (268), Editing mismatches: 10, all mismatches: 10, alignment length: 306, cluster length: 249, total number of As: 50 Locations in RNA: 19 54 71 72 84 146 164 179 243 268 Locations in genome: 35283920 35283885 35283868 35283867 35283855 35283794 35283776 35283761 35283697 35283672 Upstream nucleotide (in genome): t g a a c c t c c t Upstream nucleotide summary: a: 2, c: 4, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): c t c a g c c a c t Downstream nucleotide summary: a: 2, c: 5, g: 1, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 0, ca: 1, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 2, tg: 0, tt: 1, other: 0 >chr6:35283634-35283938 (+) tttttttttttttgaggaggaggaggagtcttgcttttatcgcccaggctggagtgcaatggcacgatctcagctcactgcaacctccgcctcccgagttcaagtgattctcctgcctcagcctcccaagttagctgggattacaggcacctgccaccacacctggctaa-ttttttttttttttgtatttttagtagagacagcatttcaccgtgttggccaggctggtctcaaactcctgacctcagatgatctgcccacctcggcctcccaaagtgctgggattacaggtataagccactgtg >AV760082:1-306 (-) tttttttttttttgaggaggaggaggagtcttgcttttgtcgcccaggctggagtgcaatggcgcgatctcagctcactgcaacctccgcctcccgagttcaagtgattctcctgcctcagcctcccgagttagctgggattgcaggcacctgccaccacgcctggctaatttttttttttttttgtatttttagtagagacagcatttcaccgtgttggccgggctggtctcaggctcctgacctcagatggtctgcccacctcggcctcccaaagtgctgggattgcaggtataagccactgtg End editing Edited EST: F03784, type: ag Aligns to: chr7:158719836-158720099 (+-) All mismatches: ag (105), ag (120), ag (127), ag (159), ag (166), ag (172), ag (185), ag (189), Editing mismatches: 8, all mismatches: 8, alignment length: 264, cluster length: 85, total number of As: 25 Locations in RNA: 105 120 127 159 166 172 185 189 Locations in genome: 158719995 158719980 158719973 158719941 158719934 158719928 158719915 158719911 Upstream nucleotide (in genome): t a t a a t a t Upstream nucleotide summary: a: 4, c: 0, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a c g a a c g g Downstream nucleotide summary: a: 3, c: 2, g: 3, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr7:158719836-158720099 (+) gagcctcagcacgttgggaggctgaggaaggaggattgcttgagcccaggagttccagaccagcctggacaacatagcaagaccccgtctctacaaaaaaattcaaaaattggctgggcgtggtggcacacacctgtagtcccaactgcttgggaggctaaggtgggaggattgcttgagcctaggagtttgaggctgcagtgagccgtgatcatgccactacactccagcctgggtgatggaatgagaccttgtctctctgtt >F03784:1-264 (-) gagcctcagcacgttgggaggctgaggaaggaggattgcttgagcccaggagttccagaccagcctggacaacatggcaggaccccgtctctgcaaaagaattcagaaattggctgggcgtggtggcacacacctgtggtcccagctgcttgggaggctgaggtgggaggattgcttgagcctaggagtttgaggctgcagtgagccgtgatcatgccactacactccagcctgggtgatggaatgagaccttgtctctctgtt End editing Edited EST: DB330092, type: ag Aligns to: chr7:66181104-66181622 (+-) All mismatches: ga (80), ag (86), ag (94), ag (114), ag (142), ag (156), ag (178), ag (182), ag (201), ag (261), ag (264), Editing mismatches: 10, all mismatches: 11, alignment length: 519, cluster length: 179, total number of As: 49 Locations in RNA: 86 94 114 142 156 178 182 201 261 264 Locations in genome: 66181537 66181529 66181509 66181481 66181467 66181445 66181441 66181422 66181362 66181359 Upstream nucleotide (in genome): c c a c t t t t c a Upstream nucleotide summary: a: 2, c: 4, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a g c g g g g c g g Downstream nucleotide summary: a: 1, c: 2, g: 7, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 1, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr7:66181104-66181622 (+) agatgtgtacacattttaaatggtgttgggtctttaccattatgtaatgtccctcttaatctattgtaaatttccttgctttgaggtatagtttgtcttatgtaaatataatcagttcagttttcctttgaccagcatttacgtaacatatctttttccatttttaaacttataatctacctatattaaaatatatagtcaggccaggtgcagcggctcatgcgtgtaatcccagcactttgggaggccgaggcaagcagatcacttgaggccaggagtttgagaccagcctgggcaacgtgacgaaaacctgtctctaccaaaaatgcaaaaaattagctaggtgtggcggcatgtgcctgtagtcctagctactcaggaggctgaggcatgaggatcgcttgaacctgggaggcagaggttgcagtgagccaagatggcaccactgcactccaggctgagtgaaagagcaagactctgtctcagaataaataaataaataaataaaacagcagcaac >DB330092:1-519 (-) agatgtgtacacattttaaatggtgttgggtctttaccattatgtaatgtccctcttaatctattgtaaatttccttgctttgaggtatagtttgtcttatgtaaatataatcagttcagttttcctttgaccagcatttacgtaacatatctttttccatttttaaacttataatctacctatattaaaatatatagtcaggccaggtgcagcggctcatgcgtgtaatcccagcactttgggaggccgaggcaggcggatcacttgaggccaggagtttgagaccagcctgggcaacgtgacgaaaacctgtctctgccaaaaatgcaaaaaattggctgggtgtggcggcatgtgcctgtggtcctagctactcgggaggctgaggcatgaggatcgcttgagcctgggaggcagaggttgcggtgagccgagatgacaccactgcactccaggctgagtgaaagagcaagactctgtctcagaataaataaataaataaataaaacagcagcaac End editing Edited EST: DW421947, type: ag Aligns to: chr7:66170902-66171188 (+-) All mismatches: ag (47), ag (73), ag (102), ag (169), ag (179), ag (228), Editing mismatches: 6, all mismatches: 6, alignment length: 287, cluster length: 182, total number of As: 29 Locations in RNA: 47 73 102 169 179 228 Locations in genome: 66171151 66171125 66171096 66171029 66171019 66170970 Upstream nucleotide (in genome): a c t t t a Upstream nucleotide summary: a: 2, c: 1, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g t g c g g Downstream nucleotide summary: a: 0, c: 1, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr7:66170902-66171188 (+) agacggagtctcgctttgtcgcccaggccggactgcgggctgcagtggcgcaatctcggctcactgcaagctccgcttcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccgccaccgcgcccggctaattttttgtatttttagtagagacggggtttcaccttgttagccaggatggtctcgatctcctgacctcatgatccacccgcctcggcctcgcaaagtcctgggattatagacatgagccaccgtgcccggcc >DW421947:10-296 (-) agacggagtctcgctttgtcgcccaggccggactgcgggctgcagtggcgcaatctcggctcactgcaggctccgcttcccgggttcacgccattctcctgcctcagcctcccgagtggctgggactgcaggcgcccgccaccgcgcccggctaattttttgtatttttagtagagacggggtttcaccttgttggccaggatggtctcgatctcctgacctcgtgatccacccgcctcggcctcgcaaggtcctgggattatagacatgagccaccgtgcccggcc End editing Edited EST: DW432037, type: ag Aligns to: chr7:4724895-4725152 (+-) All mismatches: ag (55), ag (65), ag (105), ag (110), ag (118), ag (132), ag (135), ag (141), ag (177), ag (199), ag (217), gt (249), Editing mismatches: 11, all mismatches: 12, alignment length: 258, cluster length: 163, total number of As: 34 Locations in RNA: 55 65 105 110 118 132 135 141 177 199 217 Locations in genome: 4725107 4725097 4725057 4725052 4725044 4725030 4725027 4725021 4724985 4724963 4724945 Upstream nucleotide (in genome): a t a t c t t t t c c Upstream nucleotide summary: a: 2, c: 3, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): g g g g c g g t c g a Downstream nucleotide summary: a: 1, c: 2, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 1, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 4, tt: 1, other: 0 >chr7:4724895-4725152 (+) tgtccagactggagtgcagtggctcactgcaaactctacctcccgggttcaagagattctcctgcctcagcctcctgagtggctgggactacaggcgcacaacaccacgcccagctaattctttgtatttttagtagagatggggtttcaccgtgttagccaagatggtctcgatctcctgacctcgtgatctgcctgccttagcttcccaaagtgctgggattacaggcatacaggcgtgagcccctgcgcccggcc >DW432037:10-267 (-) tgtccagactggagtgcattggctcactgcaaactctacctcccgggttcgagagattctcctgcctcggcctcctgagtggctgggactgcaggcgcacaacaccacgcccagctaattctttgtgtttttggtggagatggggtttcgccgtgttggccaggatggtctcgatctcctgacctcgtgatctgcctgccttggcttcccaaggtgctgggattacaggcatacaggcgtgagcccctgcgcccggcc End editing Edited EST: CA311993, type: ag Aligns to: chr7:2492570-2492972 (+-) All mismatches: ag (313), ag (325), ag (326), ag (380), ag (391), ag (394), ag (418), Editing mismatches: 7, all mismatches: 7, alignment length: 402, cluster length: 107, total number of As: 16 Locations in RNA: 313 325 326 380 391 394 418 Locations in genome: 2492677 2492665 2492664 2492610 2492599 2492596 2492571 Upstream nucleotide (in genome): t a a t a t g Upstream nucleotide summary: a: 3, c: 0, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): c g a c a g c Downstream nucleotide summary: a: 2, c: 3, g: 2, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 2, tg: 1, tt: 0, other: 0 >chr7:2492570-2492972 (+) gactttttttttttttttttttttgtagaaatggggttttactgtgttgtccaggctggtcttagggttgaattcctcctgcctcagcctcccaaagtgctgggattacaggcatgagccgccacacctggccgggattgtgctgaatatgtagatcaattcgaggagcactgcccatccatccttgaacatgggccccgtctccatttacttaagcctcttttaatttgtctcaacaatattttgtctttttcagcatataagccttgcactttttttgttacatttattcctaagtattttgttattctttatgctattgtgaatgaaattgttctcttatttctattttcagaatgtttgttgccagtatatataaaataaaacactatttatttattta >CA311993:18-419 (-) ggc-ttttttttttttttttttttgtggagatggggttttgctgtgttgtccaggctggtcttagggttgaattcctcctgcctcagcctcccagggtgctgggattgcaggcatgagccgccacacctggccgggattgtgctgaatatgtagatcaattcgaggagcactgcccatccatccttgaacatgggccccgtctccatttacttaagcctcttttaatttgtctcaacaatattttgtctttttcagcatataagccttgcactttttttgttacatttattcctaagtattttgttattctttatgctattgtgaatgaaattgttctcttatttctattttcagaatgtttgttgccagtatatataaaataaaacactatttatttattta End editing Edited EST: BF475392, type: ag Aligns to: chr7:120796538-120796856 (+-) All mismatches: ag (264), ag (274), ag (276), ag (300), ag (303), ag (311), ag (314), ag (321), Editing mismatches: 8, all mismatches: 8, alignment length: 319, cluster length: 58, total number of As: 27 Locations in RNA: 264 274 276 300 303 311 314 321 Locations in genome: 120796597 120796587 120796585 120796561 120796558 120796550 120796547 120796540 Upstream nucleotide (in genome): a c t a c t t a Upstream nucleotide summary: a: 3, c: 2, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): t g c a t t t t Downstream nucleotide summary: a: 1, c: 1, g: 1, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 2, other: 0 >chr7:120796538-120796856 (+) caatggaatattattcagccataaaaaagaatgaaatcatgtaatttacagcagcatgaatggaactggaggccattatattaagtgaaataagccaggcacagaaagacaaatgttgcatgttcacgttcatatatgtgagctaaaaaaatacatctcatgaagattgagaatagagtgatggttaccagaagccagaaatgatagaaggaggatggaaggaaaaaagaatatagctatacttattaccactgaactgtatgcttaagaataataaagacagtaaattttatatgcatattttgtctaaataaaaaaa >BF475392:5-323 (-) cagtggaatgttgttcagccgtagaaaagaatgaaatcatgtaatttgcggcagcatgagtggaactggaggccattatattaagtgaaataagccaggcacagaaagacaaatgttgcatgttcacgttcatatatgtgagctaaaaaaatacatctcatgaagattgagaatagagtgatggttaccagaagccagaaatgatagaaggaggatggaaggaaaaaagaatatagctatacttattaccactgaactgtatgcttaagaataataaagacagtaaattttatatgcatattttgtctaaataaaaaaa End editing Edited EST: BF673477, type: ag Aligns to: chr7:99165511-99165682 (+-) All mismatches: ag (89), ag (112), ag (148), ag (151), ag (154), ag (155), ag (157), ag (166), Editing mismatches: 8, all mismatches: 8, alignment length: 172, cluster length: 78, total number of As: 25 Locations in RNA: 89 112 148 151 154 155 157 166 Locations in genome: 99165594 99165571 99165535 99165532 99165529 99165528 99165526 99165517 Upstream nucleotide (in genome): a t t a a c t t Upstream nucleotide summary: a: 3, c: 1, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t c g t a a c c Downstream nucleotide summary: a: 2, c: 3, g: 1, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 2, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 3, tg: 1, tt: 0, other: 0 >chr7:99165511-99165682 (+) gtctctactaaaaatacaaaaattagctgggcatggtggtacatgcctgtgattgcagctacccaggaggctgaggctggagaatcgcttgaacccgggaggtggaggttgcagtgagccaagatcatgccattgcactccagcctgggcgacagagcgagactccataccc >BF673477:1-172 (-) gtctctgctaaaaatgcggaagttggctgggcatggtggtacatgcctgtgattgcagctgcccaggaggctgaggctggagagtcgcttgaacccgggaggtggaggttgcagtgagccaagatcatgccattgcactccagcctgggcgacagagcgagactccataccc End editing Edited EST: AI701680, type: ag Aligns to: chr7:99545559-99545809 (+-) All mismatches: ag (39), ag (44), ag (55), ag (96), ag (109), ag (123), ag (166), ag (231), ag (235), ag (236), ag (240), Editing mismatches: 11, all mismatches: 11, alignment length: 252, cluster length: 201, total number of As: 55 Locations in RNA: 39 44 55 96 109 123 166 231 235 236 240 Locations in genome: 99545771 99545766 99545755 99545714 99545701 99545687 99545644 99545580 99545576 99545575 99545571 Upstream nucleotide (in genome): c c t c t c t c a c a Upstream nucleotide summary: a: 2, c: 6, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): c c t g g g c g g a g Downstream nucleotide summary: a: 1, c: 3, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 1, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 1, other: 0 >chr7:99545559-99545809 (+) agtgctttgagaagccaaggcaggaggatgcttgaggccaggagttccagaccgga-ctgggcaaaagagcaagattcccacctctacaaaaatttaaaaattagctgggcatggtggtgtgcacctgcagtccctgctgcttaggaggctgaggcaggaagatcgcttgagcccaggagtgagactgcagtgagctatgatggcaccactgcactccagcctgagtgacagagcgagaccctaactcaaaa >AI701680:1-252 (-) agtgctttgagaggccggggcgggaggatgcttgaggccaggagttccagaccgganctgggcaaaagagcaagattcccacctctgcaaaaatttaaaaattagctgggcatggtggtgtgcacctgcggtccctgctgcttgggaggctgaggcgggaagatcgcttgagcccaggagtgagactgcagtgagctgtgatggcaccgctgcgctccagcctgagtgacagagcgagaccctaactcaaaa End editing Edited EST: N70222, type: ag Aligns to: chr8:56798820-56799178 (+-) All mismatches: ag (223), ag (251), ag (264), ag (282), ag (288), Editing mismatches: 5, all mismatches: 5, alignment length: 362, cluster length: 65, total number of As: 15 Locations in RNA: 223 251 264 282 288 Locations in genome: 56798956 56798928 56798916 56798898 56798892 Upstream nucleotide (in genome): c t c c c Upstream nucleotide summary: a: 0, c: 4, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): c g g a g Downstream nucleotide summary: a: 1, c: 1, g: 3, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr8:56798820-56799178 (+) gatggagtctcgctctgtcgccc-aggctgtagtacaatggtgcaatctccac-tcactgcaacccctcctcccaggttcaagcgattctgctgcctcagcc-tcccgagtagctgggattacaggcatgcaccaatgcaccaccatgcccggctaatttttgtatttttagtagagacagggtttcatcatgttggccagcctggtctcgaacacctgacctcaggtgatctgcctgcctcggcctcccaaagtgctgggattacaggcatgagccacgcgcccagcctgtcaaacttatttgaccacaacccatagcaagaaacattttaccttgtgctcaaatacacatatctgtaggc >N70222:1-362 (-) gatggagtctcgctctgtcgcccaaggctgtagtacaatggtgcaatctccacttcactgcaacccctnctcccgggttcgagcgattctgctgcctcggccttcccgagtggctgggattacaggcatgcaccaatgcgccaccatgcccggctaatttttgtatttttagtagagacagggtttcatcatgttggccagcctggtctcgaacacctgacctcaggtgatctgcctgcctcggcctcccaaagtgctgggattacaggcatgagccacgcgcccagcctgtcaaacttatttgaccacaacccatagcaagaaacattttaccttgtgctcaaatacacatatctgtaggc End editing Edited EST: DW420736, type: ag Aligns to: chr8:28033342-28033633 (+-) All mismatches: ag (87), ag (95), ag (99), ag (112), ag (146), ag (172), ag (194), ag (212), gc (220), ag (232), ag (237), Editing mismatches: 10, all mismatches: 11, alignment length: 290, cluster length: 151, total number of As: 28 Locations in RNA: 87 95 99 112 146 172 194 212 232 237 Locations in genome: 28033556 28033548 28033544 28033531 28033497 28033471 28033449 28033431 28033411 28033406 Upstream nucleotide (in genome): a t a c t t c c c c Upstream nucleotide summary: a: 2, c: 5, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): c g g c a c g a a c Downstream nucleotide summary: a: 3, c: 4, g: 3, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 2, cc: 2, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr8:28033342-28033633 (+) tttttttggggagtcagtcttgctctgttacccaagctggagtacagtggcatgatctcggctcactgcaacctccgcctcgcggtttcaagctattctcctgcctcagcctccctagtagctgggattacaggcatgtgccaccaggcctggctaatttttttgtatttttattagagacggggtttcaccttgttggccaagctagtctcgaactcctgacctcaagtgatccacctgccttggcctcccaaagtgctaggattacaggcatgagccactgcacccggcc >DW420736:10-299 (-) ttttttt--ggagtcagtcttgctctgttacccaagctggagtacagtggcatgatctcggctcgctgcgacctccgcctcccggtttcgagctattctcctgcctcggcctccctagtagctgggattgcaggcatgtgccaccaggcctggctgatttttttgtatttttattagagacggggtttcgccttgttggccaggctggtctcgagctcctgacctcaagtgatccacctgccttggcctcccaaagtgctaggattacaggcatgagccactgcacccggcc End editing Edited EST: GD156446, type: ga Aligns to: chr9:19376253-19376388 (+-) All mismatches: ga (886), ga (896), ga (902), ga (908), ga (962), Editing mismatches: 5, all mismatches: 5, alignment length: 136, cluster length: 77, total number of Gs: 14 Locations in RNA: 886 896 902 908 962 Locations in genome: 19376332 19376322 19376316 19376310 19376256 Upstream nucleotide (in genome): a a a a a Upstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a Downstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 5, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr9:19376253-19376388 (+) tcagagtctgatcttatttatttgttactcaaaaaatcttatttctgactggattcagacttagaagtagaagctcgcagagaggaaagtctgcgtctcttcgcaatttgttcctggcgcttctccttagcctcct >GD156446:830-965 (-) tcaaagtctgatcttatttatttgttactcaaaaaatcttatttctgactggattcaaacttaaaagtaaaagctcgcaaagaggaaagtctgcgtctcttcgcaatttgttcctggcgcttctccttagcctcct End editing Edited EST: AV700427, type: ag Aligns to: chr9:37129969-37130213 (+-) All mismatches: ag (54), ag (72), ag (77), ag (98), ag (109), Editing mismatches: 5, all mismatches: 5, alignment length: 245, cluster length: 56, total number of As: 15 Locations in RNA: 54 72 77 98 109 Locations in genome: 37130160 37130142 37130137 37130116 37130105 Upstream nucleotide (in genome): c c t a c Upstream nucleotide summary: a: 1, c: 3, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): g g a t g Downstream nucleotide summary: a: 1, c: 0, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr9:37129969-37130213 (+) ctcacgcctgtaatcccaacactttgagaggccgaggcgggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggcgaaaccccatctctactaaaaataaataaattagctgggagtggtggcaggcacctgtaatcccagctacttgggaggctaaggcaggagaattgcttgacccaggaggtggaggttgcagtgagctgagattgcaccattgcactccagcctgggt >AV700427:1-245 (-) ctcacgcctgtaatcccaacactttgagaggccgaggcgggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggcgaaaccccatctctactaaaaataaataaattagctgggagtggtggcgggcacctgtagtcccagctacttgggaggctgaggcgggagaattgcttgacccgggaggtggaggttgcagtgagctgagattgcaccattgcactccagcctgggt End editing Edited EST: AV699830, type: ag Aligns to: chr9:37129969-37130214 (+-) All mismatches: ag (55), ag (73), ag (78), ag (99), ag (110), Editing mismatches: 5, all mismatches: 5, alignment length: 246, cluster length: 56, total number of As: 15 Locations in RNA: 55 73 78 99 110 Locations in genome: 37130160 37130142 37130137 37130116 37130105 Upstream nucleotide (in genome): c c t a c Upstream nucleotide summary: a: 1, c: 3, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): g g a t g Downstream nucleotide summary: a: 1, c: 0, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr9:37129969-37130214 (+) ctcacgcctgtaatcccaacactttgagaggccgaggcgggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggcgaaaccccatctctactaaaaataaataaattagctgggagtggtggcaggcacctgtaatcccagctacttgggaggctaaggcaggagaattgcttgacccaggaggtggaggttgcagtgagctgagattgcaccattgcactccagcctgggtg >AV699830:1-246 (-) ctcacgcctgtaatcccaacactttgagaggccgaggcgggtggatcacctgaggtcaggagttcgagaccagcctggccaacatggcgaaaccccatctctactaaaaataaataaattagctgggagtggtggcgggcacctgtagtcccagctacttgggaggctgaggcgggagaattgcttgacccgggaggtggaggttgcagtgagctgagattgcaccattgcactccagcctgggtg End editing Edited EST: DB296594, type: ag Aligns to: chrX:149120717-149121272 (+-) All mismatches: ag (454), ag (467), ag (476), ag (489), ag (490), ag (494), ag (508), ag (538), ag (543), ag (544), ag (545), Editing mismatches: 11, all mismatches: 11, alignment length: 556, cluster length: 92, total number of As: 23 Locations in RNA: 454 467 476 489 490 494 508 538 543 544 545 Locations in genome: 149120819 149120806 149120797 149120784 149120783 149120779 149120765 149120735 149120730 149120729 149120728 Upstream nucleotide (in genome): t a t a c c g g a a t Upstream nucleotide summary: a: 4, c: 2, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): c a g t a a a g g a a Downstream nucleotide summary: a: 6, c: 1, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 1, ca: 2, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chrX:149120717-149121272 (+) aaattttttttaaagatgagatctcactatgttgcccaggctggtctgaaattcctgtcctcaagcaatcctcctgccttagcctcccaaagtgctgagattacaggcatgagctaccatgcctggcctaaaacatttttaatggaagtataatttgcaaacagaaaacatgcccaaatattaagtgaatgcactgatgaacattcacaacttaacaagatagccagcacttaaatcacaaaatagaacaccgctaggacctctttgtaataccctccaagtcactacttctgcccaaaggtaatcgctattttgcaacattttttattactttatataaatgagatcgtacactgcgtaatcttattactgtctggatttttatattaaatattgcttgtgagattcatccatgttgtcatgtcagcaatactttattctcattgccatatactattccatttttatcagtataccatgatatatttacccattctgctatttgtacatactggaattgttcccaggtttttgtaatacaagcaaagctgctatg >DB296594:1-556 (-) aaattttttttgggnatgggatctcactatgttgcccaggctggtntggaattcctgtcctcgagcggtcctcctgccttggcctcccagagtgctgagatngcaggcatgagctaccatgcctggcctaaaacatttttaatggaagtataatttgcaaacagaaaacatgcccaaatattaagtgaatgcactgatgaacattcacaacttaacaagatagccagcacttaaatcacaaaatagaacaccgctaggacctctttgtaataccctccaagtcactacttctgcccaaaggtaatcgctattttgcaacattttttattactttatataaatgagatcgtacactgcgtaatcttattactgtctggatttttatattaaatattgcttgtgagattcatccatgttgtcatgtcagcaatactttattctcattgccatatactattccatttttatcagtataccatgatatatttacccattctgctatttgtacatactggaattgttcccaggtttttgtaatacaagcaaagctgctatg End editing Edited EST: DW432105, type: ag Aligns to: chrX:46730500-46730757 (+-) All mismatches: ag (9), ag (47), ag (112), ag (126), ag (129), ag (141), ag (205), ag (206), ag (210), Editing mismatches: 9, all mismatches: 9, alignment length: 258, cluster length: 202, total number of As: 43 Locations in RNA: 9 47 112 126 129 141 205 206 210 Locations in genome: 46730757 46730719 46730654 46730640 46730637 46730625 46730561 46730560 46730556 Upstream nucleotide (in genome): c a c t c t a c c Upstream nucleotide summary: a: 2, c: 5, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): n g c g g t t a a Downstream nucleotide summary: a: 2, c: 1, g: 3, t: 2, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 2, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 1, other: 1 >chrX:46730500-46730757 (+) tctcgtcacccaggctggagtgcagtggcacactgcaacctccgcctcccgggttcaagcaattgtcctgcctcagcctcccgagtagctgggattacaggtgcccgccaccacgcccggctaatatttgtattttcagtagagatggggtttcaccatgttggccaggctagtctcaaactcctgacatcaggtgatctgcccgcctcagcctcccaaagtgctgggattacaggtgcgagccaccacacccggcca >DW432105:9-266 (-) tctcgtcacccaggctggagtgcagtggcacactgcaacctccgcctcccgggttcgagcggttgtcctgcctcagcctcccgagtagctgggattacaggtgcccgccaccacgcccggctaatgtttgtattttcggtggagatggggtttcgccatgttggccaggctagtctcaaactcctgacatcaggtgatctgcccgcctcagcctcccaaggtgctgggattacaggtgcgagccaccacacccggccg End editing Edited EST: T08252, type: ag Aligns to: chr10:88800806-88801084 (-+) All mismatches: ag (132), ag (136), ag (138), ag (139), at (215), ag (230), ag (236), ag (237), ag (240), ag (244), ag (276), Editing mismatches: 10, all mismatches: 11, alignment length: 278, cluster length: 146, total number of As: 39 Locations in RNA: 132 136 138 139 230 236 237 240 244 276 Locations in genome: 88800953 88800949 88800947 88800946 88800854 88800848 88800847 88800844 88800840 88800808 Upstream nucleotide (in genome): c t t a a c a a t c Upstream nucleotide summary: a: 4, c: 3, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): c t a t a a a a g g Downstream nucleotide summary: a: 5, c: 1, g: 2, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 0, at: 1, ca: 1, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 1, other: 0 >chr10:88800806-88801084 (-) agcacatacactaaaattggaacaatacagagattagcctggcccctgtgcaaggatgacatgcaaattcgtgaagtgtttcatatttattttattaaaaaaaaaaaaaaagaccgggcacggtggtttacacctataatcctgacactttgggaggccgaggtgggtgggtcatgagttcaggagatcgagaccatcctggccaatatggtgaaaccccgtctctactaaaatacaaaaaattagctgggcatggtggtgcgcacctgtattcccagc >T08252:1-278 (+) agcacatacactaaaattggaacaatacagagattagcctggcccctgtgcaaggatgacatgcannttcgtgaagtgtttcatatttattttattaaaaaaaaaaaaaaagaccgggcacggtggtttacgcctgtggtcctgacactttgggaggccgaggtgggtgggtcatgagttcaggagatcgagaccatcctggccaatatggtgat-ccccgtctctactagaatacggaagattggctgggcatggtngtgcgcacctgtattcccggc End editing Edited EST: H52551, type: ag Aligns to: chr10:103650975-103651347 (-+) All mismatches: ag (113), ag (126), ag (190), ag (191), ag (199), ag (200), ag (201), ag (206), gt (242), ag (256), ag (273), ag (282), Editing mismatches: 11, all mismatches: 12, alignment length: 372, cluster length: 170, total number of As: 48 Locations in RNA: 113 126 190 191 199 200 201 206 256 273 282 Locations in genome: 103651233 103651220 103651156 103651155 103651147 103651146 103651145 103651140 103651090 103651073 103651064 Upstream nucleotide (in genome): c a c a g a a c a a c Upstream nucleotide summary: a: 6, c: 4, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): c t a t a a c t t g g Downstream nucleotide summary: a: 3, c: 2, g: 2, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 3, ca: 1, cc: 1, cg: 1, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr10:103650975-103651347 (-) caggatatgcatttaattgtcatatctccccagtgatttgtgacaatttctcaactcttgtttttcatgacttttagagtcttaagaaagtactggctgggcacggtggctcacacctgtaatcccaatactttgggagaccaaggtgagtggatcacctgaaaggtcaggagtttgagaacagcttggccaatgtggtgaaaccccatctctattaaaaatacaaaattagctggtcatggtggcgggggcctgtaatcccagcttcttgggaagctgaggcagaagaattgcttaaacccggaaggtggaggttgcagggagctgagatcgcaccatt-gcactccagcctgggcaacaagagcaaaactcc >H52551:1-372 (+) caggatatgcatttaattgtcatatct--ccagtgatttgtgacaatttctcaactcttgtttttcatgacttttagagtcttaagaaagtactggctgggcacggtggctcacgcctgtaatcccagtactttgggagaccaaggtgagtggatcacctgaaaggtcaggagtttnagaacagcttggccggtgtggtngggccccgtctctattaaaaatacaaaattagctggtcatggttgcnggggcctgtngtcccagcttcttnggaggctgaggcggaagaattgcttaaacccggaaggtggaggttncagggagctgagatcgcaccatttgcactccagcctgggcaacaagagcaaaactcc End editing Edited EST: DB140423, type: ag Aligns to: chr10:102251867-102252419 (-+) All mismatches: ag (162), ag (177), ag (214), ag (236), ag (237), ag (245), ag (275), ag (301), ag (302), ag (315), ag (362), Editing mismatches: 11, all mismatches: 11, alignment length: 552, cluster length: 201, total number of As: 54 Locations in RNA: 162 177 214 236 237 245 275 301 302 315 362 Locations in genome: 102252258 102252243 102252206 102252184 102252183 102252175 102252145 102252119 102252118 102252105 102252058 Upstream nucleotide (in genome): t c c c a g t t a c c Upstream nucleotide summary: a: 2, c: 5, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): c c g a c g a a t g g Downstream nucleotide summary: a: 3, c: 3, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 1, ca: 1, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr10:102251867-102252419 (-) ctaatagacagtcatgctgtctacaaatctgcaaatagatagttttctttcttttcaatctatatgcatttaatttctttcttatgccttattgtagtgactaggacttccagtctctgttaaataagaatagtgaacataagccaggcgctgtggctcatacctgtaatcccagcactttgggaaactgaggtgggtggatcacctaaggtcaggagttgagaccagcctggccaacatggtgagaccccatctctactaaaaatataaaattaaccgggcatggtggcgcatgcctgtaatcccagctactcaggaggcaaggctggagagtcgcttgaacccgggaggtggaggttgcagtgagctgagattgtgccattgcactccagcctgggcaccaagagcgaaactctgtctcaaaaaaaa-taaataaatagtgaacatgaatgttcttgccttgtttccagtcttagaggaaaaacattcaatatttcagcattaagcatgatgttagctttaggtttttcacagatgctctttatgagaccaa >DB140423:1-552 (+) ctaatagacagtcatgctgtctacaaatctgcaaatagatagttttctttcttttcaatctatatgcatttaatttctttcttatgccttattgtagtgactaggacttccagtctctgttaaataagaatagtgaacataagccaggcgctgtggctcatgcctgtaatcccagcgctttgggaaactgaggtgggtggatcacctaaggtcgggagttgagaccagcctggccggcatggtgggaccccatctctactaaaaatataaaattgaccgggcatggtggcgcatgcctgtggtcccagctactcgggaggcaaggctggagagtcgcttgaacccgggaggtggaggttgcggtgagctgagattgtgccattgcactccagcctgggcaccaagagcgaaactctgtctcaaaaaaaaataaataaatagtgaacatgaatgttcttgcctt-tt-ccagtcttagaggaaaaacattcaatatttcagcattaagcatgatgttagctttaggtttttcacagatgctctttatgagaccaa End editing Edited EST: C15897, type: ag Aligns to: chr10:70238500-70238801 (-+) All mismatches: ag (123), ag (149), ag (155), ag (159), ag (195), ag (215), ag (219), Editing mismatches: 7, all mismatches: 7, alignment length: 300, cluster length: 97, total number of As: 21 Locations in RNA: 123 149 155 159 195 215 219 Locations in genome: 70238679 70238653 70238647 70238643 70238607 70238587 70238583 Upstream nucleotide (in genome): t t c t c g c Upstream nucleotide summary: a: 0, c: 3, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g g g c g g a Downstream nucleotide summary: a: 1, c: 1, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 1, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr10:70238500-70238801 (-) gtggctcacgcctgtaatcccagcactttgggaggccaaggtgggcggatcacgtggtcaggagatcaagaccatcctggccaacatggtgaaatcccatctctactaaaaatataaaaattagccaggcatggtggtgggcgcctgtagtcccagctacttgggaggctgaggtaggagaattgcttgaacccagaaggcggaggttgcagtgagccaagattgccccactgcactccagcctgggtgacagagtgagactctgtcccaaaaaataaaaataaaaataaatgaatatataa >C15897:1-300 (+) gtggctcacgcctgtaatcccagcactttgggaggccaaggtgggcggatcacgtggtcaggagatcaagaccatcctggccaacatggtgaaatcccatctctactaaaaatataaaaattggccaggcatggtggtgggcgcctgtggtcccggctgcttgggaggctgaggtaggagaattgcttgaacccggamggcggaggttgcagtgggccgagattgccccactgcactccagcctgggtgacagagtgagactctgtcccaaaaa-taaaaataaaa-taaatgaatatataa End editing Edited EST: AW239007, type: ga Aligns to: chr10:75157939-75158143 (-+) All mismatches: ga (178), ga (179), ga (181), ga (187), ga (198), ga (203), ga (221), ga (247), ga (248), ga (268), ga (269), Editing mismatches: 11, all mismatches: 11, alignment length: 205, cluster length: 92, total number of Gs: 30 Locations in RNA: 178 179 181 187 198 203 221 247 248 268 269 Locations in genome: 75158032 75158031 75158029 75158023 75158012 75158007 75157989 75157963 75157962 75157942 75157941 Upstream nucleotide (in genome): a g a a c g g a g c g Upstream nucleotide summary: a: 4, c: 2, g: 5, t: 0, other: 0 Downstream nucleotide (in genome): g a c g c a a g g g a Downstream nucleotide summary: a: 4, c: 2, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 3, at: 0, ca: 0, cc: 1, cg: 1, ct: 0, ga: 4, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr10:75157939-75158143 (-) cctgcaggtcaggagtcatcttttcccccttctggtcagtatccttatcctagtggctttcctccaatgggaggaggtgcctacccacaagtgccaagtagtggctacccaggagctggaggctaccctgcgcctggaggttatccagcccctggaggctatcctggtgccccacagccagggggagctccatcctatcccggag >AW239007:67-271 (+) cctgcaggtcaggagtcatcttttcccccttctggtcagtatccttatcctantggctttcctccaatgggaggaggtgcctacccacaantgccaantantggctacccnaaaactggaagctaccctgcacctgaaggttatccancccctgaaggctatcctggtgccccacagccaaagggagctccatcctatcccaaag End editing Edited EST: BM726441, type: ag Aligns to: chr11:61177300-61177662 (-+) All mismatches: ag (264), ag (272), ag (277), ag (283), ag (317), ag (339), ag (355), Editing mismatches: 7, all mismatches: 7, alignment length: 362, cluster length: 92, total number of As: 17 Locations in RNA: 264 272 277 283 317 339 355 Locations in genome: 61177398 61177390 61177385 61177379 61177345 61177323 61177307 Upstream nucleotide (in genome): c c c a c t c Upstream nucleotide summary: a: 1, c: 5, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): t g c c g c c Downstream nucleotide summary: a: 0, c: 4, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 0, ca: 0, cc: 2, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr11:61177300-61177662 (-) aggaggtcgaggctgcagtgatctgtgattgcaccactgcactctggcctgagcgacagtgagaccttgtctgaaaaaaggtagggaggaggggcgggtgggtgcctcatgcctgtaatcccatcacttcagtaatttgggaggcagaggctagaggatcacttaagcaggagtttgagaccagcctgagcaacatagtgaaaccctatctttttttttttgagacagagcctcactttgccgcccacgctggagtatagtggcatgatctcagctcactgcaacccccacttcccgggttcaagctattctgcctcagcctccccagcagctggggctacaggcgcgcgtcaccacgcccgc >BM726441:1-362 (+) aggaggtcgaggctgcagtgatctgtgattgcaccactgcactctggcctgagcgacagtgagaccttgtctgaaaaaaggtagggaggaggggcgggtgggtgcctcatgcctgtaatcccatcacttcagtaatttgggaggcagaggctagaggatcacttaagcaggagtttgagaccagcctgagcaacatagtgaaaccctatctttttttttttgagacagagcc-cactttgccgcccacgctggagtatagtggcgtgatctcggctcgctgcagcccccacttcccgggttcaagctattctgcctcggcctccccagcagctggggctgcaggcgcgcgtcaccgcgcccgc End editing Edited EST: BU603869, type: ga Aligns to: chr11:62392302-62392429 (-+) All mismatches: ga (74), ga (77), ga (81), ga (82), ga (85), ga (86), Editing mismatches: 6, all mismatches: 6, alignment length: 128, cluster length: 13, total number of Gs: 10 Locations in RNA: 74 77 81 82 85 86 Locations in genome: 62392427 62392425 62392421 62392420 62392416 62392415 Upstream nucleotide (in genome): g t g g g g Upstream nucleotide summary: a: 0, c: 0, g: 5, t: 1, other: 0 Downstream nucleotide (in genome): t g g t g g Downstream nucleotide summary: a: 0, c: 0, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 3, gt: 2, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr11:62392302-62392429 (-) ggg-tggggggttg-ggggaggactaatggggagtcggggaatatttgtgggtattttttttacttcctcttggttcccagctgtgacacgttttgatcaaaggagaaacaataaagggataaaccataa >BU603869:72-199 (+) ggattagggaa--gcaaggaggactaatggggagtcggggaatatttgtgggtattttttttacttcctcttggttcccagctgtgacacgttttgatcaaaggagaaacaataaagggataaaccntaa End editing Edited EST: BU963213, type: ga Aligns to: chr11:73704655-73704963 (-+) All mismatches: ga (300), ga (302), ga (304), ga (306), ga (308), ga (310), ga (312), Editing mismatches: 7, all mismatches: 7, alignment length: 312, cluster length: 13, total number of Gs: 7 Locations in RNA: 300 302 304 306 308 310 312 Locations in genome: 73704669 73704667 73704665 73704663 73704661 73704659 73704657 Upstream nucleotide (in genome): a a a a a a a Upstream nucleotide summary: a: 7, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a a a Downstream nucleotide summary: a: 7, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 7, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr11:73704655-73704963 (-) gggccaggcgtgatggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcatttgaagtcaggagttcaagaccagcctggcccacctttactaaaaatacaaaaattagtcaggtgtggtggcagggtggcaggtgcctgtagtcccagctactccagagggtgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccaaggttgtgccactgcactccagcctgggcaacagagtgagactctgtctcaaaaaaaaaaaaaaa--a-aagagagagagagagaa >BU963213:3-314 (+) gggccaggcgtgatggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatcatttgaagtcaggagttcaagaccagcctggcccacctttactaaaaatacaaaaattagtcaggtgtggtggcagggtggcaggtgcctgtagtcccagctactccagagggtgaggcaggagaatcgcttgaacccaggaggtggaggttgcagtgagccaaggttgtgccactgcactccagcctgggcaacagagtgagactctgtctcaaaaaaaaaaaaaaaccanaaaaaaaaaaaaaaaaa End editing Edited EST: AW265248, type: ga Aligns to: chr11:75115715-75115913 (-+) All mismatches: ga (257), ga (264), ga (268), ga (269), ga (279), ga (305), ga (326), ga (329), Editing mismatches: 8, all mismatches: 8, alignment length: 199, cluster length: 73, total number of Gs: 23 Locations in RNA: 257 264 268 269 279 305 326 329 Locations in genome: 75115798 75115791 75115787 75115786 75115776 75115750 75115729 75115726 Upstream nucleotide (in genome): c a a g a a t t Upstream nucleotide summary: a: 4, c: 1, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): t g g g g g a c Downstream nucleotide summary: a: 1, c: 1, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 4, at: 0, ca: 0, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr11:75115715-75115913 (-) cctgttatgctgtggggactggctggggcatggcaggcggctctggcttcccacccttctgttctgagatgggggtggtgggcagtatctcatctttgggttccacaatgctcacgtggtcaggcaggggcttcttagggccaatcttaccagttgggtcccagggcagcatgatcttcaccttgatgccca-gcacacc >AW265248:142-340 (+) cctgttatgctgtggggactggctggggcatggcaggcggctctggcttcccacccttctgttctgagatgggggtggtgggcagtatctcatctttgggttccacaatgctcacatggtcaagcaaaggcttcttaaggccaatcttaccagttgggtcccaaggcagcatgatcttcaccttaatacccang-acacc End editing Edited EST: H80803, type: ag Aligns to: chr12:6995604-6995995 (-+) All mismatches: ag (288), ag (309), ag (316), ag (330), ag (339), ag (394), Editing mismatches: 6, all mismatches: 6, alignment length: 394, cluster length: 105, total number of As: 28 Locations in RNA: 288 309 316 330 339 394 Locations in genome: 6995708 6995688 6995681 6995667 6995658 6995604 Upstream nucleotide (in genome): c a c t c g Upstream nucleotide summary: a: 1, c: 3, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): g g g g g n Downstream nucleotide summary: a: 0, c: 0, g: 5, t: 0, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 1 >chr12:6995604-6995995 (-) tttagatatatgtggggaaaagcaaaagagatcagattgttactgtgtctgtgtagaaagaagtagacataggagactccattttgttctgtactaagaaaaattcttctgccttgagattctgttaatctataaccttacccccaaccccgtgctctctgaaacatgtgctgtgtcaactcagagttaaatggattaagggcggtgcaagatgtgctttgttaaacagatgcttgaaggcagcatgctccttaagagtcatcaccactccctaatctcaagtacccagggacacaaacactgcgg-aagtccgcagggacctctgcctaggaaagccaggtattgtccaaggtttctccccatatgatagtctgaaatatgg-cctcgtggga >H80803:1-394 (+) tttagatatatgtggggaaaagcaaaagagatcagattgttactgtgtctgtgtagaaagaagtagacataggagactccattttgttctgtactaagaaaaattcttctgccttgagattctgttaatctataaccttacccccaaccccgtgctctctgaaacatgtgctgtgtcaactcagagttaaatggattaagggcggtgcaagatgtgctttgttaaacagatgcttgaaggcagcatgctccttaagagtcatcaccactccctaatctcaagtacccggggacacaaacactgcggnaggtccgcggggacctctgcctgggnaagccgggtattgtccaaggtttctccccatatgntagtctgaaatatgggcctngtgggg End editing Edited EST: DA917936, type: ag Aligns to: chr12:122777332-122777587 (-+) All mismatches: ag (44), ag (46), ag (186), ag (187), ag (194), ag (205), ag (222), ag (227), ag (251), Editing mismatches: 9, all mismatches: 9, alignment length: 256, cluster length: 208, total number of As: 34 Locations in RNA: 44 46 186 187 194 205 222 227 251 Locations in genome: 122777544 122777542 122777402 122777401 122777394 122777383 122777366 122777361 122777337 Upstream nucleotide (in genome): c g t a t t c t g Upstream nucleotide summary: a: 1, c: 2, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): g g a t t g t g c Downstream nucleotide summary: a: 1, c: 1, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 1, ct: 1, ga: 0, gc: 1, gg: 1, gt: 0, ta: 1, tc: 0, tg: 2, tt: 1, other: 0 >chr12:122777332-122777587 (-) ctttatactttctttgccttttttttttttttttttttgagacagagtcttgctcttttgcccaggctggactgcagtggtgctatctcggcccactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccgcgcccggctaattttttatatttttagtagagacggggtttcaccatgttagccaggatggtctcgatctcctgacctcg >DA917936:1-256 (+) ctttatactttctttgccttttttttttttttttttttgagacggggtcttgctcttttgcccaggctggactgcagtggtgctatctcggcccactgcaagctccgcctcccgggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggcgcccaccaccgcgcccggctggttttttgtatttttagtggagacggggtttcaccgtgttggccaggatggtctcgatctcctggcctcg End editing Edited EST: DW463143, type: ag Aligns to: chr12:57459473-57459819 (-+) All mismatches: ag (257), ag (271), ag (279), ag (285), ag (288), ag (335), ag (352), ag (358), ag (359), ag (360), Editing mismatches: 10, all mismatches: 10, alignment length: 347, cluster length: 104, total number of As: 23 Locations in RNA: 257 271 279 285 288 335 352 358 359 360 Locations in genome: 57459579 57459565 57459557 57459551 57459548 57459501 57459484 57459478 57459477 57459476 Upstream nucleotide (in genome): t c t c c g c g a a Upstream nucleotide summary: a: 2, c: 4, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): g g g g c g t a a c Downstream nucleotide summary: a: 2, c: 2, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 0, ca: 0, cc: 1, cg: 2, ct: 1, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr12:57459473-57459819 (-) gtgatcctcccatctcagcctcccaaagtgctgggattacaggcttgagccaccatgcccggccagatacaacttttttaaagctaaaggctgatccagagcaagaccctaactgtcttcaattctgtgaagggtgagaggtgaggaagcctcagaagaaaagtttacagctagtgaaggttcttggttcatgagatttaaggaaagaagctgtcttattacataagtgcaaggtaggctaggcgtggtggctcaggcctgtagtcccagcactttgggaggctgaggcgggcagatcacttgagcccagggagttcgagaccagcctgagcaacatggtgaaaccc >DW463143:17-363 (+) gtgatcctcccatctcagcctcccaaagtgctgggattacaggcttgagccaccatgcccggccagatacaacttttttaaagctaaaggctgatccagagcaagaccctaactgtcttcaattctgtgaagggtgagaggtgaggaagcctcagaagaaaagtttacagctagtgaaggttcttggttcatgagatttaaggaaagaagctgtcttattacataagtgcaaggtaggctgggcgtggtggctcgggcctgtggtcccggcgctttgggaggctgaggcgggcagatcacttgagcccagggagttcgggaccagcctgagcaacgtggtggggccc End editing Edited EST: GD152319, type: ag Aligns to: chr12:80263877-80264019 (-+) All mismatches: ag (126), ag (127), ag (128), ag (129), ag (130), ag (131), ag (133), ag (137), ag (138), ta (140), ag (141), ag (143), Editing mismatches: 11, all mismatches: 12, alignment length: 143, cluster length: 18, total number of As: 15 Locations in RNA: 126 127 128 129 130 131 133 137 138 141 143 Locations in genome: 80263894 80263893 80263892 80263891 80263890 80263889 80263887 80263883 80263882 80263879 80263877 Upstream nucleotide (in genome): a a a a a a g a a t c Upstream nucleotide summary: a: 8, c: 1, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): a a a a a g a a a c n Downstream nucleotide summary: a: 8, c: 1, g: 1, t: 0, other: 1 Dinucleotide summary: aa: 7, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 1 >chr12:80263877-80264019 (-) aaggcaggagaatttctggaggctaaggcaggagaattgcttgagcctgggaggcagaggttgcagtgagctgagatagcaccattgcacttaagcctaggtgacaagagtgaaaccttgtttcaaaaaaagaaaaaaataca >GD152319:1-143 (+) aaggcaggagaatttctggaggctaaggcaggagaattgcttgagcctgggaggcagaggttgcagtgagctgagatagcaccattgcacttaagcctaggtgacaagagtgaaaccttgtttcaggggggggaaaggaagcg End editing Edited EST: BI850438, type: ag Aligns to: chr12:113635562-113636181 (-+) All mismatches: ag (216), ag (224), ag (235), ag (256), ag (290), ag (297), ag (339), ag (376), ag (390), ag (391), ag (430), Editing mismatches: 11, all mismatches: 11, alignment length: 620, cluster length: 214, total number of As: 41 Locations in RNA: 216 224 235 256 290 297 339 376 390 391 430 Locations in genome: 113635978 113635970 113635960 113635939 113635905 113635898 113635856 113635819 113635805 113635804 113635765 Upstream nucleotide (in genome): c c c a g c t c c a t Upstream nucleotide summary: a: 2, c: 6, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): t g a g g g g a a g c Downstream nucleotide summary: a: 3, c: 1, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 3, cc: 0, cg: 2, ct: 1, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr12:113635562-113636181 (-) ctcaccctttcctgagaatacagcctcctcttgctgacactccctctgtgacacagccttttccttggaccttgttggggaccactttcctcctcgccactcccttccagtcacactggcttgatttctgtcctttaattttttttttaatttttattttttgagacagtcttgctctgtcacccaggctggagtgtggtggcatgatctcagctcactg-caaactctgcctcctgggttcaagtgattctcctgcctcagcctcctgagtagctgagattacaggtgtgcatcaccatgcctggctaatttttgtatctttagtagagatggggttttggcatgttggccaggctggtctcaaactcctggcctcaagtgacccgcctgcctcagcctcccaaagcgctgggattacaggcgtaagccaccacgccaggctgatttctgtcctttaaacagcacaagcttgttcctacctcagggcctttgcacctgctgctttctctgcctaggatgtcctggaaccaggctg-ctggcatcaaattcaggctctgccacccattagctctgtcaccttgggcaagtaagatagcatgtctgagcctcagttctctccc >BI850438:13-632 (+) ctcaccctttcctgagaatacagcctcctcttgctgacactccctctgtgacacagccttttccttggaccttgttggggaccactttcctcctcgccactcccttccagtcacactggcttgatttctgtcctttaattttttttttaatttttattttttgagacagtcttgctctgtcacccaggctggagtgtggtggcgtgatctcggctcactgacgaactctgcctcctgggttcaggtgattctcctgcctcagcctcctgagtagctgggattacgggtgtgcatcaccatgcctggctaatttttgtatctttagtggagatggggttttggcatgttggccaggctggtctcgaactcctggcctcgggtgacccgcctgcctcagcctcccaaagcgctgggattgcaggcgtaagccaccacgccaggctgatttctgtcctttaa-cagcacaagcttgttcctacctcagggcctttgcacctgctgctttctctgcctaggatgtcctggaaccaggctggctg-catcaaattcaggctctgccacccattanctctgtcaccttgggcaagtaagatagcatgtctgagcctcagttctctccc End editing Edited EST: BX324590, type: ga Aligns to: chr12:49725350-49725483 (-+) All mismatches: ga (52), ga (55), ga (59), ga (63), ga (73), ga (90), ga (92), ga (105), ga (122), ga (129), ag (131), Editing mismatches: 10, all mismatches: 11, alignment length: 132, cluster length: 79, total number of Gs: 29 Locations in RNA: 52 55 59 63 73 90 92 105 122 129 Locations in genome: 49725431 49725428 49725424 49725420 49725410 49725393 49725391 49725378 49725361 49725353 Upstream nucleotide (in genome): a a c a t a a a t t Upstream nucleotide summary: a: 6, c: 1, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): a t g g g a c c a g Downstream nucleotide summary: a: 3, c: 2, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 1, at: 1, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 0 >chr12:49725350-49725483 (-) ggcggctcccagtcccatgggcagaccgacaataaataagggctaaaaggaagaagtacggcagggcaggagtggttgtctcatcatggagagccctggggggcagcagaaccaactggaatgaaacactggag >BX324590:1-132 (+) ggcggct-ccagtcccatnggcanaccgacaataaataagggctaaaaggaaaaaatacagmaaggcaggagtagttgtctcatcatggaaaaccctggggggcaacagaaccaactggaataaaacac-aggg End editing Edited EST: BC038212, type: ga Aligns to: chr12:26098687-26099069 (-+) All mismatches: ga (632), ga (635), ga (636), ga (641), ga (642), ga (643), Editing mismatches: 6, all mismatches: 6, alignment length: 380, cluster length: 14, total number of Gs: 6 Locations in RNA: 632 635 636 641 642 643 Locations in genome: 26098700 26098695 26098694 26098689 26098688 26098687 Upstream nucleotide (in genome): a t g a g g Upstream nucleotide summary: a: 2, c: 0, g: 3, t: 1, other: 0 Downstream nucleotide (in genome): a g a g g n Downstream nucleotide summary: a: 2, c: 0, g: 3, t: 0, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 1 >chr12:26098687-26099069 (-) ggtcaaggaagcttttcctgatccactaactaaggacaatcaaacccttcatgatctagaatctggagactgtgtcttctgggaatagtatcagagaaagactgcccttactgcccacatgtagcaaaactttgagacgttgaattatgggtccataatctcacaactcagaggggcacctctagactcttggaactgtatatctattggagactttaaggtaaagctgaacagagagacgtttttctccagaagcagacagcaccatagtcatggacagctttcccaagatcacagatcaagacttctctgccgtcatgagactcataacctcttaattttttcttgcttatgcttctgtgaacaatagaattggaaaaggg >BC038212:264-643 (+) ggtcaaggaagcttttcctgatccactaactaaggacaatcaaacccttcatgatctagaatctggagactgtgtcttctgggaatagtatcagagaaagactgcccttactgcccacatgtagcaaaactttgagacgttgaattatgggtccataatctcacaactcagaggggcacctctagactcttggaactgtatatctattggagactttaaggtaaagctgaacagagagacgtttttctccagaagcagacagcaccatagtcatggacagctttcccaagatcacagatcaagacttctctgccgtcatgagactcataacctcttaattttttcttgcttatgcttctgtgaacaa-aaaa--aaaaaaaaa End editing Edited EST: DB127676, type: ag Aligns to: chr13:52995991-52996536 (-+) All mismatches: ag (146), ag (158), ag (159), ag (178), ag (180), ag (181), ct (212), ag (220), ag (227), ag (248), ag (255), Editing mismatches: 10, all mismatches: 11, alignment length: 548, cluster length: 110, total number of As: 42 Locations in RNA: 146 158 159 178 180 181 220 227 248 255 Locations in genome: 52996392 52996380 52996379 52996360 52996358 52996357 52996318 52996311 52996290 52996283 Upstream nucleotide (in genome): a t a c g a a t t t Upstream nucleotide summary: a: 4, c: 1, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g a g g a a a a g g Downstream nucleotide summary: a: 5, c: 0, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 2, tt: 0, other: 0 >chr13:52995991-52996536 (-) ttttaaaaaagcaaagatagaatcaacctaagtgtccatcagtgatgaacggataaagaaaatgtcagatacatacaaatggaatacaattcagtcataaaaaaaatgaaatcacatcatttgcagcaacatggagaaa-ctggaagtccttatgttaagtgaagtaagccagacacagaaagacaaatattgcatgttctcactcatgtgcgagctaaaaaagctaatctcatggaggtagagaatagatgatagatatcagagactgggaaaggtgtataagtgggagcggggaagaagaaatgttggttaataggtacaaacatactgttagatggaataaattcgaatgttcaatagcagagtagggaggcaacaatgtattgtatatttcaaagtagctagaagggaggacttgaaatgttcctaaaacatagacatgataaatacatcaggtaataggtacccccaaataaccctgacttgatcattacacatttt-atgcatgtgtattaataaaaatagcccctgtaccccataaatatg >DB127676:1-548 (+) ttttaaaaaagcaaagatagaatcaacctaagtgtccatcagtgatgaacggataaagaaaatgtcagatacatacaaatggaatacaattcagtcataaaaaaaatgaaatcacatcatttgcagcaacatggagaaacctggaggtccttatgttgggtgaagtaagccagacacggggagacaaatattgcatgttctcactcatgtgtgagctaagaaagctgatctcatggaggtagagaatggatgatggatatcagagactgggaaaggtgtataagtgggagcggggaagaagaaatgttggttaataggtacaaacatactgttagatggaataaattcgaatgttcaatagcagagtagggaggcaacaatgtattgtatatttcaaagtagctagaagggaggacttgaaatgttcctaaaacatagacatgataaatacatcaggtaataggtacccccaaataaccctgacttgatcattacacatttttatgcatgtgtattaataaaaatagcccctgtaccccataaatatg End editing Edited EST: DW420018, type: ag Aligns to: chr13:53052306-53052591 (-+) All mismatches: ag (228), ag (234), ag (242), ag (255), ag (258), ag (281), Editing mismatches: 6, all mismatches: 6, alignment length: 286, cluster length: 54, total number of As: 14 Locations in RNA: 228 234 242 255 258 281 Locations in genome: 53052380 53052374 53052366 53052353 53052350 53052327 Upstream nucleotide (in genome): t c c c g c Upstream nucleotide summary: a: 0, c: 4, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): g g g g g g Downstream nucleotide summary: a: 0, c: 0, g: 6, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr13:53052306-53052591 (-) attcaaggcactggggataaagcagtgaacaaaatagaaaataaaaatcctggccgggcgcggtggctcacgcctgtaatctcagcactttgggagaccgaggcgggcagatcatgagttcaagagatcgagaccatcctggataacacggtgaaaccacgtctctgctaaaaatacccaaaattagccgggtatggtggtgggtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcagagcttgcagtgagccgagat >DW420018:17-302 (+) attcaaggcactggggataaagcagtgaacaaaatagaaaataaaaatcctggccgggcgcggtggctcacgcctgtaatctcagcactttgggagaccgaggcgggcagatcatgagttcaagagatcgagaccatcctggataacacggtgaaaccacgtctctgctaaaaatacccaaaattagccgggtatggtggtgggtgcctgtggtcccggctactcgggaggctgaggcgggggaatggcgtgaacccgggaggcggagcttgcagtgagccgagat End editing Edited EST: CB266475, type: ag Aligns to: chr13:50485690-50486255 (-+) All mismatches: ag (379), ag (380), ag (386), ag (420), ag (425), at (448), ag (453), ag (457), ag (489), ag (509), ag (515), ag (520), Editing mismatches: 11, all mismatches: 12, alignment length: 566, cluster length: 142, total number of As: 45 Locations in RNA: 379 380 386 420 425 453 457 489 509 515 520 Locations in genome: 50485877 50485876 50485870 50485836 50485831 50485803 50485799 50485767 50485747 50485741 50485736 Upstream nucleotide (in genome): t a a g c t a t c t c Upstream nucleotide summary: a: 3, c: 3, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): a t c g g g a g c t g Downstream nucleotide summary: a: 2, c: 2, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 1, ca: 0, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 2, tt: 1, other: 0 >chr13:50485690-50486255 (-) agaggggcatcctatgaaacacttaatgatgctactcaaaactttcagggtcaccaaaacatggaaagtcagggaaactgccacacccaggaggagcttaagaggacatgacaagtgtaatgtggtaactggataggatgctggagcagaagaacattaggtgaaaactaaggaaatctgaataaaccatgaactttagttaataatgtatcattatatcattcatgaattgtaacaaatgaaccatactaacgtaagatgttaacaggagaaactaggagagtttatatatgggaactcaatgctgtcttctctttttctataaatacaaactgttctaaaaaactaagttgaccggaagtggtggctcacgcctgtaatcccaacactttgggaggccgaggcgggtggatcacctgaggtcaggagtttgagaccagcctggccaacatagcaaaaccccatctctactaaaaaatacaaaaattagccaggagaggtggcaggcacctgtatcccagctgctcgggaggctgaggcacgagaatcacttgaaaccgagaggc >CB266475:1-566 (+) agaggggcatcctatgaaacacttaatgatgctactcaaaactttcagggtcaccaaaacatggaaagtcagggaaactgccacacccaggaggagcttaagaggacatgacaagtgtaatgtggtaactggataggatgctggagcagaagaacattaggtgaaaactaaggaaatctgaataaaccatgaactttagttaataatgtatcattatatcattcatgaattgtaacaaatgaaccatactaacgtaagatgttaacaggagaaactaggagagtttatatatgggaactcaatgctgtcttctctttttctataaatacaaactgttctaaaaaactaagttgaccggaagtggtggctcacgcctgtggtcccagcactttgggaggccgaggcgggtggatcacctggggtcgggagtttgagaccagcctggcctacatggcagaaccccatctctactaaaaaatacaaaaattggccaggagaggtggcaggcgcctgtgtcccggctgctcgggaggctgangcacgagaatcacttgaaaccgagaggc End editing Edited EST: F04837, type: ag Aligns to: chr14:90053917-90054211 (-+) All mismatches: ag (16), ag (54), ag (78), ag (88), ag (102), ag (129), ag (148), ag (162), ag (202), ag (217), Editing mismatches: 10, all mismatches: 10, alignment length: 294, cluster length: 203, total number of As: 43 Locations in RNA: 16 54 78 88 102 129 148 162 202 217 Locations in genome: 90054196 90054158 90054134 90054124 90054110 90054083 90054063 90054049 90054009 90053994 Upstream nucleotide (in genome): t c c c c c t t c a Upstream nucleotide summary: a: 1, c: 6, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): c g g g g c a g a g Downstream nucleotide summary: a: 2, c: 2, g: 6, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 1, cc: 1, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr14:90053917-90054211 (-) ctgagacagagtcttactctttcacccaggctggagtgcagtggtgtggtctcagctcactgcaacctctgcctaccaggttcaagcagttttcctgcctcagcctcctgaaagctgggattacaggcacatgccaccacacctggctaatttttgtattttagtagagacgaggtttccccatatcgtccaggctggtctcaaactgctgacctcaagtgatctgcccgcctctgcctcccaaagtgcttggattacaggcatgagccactgtgcccggcctgatgcctgagct >F04837:1-294 (+) ctgagacagagtcttgctctttnacccaggctggagtgcagtggtgtggtctcggctcactgcaacctctgcctaccgggttcaagcggttttcctgcctcggcctcctgaaagctgggattacaggcgcatgc-accacacctggctgatttttgtattttggtagagacgaggtttccccatatcgtccaggctggtctcgaactgctgacctcaggtgatctgcccgcctctgcctcccaaagtgcttggattacaggcatgagccactgtgcccggcctgatgcctgagct End editing Edited EST: W01759, type: ag Aligns to: chr14:74032448-74032826 (-+) All mismatches: ag (184), ag (213), ag (214), ag (236), ag (243), ag (299), ag (306), Editing mismatches: 7, all mismatches: 7, alignment length: 376, cluster length: 124, total number of As: 31 Locations in RNA: 184 213 214 236 243 299 306 Locations in genome: 74032643 74032614 74032613 74032591 74032584 74032527 74032520 Upstream nucleotide (in genome): c t a c a t t Upstream nucleotide summary: a: 2, c: 2, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g a a g c a c Downstream nucleotide summary: a: 3, c: 2, g: 2, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 0, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr14:74032448-74032826 (-) tgaatgcaccaatcaacactctgtatctagctactctggtggggacttggagaacctttgtgtcaacactctgtatctaactattctggtggggacgtggagaacttttgtgtctagctgaggaattgtaaacgcaccaatcagtgccctgtcaaaacagacccctgggctctaccaatcagcaggatgtgagtggggccagataagagaataaaagcaggctgccctagccagcagtggcaacccgctggggtcccccttccacactgtggaaactttgttctttcgttctttgcaataaatcttactgctgctcactctttgcgtccacactgcctttatgagctctaacactcaccaccaaggtctgtagcttcac >W01759:1-376 (+) tgaatgcaccaatcaacactctgtatctagctactctggtggggacttggagaacctttgtgtcaacactctgtatctaactattctggtggggacgtggagaacttttgtgtctagctgaggaattgtaaacgcaccaatcagtgccctgtcaaaacagacccctgggctctaccaatcagcgggatgtgagtggggccagataagagaatggaagcaggctgccctagccagcggtggcagcccgctggggtcccccttccacactgtggaaactttgt-ctttcgttctttgcaatgaatcttgctgctgctcactctttgcgtccacactgcctttatgagctctaacactcaccaccaaggt-tgtan-ttcac End editing Edited EST: DA276287, type: ag Aligns to: chr14:45600671-45601034 (-+) All mismatches: ag (224), ag (236), ag (240), ag (278), ag (327), ag (356), Editing mismatches: 6, all mismatches: 6, alignment length: 363, cluster length: 133, total number of As: 26 Locations in RNA: 224 236 240 278 327 356 Locations in genome: 45600810 45600798 45600794 45600756 45600707 45600678 Upstream nucleotide (in genome): c a c c c t Upstream nucleotide summary: a: 1, c: 4, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): c t g g t t Downstream nucleotide summary: a: 0, c: 1, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 1, other: 0 >chr14:45600671-45601034 (-) atatttattaagttcttactgtgtgacaggctctatgctaaatgcattaaatggatttttgcattttatccttatatcaactctttgacgtagacgctgttattaatcttccactacagatatggaggctgagtctttagacaagcttagtcccctgtctagtgtcagacagctaggatttttttttttttttttttttttttgagacagagtcttgctctgtcacctaggctggaatgcagtggtgcgatctcggctcactgcaacctccacctcccaggttcacgccattctcctgcttcagcctcccgagctgggactacaggcatgcgccaccatggccagctaaattttgtatttttag >DA276287:1-363 (+) atatttattaagttcttactgtgtgacaggctctatgctaaatgcattaaatggatttttgcattttatccttatatcaactctttgacgtagacgctgttattaatcttccactacagatatggaggctgagtctttagacaagcttagtcccctgtctagtgtcagacagctagga-ttttttttttttttttttttttttgagacagagtcttgctctgtcgcctaggctggagtgcggnggtgcgatctcggctcactgcaacctccacctcccgggttcacgccattctcctgcttcagcctcccgagctgggactacaggcgtgcgccaccatggccagctaaattttgtgtttttag End editing Edited EST: DA174777, type: ag Aligns to: chr14:100801787-100802307 (-+) All mismatches: ag (314), ag (315), ag (367), ag (421), ag (427), ag (434), ag (446), ag (450), ag (456), ag (457), ag (470), Editing mismatches: 11, all mismatches: 11, alignment length: 522, cluster length: 157, total number of As: 45 Locations in RNA: 314 315 367 421 427 434 446 450 456 457 470 Locations in genome: 100801995 100801994 100801942 100801888 100801882 100801875 100801863 100801859 100801853 100801852 100801839 Upstream nucleotide (in genome): t a c t a c c c t a c Upstream nucleotide summary: a: 3, c: 5, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): a t g c t g g c a t g Downstream nucleotide summary: a: 2, c: 2, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 3, ca: 0, cc: 1, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr14:100801787-100802307 (-) aaaaaagttttagtgacacaggaaaatatgcctatgatagtgaaaaaaggataccaaatgaaaactcagggaggagttaactatgtttaaatgaaatgcacagggaaagaaatgtgaagaaaatctaccaaatgttagc-gggagacccacctctgggcatttttcaggtgggcaatttgtaggtgatttttctttactttgctgctgctttgtggtttgggtactttattaaatttgcttaatgagcatgcagtacaatcagaaaaagaaaaaattagcaagatttggctgggcgcagtggctcacgcctgtaatcctagcactttgggaggccgaggcaggtggggggagtggatcacgaggtcaggagatcgagaccagcctggccaatatggtgaaatcccatctctactaaaaatacaaaaattagccaggcgtggtggcaggcacctgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtga >DA174777:1-522 (+) aaaaaagttttagtgacacaggaaaatatgcctatgatagtgaaaaaaggataccaaatgaaaactcagggaggagttaactatgtttaaatgaaatgcacagggaaagaaatgtgaagaaaatctaccaaatgttagctgggagacccacctctgggcatttttcaggtgggcaatttgtaggtgatttttctttactttgctgctgctttgtggtttgggtactttattaaatttgcttaatgagcatgcagtacaatcagaaaaagaaaaaattagcaagatttggctgggcgcagtggctcacgcctgtggtcctagcactttgggaggccgaggcaggtggggggagtggatcacgaggtcgggagatcgagaccagcctggccaatatggtgaaatcccatctctactaaaaatgcaaaagttagccgggcgtggtggcgggcgcctgtggtcccagctactcgggaggctgaggcaggagaatcacttgaacctgggaggcggaggttgcagtga End editing Edited EST: BX440608, type: ag Aligns to: chr14:101302501-101302637 (-+) All mismatches: ag (371), ag (374), ag (378), ag (383), ag (397), Editing mismatches: 5, all mismatches: 5, alignment length: 138, cluster length: 27, total number of As: 9 Locations in RNA: 371 374 378 383 397 Locations in genome: 101302629 101302626 101302622 101302617 101302603 Upstream nucleotide (in genome): c g g g g Upstream nucleotide summary: a: 0, c: 1, g: 4, t: 0, other: 0 Downstream nucleotide (in genome): g a g g a Downstream nucleotide summary: a: 2, c: 0, g: 3, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 2, gc: 0, gg: 2, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr14:101302501-101302637 (-) cccaaaccaggaaggagacgagaggcccgccagga-agaagacttgggtccgggatggtgggccccatcagggcctcttccgcagcttccatccgcagttcttcagccgacccagccgggccacggcccacgtgcctt >BX440608:363-500 (+) cccanaccggggnggggncgggaggcccgccagggcagaagacttgggtccgggatggtgggccccatcagggcctcttccgcagcttccatccgcagttcttcagccgacccagccgggccacggcccacgtgcctt End editing Edited EST: AW317049, type: ga Aligns to: chr14:24607945-24608168 (-+) All mismatches: ga (108), ga (130), ga (138), ga (142), ga (167), ga (178), ga (179), ga (187), ga (207), ga (211), ga (214), Editing mismatches: 11, all mismatches: 11, alignment length: 224, cluster length: 107, total number of Gs: 26 Locations in RNA: 108 130 138 142 167 178 179 187 207 211 214 Locations in genome: 24608065 24608043 24608035 24608031 24608006 24607995 24607994 24607986 24607966 24607962 24607959 Upstream nucleotide (in genome): a a a a t t g t a t t Upstream nucleotide summary: a: 5, c: 0, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g a a g t g g a g a t Downstream nucleotide summary: a: 4, c: 0, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 3, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 0, tg: 1, tt: 2, other: 0 >chr14:24607945-24608168 (-) agtggtataactatatttattgtgcctgagaggcaaggtgagggaaaaatctcaacagaagcaagtttggggaaaatctggagtccccagtaaaaagcaggaaggtctctgctgtactcatcacagaatgggagagagggctctcaatagatcattccctttgtttctcccctgggcttcttgagcttctcgaagttcttcaggatgatgtcatataacacagc >AW317049:5-228 (+) agtggtataactatatttattgtgcctgagaggcaaggtgagggaaaaatctcaacagaagcaagtttggggaaaatctggagtccccagtaaaaagcaggaaagtctctgctgtactcatcacaaaatgggaaagaaggctctcaatagatcattccctttatttctcccctaagcttcttaagcttctcgaagttcttcaagataatatcatataacacagc End editing Edited EST: DA446942, type: ag Aligns to: chr15:73037515-73038079 (-+) All mismatches: ga (2), ag (293), ag (327), ag (374), ag (388), ag (396), ag (461), ag (498), ag (501), ag (516), ag (526), Editing mismatches: 10, all mismatches: 11, alignment length: 566, cluster length: 234, total number of As: 47 Locations in RNA: 293 327 374 388 396 461 498 501 516 526 Locations in genome: 73037788 73037754 73037707 73037693 73037685 73037620 73037583 73037580 73037565 73037555 Upstream nucleotide (in genome): t a c c c c c g t a Upstream nucleotide summary: a: 2, c: 5, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): a t a g a c a g g g Downstream nucleotide summary: a: 4, c: 1, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 3, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr15:73037515-73038079 (-) agttttgtaagaagctgccaaactgtcttccaaagtggttatactattttgcattcccaacatcgataaatgaacagtccattgctcaatatcctcaccagcatctggtggtgtcagtgttctggatttgggcattctaataggtatgtagtggtatctca-ttttaatttgcatttctctgatgatatatgatgtggaacatttttaaatatgtttatttgccatctgtgtatctttggtgaggtgaggggttttggtccattttctagtcaggttggtttttttgcttttaagtcagtttcgctgttgcccagactgatgtgcaatggtgcaatctccactcactgcaacctctgcctcccgggttccagcaattcttctgcctcagcctcccaagtagctgagattacaggcatcatgcctggctaatttttgtgtttttagtagagacgtggtttcaccacgttggccaggctggtctccaactcctgacctcaagagatccgcccgccttagcctcccaaagtgctgggattgcaggcgtgagccatcgcgcccggcctca >DA446942:1-566 (+) aattttgtaagaagctgccaaactgtcttccaaagtggttatactattttgcattcccaacatcgataaatgaacagtccattgctcaatatcctcaccagcatctggtggtgtcagtgttctggatttgggcattctaataggtatgtagtggtatctcacntttaatttgcatttctctgatgatatatgatgtggaacatttttaaatatgtttatttgccatctgtgtatctttggtgaggtgaggggttttggtccattttctagtcaggttggtttttttgcttttgagtcagtttcgctgttgcccagactgatgtgcagtggtgcaatctccactcactgcaacctctgcctcccgggttccagcgattcttctgcctcggcctcccgagtagctgagattacaggcatcatgcctggctaatttttgtgtttttagtagagacgtggtttcgccacgttggccaggctggtctccaactcctgacctcgagggatccgcccgccttggcctcccaaggtgctgggattgcaggcgtgagccatcgcgcccggcctca End editing Edited EST: DW435442, type: ag Aligns to: chr15:91527480-91527718 (-+) All mismatches: ag (49), ag (57), ag (58), ag (63), ag (94), ag (99), ag (100), ag (103), ag (112), ag (152), ag (187), gc (192), Editing mismatches: 11, all mismatches: 12, alignment length: 239, cluster length: 139, total number of As: 47 Locations in RNA: 49 57 58 63 94 99 100 103 112 152 187 Locations in genome: 91527686 91527678 91527677 91527672 91527641 91527636 91527635 91527632 91527623 91527583 91527548 Upstream nucleotide (in genome): c c a c t a a t t c a Upstream nucleotide summary: a: 4, c: 4, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g a g g c a a a g a g Downstream nucleotide summary: a: 5, c: 1, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 2, at: 0, ca: 2, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr15:91527480-91527718 (-) gggaggccgaggcgcatggattgcttgaggtcaggagttcaagaccagcctgatcaacatggtgaacctccgtctctactaaaaataaaaaaattagccgggcatggtggtgagcacctgtaatcccagctactcaagaggctgagacaggagaatctattgaacccggaaggtagaggttgcagtgagccgaaagcacgccattgcactccagcctgggcaacagagcgagactccat >DW435442:17-255 (+) gggaggccgaggcgcatggattgcttgaggtcgggagttcgggaccggcctgatcaacatggtgaacctccgtctctgctaaggatgaaaaaattggccgggcatggtggtgagcacctgtaatcccagctactcgagaggctgagacaggagaatctattgaacccggagggtacaggttgcagtgagccgaaagcacgccattgcactccagcctgggcaacagagcgagactccat End editing Edited EST: DW435736, type: ag Aligns to: chr15:50851426-50851663 (-+) All mismatches: ag (16), ag (17), ag (38), ag (39), ag (62), ag (101), ag (125), ag (132), ag (159), ag (168), tc (250), Editing mismatches: 10, all mismatches: 11, alignment length: 239, cluster length: 152, total number of As: 48 Locations in RNA: 16 17 38 39 62 101 125 132 159 168 Locations in genome: 50851663 50851662 50851641 50851640 50851617 50851578 50851555 50851548 50851521 50851512 Upstream nucleotide (in genome): n a c a c t c t t c Upstream nucleotide summary: a: 2, c: 4, g: 0, t: 3, other: 1 Downstream nucleotide (in genome): a t a g g t a g a c Downstream nucleotide summary: a: 4, c: 1, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 2, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 1, other: 1 >chr15:50851426-50851663 (-) aatcccagcacttcgggaggccaaggcaggtggatcacttgggctcaggagtttgagaccagcctgggcaacatggcaaaatcctatctctgct-aaaaaaaaaaatacaaaaattaggccaggtgcagtggctcatgcctgtaatcccagcactttgggaggccaaggtgggcggatcacaaggtcaggagttcgagaccagcctgaccaacatagtgaaaccccgtctctactaaaa >DW435736:16-254 (+) ggtcccagcacttcgggaggccggggcaggtggatcacttgggctcgggagtttgagaccagcctgngcaacatggcaaaatcctgtctctgctaaaaaaaaaaaatacgaaaattgggccaggtgcagtggctcatgcctgtgatcccagcgctttgggaggccaaggtgggcggatcacaaggtcaggagttcgagaccagcctgaccaacatagtgaaaccccgtctctaccaaaa End editing Edited EST: BX953894, type: ag Aligns to: chr15:33113599-33114105 (-+) All mismatches: at (101), ag (182), ag (183), ag (188), ag (234), ag (265), ag (280), ag (297), ag (315), ag (344), ag (356), ag (367), Editing mismatches: 11, all mismatches: 12, alignment length: 507, cluster length: 186, total number of As: 50 Locations in RNA: 182 183 188 234 265 280 297 315 344 356 367 Locations in genome: 33113924 33113923 33113918 33113872 33113841 33113826 33113809 33113791 33113762 33113750 33113739 Upstream nucleotide (in genome): t a c c c t c t g a t Upstream nucleotide summary: a: 2, c: 4, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): a t g a t c t g g c g Downstream nucleotide summary: a: 2, c: 2, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 1, ca: 1, cc: 0, cg: 1, ct: 2, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr15:33113599-33114105 (-) tgggatgaggcattggatgtgaccgtagaatttaggaggagaatgaaaggaaaagcaagcctcccttatattgttccaggttagggtattgagatataataagctgtagataaccttaaaatcacaggtataatgggtgttaagatttaagtattagccggatgtggtggctcatgcctgtaatcccagcactttgggaggctgaggcaggtggatcatgaggtcaggagttcaagaacagcctggccaagatggtgaaaccccatctctactaaaaatacaaaaattagctgggcatggtggcgggcgcctgtagtcccagctacttgggaggctggggcagagaattgcttgaacccgggaggtagaggttgcagtgagccgagattgtgccactgccctccagcctggggtgacagagcaagactccatctcaaaaaaaaaaaaaaaaaaaagatttaaatatttattagtcaaaaagttagaatttatcatgttcaaaccagt >BX953894:1-507 (+) tgggatgaggcattggatgtgaccgtagaatttaggaggagaatgaaaggaaaagcaagcctcccttatattgttccaggttagggtattgagatataattagctgtagataaccttaaaatcacaggtataatgggtgttaagatttaagtattagccggatgtggtggctcatgcctgtggtcccggcactttgggaggctgaggcaggtggatcatgaggtcaggagttcgagaacagcctggccaagatggtgaaaccccgtctctactaaaaatgcaaaaattagctgggcgtggtggcgggcgcctgtggtcccagctacttgggaggctggggcagggaattgcttgagcccgggaggtggaggttgcagtgagccgagattgtgccactgccctccagcctggggtgacagagcaagactccatctcaaaaaaaaaaaaaaaaaaaagatttaaatatttattagtcaaaaagttagaatttatcatgttcaaaccagt End editing Edited EST: AW674499, type: ga Aligns to: chr15:72511284-72511453 (-+) All mismatches: ga (124), ga (148), ga (158), ga (161), ga (166), ga (194), ga (195), ga (203), ga (212), ga (220), ga (221), Editing mismatches: 11, all mismatches: 11, alignment length: 170, cluster length: 98, total number of Gs: 22 Locations in RNA: 124 148 158 161 166 194 195 203 212 220 221 Locations in genome: 72511381 72511357 72511347 72511344 72511339 72511311 72511310 72511302 72511293 72511285 72511284 Upstream nucleotide (in genome): c g t c g c g g t t g Upstream nucleotide summary: a: 0, c: 3, g: 5, t: 3, other: 0 Downstream nucleotide (in genome): c a c c a g a c t g n Downstream nucleotide summary: a: 3, c: 4, g: 2, t: 1, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 2, cg: 1, ct: 0, ga: 3, gc: 1, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 1, other: 1 >chr15:72511284-72511453 (-) aggacctcagcagccatgtcgaagccccatagtgaagccgggactgccttcattcagacccagcagctgcacgcagccatggctgacacattcctggagcacatgtgccgcctggacattgattcaccacccatcacagcccggaacactggcatcatctgtaccattgg >AW674499:52-221 (+) aggacctcagcagccatgtcgaagccccatagtgaagccgggactgccttcattcagacccagcagctgcacacagccatggctgacacattcctgaagcacatgtaccacctgaacattgattcaccacccatcacagcccaaaacactgacatcatctataccattaa End editing Edited EST: BE222553, type: ag Aligns to: chr15:45542733-45543088 (-+) All mismatches: ag (37), ag (45), ag (53), ag (75), ag (88), ag (118), ag (130), ag (203), ag (214), ag (229), Editing mismatches: 10, all mismatches: 10, alignment length: 356, cluster length: 193, total number of As: 39 Locations in RNA: 37 45 53 75 88 118 130 203 214 229 Locations in genome: 45543052 45543044 45543036 45543014 45543001 45542971 45542959 45542886 45542875 45542860 Upstream nucleotide (in genome): t a t t c t c c c a Upstream nucleotide summary: a: 2, c: 4, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g t t a g g g g a g Downstream nucleotide summary: a: 2, c: 0, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 1, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 2, tt: 1, other: 0 >chr15:45542733-45543088 (-) tttccttagacaaggtcttgctctgtcacccagactagagtgcaatggcactatcatggctcattgcagcctctaacttctgggctcaggtgatcctcccatctcagcctctggagtagctgggaccacaggcgtgtaccaccacacctggctaagtctttttttaattttctgtggggataggggtctcaatatgttgcccagtctggtctcaaactcctgggctcaagccatcctcctgccttggcctctcaaagtactgggattatgggtgtgagccactgctcctggccaggttctctatcttgttcttcactgtatccctaggctcaaggcccaccacaatattattaggc >BE222553:1-356 (+) tttccttagacaaggtcttgctctgtcacccagactggagtgcagtggcactgtcatggctcattgcagcctctgacttctgggctcgggtgatcctcccatctcagcctctggagtggctgggaccacgggcgtgtaccaccacacctggctaagtctttttttaattttctgtggggataggggtctcaatatgttgcccggtctggtctcgaactcctgggctcaggccatcctcctgccttggcctctcaaagtactgggattatgggtgtgagccactgctcctggccaggttctctatcttgttcttcactgtatccctaggctcaaggcccaccacaatattattaggc End editing Edited EST: T07164, type: ag Aligns to: chr16:66541050-66541335 (-+) All mismatches: ag (107), ag (120), ag (166), ag (168), ag (204), ag (236), Editing mismatches: 6, all mismatches: 6, alignment length: 285, cluster length: 130, total number of As: 24 Locations in RNA: 107 120 166 168 204 236 Locations in genome: 66541228 66541215 66541169 66541167 66541131 66541099 Upstream nucleotide (in genome): a c t c c a Upstream nucleotide summary: a: 2, c: 3, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): g g c g g g Downstream nucleotide summary: a: 0, c: 1, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr16:66541050-66541335 (-) gacacttctttgaaatatctttttattttatttatttatttttttgagacagggtctcgccctgtcacccaggctggagtgcagtggtgtgatcttggctcactgcaagctccacctcccaggctcaagtgattctcgtgcctcagcctcctgagtagctgggattacaggtgtgtgccactacgcctggctaatagtagagacagggtttccccagtttggcctggctgctctcaagtgatatgcccaccttggtctcccaaagtactgggattagtgaaccgct >T07164:1-285 (+) gacacttctttgaaatatc-tttnattttatttatttatttttttnagacagggtctcgccctgtnacccaggctggagtgcagtggtgtnatcttggctcactgcaggctccacctcccgggctcaagtnattctngtgcctcancctcctgagtagctgggattgcgggtgtgtgccactacgcctggctaatagtagagacggggtttccccagtttggcctggctgctctcaggtgatatgcccaccttggtctcccaaagtnctgggattagtgaaccgct End editing Edited EST: R45368, type: ag Aligns to: chr16:14430010-14430294 (-+) All mismatches: ag (23), ag (57), ag (62), ag (75), ag (94), ag (113), ag (126), ag (130), ag (140), ag (142), ag (227), Editing mismatches: 11, all mismatches: 11, alignment length: 286, cluster length: 205, total number of As: 45 Locations in RNA: 23 57 62 75 94 113 126 130 140 142 227 Locations in genome: 14430272 14430238 14430233 14430220 14430201 14430182 14430169 14430165 14430155 14430153 14430068 Upstream nucleotide (in genome): a a c c c c c t t c a Upstream nucleotide summary: a: 3, c: 6, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g t t c t c a g c g g Downstream nucleotide summary: a: 1, c: 3, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 1, ca: 1, cc: 2, cg: 1, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr16:14430010-14430294 (-) ttttttttttttttttttcagaaggagtctcactctgtcacccaggctggagtgcaatggcatggtttcggctcactgcaacacctgcctcccatgtttaagtcattctcccacctcagcctctcaagtagctgggactacaggcgcgtgccaccacacccagctaatttttgtatttttagtagagacagggttatattatgggaggcccacctcggcctcccaaagtgctgggattacaggagtgagccaccgtgcccggctggtacctgg-tttctagttagc >R45368:1-286 (+) ttttttttttttttttttcagagggagtctcactctgtcacccaggntggagtgcagtggcgtggtttcggctcgctgcaacacctgcctcccgtgtttaagtcattctcccgcctcagcctntcgagtggctgggactgcgggcgcgtgccaccacacccagctaatttttgtatttttagtagagacagggttatattatgggaggcccacctcggcctcccaaggtgctgggattacaggantgagccaccgtgcccggctggtacctgggtttctagttagc End editing Edited EST: H83846, type: ag Aligns to: chr16:21873030-21873340 (-+) All mismatches: ag (20), ag (30), ta (31), ag (35), ag (46), ag (94), ag (104), ag (120), ag (138), ag (146), ag (171), ag (175), Editing mismatches: 11, all mismatches: 12, alignment length: 311, cluster length: 156, total number of As: 29 Locations in RNA: 20 30 35 46 94 104 120 138 146 171 175 Locations in genome: 21873321 21873312 21873307 21873296 21873247 21873237 21873221 21873203 21873195 21873170 21873166 Upstream nucleotide (in genome): c a c a t t c t t t c Upstream nucleotide summary: a: 2, c: 4, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): g t g g g c c t g g g Downstream nucleotide summary: a: 0, c: 2, g: 7, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 0, cc: 1, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 3, tt: 1, other: 0 >chr16:21873030-21873340 (-) gtcgcccaggctggagtgcagtggcgc-aatctcagctcactgcaagctctgcctcccgggttcacgccattcttctgcctcagcctcccgagtagctgggactacaggcgcccaccgccacgcccggctaattttttatatttttagtagagatggggttttactatgttagccaggatggtctcgatctcttgaccttgtgatctacccgccttggcctcccaaagtgaaacttttctttaaaatagagatgggatcttgctgtattgcccaggctggtctcagactccttgccttaagcagtcctccca >H83846:1-311 (+) gtcgcccaggctggagtgcggtggcgcgagactcggctcactgcaggctct-nctcccgggtncacgccattcttctncctcagcctcccgagtggctgggactgcaggcgcccaccgccgcgcccggctaattttttgtatttttggtagagatggggttttactatgttggccgggatggtctcgatctcttgaccttgtgatctacccgccttggcctcccaaagtgaaacttttctttaaaatagagatgggatcttgctgtattgcccaggctggtctcagactccttgccttaagcagtcctccca End editing Edited EST: CN263448, type: ag Aligns to: chr16:10603951-10604195 (-+) All mismatches: ag (223), ag (232), ag (270), ag (282), ag (292), ag (367), ag (382), ag (385), ag (386), ag (409), Editing mismatches: 10, all mismatches: 10, alignment length: 245, cluster length: 187, total number of As: 39 Locations in RNA: 223 232 270 282 292 367 382 385 386 409 Locations in genome: 10604167 10604158 10604120 10604108 10604098 10604023 10604008 10604005 10604004 10603981 Upstream nucleotide (in genome): t g c t t c a c a a Upstream nucleotide summary: a: 3, c: 3, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g g g g c a g a t a Downstream nucleotide summary: a: 3, c: 1, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 1, ca: 2, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr16:10603951-10604195 (-) aggctggagtacagtgtggtatgatcatagctcatggagcctcaatctcctggacttaggtgatcctcccaactcagcctcctgagtagctgggactacaggtgtgggccaccatgcctggctaatttttattttttttttagaaatggagtctcgctatattgctggtctcaaactcctgggcacaagcaatcctcctgccttggcctcccaaaatgctgtgattacagcaggcatgagccacc >CN263448:195-439 (+) aggctggagtacagtgtggtatgatcatggctcatggggcctcaatctcctggacttaggtgatcctcccaactcggcctcctgagtggctgggactgcaggtgtgggccaccatgcctggctaatttttattttttttttagaaatggagtctcgctatattgctggtctcgaactcctgggcacaggcggtcctcctgccttggcctcccaagatgctgtgattacagcaggcatgagccacc End editing Edited EST: DW417333, type: ag Aligns to: chr16:75464370-75464622 (-+) All mismatches: ag (16), ag (24), ag (57), ag (72), ag (87), ag (137), ag (138), ag (147), ag (182), ag (183), ag (212), ga (267), Editing mismatches: 11, all mismatches: 12, alignment length: 252, cluster length: 198, total number of As: 52 Locations in RNA: 16 24 57 72 87 137 138 147 182 183 212 Locations in genome: 75464622 75464614 75464581 75464565 75464550 75464500 75464499 75464490 75464455 75464454 75464425 Upstream nucleotide (in genome): n c c a c t a t c a c Upstream nucleotide summary: a: 3, c: 5, g: 0, t: 2, other: 1 Downstream nucleotide (in genome): g g a c t a t c a g t Downstream nucleotide summary: a: 3, c: 2, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 1, ca: 2, cc: 0, cg: 1, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 1 >chr16:75464370-75464622 (-) agggaggcagaggctggtggatcatttgaggtcaggagttcaagaccagcctggccaacgtggtgtaaccccatctctactgaaaatatgaaaattagccaagtgtggtgacgggcgcctgtaatcctatctactggggaggctgaggcacgagatctcttgaacccaagaggtgggggttgcagtgagtgaagatcatgcttctgcactccagcctgggtaacagagcaagactccatttaaaaaaaaaaag >DW417333:16-267 (+) ggggaggcggaggctggtggatcatttgaggtcaggagttcgagaccagcct-gccagcgtggtgtaaccccgtctctactgaaaatatgaaaattagccaagtgtggtgacgggcgcctgtggtcctatctgctggggaggctgaggcacgagatctcttgaacccgggaggtgggggttgcagtgagtgaagatcgtgcttctgcactccagcctgggtaacagagcaagactccatttaaaaaaaaaaaa End editing Edited EST: DW417963, type: ag Aligns to: chr16:18786784-18787068 (-+) All mismatches: ag (148), ag (152), ag (157), ag (160), ag (253), ag (266), ag (278), Editing mismatches: 7, all mismatches: 7, alignment length: 285, cluster length: 131, total number of As: 34 Locations in RNA: 148 152 157 160 253 266 278 Locations in genome: 18786937 18786933 18786928 18786925 18786832 18786819 18786807 Upstream nucleotide (in genome): a t a c c c c Upstream nucleotide summary: a: 2, c: 4, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): a g g t c g g Downstream nucleotide summary: a: 1, c: 1, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 0, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 0 >chr16:18786784-18787068 (-) gggtgggcgcagtggctcacgcctgtaatcctaccactttgggaggctgaggtggacagatcacttgagcccaggagttcgagatcagcttgggcaacgtgatgaaatacgatctctacaaaaaatacaaaaattagccaagcatagaggtacacacctgtagtcccagatactccactgaggtgggaggatcacctgagcctggagaggttgagggttcagtgaggtgcgatcgcaccaatgcactccagcctgggcgacagagtgagatactgtctcaaaaaa >DW417963:17-301 (+) gggtgggcgcagtggctcacgcctgtaatcctaccactttgggaggctgaggtggacagatcacttgagcccaggagttcgagatcagcttgggcaacgtgatgaaatacgatctctacaaaaaatacaaagattggccaggcgtagaggtacacacctgtagtcccagatactccactgaggtgggaggatcacctgagcctggagaggttgagggttcagtgaggtgcgatcgcgccaatgcactccggcctgggcgacggagtgagatactgtctcaaaaaa End editing Edited EST: DW428088, type: ag Aligns to: chr16:260838-261058 (-+) All mismatches: ag (122), ag (134), ag (189), ag (203), ag (213), ag (232), ag (254), Editing mismatches: 7, all mismatches: 7, alignment length: 221, cluster length: 133, total number of As: 22 Locations in RNA: 122 134 189 203 213 232 254 Locations in genome: 260993 260981 260926 260912 260902 260883 260861 Upstream nucleotide (in genome): c t t c t t t Upstream nucleotide summary: a: 0, c: 2, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): c c g c a g g Downstream nucleotide summary: a: 1, c: 3, g: 3, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 2, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 3, tt: 0, other: 0 >chr16:260838-261058 (-) tttttttgagacggagtgttgccctgtcacccaggctggagtgcagtggcacacagtctctgctcactgcaagctctacctcccgggttcatgccattgtcctgcctcagcctcccgggtacctgggactataggcgcccgccaccacgcccggctaattttttgtatttttagtagagacggggtttcactgtgttagccagggtggtctcgatctcctg >DW428088:57-277 (+) tttttttgagacggagtgttgccctgtcacccaggctggagtgcagtggcacacagtctctgctcgctgcaagctctgcctcccgggttcatgccattgtcctgcctcagcctcccgggtacctgggactatgggcgcccgccaccgcgcccggctgattttttgtatttttagtggagacggggtttcactgtgttggccagggtggtctcgatctcctg End editing Edited EST: BE147096, type: ag Aligns to: chr16:11795095-11795586 (-+) All mismatches: at (288), ag (317), ag (324), ag (392), ag (403), ag (423), ag (425), ag (426), ag (427), ag (458), ag (459), Editing mismatches: 10, all mismatches: 11, alignment length: 492, cluster length: 143, total number of As: 39 Locations in RNA: 317 324 392 403 423 425 426 427 458 459 Locations in genome: 11795272 11795265 11795197 11795186 11795166 11795164 11795163 11795162 11795131 11795130 Upstream nucleotide (in genome): c a c a t c a a t a Upstream nucleotide summary: a: 5, c: 3, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): c t a c c a a a a t Downstream nucleotide summary: a: 5, c: 3, g: 0, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 2, ca: 2, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr16:11795095-11795586 (-) atttgagggtcaaaagtagtcttttgttttaatttgcttccttttgggatagtgaggttgagtttatttccagtaattattagccatgtatacatatttccttttctgtggtttgtccatgttaacaattttccttgttgatttgtataagtctttatatatgctagatttgttcatttaataaatattttttgacctcttaactatacaccccggcacttctgtaggtgctgggatactagcatgaaacaaagtctctaatttcacagaaattacagtcagaagaggaaattgggccgagtgtggtggctcacacctgtaattctggcactttgggaggcagaggcaggcacatcacttgaggtcaggagttcgagactgccctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagctgggtgtggtggcacacgcctgtaattgcagctacttgggaggctgaagcaggagaattg >BE147096:3-494 (+) atttgagggtcaaaagtagtcttttgttttaatttgcttccttttgggatagtgaggttgagtttatttccagtaattattagccatgtatacatatttccttttctgtggtttgtccatgttaacaattttccttgttgatttgtataagtctttatatatgctagatttgttcatttaataaatattttttgacctcttaactatacaccccggcacttctgtaggtgctgggatactagcatgaaacaaagtctctaatttcacagaaattacagtcagaagtggaaattgggccgagtgtggtggctcacgcctgtagttctggcactttgggaggcagaggcaggcacatcacttgaggtcaggagttcgagactgccctggccgacatggtgaagccccgtctctactaaaaatgcgggaattagctgggtgtggtggcacacgcctgtggttgcagctacttgggaggctgaagcaggagaattg End editing Edited EST: T55084, type: ag Aligns to: chr17:63683311-63683581 (-+) All mismatches: ag (125), ag (130), ag (150), ag (158), ag (174), Editing mismatches: 5, all mismatches: 5, alignment length: 274, cluster length: 50, total number of As: 13 Locations in RNA: 125 130 150 158 174 Locations in genome: 63683458 63683453 63683433 63683425 63683409 Upstream nucleotide (in genome): t a c t c Upstream nucleotide summary: a: 1, c: 2, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): c a g t g Downstream nucleotide summary: a: 1, c: 1, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 1, other: 0 >chr17:63683311-63683581 (-) ccgggcgcagtggctcacacc-tgtaatcccaacacttagggaggccaaggtgggcggatcaacgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctcctaaaaatacaaaaattagctgggcgtggtggcaggtgcctatagtcctagctactcaggaggctgaggcaggagaattgcttgaactggggaggcggaggttgcagtgagccgagatcacgccactgcgct-ccagcct-aggagacagagcaagac >T55084:1-274 (+) ccgggcgcagtggctcacaccntgtaatcccaacacttagggaggccaaggtgggcggatcaacgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctcctaaaaatgcaaagattagctgggcgtggtggcgggtgcctgtagtcctagctactcgggaggctgaggcaggagaattgcttgaactggggaggcggaggttgcagtgagccgagatcacgccactgcgcttccagccttaggagacagagcaagac End editing Edited EST: DA267926, type: ag Aligns to: chr17:45906894-45907456 (-+) All mismatches: tc (169), ag (198), ag (248), ag (284), ag (285), ag (288), ag (314), ag (324), ag (382), ag (394), ag (420), ag (459), Editing mismatches: 11, all mismatches: 12, alignment length: 563, cluster length: 262, total number of As: 51 Locations in RNA: 198 248 284 285 288 314 324 382 394 420 459 Locations in genome: 45907259 45907209 45907173 45907172 45907169 45907143 45907133 45907075 45907063 45907037 45906998 Upstream nucleotide (in genome): g c c a c t t c c a t Upstream nucleotide summary: a: 2, c: 5, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g a a g a g c c g g c Downstream nucleotide summary: a: 3, c: 3, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 3, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 2, tg: 1, tt: 0, other: 0 >chr17:45906894-45907456 (-) agcatcaccaggagggcttgttagaacactatttgtgacccgtcttggtaacatagtgaaacctggtctctacaaaacaaaacaaacaaaaaacactatttgctaggctccaccccagaattgctgattcagtaggtctaggcagggcctgagaatttatgtttatttttctttctttctttctttttttttttttgagacagtcttgctctgtcacccaggccggagtgccggagtgcaatggcacaatctcggctcactgcaacctctgcctcttgggttcaagcaattctcatggctcagccacctgagtagctgggactacaggtgtgtgccaccacgcctggctaatttttgtagtttagttagagacggggtttcaccatgttggccaggttggtcttgaattcctgacctcaagtgagctgcccaccttggcctcccaaagtgttgggattacaggcgtgagccaccacacccagcaaaatttctaacaagctctcaaatgatgctgatgttgctggttggggtggaggtggggcataccttgagagccactagat >DA267926:1-563 (+) agcatcaccaggagggcttgttagaacactatttgtgacccgtcttggtaacatagtgaaacctggtctctacaaaacaaaacaaacaaaaaacactatttgctaggctccaccccagaattgctgattcagtaggtctaggcagggcctgagaatttatgtttatttctctttctttctttctttttttttttttgggacagtcttgctctgtcacccaggccggagtgccggagtgcaatggcacgatctcggctcactgcaacctctgcctcttgggttcgggcgattctcatggctcagccacctgagtggctgggactgcaggtgtgtgccaccacgcctggctaatttttgtagtttagttanagacggggtttcgccatgttggccgggttggtcttgaattcctgacctcaggtgagctgcccaccttggcctcccaaagtgttgggattgcaggcgtgagccaccacacccagcaaaatttctaacaagctctcaaatgatgctgatgttgctggttggggtggaggtggggcataccttgagagccactagat End editing Edited EST: DA235666, type: ag Aligns to: chr17:4580699-4581284 (-+) All mismatches: ag (106), ag (156), ag (169), ag (170), ag (173), ag (183), ag (196), ag (201), ag (225), ag (228), ag (245), tg (454), Editing mismatches: 11, all mismatches: 12, alignment length: 588, cluster length: 140, total number of As: 28 Locations in RNA: 106 156 169 170 173 183 196 201 225 228 245 Locations in genome: 4581180 4581130 4581117 4581116 4581113 4581103 4581090 4581085 4581061 4581058 4581041 Upstream nucleotide (in genome): t c c a t t c c t t c Upstream nucleotide summary: a: 1, c: 5, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): g c a g g c c c g g t Downstream nucleotide summary: a: 1, c: 4, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 1, cc: 3, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 4, tt: 0, other: 0 >chr17:4580699-4581284 (-) ctcacctcagcctcccaaagtgctgggattacaggtatgagccaccgtgcctggcc-tttttttttttctttttgagacagggtctcactctcatcacccaggctagagtacactgactggcatgatctcggttctgggcttgggtggtcctcccacctcagcctcccaagtagctgggactacaggcatgcgccaccacacccggctaagtttttgtatttttagtagagatagggtttctccatgttgcccagactggtctcaaactccttggctcaagtgatccgcctgccttgacctcccaaagtgcctggattacaggcgtgagctactgcacccagcctgtgcttttttattgacatgttaagtaataagatctagaagcaggtcttacaacgactataattgcaaattagtgatgcatgtgaatgatatttcaggatgtgttacaattataatgtgacatgaaaatgattctattagtgacagtcacaggtactgctgatactactgtggctatttgtctgcatttataagtgaaggaaacactacattttacaaataggctagtgggagtaa-ttttttt >DA235666:1-588 (+) ctcacctcagcctcccaaagtgctgggattacaggtatgagccaccgtgcctggccttttttttttttctttttgagacagggtctcactctcatcacccaggctggagtacactgactggcatgatctcggttctgggcttgggtggtcctcccgcctcagcctcccgggtggctgggactgcaggcatgcgccgccacgcccggctaagtttttgtatttttggtggagatagggtttctccgtgttgcccagactggtctcaaactccttggctcaagtgatccgcctgccttgacctcccaaagtgcctggattacaggcgtgagctactgcacccagcctgtgcttttttattgacatgttaagtaataagatctagaagcaggtcttacaacgactataattgcaaattagtgatgcatgtgaatgatatttcaggatgtgttacaagtataatgtgacatgaaaatgattctattagtgacagtcacaggtactgctgatactactgtggctatttgtctgcatttataagtgaaggaaacactacattttacaaataggctagtgggagtaaattttttt End editing Edited EST: BU727892, type: ag Aligns to: chr17:17735958-17736254 (-+) All mismatches: ag (117), ag (129), ag (185), ag (207), ag (239), ag (261), ag (262), ag (274), Editing mismatches: 8, all mismatches: 8, alignment length: 294, cluster length: 158, total number of As: 28 Locations in RNA: 117 129 185 207 239 261 262 274 Locations in genome: 17736135 17736123 17736067 17736045 17736013 17735991 17735990 17735978 Upstream nucleotide (in genome): c t t t g a a t Upstream nucleotide summary: a: 2, c: 1, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g g g g t a g c Downstream nucleotide summary: a: 1, c: 1, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr17:17735958-17736254 (-) ttttttgtttgtttgtttttgagacagagtcttgctctgtcacccaggctggagtgcagtggcgcgatctcggctcactgcaaactccgcctcccgggttcacaccattctcctgcctcagcctcccgagtagcttgggactataggtgcgtgccaccatgcctggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcatgatctgcccgcctcggcctcccaaagtgctgggattacaggcgtgagccactgtgcc >BU727892:1-294 (+) tttttt-ttt-ttt-tttttgagacagagtcttgctctgtcacccaggctggagtgcagtggcgcgatctcggctcactgcaaactccgcctcccgggttcacaccattctcctgcctcggcctcccgagtggcttgggactataggtgcgtgccaccatgcctggctaattttttgtatttttagtggagacggggtttcaccgtgttggccaggatggtctcgatctcctgacctcatggtctgcccgcctcggcctcccagggtgctgggattgcaggcgtgagccactgtgcc End editing Edited EST: BF185701, type: ga Aligns to: chr17:8123204-8123532 (-+) All mismatches: ga (302), ga (306), ga (312), ga (318), ga (322), ga (326), Editing mismatches: 6, all mismatches: 6, alignment length: 329, cluster length: 25, total number of Gs: 6 Locations in RNA: 302 306 312 318 322 326 Locations in genome: 8123231 8123227 8123221 8123215 8123211 8123207 Upstream nucleotide (in genome): a a a a a a Upstream nucleotide summary: a: 6, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a a Downstream nucleotide summary: a: 6, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 6, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr17:8123204-8123532 (-) gggatgggatggctcacgcctgtaatcccagcacttagggaggcccaggcgggcagatcacgaagtcaagagatcaagaccatcctggccaacttggtgaaaccccgtctctactaaaaactacaaaaatcagctgggcgtggtggcgcatgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaaccccggaggcagaggttgcagtgagcggagattggcaccactacactccagcctggcgacagagggacactctctctcaaaaaaaaaaaaaaaaaaagaa-agaaagaaaaagaaaaagaaagaaagaaa >BF185701:1-329 (+) gggatgggatggctcacgcctgtaatcccagcacttagggaggcccaggcgggcagatcacgaagtcaagagatcaagaccatcctggccaacttggtgaaaccccgtctctactaaaaactacaaaaatcagctgggcgtggtggcgcatgcctgtagtcccagctacttgggaggctgaggcaggagaatcgcttgaaccccggaggcagaggttgcagtgagcggagat-ggcaccactacactccagcctggcgacagagggacactctctctcaaaaaaaaaaaaaaaaaaagaataaaaaaaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: T08966, type: ag Aligns to: chr18:21194143-21194515 (-+) All mismatches: ag (207), ag (209), ag (216), ag (237), ag (251), ag (294), ag (295), ag (353), ag (358), ag (366), ag (369), ga (370), Editing mismatches: 11, all mismatches: 12, alignment length: 374, cluster length: 161, total number of As: 49 Locations in RNA: 207 209 216 237 251 294 295 353 358 366 369 Locations in genome: 21194307 21194305 21194298 21194277 21194263 21194220 21194219 21194163 21194158 21194150 21194147 Upstream nucleotide (in genome): c c a c c a a a c c g Upstream nucleotide summary: a: 4, c: 6, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): c c t a c a c t g g g Downstream nucleotide summary: a: 2, c: 4, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 2, ca: 1, cc: 3, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr18:21194143-21194515 (-) ccactgtgtctggcctgccatgagctttagaagccagaaagctgcacttgttaaaattgtttgtaaagtaagaataaaccatctatgaaaatgaattctatgaacaaaaggaataagctttagaaagcttggactttgcaaaatatagtcttgtttcaaacagctcttttttggctttttaaaaactcctggtctggtgtggtggctcacacctgtaatcctagctctttgggaggccaaggtgggcgaatcacctgagattaggagttcaagaccagcttggccaatgtggtgaaaccccgtctctactaaaaatacaaaaataagccaagagtgg-tggtgtacacct-gtaatcccagctactcaggag-ttt >T08966:1-374 (+) ccactgtgtctggcctgccatgagctttagaagccagaaagctgcacttgttaaaattgtttgtaaagtaagaataaaccatctatgaaaatgaattctatgaacaaaaggaataagctttagaaagcttggactttgcaaaatatagtcttgtttcaaacagctcttttttggctttttaaa--ctcctggnctggtgtggtggctcgcgcctgtagtcctagctctttgggaggccgaggtgggcgaatcgcctnagattaggagttcaagaccagcttggccaatntggtgaggccccgtctctactaaaantacaaaaataagccaagagtgggtggtgtacacctcgtagtnccggctactcggggagttt End editing Edited EST: DB571541, type: ag Aligns to: chr18:9313051-9313526 (-+) All mismatches: ag (158), ag (227), ag (231), ag (256), ag (260), ag (266), ag (293), ag (312), ag (315), ag (318), ag (322), Editing mismatches: 11, all mismatches: 11, alignment length: 476, cluster length: 165, total number of As: 38 Locations in RNA: 158 227 231 256 260 266 293 312 315 318 322 Locations in genome: 9313369 9313300 9313296 9313271 9313267 9313261 9313234 9313215 9313212 9313209 9313205 Upstream nucleotide (in genome): c a a t c t a t t a g Upstream nucleotide summary: a: 4, c: 2, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): c g t g g c t g g a g Downstream nucleotide summary: a: 1, c: 2, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 2, ca: 0, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr18:9313051-9313526 (-) ccaagacttcctatcatatagaaatacaattgatttttgtatattgacatttttgtatattggtttttgtatcctgtaactctgctaaactcagttattagttctggtagcttttttggtggatttcttaggatttttttttttgagatggagtctcactctgttacccaggcttgagtgcagtggcatgatcttggctcactgcaacttccacctcccaggttcaagcaattctcctgcatcagcatcccgagtagccaggactacaggtgcatgccaccacccccagctaatttttgtattttttttttagtagaaatgaggtttcgccatgttggccaggctgacatcagctgaaccactttggcctcccaacgtgctcagattacaggtgtcagccactgcgcccagccaatttcttgggattttctatataagagacctgtcatctttgaataaagataattttattcttc >DB571541:1-476 (+) ccaagacttcctatcatatagaaatacaattgatttttgtatattgacatttttgtatattggtttttgtatcctgtaactctgctaaactcagttattagttctggtagcttttttggtggatttcttaggatttttttttttgagatggagtctcgctctgttacccaggcttgagtgcagtggcatgatcttggctcactgcaacttccacctcccaggttcaggcagttctcctgcatcagcatcccgagtggccgggactgcaggtgcatgccaccacccccagctagtttttgtattttttttttggtggagatggggtttcgccatgttggccaggctgacatcagctgaaccactttggcctcccaacgtgctcagattacaggtgtcagccactgcgcccagccaatttcttgggattttctatataagagacctgtcatctttgaataaagataattttattcttc End editing Edited EST: DB566733, type: ag Aligns to: chr18:9313051-9313523 (-+) All mismatches: ag (156), ag (225), ag (229), ag (254), ag (258), ag (264), ag (291), ag (310), ag (313), ag (316), ag (320), Editing mismatches: 11, all mismatches: 11, alignment length: 473, cluster length: 165, total number of As: 38 Locations in RNA: 156 225 229 254 258 264 291 310 313 316 320 Locations in genome: 9313369 9313300 9313296 9313271 9313267 9313261 9313234 9313215 9313212 9313209 9313205 Upstream nucleotide (in genome): c a a t c t a t t a g Upstream nucleotide summary: a: 4, c: 2, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): c g t g g c t g g a g Downstream nucleotide summary: a: 1, c: 2, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 2, ca: 0, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr18:9313051-9313523 (-) agacttcctatcatatagaaatacaattgatttttgtatattgacatttttgtatattggtttttgtatcctgtaactctgctaaactcagttattagttctggtagcttttttggtggatttcttaggatttttttttttgagatggagtctcactctgttacccaggcttgagtgcagtggcatgatcttggctcactgcaacttccacctcccaggttcaagcaattctcctgcatcagcatcccgagtagccaggactacaggtgcatgccaccacccccagctaatttttgtattttttttttagtagaaatgaggtttcgccatgttggccaggctgacatcagctgaaccactttggcctcccaacgtgctcagattacaggtgtcagccactgcgcccagccaatttcttgggattttctatataagagacctgtcatctttgaataaagataattttattcttc >DB566733:2-474 (+) agacttcctatcatatagaaatacaattgatttttgtatattgacatttttgtatattggtttttgtatcctgtaactctgctaaactcagttattagttctggtagcttttttggtggatttcttaggatttttttttttgagatggagtctcgctctgttacccaggcttgagtgcagtggcatgatcttggctcactgcaacttccacctcccaggttcaggcagttctcctgcatcagcatcccgagtggccgggactgcaggtgcatgccaccacccccagctagtttttgtattttttttttggtggagatggggtttcgccatgttggccaggctgacatcagctgaaccactttggcctcccaacgtgctcagattacaggtgtcagccactgcgcccagccaatttcttgggattttctatataagagacctgtcatctttgaataaagataattttattcttc End editing Edited EST: BQ279242, type: ga Aligns to: chr18:61034565-61034764 (-+) All mismatches: ga (188), ga (190), ga (191), ga (193), ga (198), ga (199), ga (201), Editing mismatches: 7, all mismatches: 7, alignment length: 201, cluster length: 13, total number of Gs: 9 Locations in RNA: 188 190 191 193 198 199 201 Locations in genome: 61034577 61034574 61034573 61034571 61034568 61034567 61034565 Upstream nucleotide (in genome): c t g c t g c Upstream nucleotide summary: a: 0, c: 3, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): g g c g g c n Downstream nucleotide summary: a: 0, c: 2, g: 4, t: 0, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 2, gg: 0, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 1 >chr18:61034565-61034764 (-) cgagtcttcgcagcccttcccggcgcgctcgcatctggcgctgtccggagcccgctcgcgacgcacagggacgggaggcccggtttccacgggagaggctgcggactgcgggccccgtcccgaggccgggggagtgggagacacccggcgacccccgagaggcgattctggcagtggtggcggtggcggtggcg-g-tggcg >BQ279242:1-201 (+) cgagtcttcgcagcccttcccggcgcgctcgcatctggcgctgtccggagcccgctcgcgacgcacagggacgggaggcccggtttccacgggagaggctgcggactgcgggccccgtcccgaggccgggggagtgggagacacccggcgacccccgagaggcgattctggcagtggtggcggtggcag-aacacgctaaca End editing Edited EST: T07870, type: ag Aligns to: chr19:35098971-35099272 (-+) All mismatches: ag (256), ag (257), ag (282), ag (292), ag (302), Editing mismatches: 5, all mismatches: 5, alignment length: 303, cluster length: 46, total number of As: 20 Locations in RNA: 256 257 282 292 302 Locations in genome: 35099017 35099016 35098991 35098982 35098972 Upstream nucleotide (in genome): g a g a g Upstream nucleotide summary: a: 2, c: 0, g: 3, t: 0, other: 0 Downstream nucleotide (in genome): a t t t a Downstream nucleotide summary: a: 2, c: 0, g: 0, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 0, ct: 0, ga: 2, gc: 0, gg: 0, gt: 1, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr19:35098971-35099272 (-) gtgagcataattaacaatttattgttaaattactgataagtctagtaatgttgcaggatacaaaatatacatacaaaagttggagacatttatatacattgataatgaactatccaaaaaagaaaataagaaggcaattacatttccagtaacaacaaaaagaataaaatgcttgaaaataaacttagccaaagaggtgtaatacttgcacactgaaaactataaaacacgatgaggaaaattaagacacaactgaataaaatgacttcatactttcatggattt-aaagaatgaatattgaa >T07870:1-303 (+) gtgagcataattaacaatttattgttaaattactgataagtctagtaatgttgcaggatacaaaatatacatacaaaagttggagacatttatatacattgataatgaactatccaaaaaagaanataaganggcaattacatttccagtaacaacaaaaagaataaaatgcttgaaaataaacttagccaaagaggtgtaatacttgcacactgaaaactataaaacacgatgaggaaaattangacacaactgggtaaantgncttcatactttcatgggttttaaagagtgantattgga End editing Edited EST: BG169269, type: ga Aligns to: chr19:14198651-14198813 (-+) All mismatches: ga (147), ga (153), ga (154), ga (155), ga (164), Editing mismatches: 5, all mismatches: 5, alignment length: 163, cluster length: 18, total number of Gs: 5 Locations in RNA: 147 153 154 155 164 Locations in genome: 14198668 14198662 14198661 14198660 14198651 Upstream nucleotide (in genome): a a g g a Upstream nucleotide summary: a: 3, c: 0, g: 2, t: 0, other: 0 Downstream nucleotide (in genome): a g g a n Downstream nucleotide summary: a: 2, c: 0, g: 2, t: 0, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr19:14198651-14198813 (-) ctccagcccctaggggactagctgggttggggttcctcgggccttttctctcctccctcttttctttctgttgattgtcgctccagctggctgtattgctttttaatattgcaccgaaggttttttaaataaaattttaaaaaaagaaaaagggaaaaaaaag >BG169269:2-164 (+) ctccagcccctaggggactagctgggttggggttcctcgggccttttctctcctccctcttttctttctgttgattgtcgctccagctggctgtattgctttttaatattgcaccgaaggttttttaaataaaattttaaaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: BG284818, type: ag Aligns to: chr19:23441251-23441546 (-+) All mismatches: ag (167), ag (204), ag (243), ag (245), ag (248), Editing mismatches: 5, all mismatches: 5, alignment length: 296, cluster length: 82, total number of As: 24 Locations in RNA: 167 204 243 245 248 Locations in genome: 23441380 23441343 23441304 23441302 23441299 Upstream nucleotide (in genome): t g a a t Upstream nucleotide summary: a: 2, c: 0, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g g a a c Downstream nucleotide summary: a: 2, c: 1, g: 2, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr19:23441251-23441546 (-) ctcagcacccaggtgatgtgactctgctgcctgtgtgctgctttcaggagaaggttgtaacttattcctggctgagtatgcagtcacactcctgactgatctctgccctcagaaaaggttgtgtcaagccgggcccggtggctcatgccagtaatccccagcacttagggagaccgaggtgggtggatcgcctgaggagtttgagaccagatggccaacatggtgaaaccccgtctctactaaaaatacaaaaattaatcgggtgtggtggcgggcacctgtaaactcagctattc >BG284818:1-296 (+) ctcagcacccaggtgatgtgactctgctgcctgtgtgctgctttcaggagaaggttgtaacttattcctggctgagtatgcagtcacactcctgactgatctctgccctcagaaaaggttgtgtcaagccgggcccggtggctcatgccagtaatccccagcacttggggagaccgaggtgggtggatcgcctgaggagtttgggaccagatggccaacatggtgaaaccccgtctctactagagatgcaaaaattaatcgggtgtggtggcgggcacctgtaaactcagctattc End editing Edited EST: DW414331, type: ag Aligns to: chr1:46760558-46760856 (-+) All mismatches: ag (25), ag (39), ag (44), ag (53), ag (65), ag (69), ag (81), ag (94), ag (106), Editing mismatches: 9, all mismatches: 9, alignment length: 300, cluster length: 82, total number of As: 22 Locations in RNA: 25 39 44 53 65 69 81 94 106 Locations in genome: 46760848 46760834 46760829 46760820 46760808 46760804 46760792 46760779 46760767 Upstream nucleotide (in genome): c c g a c g c c c Upstream nucleotide summary: a: 1, c: 6, g: 2, t: 0, other: 0 Downstream nucleotide (in genome): a c g g g g c g g Downstream nucleotide summary: a: 1, c: 2, g: 6, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 1, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr1:46760558-46760856 (-) gggagaccaaggtaggaggatcacctgagcctgggaagtcgaggctgcagtgagccaagatcgcaccactgtactccagcctgggcaacaggagagagaccctgtctcaaaaaa-ctaacaaataaaaaaagatctgtataatagaatagatactctggagaaaaagcaatgaataaattaagatttacccaataaattattctctagcaattggttagctatttggaaaaagttaagttagagcctcactttacagtatactctaatgacttttgtataaacaataaattgtggccggg >DW414331:17-316 (+) gggagaccgaggtaggaggatcgcctgggcctgggaggtcgaggctgcggtgggccaagatcgcgccactgtactccggcctgggcaacgggagagagaccctgtctcaaaaaaactaacaaataaaaaaagatctgtataatagaatagatactctggagaaaaagcaatgaataaattaagatttacccaataaattattctctagcaattggttagctatttggaaaaagttaagttagagcctcactttacagtatactctaatgacttttgtataaacaataaattgtggccggg End editing Edited EST: DW416614, type: ag Aligns to: chr1:150578464-150578755 (-+) All mismatches: ag (88), ag (89), ag (111), ag (136), ag (159), ag (162), ag (169), ag (174), ag (182), ag (236), ag (253), Editing mismatches: 11, all mismatches: 11, alignment length: 292, cluster length: 166, total number of As: 49 Locations in RNA: 88 89 111 136 159 162 169 174 182 236 253 Locations in genome: 150578684 150578683 150578661 150578636 150578613 150578610 150578603 150578598 150578590 150578536 150578519 Upstream nucleotide (in genome): c a a c a a a t c c t Upstream nucleotide summary: a: 5, c: 4, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): a g g t a t a g t c g Downstream nucleotide summary: a: 3, c: 1, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 2, at: 1, ca: 1, cc: 1, cg: 0, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr1:150578464-150578755 (-) tccacaaaaaaattaaaaaattaggccgggcgcagtggctcaagcctgtaatcccagcactttgggaggccaaggtgggcggatcacgaggtcaagagatcgagaccatcctgctcaacatggtgaaaccctgtctctactaaaaatacaaaaaattagctgggcatggtggcacgtgcctgtagtcccagctacttgggaggctgaggcaggaaaatcacttgaacctgggaggtagagattgcagtgagcaccgagattgcaccactggactccagcctggtgacagagc >DW416614:17-308 (+) tccacaaaaaaattaaaaaattaggccgggcgcagtggctcaagcctgtaatcccagcactttgggaggccggggtgggcggatcacgaggtcaggagatcgagaccatcctgctcaacgtggtgaaaccctgtctctactagaagtacaaagaattggctgggcgtggtggcacgtgcctgtagtcccagctacttgggaggctgaggcaggaaaatcgcttgaacctgggaggtggagattgcagtgagcaccgagattgcaccactggactccagcctggtgacagagc End editing Edited EST: DW431060, type: ag Aligns to: chr1:160259428-160259681 (-+) All mismatches: ag (66), ag (85), ag (90), ag (140), ag (149), ag (177), ag (179), ag (185), ag (193), Editing mismatches: 9, all mismatches: 9, alignment length: 254, cluster length: 128, total number of As: 36 Locations in RNA: 66 85 90 140 149 177 179 185 193 Locations in genome: 160259632 160259613 160259608 160259558 160259549 160259521 160259519 160259513 160259505 Upstream nucleotide (in genome): t g c a a t t c c Upstream nucleotide summary: a: 2, c: 3, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): c g g a a t g g g Downstream nucleotide summary: a: 2, c: 1, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 1, tt: 1, other: 0 >chr1:160259428-160259681 (-) gggctgggtggagtggctcatacctgtaatcccagcactttgggaggctacggtgggcagatcatctgaggccaggagttcgagacctgcctggccaacatggcaacaccccgtctctaataaaaatataaaaattagcctggcatggtagcatgcgcctatagtcccagctgctcaggaggctgaggcatgagaatcgcttgaacctaggaggtggaggttgcattcaactgagatcataccacttcattcca >DW431060:17-270 (+) gggctgggtggagtggctcatacctgtaatcccagcactttgggaggctgcggtgggcagatcatctggggccgggagttcgagacctgcctggccaacatggcaacaccccgtctctaataagaatataaagattagcctggcatggtagcatgcgcctgtggtcccggctgctcgggaggctgaggcatgagaatcgcttgaacctaggaggtggaggttgcattcaactgagatcataccacttcattcca End editing Edited EST: DW431368, type: ag Aligns to: chr1:44395020-44395273 (-+) All mismatches: ag (16), ag (96), ag (112), ag (137), ag (149), ag (172), ag (174), ag (184), ag (201), ag (206), ag (215), Editing mismatches: 11, all mismatches: 11, alignment length: 254, cluster length: 200, total number of As: 53 Locations in RNA: 16 96 112 137 149 172 174 184 201 206 215 Locations in genome: 44395273 44395193 44395177 44395152 44395140 44395117 44395115 44395105 44395088 44395083 44395074 Upstream nucleotide (in genome): n a c a t t t t c g g Upstream nucleotide summary: a: 2, c: 2, g: 2, t: 4, other: 1 Downstream nucleotide (in genome): g a t a g t a c g a a Downstream nucleotide summary: a: 5, c: 1, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 1, ct: 1, ga: 2, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 1, other: 1 >chr1:44395020-44395273 (-) aggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcaggagttcaaaccagcctgaccaacatggtgaaaccctgtttctactaaaaatacaaaaattagctgggtgtgatggtagcgcctataatcccagctactcaggaggctgaggcaggagaatcgcttgaacccgggaggcagaggttgcagtgagccgagatcgcgccactgcactccagcct >DW431368:16-269 (+) gggccaggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggtggatcacgaggtcaggagttcagaccagcctgaccaacgtggtgaaaccctgtttctactaaagatacaaaaattggctgggtgtgatggtagcgcctgtgatcccagctgctcaggaggctgaggcgggaggatcgcttggacccgggaggcagaggttgcagtgagccgagatcgcgccactgcactccagcct End editing Edited EST: DW436771, type: ag Aligns to: chr1:156163330-156163563 (-+) All mismatches: ag (47), ag (55), ag (56), ag (135), ag (167), ag (177), ag (178), ag (194), ag (203), ag (235), Editing mismatches: 10, all mismatches: 10, alignment length: 234, cluster length: 189, total number of As: 49 Locations in RNA: 47 55 56 135 167 177 178 194 203 235 Locations in genome: 156163534 156163526 156163525 156163446 156163414 156163404 156163403 156163387 156163378 156163346 Upstream nucleotide (in genome): c t a a t t a a t a Upstream nucleotide summary: a: 5, c: 1, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): c a t c g a t t g c Downstream nucleotide summary: a: 2, c: 3, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 3, ca: 0, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 2, tt: 0, other: 0 >chr1:156163330-156163563 (-) attcaaatcaaggccgggcacggtggctcacgcctgtaatctcagaattctgggacgccgagtcggacggatcacctgaagtccgaagttcgagaccagcctggccgccttggcgaaaccccgtctccactaaaaatacgaaataaattagccgggagtaatggcgcgcgcctgtaatcccagctagccgggtggctgaggcacgagaatcgcttgaacccggaggttgtagtg >DW436771:18-251 (+) attcaaatcaaggccgggcacggtggctcgcgcctgtggtctcagaattctgggacgccgagtcggacggatcacctgaagtccgaagttcgagaccagcctggccgccttggcgaagccccgtctccactaaaaatacgaaataaattggccgggagtggtggcgcgcgcctgtagtcccagctggccgggtggctgaggcacgagaatcgcttgagcccggaggttgtagtg End editing Edited EST: CB269976, type: ag Aligns to: chr1:32398617-32398812 (-+) All mismatches: ag (163), ag (164), ag (165), ag (168), ag (170), ag (183), ag (189), Editing mismatches: 7, all mismatches: 7, alignment length: 196, cluster length: 27, total number of As: 16 Locations in RNA: 163 164 165 168 170 183 189 Locations in genome: 32398783 32398782 32398781 32398778 32398776 32398763 32398757 Upstream nucleotide (in genome): c a a a t c t Upstream nucleotide summary: a: 3, c: 2, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): a a a t c g g Downstream nucleotide summary: a: 3, c: 1, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 1, ca: 1, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr1:32398617-32398812 (-) cctgggcaacatagagacaacatctctacaaaaaatacaaaaactagccaggcatagtggtatgaacctgtagttccagctactcaggaggctgaagtggaaggatcactggagcctgggaggtcaaggctgaagtgagccgagactatgccactgcagtctagcctgggagacagagggagaccctgtctcaaaa >CB269976:134-329 (+) cctgggcaacatagagacaacatctctacgggaagtgcaaaaactagccgggcatggtggtatgaacctgtagttccagctactcaggaggctgaagtggaaggatcactggagcctgggaggtcaaggctgangtgagccgagactatgccactgcagtctagcctgggagacagagggagaccctgtctcaaaa End editing Edited EST: BX504099, type: ag Aligns to: chr1:27208310-27208711 (-+) All mismatches: ag (43), ag (50), ag (56), ag (87), ag (90), ag (91), ag (116), ag (117), ag (126), ag (168), ag (262), Editing mismatches: 11, all mismatches: 11, alignment length: 402, cluster length: 220, total number of As: 47 Locations in RNA: 43 50 56 87 90 91 116 117 126 168 262 Locations in genome: 27208669 27208662 27208656 27208625 27208622 27208621 27208596 27208595 27208586 27208544 27208450 Upstream nucleotide (in genome): a c c a c a t a a t t Upstream nucleotide summary: a: 5, c: 3, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): t a g g a t a g t g t Downstream nucleotide summary: a: 3, c: 0, g: 4, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 3, ca: 2, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 1, other: 0 >chr1:27208310-27208711 (-) tttgagacggaccgtcaatcttgttgccccagttggagtgcaatggtgcaatctcagctcactgcaacctccatctcccacgttcaagcaattctcctgcctcagcctcccgagtaagtgggataataggcgcccgccaccacgctcagctaattttttgtatttttagtagagacagcgttttaccatgttggccaggctggtttcgaactcctgaactcaggtgatccacctgccttggcctcccaaagtgctgggattataggcgtgagccaccatgcccggcctgcaacttttatatttatttcttagaggcagggtcttgctcctttgcccaggctggagtgcagtgatgcaatcatagctcactgcgaccttgaactcctgggctcgttaccctcc >BX504099:1-402 (+) tttgagacggaccgtcaatcttgttgccccagttggagtgcagtggtgcgatctcggctcactgcaacctccatctcccacgttcaggcggttctcctgcctcagcctcccgagtgggtgggatagtaggcgcccgccaccacgctcagctaattttttgtatttttggtagagacagcgttttaccatgttggccaggctggtttcgaactcctgaactcaggtgatccacctgccttggcctcccaaagtgctgggattgtaggcgtgagccaccatgcccggcctgcaacttttatatttatttcttagaggcagggtcttgctcctttgcccaggctggagtgcagtgatgcaatcatagctcactgcgaccttgaactcctgggctcgttaccctcc End editing Edited EST: AW136879, type: ag Aligns to: chr1:160993740-160994026 (-+) All mismatches: ag (75), ag (97), ag (127), ag (132), ag (157), ag (165), ag (182), ag (251), ag (253), ag (254), at (269), ag (276), Editing mismatches: 11, all mismatches: 12, alignment length: 287, cluster length: 202, total number of As: 54 Locations in RNA: 75 97 127 132 157 165 182 251 253 254 276 Locations in genome: 160993964 160993942 160993912 160993907 160993882 160993874 160993857 160993788 160993786 160993785 160993763 Upstream nucleotide (in genome): c t c g t t t t t a g Upstream nucleotide summary: a: 1, c: 2, g: 2, t: 6, other: 0 Downstream nucleotide (in genome): g g a t c c c t a t g Downstream nucleotide summary: a: 2, c: 3, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 1, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 1, ta: 1, tc: 3, tg: 1, tt: 1, other: 0 >chr1:160993740-160994026 (-) tttatttttatttatttttatatttttaagaggcaggatctttcttgttcctttgcccaggcaggagtgcagtggtgcaatcatagcttactgcaggttcgaattcctgggcacaagtgattctcttgtctcagcctccggagtacaggattacaggttacaccaccatacccagctaattttttattaaaaaaaattttaaatttaattttctggcggggcatggtggttcacgcctataatcccagcactttggaaggctgaggtgggaggatcacttgagctca >AW136879:13-299 (+) tttatttttatttatttttatatttttaagaggcaggatctttcttgttcctttgcccaggcgggagtgcagtggtgcaatcatggcttactgcaggttcgaattcctgggcacgagtggttctcttgtctcagcctccggagtgcaggattgcaggttacaccaccatgcccagctaattttttattaaaaaaaattttaaatttaattttctggcggggcatggtggttcacgcctgtggtcccagcactttggtaggctggggtgggaggatcacttgagctca End editing Edited EST: AW674474, type: ga Aligns to: chr1:155231876-155232047 (-+) All mismatches: ga (124), ga (127), ga (135), ga (139), ga (142), ga (151), ga (157), ga (171), Editing mismatches: 8, all mismatches: 8, alignment length: 172, cluster length: 48, total number of Gs: 13 Locations in RNA: 124 127 135 139 142 151 157 171 Locations in genome: 155231924 155231921 155231913 155231909 155231906 155231897 155231891 155231877 Upstream nucleotide (in genome): c c c c c c t a Upstream nucleotide summary: a: 1, c: 6, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): g g t c a a a g Downstream nucleotide summary: a: 3, c: 1, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 2, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr1:155231876-155232047 (-) ggggcgaactgaggcgagtgaagtggactctgagggctaccgctaccgccactgctgcggcaggggcgtggagggcagagggccgcggaggccgcagttgcaaacatggctcagagcagagacggcggaaacccgttcgccgagcccagcgagcttgacaacccctttcagg >AW674474:1-172 (+) ggggcgaactgaggcgagtgaagtggactctgagggctaccgctaccgccactgctgcggcaggggcgtggagggcagagggccgcggaggccgcagttgcaaacatggctcagagcagagacagcagaaacccattcaccaagcccagcaagcttaacaacccctttcaag End editing Edited EST: AA321339, type: ag Aligns to: chr1:53695344-53695547 (-+) All mismatches: ag (69), ag (79), ag (89), ag (97), ag (101), ag (136), ag (160), ag (161), ag (175), ag (201), Editing mismatches: 10, all mismatches: 10, alignment length: 205, cluster length: 133, total number of As: 31 Locations in RNA: 69 79 89 97 101 136 160 161 175 201 Locations in genome: 53695479 53695469 53695459 53695451 53695447 53695412 53695388 53695387 53695373 53695347 Upstream nucleotide (in genome): t c c c c t t a a a Upstream nucleotide summary: a: 3, c: 4, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g c c c g g a a g a Downstream nucleotide summary: a: 3, c: 3, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 0, ca: 0, cc: 3, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 2, tt: 0, other: 0 >chr1:53695344-53695547 (-) gagatcatggctcactgcagccttgacctcctggggtgaaggaatcctcccacctcagcctctctagtagctgggaccacggatgcacaccaccacacccagctagttttcgtattttttgtacagatgaggtttagccaagttgcccagacaggtcttaaactcctgggctcaagtgattctcctgcattggcctcccaa-act >AA321339:1-205 (+) gagatcatggctcactgcagccttgacctcctggggtgaaggaatcctcccacctcagcctctctagtggctgggaccgcggatgcacgccaccacgcccggctagttttcgtattttttgtacagatgaggtttggccaagttgcccagacaggtcttggactcctgggctcaggtgattctcctgcattggcctcccagcact End editing Edited EST: AA828126, type: ag Aligns to: chr21:9961290-9961579 (-+) All mismatches: tc (128), ag (211), ag (212), ag (230), ag (235), ag (238), ag (244), ag (266), ag (267), ag (280), ag (283), Editing mismatches: 10, all mismatches: 11, alignment length: 290, cluster length: 73, total number of As: 20 Locations in RNA: 211 212 230 235 238 244 266 267 280 283 Locations in genome: 9961369 9961368 9961350 9961345 9961342 9961336 9961314 9961313 9961300 9961297 Upstream nucleotide (in genome): c a g c g g t a t t Upstream nucleotide summary: a: 2, c: 2, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): a g g g g g a a c a Downstream nucleotide summary: a: 4, c: 1, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 1, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 3, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr21:9961290-9961579 (-) aatcttctattctagaattttgcatgcttgtgaagtttttagaaactgcatcatcattaagcaattaactgtggaaatgactttaaatagttatagttaaagacaattgataaggaaatttggttatttctgtggtctacaataacttaataaccataattagggtggatgtggtggctcattcctgtaatcccagctctttgagaggccaagttaggtggatcacctgaggtcaggagtttgagaccagcctggccaacatggtaaaactctgtctttactaaaaataa >AA828126:1-290 (+) aatcttctattctagaattttgcatgcttgtgaagtttttagaaactgcatcatcattaagcaattaactgtggaaatgactttaaatagttatagttaaagacaattgataaggaaatttggttatctctgtggtctacaataacttaataaccataattagggtggatgtggtggctcattcctgtaatcccagctctttgagaggccgggttaggtggatcacctggggtcgggggtttgggaccagcctggccaacatggtggaactctgtctttgctgaaaataa End editing Edited EST: AV651983, type: ga Aligns to: chr22:42517881-42518065 (-+) All mismatches: ga (168), ga (172), ga (174), ga (177), ga (180), Editing mismatches: 5, all mismatches: 5, alignment length: 185, cluster length: 13, total number of Gs: 5 Locations in RNA: 168 172 174 177 180 Locations in genome: 42517898 42517894 42517892 42517889 42517886 Upstream nucleotide (in genome): a a a a a Upstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a Downstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 5, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr22:42517881-42518065 (-) cccatccagatggaatcagggagatggagggctcctgaggtatgtctccatgaaaatgatcatatggagaaatgacgtgatctgtctaaatgtactgcaaagagatttctatttttggcagaaaatttggatgaattaattatataatagatgcacaaaaaactaaagaaagagaagaagaaaaa >AV651983:1-185 (+) cccatccagatggaatcagggagatggagggctcctgaggtatgtctccatgaaaatgatcatatggagaaatgacgtgatctgtctaaatgtactgcaaagagatttctatttttggcagaaaatttggatgaattaattatataatagatgcacaaaaaactaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: AV683406, type: ga Aligns to: chr22:21845618-21845937 (-+) All mismatches: ga (307), ga (313), ga (315), ga (317), ga (318), ga (319), Editing mismatches: 6, all mismatches: 6, alignment length: 319, cluster length: 14, total number of Gs: 6 Locations in RNA: 307 313 315 317 318 319 Locations in genome: 21845631 21845625 21845623 21845620 21845619 21845618 Upstream nucleotide (in genome): a a a a g g Upstream nucleotide summary: a: 4, c: 0, g: 2, t: 0, other: 0 Downstream nucleotide (in genome): a a t g g n Downstream nucleotide summary: a: 2, c: 0, g: 2, t: 1, other: 1 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr22:21845618-21845937 (-) agtaggggctgctcagccaggcgcagtggctcacgcctgtaatcccagcactttgggaggcagaggcgggtgggtcacctgaggtcgggagatcgagaccagcctgaccaatatggagaaaccctgtctctactaaatatacaaaattagccgggtgtggtggcatgtgcctgtaatcccagctacttaggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcggtgagccaagatcgcaccattgcactccagcctgggcaacaagagcgaaactccgtctcaaaaaaaaaagaaaaagagtaggg >AV683406:1-319 (+) agtaggggctgctcagccaggcgcagtggctcacgcctgtaatcccagcactttgggaggcagaggcgggtgggtcacctgaggtcgggagatcgagaccagcctgaccaatatggagaaaccctgtctctactaaatatacaaaattagccgggtgtggtggcatgtgcctgtaatcccagctacttaggaggctgaggcaggagaatcgcttgaacccaggaggcggaggttgcggtgagccaagatcgcaccattgcactccagcctgggcaacaagagcgaaactccgtctcaaaaaaaaaaaaaaaaaaa-aaaa End editing Edited EST: F05164, type: ag Aligns to: chr2:99309924-99310205 (-+) All mismatches: ag (87), ag (111), ag (118), ag (158), ag (160), Editing mismatches: 5, all mismatches: 5, alignment length: 281, cluster length: 74, total number of As: 20 Locations in RNA: 87 111 118 158 160 Locations in genome: 99310119 99310095 99310088 99310048 99310046 Upstream nucleotide (in genome): c a a c c Upstream nucleotide summary: a: 2, c: 3, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): g g g c g Downstream nucleotide summary: a: 0, c: 1, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 0, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr2:99309924-99310205 (-) gtatgaaactatttcctttaaagtcctttgccctccccagttgatctttttttttttttttttgagagaagctctcactctgtcacagctcactacagccttaacctctaaggctcaagcaattttcccacctgagcccccgcaagtatgtgggaccacagatgcgtgcaaccacacccagctaattctttaatttgtctatagaaatggggtctcgctttgttgcctagcctgtttataattgttttaaatatttcttttacattgagaaccacatcagac >F05164:1-281 (+) gtatgaaactatttcctttaaagtcctttgccctccccagttgatctttttttttttttttttgagagaagctctcactctgtcacggctcactacagccttaacctctagggctcaggcaattttcccacctgagcccccgcaagtatgtgggaccgcggatg-gtgcaaccacacccagctaattctttaatttgtctatagaaatggggtctcgctttgttgcctagcctgtttataattgttttaaatatttcttttacattgagaaccacatcagac End editing Edited EST: DW418957, type: ag Aligns to: chr2:122099834-122100230 (-+) All mismatches: tc (22), ag (258), ag (286), ag (289), ag (297), ag (307), ag (335), ag (337), ag (357), ag (358), ag (359), ag (385), Editing mismatches: 11, all mismatches: 12, alignment length: 396, cluster length: 128, total number of As: 38 Locations in RNA: 258 286 289 297 307 335 337 357 358 359 385 Locations in genome: 122099989 122099961 122099958 122099950 122099940 122099912 122099910 122099890 122099889 122099888 122099862 Upstream nucleotide (in genome): t c c g c a g c a a t Upstream nucleotide summary: a: 3, c: 4, g: 2, t: 2, other: 0 Downstream nucleotide (in genome): g g c g g g c a a g g Downstream nucleotide summary: a: 2, c: 2, g: 7, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 0, ca: 1, cc: 1, cg: 2, ct: 0, ga: 0, gc: 1, gg: 1, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr2:122099834-122100230 (-) ctatttttctgttctctattttgtttatctctgctctaatctttattgttttctcctgctagctttagatgtagttcttttttctagttccttaagataaaagtttaggttgttgattagagagctttcttttttaatgtaagcatttataactctaaatttccctcttcagcactgtttttgctgcatccccaaaaattgtcttatcattttcatttgtctcaagatgttttctaaggctaggtgcggtggctcacgctagtaatcccagcactttgggaggccgaggcaggaggattgcttgagcccacgagttcaagactagcctggtcaacatggcaaagccccatcatacaaaatacaaaattagctgggcatggtggtgtgcacctctggt >DW418957:17-412 (+) ctattcttctgttctctattttgtttatctctgctctaatctttattgttttctcctgctagctttagatgtagttcttttttctagttccttaagataaaagtttaggttgttgattagagagctttcttttttaatgtaagcatttataactctaaatttccctcttcagcactgtttttgctgcatccccaaaaattgtcttatcattttcatttgtctcaagatgttttctaaggctgggtgcggtggctcacgctagtaatcccggcgctttggggggccgaggcgggaggattgcttgagcccacgagttcagggctagcctggtcaacatggcggggccccatcatacaaaatacaaaattggctgggcatggtggtgtgcac-tctggt End editing Edited EST: DW434185, type: ag Aligns to: chr2:242184924-242185167 (-+) All mismatches: ag (16), ag (26), ag (49), ag (74), ag (78), ag (114), Editing mismatches: 6, all mismatches: 6, alignment length: 244, cluster length: 99, total number of As: 22 Locations in RNA: 16 26 49 74 78 114 Locations in genome: 242185167 242185157 242185134 242185109 242185105 242185069 Upstream nucleotide (in genome): n t a c t t Upstream nucleotide summary: a: 1, c: 1, g: 0, t: 3, other: 1 Downstream nucleotide (in genome): t c g a g a Downstream nucleotide summary: a: 2, c: 1, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 1 >chr2:242184924-242185167 (-) atggctcactacagccttggctttccagactcaagcagtcctcccaccttagccttccaagtagctgggaccacaggtgcatgctaccgcaccaggctaatttttttcttcttttagttagtagagatgaggtcttgttatgttgtccaggctggtctcaaactcctcaagtgatcctctcgccttggccttccaaactgctgggattacaggtgtgagccactgcacccagcctcctttatat >DW434185:16-259 (+) gtggctcactgcagccttggctttccagactcaggcagtcctcccaccttagccttccgagtggctgggaccacaggtgcatgctaccgcaccaggctgatttttttcttcttttagttagtagagatgaggtcttgttatgttgtccaggctggtctcaaactcctcaagtgatcctctcgccttggccttccaaactgctgggattacaggtgtgagccactgcacccagcctcctttatat End editing Edited EST: BF871805, type: ag Aligns to: chr2:48104806-48105124 (-+) All mismatches: ag (105), ag (122), ag (125), ag (128), ag (137), ag (169), ag (173), Editing mismatches: 7, all mismatches: 7, alignment length: 319, cluster length: 69, total number of As: 23 Locations in RNA: 105 122 125 128 137 169 173 Locations in genome: 48105020 48105003 48105000 48104997 48104988 48104956 48104952 Upstream nucleotide (in genome): t t a t t c t Upstream nucleotide summary: a: 1, c: 1, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): a a a c g g g Downstream nucleotide summary: a: 3, c: 1, g: 3, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 2, tt: 0, other: 0 >chr2:48104806-48105124 (-) ctgggccaggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggatgatgaggtcaggagtttgagaccagcctgatcaacatggtaaaaccccatctctactaaaaatacaaaaattagctgggcgtgttggcacgcgcctgtaatcccagctagttgggaggctgaagcaggagaatcgcttgaacctgggagtcggaggttgcagtgagccaagatcgcaccactgcattccagcctgggcgacaaagcgagactccatctcaaaaacaaaacaaaacgaaacgaaaaaccttattct >BF871805:1-319 (+) ctgggccaggcacggtggctcacgcctgtaatcccagcactttgggaggccgaggcaggcggatgatgaggtcaggagtttgagaccagcctgatcaacatggtgaaaccccatctctactgaagatgcaaaaattggctgggcgtgttggcacgcgcctgtaatcccggctggttgggaggctgaagcaggagaatcgcttgaacctgggagtcggaggttgcagtgagccaagatcgcaccactgcattccagcctgggcgacaaagcgagactccatctcanaaacaaaacanaacgaaacgaanaaccttattct End editing Edited EST: T85065, type: ag Aligns to: chr3:184942030-184942293 (-+) All mismatches: ag (57), ag (88), ag (117), ag (163), ag (172), ag (178), ag (179), ag (224), ag (225), ag (260), Editing mismatches: 10, all mismatches: 10, alignment length: 265, cluster length: 204, total number of As: 44 Locations in RNA: 57 88 117 163 172 178 179 224 225 260 Locations in genome: 184942237 184942206 184942177 184942131 184942122 184942116 184942115 184942071 184942070 184942034 Upstream nucleotide (in genome): c a t t t c a c a g Upstream nucleotide summary: a: 3, c: 3, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g g g t g a g a g t Downstream nucleotide summary: a: 2, c: 0, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 3, at: 0, ca: 2, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 0, tg: 2, tt: 1, other: 0 >chr3:184942030-184942293 (-) ttttggtgacagggtctcattctgtctcccagactggagtacagtggcacgatctcagctcaccacaacctccacctcccgggttcaagtgattctcctgcttcagcctctccagtagctgggattacaggcacgtgccaccacacccggctaattttttgtatttttagtagagacaaggtttcaccatgttgaccagg-ctggtctcaaaccgccgacctcaagtgagccacccgcctcggcctcccaaagtgctggga-ttac >T85065:1-265 (+) ttttgntgacagggtctcattctgtctcccagactggagtacagtggcacgatctcggctcaccacaacctccacctcccgggttcaggtgattctcctgcttcagcctctccagtggctgggattacaggcacgtgccaccacacccggctaattttttgtgtttttagtggagacggggtttcaccatgttgaccagggctggtntcaaaccgccgacctcgggtgagccacccgnctcggcctcc-aaagtgctggggattac End editing Edited EST: DA329849, type: ag Aligns to: chr3:47291292-47291580 (-+) All mismatches: ag (63), ag (83), ag (96), ag (126), ag (127), ag (168), ag (174), ag (252), ag (261), ag (283), Editing mismatches: 10, all mismatches: 10, alignment length: 291, cluster length: 221, total number of As: 44 Locations in RNA: 63 83 96 126 127 168 174 252 261 283 Locations in genome: 47291520 47291500 47291487 47291457 47291456 47291415 47291409 47291331 47291322 47291300 Upstream nucleotide (in genome): t a c c a c c c c t Upstream nucleotide summary: a: 2, c: 6, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): t t g a g g t g c c Downstream nucleotide summary: a: 1, c: 2, g: 4, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 1, cc: 1, cg: 3, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 1, other: 0 >chr3:47291292-47291580 (-) tgttgcaggggtggagaaggtattacaa--ttttttttttttttgagacagtgactcgctctattgctcaggctggagtgcaatggtgcggtctcagcttactgcaacctctgtctcccgggttcaagcaattctcctgccttagcctctctagtagttgggattacaggcgcatgccaccatgcttggccaatttttgtaatttttgtagagacaaggtttcacaagggtggtctcgaactcctgacctcagatgatccacctgccttggcctccctaagtactggaatt >DA329849:1-291 (+) tgttgcaggggtggagaaggtattacaattttttttttttttttgagacagtgactcgctctgttgctcaggctggagtgcagtggtgcggtctcggcttactgcaacctctgtctcccgggttcgggcaattctcctgccttagcctctctagtagttgggattacgggcgcgtgccaccatgcttggccaatttttgtaatttttgtagagacaaggtttcacaagggtggtctcgaactcctgacctcggatgatccgcctgccttggcctccctaagngctggaatt End editing Edited EST: DW413044, type: ag Aligns to: chr3:49097719-49098023 (-+) All mismatches: ag (26), ag (27), ag (50), ag (73), ag (74), ag (82), ag (83), ag (84), ag (108), ag (135), gc (303), Editing mismatches: 10, all mismatches: 11, alignment length: 305, cluster length: 110, total number of As: 30 Locations in RNA: 26 27 50 73 74 82 83 84 108 135 Locations in genome: 49098014 49098013 49097990 49097967 49097966 49097958 49097957 49097956 49097932 49097905 Upstream nucleotide (in genome): c a c c a g a a a c Upstream nucleotide summary: a: 5, c: 4, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): a g g a c a a c a c Downstream nucleotide summary: a: 5, c: 3, g: 2, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 2, ag: 1, at: 0, ca: 2, cc: 1, cg: 1, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr3:49097719-49098023 (-) tgggaggccaaggctggtggatcacctgaggtcaggagttttggaccagcctggccaacatggtgaaaccccgtctctactaaaaatacaaaaattagggctgggtgtggtggctcacacctgtaatcccagcactttgggaggccaaggcaggcagatcacgaggtcaggagatcaagaccatcctggctaacacggtgaaaccctgtctctaataacaatacaaaaaattagccagtcgtggtggcgggtgcctgtggtcccagctacttgggaggctgaggcaggagaatggcatgaacctg >DW413044:17-321 (+) tgggaggccggggctggtggatcacctgaggtcgggagttttggaccagcctggccggcatggtggggccccgtctctactaaaaatacaagaattagggctgggtgtggtggctcacgcctgtaatcccagcactttgggaggccaaggcaggcagatcacgaggtcaggagatcaagaccatcctggctaacacggtgaaaccctgtctctaataacaatacaaaaaattagccagtcgtggtggcgggtgcctgtggtcccagctacttgggaggctgaggcacgagaatggcatgaacctg End editing Edited EST: DW464833, type: ag Aligns to: chr3:121392506-121392832 (-+) All mismatches: ag (49), ag (50), ag (73), ag (106), ag (118), ag (123), ag (136), Editing mismatches: 7, all mismatches: 7, alignment length: 327, cluster length: 88, total number of As: 30 Locations in RNA: 49 50 73 106 118 123 136 Locations in genome: 121392819 121392818 121392795 121392762 121392750 121392745 121392732 Upstream nucleotide (in genome): c a c a t a t Upstream nucleotide summary: a: 3, c: 2, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): a g g a c a g Downstream nucleotide summary: a: 3, c: 1, g: 3, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 0, ca: 1, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr3:121392506-121392832 (-) actttgggaggccaaggtgagtggatcacttgaggccaggagtttgagaccagtcttgccaacatggcgaaatcccttctctactaaaaatacaaaaattagccagccatggtggtgcacgcctgtaatcccagctactcgggtggctgaggcatgtgaatcacttgaacttgggaggcggaggttgcagtgagctgagatcgcacccctgcactccagcctaggtgacagagcgagactgtgtttcaaaaata-gatagatagatagatagatagatagatagatagatagatagatagcaatcccatttataatagctacaaagaa >DW464833:36-362 (+) actttgggaggccggggtgagtggatcacttgaggccgggagtttgagaccagtcttgccaacatggcgagatcccttctctgctaagaatacaaaaattggccagccatggtggtgcacgcctgtaatcccagctactcgggtggctgaggcatgtgaatcacttgaacttgggaggcggaggttgcagtgagctgagatcgcacccctgcactccagcctaggtgacagagcgagactgtgtttcaaaaatacgatagatagatagatagatagatagatagatagatagatagatagcaatcc-atttataatagctacaaagaa End editing Edited EST: BM554484, type: ga Aligns to: chr3:127256470-127256610 (-+) All mismatches: ga (130), ga (133), ga (135), ga (136), ga (138), Editing mismatches: 5, all mismatches: 5, alignment length: 138, cluster length: 10, total number of Gs: 7 Locations in RNA: 130 133 135 136 138 Locations in genome: 127256479 127256475 127256473 127256472 127256470 Upstream nucleotide (in genome): g a g g a Upstream nucleotide summary: a: 2, c: 0, g: 3, t: 0, other: 0 Downstream nucleotide (in genome): g g g a n Downstream nucleotide summary: a: 1, c: 0, g: 3, t: 0, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr3:127256470-127256610 (-) gggggacagagtgggtggggaggggagccgccatacagtggccaggaccagctttgcccaagtggtggcaaccgcatgaccacaggaacgatggcgtgagccccgtggcaacctggaggaagggtgtgctgggcaggggag >BM554484:1-138 (+) gggggacagagtgggtggggaggggagccgccatacagtggccaggaccagctttgcccaagtggtggcaaccgcatgaccacaggaacgatggcgtgagccccgtggcaacctggaggaaggg-gtg-tgag-aagaaaa End editing Edited EST: AA365584, type: ag Aligns to: chr3:119678379-119678681 (-+) All mismatches: ag (139), ag (140), ag (149), ag (188), ag (192), ag (196), ag (209), ag (223), ag (224), ag (258), Editing mismatches: 10, all mismatches: 10, alignment length: 303, cluster length: 120, total number of As: 40 Locations in RNA: 139 140 149 188 192 196 209 223 224 258 Locations in genome: 119678543 119678542 119678533 119678494 119678490 119678486 119678473 119678459 119678458 119678424 Upstream nucleotide (in genome): t a a c t c c g a c Upstream nucleotide summary: a: 3, c: 4, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): a a a g c g g a c t Downstream nucleotide summary: a: 4, c: 2, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 0, ca: 0, cc: 0, cg: 3, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr3:119678379-119678681 (-) atgcctgtaatcctagcactttgggaacaataattgttattgctaataatagcacttagggaggctgaggttggaggatcatttgaggtcacgagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaaaattagctgggcatggtggtacacgcgtgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggagacagaggttgcagtgagctgagatcatgccactgcactccagcctgggcgacagagtgaggctctgtcttt >AA365584:1-303 (+) atgcctgtaatcctagcactttgggaacaataattgtnattgctaataatagcacttagggaggctgaggttggaggntcatttgaggtcacgagttcaagaccagcctggccaacatggtgaaaccccatctntactggaaatacaagaaaattagctgggcatggtggtacacgcgtgtnatcccggctgctcgggaggctgaggcgggagaatcacttgggcctgggagacagaggttgcagtgagctgagatcgtgccactgcactccagcctgggcgacagagtgaggctctgtcttt End editing Edited EST: DW411811, type: ag Aligns to: chr4:39796316-39796627 (-+) All mismatches: ag (28), ag (131), ag (137), ag (140), ag (162), ag (166), Editing mismatches: 6, all mismatches: 6, alignment length: 311, cluster length: 140, total number of As: 22 Locations in RNA: 28 131 137 140 162 166 Locations in genome: 39796616 39796512 39796506 39796503 39796481 39796477 Upstream nucleotide (in genome): a t t t t c Upstream nucleotide summary: a: 1, c: 1, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g t g g g g Downstream nucleotide summary: a: 0, c: 0, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 3, tt: 1, other: 0 >chr4:39796316-39796627 (-) ggctcactgcaagctccacctcctgggttcatgccattctcctgcctcagcctcccaagtagctgggactgtaggtgcccgccaccacgcccagctatttttttttttcttttgtatttttagtagagacggggtttcactgcgttagccaggatggtctccatctcctgacctcgtgatctgccagcctcggcctcccaaagtgctggcattacaggcgtgagccaccacgccgggcctaatttttgtatttttagtagagacggggtttcacctttttggccaggctgatctggatctcctgaccttgtg >DW411811:17-327 (+) ggctcactgcaggctccacctcctgggttcatgccattctcctgcctcagcctcccaagtagctgggactgtaggtgcccgccaccacgcccagcta-ttttttttttcttttgtgtttttggtggagacggggtttcactgcgttggccgggatggtctccatctcctgacctcgtgatctgccagcctcggcctcccaaagtgctggcattacaggcgtgagccaccacgccgggcctaatttttgtatttttagtagagacggggtttcacctttttggccaggctgatctggatctcctgaccttgtg End editing Edited EST: DW436412, type: ag Aligns to: chr4:39796391-39796627 (-+) All mismatches: ag (28), ag (131), ag (137), ag (140), ag (162), ag (166), Editing mismatches: 6, all mismatches: 6, alignment length: 236, cluster length: 140, total number of As: 22 Locations in RNA: 28 131 137 140 162 166 Locations in genome: 39796616 39796512 39796506 39796503 39796481 39796477 Upstream nucleotide (in genome): a t t t t c Upstream nucleotide summary: a: 1, c: 1, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g t g g g g Downstream nucleotide summary: a: 0, c: 0, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 3, tt: 1, other: 0 >chr4:39796391-39796627 (-) ggctcactgcaagctccacctcctgggttcatgccattctcctgcctcagcctcccaagtagctgggactgtaggtgcccgccaccacgcccagctatttttttttttcttttgtatttttagtagagacggggtttcactgcgttagccaggatggtctccatctcctgacctcgtgatctgccagcctcggcctcccaaagtgctggcattacaggcgtgagccaccacgccggg >DW436412:17-252 (+) ggctcactgcaggctccacctcctgggttcatgccattctcctgcctcagcctcccaagtagctgggactgtaggtgcccgccaccacgcccagctatttttttttt-cttttgtgtttttggtggagacggggtttcactgcgttggccgggatggtctccatctcctgacctcgtgatctgccagcctcggcctcccaaagtgctggcattacaggcgtgagccaccacgccggg End editing Edited EST: BM802908, type: ga Aligns to: chr4:7065774-7065911 (-+) All mismatches: ga (220), ga (222), ga (223), ga (226), ga (228), ga (230), Editing mismatches: 6, all mismatches: 6, alignment length: 136, cluster length: 12, total number of Gs: 6 Locations in RNA: 220 222 223 226 228 230 Locations in genome: 7065785 7065783 7065782 7065778 7065776 7065774 Upstream nucleotide (in genome): t a g t t a Upstream nucleotide summary: a: 2, c: 0, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): a g a t a n Downstream nucleotide summary: a: 3, c: 0, g: 1, t: 1, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 0, tt: 1, other: 1 >chr4:7065774-7065911 (-) gaacagtggccagaacctggaagaggacatgggtcagagtgaacagaaggcagatcctcctgctacagagaagaccctcctggaagagaaggtcaagttggaggaacagctgaaggagactgtggtgaggactgtgag >BM802908:95-230 (+) gaacagtggccagaacctggaagaggacatgggtcagagtgaacagaaggcagatcctcctgctacagagaagaccctcctggaagagaaggtcaagttggaggaacagctgaaggagactgtgg-aaaaa-tataaa End editing Edited EST: BQ215591, type: ga Aligns to: chr4:7065774-7065902 (-+) All mismatches: ga (211), ga (213), ga (214), ga (217), ga (219), ga (221), Editing mismatches: 6, all mismatches: 6, alignment length: 127, cluster length: 12, total number of Gs: 6 Locations in RNA: 211 213 214 217 219 221 Locations in genome: 7065785 7065783 7065782 7065778 7065776 7065774 Upstream nucleotide (in genome): t a g t t a Upstream nucleotide summary: a: 2, c: 0, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): a g a t a n Downstream nucleotide summary: a: 3, c: 0, g: 1, t: 1, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 0, tt: 1, other: 1 >chr4:7065774-7065902 (-) ccagaacctggaagaggacatgggtcagagtgaacagaaggcagatcctcctgctacagagaagaccctcctggaagagaaggtcaagttggaggaacagctgaaggagactgtggtgaggactgtgag >BQ215591:95-221 (+) ccagaacctggaagaggacatgggtcagagtgaacagaaggcagatcctcctgctacagagaagaccctcctggaagagaaggtcaagttggaggaacagctgaaggagactgtgg-aaaaa-tataaa End editing Edited EST: BX506321, type: ag Aligns to: chr4:185260369-185260968 (-+) All mismatches: ag (454), ag (466), ag (479), ag (516), ag (523), ag (524), ag (540), ag (562), ag (564), ag (575), Editing mismatches: 10, all mismatches: 10, alignment length: 601, cluster length: 122, total number of As: 25 Locations in RNA: 454 466 479 516 523 524 540 562 564 575 Locations in genome: 185260516 185260504 185260491 185260454 185260447 185260446 185260430 185260408 185260406 185260395 Upstream nucleotide (in genome): c t a c a a c t c c Upstream nucleotide summary: a: 3, c: 5, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): c g t g a c g c g c Downstream nucleotide summary: a: 1, c: 4, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 1, ca: 0, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr4:185260369-185260968 (-) ggcacaagttacaggtcacaaagaccttgctgataaaactggatgcagtaaagaagctggccaaaacccaccaaaactaagata-gtgatgaaagtgacctctggttgtccttactgctcattatatgctaattataatgcattagcatgctaaaagacactcccaccagtgccataacagtttaccagtgccatggcaacatcaggaagttaccctatatggcctgaaaaggggaggaaccctcagttccaggaattgcccacctctttcctagaaaactcatgaataagtcaccccttgtttagcataaaatcaagaagtaacaataagtataagcagctgagcggcccatgctgctgctctgtctatggagcagccattcctttattccttcactttctttgttttttgttttttgttttgtttttttgtttgttttgagacagagtctcactgtgacacctagtttggactgcaatggcgcgatcttggctcactgaaacctccgcttcccaggttcaaacgattctcctgcctcagccttccgagtagctgggactacaggtgtgcaccaccatgcctggctaatttttgtagttt >BX506321:1-601 (+) ggcacaagttacaggtcacaaagaccttgctgataaaactggatgcagtaaagaagctggccaaaacccaccaaaactaagatacntgatgaaagtgacctctggttgnccttactgctcattatatgctaattataatgcattagcatgctaaaagacactcccaccagtgccataacagtttaccagtgccatggcaacatcaggaagttaccctatatggcctgaaaaggggaggaaccctcagttccaggaattgcccacctctttcctagaaaactcatgaataagtcaccccttgtttagcataaaatcaagaagtaacaataagtataagcagctgagcggcccatgctgctgctctgtctatggagcagccattcctttattccttcactttctttgttttttgttttttgttttgtttttttgtttgttttgagacagagtctcgctgtgacacctggtttggactgcagtggcgcgatcttggctcactgaaacctccgcttcccgggttcaggcgattctcctgnctcggccttccgagtanctgggactgcgggtgtgcaccgccatgcctggctaatttttgtagttt End editing Edited EST: AV723651, type: ga Aligns to: chr4:168155130-168155326 (-+) All mismatches: ga (153), ga (156), ga (166), ga (170), ga (177), ga (180), ga (186), ga (201), ga (266), ga (303), Editing mismatches: 10, all mismatches: 10, alignment length: 196, cluster length: 151, total number of Gs: 50 Locations in RNA: 153 156 166 170 177 180 186 201 266 303 Locations in genome: 168155288 168155285 168155275 168155271 168155264 168155261 168155255 168155240 168155175 168155138 Upstream nucleotide (in genome): a c a a c a c a a a Upstream nucleotide summary: a: 7, c: 3, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): c c t t c c c c t a Downstream nucleotide summary: a: 1, c: 6, g: 0, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 0, at: 3, ca: 0, cc: 3, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr4:168155130-168155326 (-) agatgctcaaggtgtcagccgtactgtgtgtgtgtgcagccgcttggtgcagtcagtctctcgcagctgccgcggcggtggctgcagccggggggcggtcggacggcggtaattttctggatgataaacaatggctcaccacaatctctcagtatgacaaggaagtcggacagtggaacaaattccgagacgtaagt >AV723651:115-310 (+) agatgctcaaggtgtcanccgtactgtgtgtgtgtgcaaccacttggtgcaatcaatctctcacaactgccacggcggtggctgcaaccggggggcggtcggacggcggtaattttctggatgataaacaatggctcaccacaatctctcaatatgacaaggaagtcggacagtggaacaaattccgaaacg-aagt End editing Edited EST: DA219803, type: ag Aligns to: chr5:145525455-145525983 (-+) All mismatches: ag (119), ag (125), ag (128), ag (133), ag (162), ag (163), ag (188), ag (237), ag (246), Editing mismatches: 9, all mismatches: 9, alignment length: 529, cluster length: 127, total number of As: 23 Locations in RNA: 119 125 128 133 162 163 188 237 246 Locations in genome: 145525864 145525859 145525856 145525851 145525822 145525821 145525796 145525747 145525738 Upstream nucleotide (in genome): a c g c c a c t t Upstream nucleotide summary: a: 2, c: 4, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): t c t g a g a t g Downstream nucleotide summary: a: 2, c: 1, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 2, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 0, tg: 1, tt: 1, other: 0 >chr5:145525455-145525983 (-) aaatgactttagttggtgctcttcttttcagtctcaccttatctctctctctctctcttctctttctttttttttttttttcggagttttgctcttgttgcccaggctgctggagtgcaatgg-cacgatctcagctcaccgcagcctctgcctcctggctcaagcgattctcctgcctcagcctcccaagtagctgggcgttacaggtgtgcgccaccatgcccagctaattttgtatttttagtagagacggggtttctccatgttggacaggctggtcttgaactcttggcctcccaaagtgttgggtttacaggcgtgagccaccacgcccagcccttatctctatttctagagctatttaatgccaccaatttctgagtctctttctatttaatgccaccaatttctgaggaactagagtgcagagtggattgcttttcagctttttctattaggattcagatagctttttaattgctgctaatatatttgtcattcatattgcttttttgttttcaaaattcag >DA219803:1-529 (+) aaatgactttagttggtgctcttcttttcagtctcaccttatctctctctctctctcttctctttc-ttttttttttttttcggagttttgctcttgttgcccaggctgctggagtgcagtggccgcggtctcggctcaccgcagcctctgcctcctggctcgggcgattctcctgcctcagcctcccgagtagctgggcgttacaggtgtgcgccaccatgcccagctaattttgtgtttttagtggagacggggtttctccatgttggacaggctggtcttgaactcttggcctcccaaagtgttgggtttacaggcgtgagccaccacgcccagcccttatctctatttctagagctatttaatgccaccaatttctgagtctctttctatttaatgccaccaatttctgaggaactagagtgcagagtggattgcttttcagctttttctattaggattcagatagctttttaattgctgctaatatatttgtcattcatattgcttttttgttttcaaaattcag End editing Edited EST: DW434696, type: ag Aligns to: chr5:133314435-133314676 (-+) All mismatches: ag (51), ag (78), ag (84), ag (89), ag (127), ag (138), ag (161), ag (207), ag (232), ag (233), ag (234), Editing mismatches: 11, all mismatches: 11, alignment length: 242, cluster length: 184, total number of As: 36 Locations in RNA: 51 78 84 89 127 138 161 207 232 233 234 Locations in genome: 133314642 133314615 133314609 133314604 133314566 133314555 133314532 133314486 133314461 133314460 133314459 Upstream nucleotide (in genome): c t c c c a c a c a a Upstream nucleotide summary: a: 4, c: 6, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): g c c g c t g g a a g Downstream nucleotide summary: a: 2, c: 3, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 1, ca: 1, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr5:133314435-133314676 (-) cacccaggctggagttcagtggcacgatctctgcagcctccacctcccgggattaagtgatactcccacctcagccttgcaagtagctgggactacaggtgcatgccaccacacctggctaatttttgtattttttgtggaggcaggatttcgccatgttgcccaggttgttcttgaacttgtgagctcaagcgatctgcccgccttggcctcccaaagtgctgggattacaggtgtgagcc >DW434696:17-258 (+) cacccaggctggagttcagtggcacgatctctgcggcctccacctcccgggattaagtgatgctcccgcctcggccttgcaagtagctgggactacaggtgcatgccaccgcacctggctagtttttgtattttttgtggaggcgggatttcgccatgttgcccaggttgttcttgaacttgtgagctcaggcgatctgcccgccttggcctcccggggtgctgggattacaggtgtgagcc End editing Edited EST: BF857515, type: ag Aligns to: chr5:140911848-140912076 (-+) All mismatches: ag (140), ag (170), ag (196), ag (225), ag (236), ag (240), ag (248), ag (253), Editing mismatches: 8, all mismatches: 8, alignment length: 229, cluster length: 114, total number of As: 40 Locations in RNA: 140 170 196 225 236 240 248 253 Locations in genome: 140911963 140911933 140911907 140911878 140911867 140911863 140911855 140911850 Upstream nucleotide (in genome): a c a c t c t c Upstream nucleotide summary: a: 2, c: 4, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g a a g c g a g Downstream nucleotide summary: a: 3, c: 1, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 1, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr5:140911848-140912076 (-) ggtactacttaaactgagttgaaagaccaattaaggaattaaggaggctgggcatggtggcacattcctgtaatcccagcaggaagctgaggtgggaagattgcttgagaccaagagttcaagaccagcctgggaaacaaagcaagacccctgtctctacaaaacataaaatactagctgagcacagtggcgtgtgccagtagtcaactactcaggaggctaaggcaga >BF857515:27-255 (+) ggtactacttaaactgagttgaaagaccaattaaggaattaaggaggctgggcatggtggcacattcctgtaatcccagcaggaagctgaggtgggaagattgcttgagaccaggagttcaagaccagcctgggaaacaaagcgagacccctgtctctacaaaacataagatactagctgagcacagtggcgtgtgccggtagtcaactgctcgggaggctgaggcgga End editing Edited EST: T07348, type: ag Aligns to: chr6:86359050-86359336 (-+) All mismatches: ag (73), ag (90), ag (93), ag (115), ag (185), Editing mismatches: 5, all mismatches: 5, alignment length: 286, cluster length: 113, total number of As: 23 Locations in RNA: 73 90 93 115 185 Locations in genome: 86359263 86359246 86359243 86359221 86359151 Upstream nucleotide (in genome): t t t t a Upstream nucleotide summary: a: 1, c: 0, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a g g g g Downstream nucleotide summary: a: 1, c: 0, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 3, tt: 0, other: 0 >chr6:86359050-86359336 (-) cgggttcatgccattctcctgcctcagcctcccgagtagctgcgactacaggcgccagccaccacgcccggctaattttttgtattttttagtagagatggggtttcaccacgttagccaggatggtctcgatctcctgacctcgttattaccccgcctcggcctcccaaagtgctgggattacaagcatgagccaccatgcccagcctaaccactgatctttttactgtctctatagtttttgtcttttccagaatgtcatataattgtaatcatatagtatgtag >T07348:1-286 (+) cgggttcatgccattctcctgcctcagcctcccgagtagctgcgactacaggcgccag-caccacgnccggctgattttttgtattttttggtggagatggggtttcaccacgttggccaggatggtctcgatctcctgacctcgttattaccccgcctcggcctcccaaagtgctgggattacaggcatgagccaccatgnccagcctaaccactgatctttttactgtctctatagtttttgtcttttccagaatgtcatataattgtaatcatatagtatgtag End editing Edited EST: F03185, type: ag Aligns to: chr6:152507432-152507691 (-+) All mismatches: ag (84), ag (113), ag (114), ag (118), ag (123), ag (163), ag (166), ag (204), ag (205), Editing mismatches: 9, all mismatches: 9, alignment length: 260, cluster length: 122, total number of As: 26 Locations in RNA: 84 113 114 118 123 163 166 204 205 Locations in genome: 152507608 152507579 152507578 152507574 152507569 152507529 152507526 152507488 152507487 Upstream nucleotide (in genome): a t a g t t t c a Upstream nucleotide summary: a: 3, c: 1, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g a c g c g g a c Downstream nucleotide summary: a: 2, c: 3, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 1, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr6:152507432-152507691 (-) gacacagagctgctctcttgttgcccaggctggagtgcaatggtgtgatctcggctcaccgcagactccacctcctgggtacaagtgattctcttgcctcagcctcccgagtaactgagattacaggcatgtgccaccacgccctgtaaattttgtatttttagtagagacagggtttctccatgttggtcaggctggtctccaactcccgaccccaggtgatctgcccacctcagcctcccaaagtgctgagatgacag >F03185:1-260 (+) gacacagagctgctctcttgttgcccaggctggagtgcaatggtgtgatctcggntcaccgcagactccacctcctgggtacaggtgattctcttgcctcagcctcccgagtggctgggattgcaggcatgtgccaccacgccctgtaaattttgtatttttggtggagacagggtttctccatgttggtcaggctggtctccggctcccgaccccaggtgatctgcccacctcagcctcccaaagtgctgagatgacag End editing Edited EST: T55673, type: ag Aligns to: chr6:136809603-136809892 (-+) All mismatches: ag (145), ag (171), ag (188), ag (213), ag (243), Editing mismatches: 5, all mismatches: 5, alignment length: 290, cluster length: 98, total number of As: 20 Locations in RNA: 145 171 188 213 243 Locations in genome: 136809747 136809721 136809704 136809679 136809650 Upstream nucleotide (in genome): t t g a a Upstream nucleotide summary: a: 2, c: 0, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g g g c g Downstream nucleotide summary: a: 0, c: 1, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr6:136809603-136809892 (-) gaagtacctagcggccaggcatggtggctcatgcctgtaatcccagcattttgggataccaaggcaggcagatcacgagatcaagagatcaagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattagctgggcgtggtggcgggtgcctgtagtcccagctactcgggaggctgaggcaggagaatcgcttaaacccaggaggcgg-aggttgcagtgagccaagatcgcaccaccactctccagcctggcaacagagcaagactccgtct >T55673:1-290 (+) gaagtacctagcggccaggcatggtggctcatg-ctgtaatcccagcattttgggataccaaggcaggcagatcacgagatcaagagatcaagaccatcctggccaacatggtgaaaccccatctctactaaaaatacaaaaattggctgggcgtggtggcgggtgcctgtggtcccagctactcggggggctgaggcaggagaatcgcttaagcccaggaggcggnaggttgcagtnagccaggatcgcaccaccactctccagcctggcaacagagcaagactccgtct End editing Edited EST: DA221574, type: ag Aligns to: chr6:42265712-42266246 (-+) All mismatches: ag (122), ag (171), ag (177), ag (180), ag (213), ag (216), ag (245), ag (251), ag (256), ag (257), ag (291), Editing mismatches: 11, all mismatches: 11, alignment length: 535, cluster length: 170, total number of As: 51 Locations in RNA: 122 171 177 180 213 216 245 251 256 257 291 Locations in genome: 42266125 42266076 42266070 42266067 42266034 42266031 42266002 42265996 42265991 42265990 42265956 Upstream nucleotide (in genome): a t a t t a a c g a c Upstream nucleotide summary: a: 5, c: 2, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g c a a t t g c a c t Downstream nucleotide summary: a: 3, c: 3, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 1, ca: 0, cc: 1, cg: 0, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 1, other: 0 >chr6:42265712-42266246 (-) atctctttgtctctctgtgctgaactctgaataatttattcaaatctatcttctggccgggggaatagctcatacctgtaatcccagcactttgggaggccttggtgggtggatcacctgaagtcagaagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaataaaaaaattggccaggtgtggtggcgcgcacctataatcccagctactctggaggctgaggcacaagaatcacttgaaccctggaggtggaggttgctgtgagttgagaccataccactgcactccagcctgggtgacagagccagactttgtctcaaaaaaaacaaaaacaaaaacaaaaacaaaaaaaaacaacaactatcttctatttaactaatttattatgtgtctaaaatgctctttaacccattcattggattttttctttttgctttatttatttgtcatttctagaagttctgcttggtgatttttctggtctctcatttcttgctcatatttgaagatgtttattt >DA221574:1-535 (+) atctctttgtctctctgtgctgaactctgaataatttattcaaatctatcttctggccgggggaatagctcatacctgtaatcccagcactttgggaggccttggtgggtggatcacctgaggtcagaagttcaagaccagcctggccaacatggtgaaaccccatctctgctaaagatgaaaaaattggccaggtgtggtggcgcgcacctgtagtcccagctactctggaggctgaggcacaggaatcgcttgggccctggaggtggaggttgctgtgagttgagaccgtaccactgcactccagcctgggtgacagagccagactttgtctcaaaaaaaacaaaaacaaaaacaaaaacaaaaaaaaacaacaactatcttctatttaactaatttattatgtgtctaaaatgctctttaacccattcattggattttttctttttgctttatttatttgtcatttctagaagttctgcttggtgatttttctggtctctcatttcttgctcatatttgaagatgtttattt End editing Edited EST: DW410831, type: ag Aligns to: chr6:86344547-86344862 (-+) All mismatches: ag (82), ag (83), ag (108), ag (128), ag (141), ag (144), ag (145), ag (208), ag (212), ag (213), ag (311), Editing mismatches: 11, all mismatches: 11, alignment length: 316, cluster length: 230, total number of As: 49 Locations in RNA: 82 83 108 128 141 144 145 208 212 213 311 Locations in genome: 86344797 86344796 86344771 86344751 86344738 86344735 86344734 86344671 86344667 86344666 86344568 Upstream nucleotide (in genome): c a t t g t a c t a t Upstream nucleotide summary: a: 3, c: 2, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): a t g c c a t a a t c Downstream nucleotide summary: a: 4, c: 3, g: 1, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 3, ca: 2, cc: 0, cg: 0, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 2, tc: 2, tg: 1, tt: 0, other: 0 >chr6:86344547-86344862 (-) cacccacgctggagtgtgtgggcatgatcttggctcactgtaatctctgcctcctgggctcaggcaattctcctgcctcagccacccgagtagctgggataataggcgcgtaccaccacacctgactaatttttgtatatttggtagagatggggttatgttggccaggccggtcttgaactccagacctcaagtaatctgcccgccttggcctcccaaagtgctgggatgacaggcatgagccactgtgcctggcaggttggtcttgaactcatggtctcaagcagtcctcctacctcggcttcccaaagtgcaa >DW410831:17-332 (+) cacccacgctggagtgtgtgggcatgatcttggctcactgtaatctctgcctcctgggctcaggcggttctcctgcctcagccacccgagtggctgggataataggcgcgtgccaccacacctggctggtttttgtatatttggtagagatggggttatgttggccaggccggtcttgaactccagacctcgagtggtctgcccgccttggcctcccaaagtgctgggatgacaggcatgagccactgtgcctggcaggttggtcttgaactcatggtctcaagcagtcctcctgcctcggcttcccaaagtgcaa End editing Edited EST: BM687079, type: ag Aligns to: chr6:24471355-24471782 (-+) All mismatches: ag (163), ag (169), ag (176), ag (183), ag (184), ag (233), ag (234), ag (241), ag (286), cg (305), ag (311), ag (312), Editing mismatches: 11, all mismatches: 12, alignment length: 428, cluster length: 150, total number of As: 31 Locations in RNA: 163 169 176 183 184 233 234 241 286 311 312 Locations in genome: 24471628 24471622 24471615 24471608 24471607 24471558 24471557 24471550 24471505 24471480 24471479 Upstream nucleotide (in genome): a c c a a t a g a c a Upstream nucleotide summary: a: 6, c: 3, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): a a g a t a g g g a g Downstream nucleotide summary: a: 5, c: 0, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 3, at: 1, ca: 2, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr6:24471355-24471782 (-) cccagaatgatttatcaatagtctcccctttccttgctgatctacaataccttctctgttttggttttctgtttctttctgtctttttttttgagccagtctaactctgtggctcgggctggagtgcagtggtgtgtgatcttgggtcactgcaaactccaacttccaggcccaaatgatcctcccacctcagcctccacctggctaattttttaatgttttgtaagagatgaggtcttgccatgttgcccaggctggtctcgaactcctgggctcaagtgatccgcccaccttggcctcccaagtgttgggattataggtgtgagccactgcaccccctttgggttataaattaaaatgttatgtatatgtatgggtcagtttctgggctttctgatatgtccttttggtccctgaacaatattgat >BM687079:9-436 (+) cccagaatgatttatcaatagtctcccctttccttgctgatctacaataccttctctgttttggttttctgtttctttctgtctttttttttgagccagtctaactctgtggctcgggctggagtgcagtggtgtgtgatcttgggtcactgcagactccgacttccgggcccaggtgatcctcccacctcagcctccacctggctaattttttaatgttttgtgggagatggggtcttgccatgttgcccaggctggtctcgaactcctgggctcaggtgatccgcccaccttgggctcccgggtgttgggattataggtgtgagccactgcaccccctttgggttataaattaaaatgttatgtatatgtatgggtcagtttctgggctttctgatatgtccttttggtccctgaacaatattgat End editing Edited EST: BG429924, type: ag Aligns to: chr6:134536850-134536998 (-+) All mismatches: ag (1), ag (7), ag (10), ag (55), ag (101), ag (103), ag (135), ag (143), ag (146), Editing mismatches: 9, all mismatches: 9, alignment length: 149, cluster length: 146, total number of As: 30 Locations in RNA: 1 7 10 55 101 103 135 143 146 Locations in genome: 134536998 134536992 134536989 134536944 134536898 134536896 134536864 134536856 134536853 Upstream nucleotide (in genome): n t t c t c t t t Upstream nucleotide summary: a: 0, c: 2, g: 0, t: 6, other: 1 Downstream nucleotide (in genome): t g g g c g t g g Downstream nucleotide summary: a: 0, c: 1, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 4, tt: 1, other: 1 >chr6:134536850-134536998 (-) atttttagtagagacgtagtttctccatgttggtcaggctggtctcgaactcccagcctcaggtgatccacctgcctcagcctcccaaagtgctgggattacaggcgtgagccaccacgcctggcctaatttttatatttttagtagag >BG429924:1-149 (+) gtttttggtggagacgtagtttctccatgttggtcaggctggtctcgaactcccggcctcaggtgatccacctgcctcagcctcccaaagtgctgggattgcgggcgtgagccaccacgcctggcctaatttttgtatttttggtggag End editing Edited EST: BF062263, type: ga Aligns to: chr6:100524111-100524281 (-+) All mismatches: ga (100), ga (116), ga (159), ga (168), ga (170), ga (171), Editing mismatches: 6, all mismatches: 6, alignment length: 172, cluster length: 71, total number of Gs: 21 Locations in RNA: 100 116 159 168 170 171 Locations in genome: 100524182 100524166 100524123 100524115 100524113 100524112 Upstream nucleotide (in genome): a a a t t g Upstream nucleotide summary: a: 3, c: 0, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g a g t g a Downstream nucleotide summary: a: 2, c: 0, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 1, other: 0 >chr6:100524111-100524281 (-) taagtttatttatttaatgttgaagatcatggaacaaaatatgaatatccagatatcttttactgctaaagaagcttctgctgcctggtgttctcatgagggtcttctgttgttagagggttgttttagcggttgtttacttccttactgacaaaatagggaacct-gtgga >BF062263:1-172 (+) taagtttatttatttaatgttgaagatcatggaacaaaatatgaatatccagatatcttttactgctaaagaagcttctgctgcctggtgttctcatgaaggtcttctgttgttaaagggttgttttagcggttgtttacttccttactgacaaaataaggaaccttataaa End editing Edited EST: CA334881, type: ga Aligns to: chr7:73515057-73515364 (-+) All mismatches: ga (296), ga (298), ga (300), ga (302), ga (304), ga (308), Editing mismatches: 6, all mismatches: 6, alignment length: 308, cluster length: 13, total number of Gs: 6 Locations in RNA: 296 298 300 302 304 308 Locations in genome: 73515069 73515067 73515065 73515063 73515061 73515057 Upstream nucleotide (in genome): a a a a a a Upstream nucleotide summary: a: 6, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a n Downstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 1 Dinucleotide summary: aa: 5, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr7:73515057-73515364 (-) ccgggcgtggtggctcatgcctgtaatcgcagcactttgggaggccgagacgggcggatcacgaggtcaggagatcgagaccatcctgcctaatatggtgaaaccctgtctctactaaatataaaaaaaaaattagccgggcatggtggcaggtgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccaggaggcggggcttgcagtgagccgagaccacaccactgcactccagcctgggcgacagagcgagactccgtctcgaaaaaaaaaaaaagagagagagaaag >CA334881:1-308 (+) ccgggcgtggtggctcatgcctgtaatcgcagcactttgggaggccgagacgggcggatcacgaggtcaggagatcgagaccatcctgcctaatatggtgaaaccctgtctctactaaatataaaaaaaaaattagccgggcatggtggcaggtgcctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccaggaggcggggcttgcagtgagccgagaccacaccactgcactccagcctgggcgacagagcgagactccgtctcgaaaaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: BX504025, type: ag Aligns to: chr7:30502192-30502567 (-+) All mismatches: ga (10), ag (18), ag (43), ag (67), ag (104), ag (116), ag (142), ag (176), ag (187), ag (248), ag (255), ag (264), Editing mismatches: 11, all mismatches: 12, alignment length: 377, cluster length: 247, total number of As: 48 Locations in RNA: 18 43 67 104 116 142 176 187 248 255 264 Locations in genome: 30502551 30502526 30502502 30502465 30502453 30502427 30502393 30502382 30502321 30502314 30502305 Upstream nucleotide (in genome): c a a c t g c a a t a Upstream nucleotide summary: a: 5, c: 3, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): c t c g g t g t a g g Downstream nucleotide summary: a: 1, c: 2, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 1, at: 2, ca: 0, cc: 1, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr7:30502192-30502567 (-) tttgagat-ggagtctcactctgtcacccaggctggagtgcaatggtacgatcttggctcgctgcaacctccgcctcccggattcaaccaattctcctgcctcagcctccctagtagctgggattacaggtgtgcaccacgatgccctgctaatttttgtatttttcgtggagacagggtttcacaatgttggccaggctggtctcgaactcctggcctcaagtgatccacctgccttggcctcccaaagtgctaggattacaagcgtgagccactgcacccagccctaagtactcttttgagtctggcttctctcactcagtgtagtatctgtgacactcattcatgatggattcttgtttcattggcatttattg >BX504025:1-377 (+) tttgagatgagagtctcgctctgtcacccaggctggagtgcagtggtacgatcttggctcgctgcagcctccgcctcccggattcaaccaattctcctgcctcggcctccctagtggctgggattacaggtgtgcaccacggtgccctgctaatttttgtatttttcgtggagacggggtttcacagtgttggccaggctggtctcgaactcctggcctcaagtgatccacctgccttggcctcccagagtgctgggattacaggcgtgagccactgcacccagccctaagtactcttttgagtctggcttctctcactcagtgtagtatctgtgacactcattcatgatggattcttgtttcattggcatttattg End editing Edited EST: DW433382, type: ag Aligns to: chr9:74434570-74434731 (-+) All mismatches: ag (163), ag (164), ag (168), ag (190), ag (203), ag (205), ag (249), ag (256), Editing mismatches: 8, all mismatches: 8, alignment length: 163, cluster length: 94, total number of As: 21 Locations in RNA: 163 164 168 190 203 205 249 256 Locations in genome: 74434669 74434668 74434664 74434642 74434629 74434627 74434583 74434576 Upstream nucleotide (in genome): c a a a t c t g Upstream nucleotide summary: a: 3, c: 2, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): a g t g c g g g Downstream nucleotide summary: a: 1, c: 1, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 1, ca: 1, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr9:74434570-74434731 (-) att-tcagtgcaggcttgagtgcagcggctcgatccctgcttactgcaaccacctccgggttcaagcaattctcctgcctcagcctcccaagtagctgggattacaggcgcgtgtcaccacgtccggctaatttttttgtatttttagtagagatgaggcttc >DW433382:100-262 (+) attctcagtgcaggcttgagtgcagcggctcgatccctgcttactgcaaccacctccgggttcgggcagttctcctgcctcagcctcccaggtagctgggattgcgggcgcgtgtcaccacgtccggctaatttttttgtatttttagtggagatggggcttc End editing Edited EST: CB267040, type: ag Aligns to: chr9:131070532-131070966 (-+) All mismatches: ag (229), ag (297), ag (318), ag (343), ag (358), ag (367), ag (398), ag (401), ag (410), ag (412), Editing mismatches: 10, all mismatches: 10, alignment length: 434, cluster length: 184, total number of As: 35 Locations in RNA: 229 297 318 343 358 367 398 401 410 412 Locations in genome: 131070737 131070669 131070648 131070623 131070608 131070599 131070568 131070565 131070556 131070554 Upstream nucleotide (in genome): c c t t c g a t t c Upstream nucleotide summary: a: 1, c: 4, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): g g g g a c g c c g Downstream nucleotide summary: a: 1, c: 3, g: 6, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 1, cc: 0, cg: 3, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 2, tg: 2, tt: 0, other: 0 >chr9:131070532-131070966 (-) agccaccgcacctggccgggacctcagtcttttctcttaaaggtcttcagtttattgaatgagctccgcccacaattgtggtggataatcagcgtgactcaaagtctacccattgactgattgaaatgttaatcatttttttgtttttgtttttgtttttgagacttgctttgtggcccaggctggagtgcagtggtgcgatctaggctcactgcaacctccgcttcccaggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggtgcccaccaccacgcccagctaatttttttgtatttttagtagagacggtgttgcaccgtgttagccaggatggtctcaatctcctgacctcgtgatccgcctggcttggcctcccaaagtactgggattacagccgtgagccaccacacccggc >CB267040:1-434 (+) agcc-ccgcacctggccgggacctcagtcttttctcttaaaggtcttcagtttattgaatgagctccgcccacaattgtggtggataatcagcgtgactcaaagtctacccattgactgattgaaatgttaatcatttttttgtttttgtttttgtttttgagacttgctttgtggcccaggctggagtgcagtggtgcgatctaggctcactgcaacctccgcttcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggtgcccaccaccacgcccggctaatttttttgtatttttggtagagacggtgttgcaccgtgttggccaggatggtctcgatctcctggcctcgtgatccgcctggcttggcctcccaaggtgctgggattgcggccgtgagccaccacacccggc End editing Edited EST: BX119899, type: ag Aligns to: chrX:135924184-135924754 (-+) All mismatches: ag (438), ag (455), ag (468), ag (478), ag (496), ag (498), ag (514), ag (522), ag (523), ag (530), Editing mismatches: 10, all mismatches: 10, alignment length: 569, cluster length: 93, total number of As: 21 Locations in RNA: 438 455 468 478 496 498 514 522 523 530 Locations in genome: 135924351 135924334 135924321 135924311 135924293 135924291 135924275 135924267 135924266 135924259 Upstream nucleotide (in genome): t t t t a g c t a c Upstream nucleotide summary: a: 2, c: 2, g: 1, t: 5, other: 0 Downstream nucleotide (in genome): g g g c g g g a g g Downstream nucleotide summary: a: 1, c: 1, g: 8, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 3, tt: 0, other: 0 >chrX:135924184-135924754 (-) cttaattcctctttgccatgtatcataagatatatacaggttccaaagattaagatgtagacatctttgggtggccattattctgcctaccacacacaatatgtcctctgactgtaatggaaccaaactggaaatcagtaatagaaatacataccaccacgcctggctaattttatttttgtagagatggggtctcgctgctcaggccagtctggagctcctgggcttatgtgatcctcttgccttggcatcccaaagtggtgggattataggcatgaaccactgcacccggcttaatttacgttttatagtgtgcaattcaatgttttgggtttttttttctttttaaagcatatttacagagttgtgcaaccgtcaccactatctaacttaagaatattttagccaggcatggtaggtagcacgtgcctgtagtccatgctacttgggaggctgaggcaagaggattgctcgagcccaggaggttaaggctgcagtgagctatgatcacacccactgtacgtcagtctgcttgacagagtgagaccttgtttcaaaaaaaaaaaataaa >BX119899:36-604 (+) cttaattcctctttgcc-tgtatcataagatatatacaggttccaaagattaagatgtagacatctttgggtggccattattctgcctaccacacacaatatgtcctctgactgtaatggaaccaaactggaaatcagtaatagaaatacataccaccacgcctggctaattttatttttgtagagatggggtctcgctgctcaggccagtctggagctcctgggcttatgtgatcctcttgccttggcatcccaaagtggtgggattataggcatgaaccactgcacccggcttaatttacgttttatagtgtgcaattcaatgttttgggtttttttttctttttaaagcatatttacagagttgtgcaaccgtcaccactatctaacttaagaatattttggccaggcatggtaggtggcacgtgcctgtggtccatgctgcttgggaggctgaggcagggggattgctcgagcccgggaggttggggctgcggtgagctatgatcacacccactgtacgtcagtctgcttgacagagtgagaccttgtttcaaaaaaaaaaaa-aaa End editing Edited EST: N39345, type: ag Aligns to: chr10:70047603-70047791 (--) All mismatches: ag (135), ag (166), ag (172), ag (215), ag (228), ag (261), ag (304), ag (307), Editing mismatches: 8, all mismatches: 8, alignment length: 189, cluster length: 173, total number of As: 37 Locations in RNA: 135 166 172 215 228 261 304 307 Locations in genome: 70047611 70047642 70047648 70047692 70047705 70047738 70047780 70047783 Upstream nucleotide (in genome): c t t t c c a t Upstream nucleotide summary: a: 1, c: 3, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a g g c g g c g Downstream nucleotide summary: a: 1, c: 2, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 0, ca: 1, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr10:70047603-70047791 (-) cccaggctagaacggagtggcatgatccc-ggctcactgcaacctcagcctcccaggttcaagtgattctcctgccttggcctccccagtagctggaactacaggcgtctgccactacacccggctaatttttgtatttttactagagataggatttcatcatgttggccaggatggtcccaaactcctg >N39345:127-315 (-) cccaggctggagcggagtggcatgatcccnggctcactgnaacctcagcctcccgggttcaagtgattctcctgccttggcctccccggtagctggaactgcag-cgtctgccactacacccggctaatttttgtatttttactggagatgggatttcatcatgttggccaggatggtcccgaactcctg End editing Edited EST: W45283, type: ag Aligns to: chr10:99245085-99245407 (--) All mismatches: ag (163), ag (170), ag (176), ag (205), ag (206), ag (207), Editing mismatches: 6, all mismatches: 6, alignment length: 324, cluster length: 45, total number of As: 18 Locations in RNA: 163 170 176 205 206 207 Locations in genome: 99245245 99245252 99245258 99245287 99245288 99245289 Upstream nucleotide (in genome): a t c a a c Upstream nucleotide summary: a: 3, c: 2, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): t c t a a a Downstream nucleotide summary: a: 3, c: 1, g: 0, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 1, ca: 1, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr10:99245085-99245407 (-) cattgtaaagccctatctctactaaaaatacaaaaattagggccaggtgcagtggctcatgcctgtaatcccagcactttgggaggccaaggcgggcggatcacgaggtcaggagttcaaaaccagcctggccaacatggcaaaaccccatctctactgaaaatacaaaaattagccaggcgtggtggtgggcacctgtaatcccagctacttgggagactgaggcagaagaattgcttgaacccgggaggcggaggttgcagtgagccaagatcataccattgcactccagcctgggtaacgagagcaagactcc-atctcaa >W45283:2-325 (-) cattgtaaagccctatctctactaaaaatacaaaaattagggccaggtgcagtggctcatgcctgtaatcccagcactttgggaggccaaggcgggcggatcacgagntcaggagttcgggaccagcctggccaacatggcaaaaccccgtctctgctgaaagtacaaaaattagccaggcgtggtggtgggcacctgtaatcccagctacttgggagactgaggcagaagaattgcttgaacccgggaggcggaggttgcagtgagccaagatcataccattgcactccagnctgggtaacgagagcaagactccnatctcaa End editing Edited EST: DB302734, type: ag Aligns to: chr10:14323009-14323566 (--) All mismatches: ag (46), ag (52), ag (56), ag (76), ag (86), ag (95), ag (112), ag (116), ag (121), ga (132), ag (186), ag (187), Editing mismatches: 11, all mismatches: 12, alignment length: 558, cluster length: 142, total number of As: 39 Locations in RNA: 46 52 56 76 86 95 112 116 121 186 187 Locations in genome: 14323054 14323060 14323064 14323084 14323094 14323103 14323120 14323124 14323129 14323194 14323195 Upstream nucleotide (in genome): c c g c c c t c a a c Upstream nucleotide summary: a: 2, c: 7, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): c a g g c g c g t c a Downstream nucleotide summary: a: 2, c: 4, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 1, ca: 2, cc: 2, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr10:14323009-14323566 (-) agttgtgttagtttgctagggctgccataataaagtaccacagactggcaggcttaaacaataggaattcatgttctcacagtcctggtggctgcaagtctgagatcaatgttatcagcagggttggtttcttccaaggccttgatccttgccttgcggcataaacagcaattacttttgcaccaacccaattgatggctgtcttccctgtgtctttatgtagtcttcctgctgtaccagtctgtgccctaatttcttcttcttaaagcaaaaccaggctgggtgtggtggctcacgtctgtaatcccagcactttgggaggccaaggctggcagatcacttgagttcaggagctcgagaccaggctgaccaacacggagaaaccctgcttctactaaaaatacaaaattagctgggtgtggtggtgtgctcctgtaatctcagctacttggggggctgaggcaggagaatcacttgaacccaggaggtggaggttgtggtgagccaagatcacgccattgcactccagcctgggcaacaagatcgaaactccgttgc >DB302734:1-558 (-) agttgtgttagtttgctagggctgccataataaagtaccacagactggcaggcttaaacaataggaattcatgttctcacagtcctggtggctgcaagtctgagatcaatgttatcagcagggttggtttcttccaaggccttgatccttgccttgcggcataaacagcaattacttttgcaccaacccaattgatggctgtcttccctgtgtctttatgtagtcttcctgctgtaccagtctgtgccctaatttcttcttcttaaagcaaaaccaggctgggtgtggtggctcacgtctgtaatcccagcactttgggaggccaaggctggcagatcacttgagttcaggagctcgagaccaggctgaccggcacggagaaaccctgcttctactaaaaatacaaaattagctgggtgtggtggtatgctcctgtagtctcggctgcttggggggctgaggcgggagaatcgcttgaacccgggaggtggaggttgtggtgggccgagatcgcgccattgcactccagcctgggcaacaagatcgaaactccgttgc End editing Edited EST: BX504043, type: ag Aligns to: chr10:69743262-69743631 (--) All mismatches: ag (46), ag (86), ag (106), ag (108), ag (111), ag (161), ag (220), ag (281), Editing mismatches: 8, all mismatches: 8, alignment length: 370, cluster length: 236, total number of As: 37 Locations in RNA: 46 86 106 108 111 161 220 281 Locations in genome: 69743307 69743347 69743367 69743369 69743372 69743422 69743481 69743542 Upstream nucleotide (in genome): c t g t t c a g Upstream nucleotide summary: a: 1, c: 2, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): c g g g g c g g Downstream nucleotide summary: a: 0, c: 2, g: 6, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 2, cg: 0, ct: 0, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 0, tg: 3, tt: 0, other: 0 >chr10:69743262-69743631 (-) tctgctgcttcagcctcctgagtagctgggattgcaggcgtacaccaccacacccagttaatttttgtatttttttttttttttttttgagacagagtcttcctctgttgcccaggctggagtgcagtggtgcgatcttggctcactgcaagctccgcctcctgggttcatgctgttctcctgcctcagcctcccgagcagctgggaccacaggcgcctgccatcacacctggctaatttttttttattttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctctatctcctgaccttgtgatccgcccacctcagcatcccaaagtgctgggattacaggcacaagccactgca >BX504043:1-370 (-) tctgctgcttcagcctcctgagtagctgggattgcaggcgtacaccaccacacccagttaatttttgtatttttttttttttttttttgggacagagtcttcctctgttgcccaggctggagtgcagtggtgcgatcttggctcactgcaggctccgcctcctgggttcatgctgttctcctgcctcagcctcccgagcagctgggaccgcaggcgcctgccatcacacctggctaatttttttttattttgtatttttggtggggacggggtttcaccgtgttggccaggatggtctctatctcctgaccttgtgatccgcccgcctcagcatcccaaagtgctgggattacaggcacaagccactgca End editing Edited EST: AI254121, type: ag Aligns to: chr10:94046046-94046358 (--) All mismatches: ag (126), ag (146), ag (152), ag (161), ag (197), ag (209), ag (216), Editing mismatches: 7, all mismatches: 7, alignment length: 313, cluster length: 91, total number of As: 22 Locations in RNA: 126 146 152 161 197 209 216 Locations in genome: 94046159 94046179 94046185 94046194 94046230 94046242 94046249 Upstream nucleotide (in genome): c t t t t c c Upstream nucleotide summary: a: 0, c: 3, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t g t a g g t Downstream nucleotide summary: a: 1, c: 0, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 1, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 2, tt: 1, other: 0 >chr10:94046046-94046358 (-) ttttttttttttttttttagatagagtcttgctctgctgcccaggctggagtgcagtggtgccatctcagctcactgcaacctcccactcccaggttcaagagattctcatgcctcagccacctgagtaggtgggatcacaggcatgcatcaccacgcccagctaatttttgtatttttagtagagatgaggtttctccatgttgcccaggctggtcttgaactcctgacctcaagtgatccacttgccttggcctcccaaagtgctgagattgcaggcatgagccactgtgcctggcctatagctacccttc >AI254121:13-325 (-) ttttttttttttttttttagatagagtcttgctctgctgcccaggctggagtgcagtggtgccatctcagctcactgcaacctcccactcccaggttcaagagattctcgtgcctcggccacctgagtgggtgggatcacaggcatgcatcaccacgcccagctgatttttgtgtttttggtagagatgaggtttctccgtgttgcccaggctggtcttgaactcctgacctcaagtgatccacttgccttggcctcccaaagtgctgagattgcaggcatgagccactgtgcctggcctatagctacccttc End editing Edited EST: DW422721, type: ag Aligns to: chr11:66710927-66711212 (--) All mismatches: ag (47), ag (125), ag (131), ag (134), ag (140), tc (144), ag (181), ag (193), ag (197), ag (223), ag (289), Editing mismatches: 10, all mismatches: 11, alignment length: 285, cluster length: 244, total number of As: 45 Locations in RNA: 47 125 131 134 140 181 193 197 223 289 Locations in genome: 66710965 66711043 66711049 66711052 66711058 66711100 66711112 66711116 66711142 66711208 Upstream nucleotide (in genome): a c t t c t t c c t Upstream nucleotide summary: a: 1, c: 4, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): g g g g t c g a t t Downstream nucleotide summary: a: 1, c: 1, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 1, cc: 0, cg: 1, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 3, tt: 1, other: 0 >chr11:66710927-66711212 (-) ctctatagcccaggctggagagcagtggcgcgatctctgctcaccacaagctccgctgcttcccgggttcatgccattctcctgcctcagcctcccaagtagctgggggactacaggcgcctgccaccacgcccggcaaattttttttttttgcatttttagtagagacagggttccatcgtgttagccaggatggtctcaatctcctgacctcatgatcctcatgatccgggcctcggcctcccaaagtgttgggattacaggcgtgagccaccgcacccggccg >DW422721:9-293 (-) ctctgtagcccaggctggagagcagtggcgcgatctctgctcaccacaagctccgctgcttcccgggttcgtgccattctcctgcctcagcctcccgagtggctgggggactgcaggcgcctgccaccacgcccggcaaa-tttttttttctgcgtttttggtggagacggggttccatcgtgttagccaggatggtctcaatctcctgacctcatgatcctcatgatccgggcctcggcctcccaaggtgttgggattacaggcgtgagccaccgcacccggccg End editing Edited EST: BF062422, type: ga Aligns to: chr11:403617-403771 (--) All mismatches: ga (112), ga (120), ga (141), ga (151), ga (154), ga (157), ga (168), ga (170), Editing mismatches: 8, all mismatches: 8, alignment length: 155, cluster length: 59, total number of Gs: 26 Locations in RNA: 112 120 141 151 154 157 168 170 Locations in genome: 403686 403694 403715 403725 403728 403731 403742 403744 Upstream nucleotide (in genome): t g t g t g a c Upstream nucleotide summary: a: 1, c: 1, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): a c a c a a a a Downstream nucleotide summary: a: 6, c: 2, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 1, gc: 2, gg: 0, gt: 0, ta: 3, tc: 0, tg: 0, tt: 0, other: 0 >chr11:403617-403771 (-) acatctcgtccttgttcctagcgttccgagacaggtttcggatgaggccagtcagtgagcgcagctggtggtggtcggcggtcctgacacggtctagcagggggttcagaatacgctcctgctccagggccaggcggctcagcacccccgcccac >BF062422:43-197 (-) acatctcgtccttgttcctagcgttccaaaacaggtttcgaataagaccagtcagtaagcgcagctggtggtggtcgacggtcctaacacggtctagcagggggttcagaatacgctcctgctccagggccaggcggctcagcacccccgcccac End editing Edited EST: H72495, type: ga Aligns to: chr12:66734752-66735198 (--) All mismatches: ga (390), ga (410), ga (429), ga (435), ga (440), ga (444), Editing mismatches: 6, all mismatches: 6, alignment length: 448, cluster length: 54, total number of Gs: 22 Locations in RNA: 390 410 429 435 440 444 Locations in genome: 66735141 66735161 66735179 66735185 66735190 66735194 Upstream nucleotide (in genome): a a a a a a Upstream nucleotide summary: a: 6, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): t t a t t t Downstream nucleotide summary: a: 1, c: 0, g: 0, t: 5, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 5, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr12:66734752-66735198 (-) tggagtcagtggagtgggag-aggaagacccaccctcagtgtgggtgggcaccatcgagttggctgc-cagtgaggctagaacacagcaggtggacgaatggagataagcagcgtgcttgctgagtctgctccctctctttcttcctgtgctgtgcagaatgcttgacttcctctccttctgcccttggacaccagactccaggtttttccacctttggactctgggacttgcaccaattgcttcccagaggct-cctgggcctttggcctcagactgagggctgcactgtcagcgtccctggttttgaggctttcagacttggactgagccatgctatcagcttctctccttccccagcttgcagatggcctatcgtgggactttgctttataatcgtgtgagccaattctctcttattgtgatggttaatactgagtgtcaacttgat >H72495:1-448 (-) tggaatcaatggaatgggaanaggaagacccaccctcaatgtgggtgggcaccatcgaattggctgcncagtgaggctagaacacagcaggtggacgaatggagataagcagcgtgcttgctgagtctgctccctctctttcttcctgtgctgtgcagaatgcttgacttcctctccttctgcccttggacaccagactccaggtttttccacctttggactctgggacttgcaccaattgcttcccagaggctncctgg-c-tttggcctcagactgagggctgcactgtcagcgtccctggttttgaggctttcagacttggactgagccatgctatcagcttctctccttccccagcttgcagatggcctatcgtgggactttgctttataatcgtgtgagccaattctctcttattgtgatggttaatactgagtgtcaacttgat End editing Edited EST: DW412759, type: ag Aligns to: chr12:80019673-80019965 (--) All mismatches: ag (9), ag (59), ag (110), ag (155), ag (165), ag (177), ag (263), ag (275), ag (276), Editing mismatches: 9, all mismatches: 9, alignment length: 295, cluster length: 269, total number of As: 45 Locations in RNA: 9 59 110 155 165 177 263 275 276 Locations in genome: 80019675 80019726 80019777 80019822 80019832 80019844 80019930 80019942 80019943 Upstream nucleotide (in genome): c c t t t c c a t Upstream nucleotide summary: a: 1, c: 4, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t t g c g g c g a Downstream nucleotide summary: a: 1, c: 2, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 1, cg: 1, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr12:80019673-80019965 (-) tttttttttt-ttt-ttttttttt-aagatggagtctcactctgtagcccaggctggagtgcagtggcacgatcttggctcactgcaagctccgcctcccgggttcactccattctcctgcctcagcctcccgagtagctgggactacaggcgcgtgccaccacgcctggctagttttttgtatttttagtagagatggggtttcactgtgttagccaggatggtctcgatctcctgacctcatgatccgcctgcctcggactcccaatgtgctgaaccactgtgcccggcccata >DW412759:7-301 (-) ttttttttttgtttatttttttttcgggatggagtctcgctctgtagcccaggctggagtgcagtggcacgatcttggctcactgcaagctccgcctcccgggttcactccattctcctgcctcggcctcccgagtggctgggactgcaggcgcgtgccaccacgcctggctagttttttgtatttttagtggagatggggtttcactgtgttagccaggatggtctcgatctcctgacctcgtgatccgcctgcctcggactcccaatgtgctgaaccactgtgcccggcc-gta End editing Edited EST: DW424315, type: ag Aligns to: chr12:121832972-121833258 (--) All mismatches: ag (3), ag (9), ag (49), ag (98), ag (102), ag (118), ag (127), ag (133), ag (143), ag (167), ag (265), Editing mismatches: 11, all mismatches: 11, alignment length: 289, cluster length: 261, total number of As: 50 Locations in RNA: 3 9 49 98 102 118 127 133 143 167 265 Locations in genome: 121832974 121832978 121833018 121833067 121833071 121833087 121833096 121833102 121833112 121833136 121833234 Upstream nucleotide (in genome): g c c c t c t t t c c Upstream nucleotide summary: a: 0, c: 6, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): c a g g g g g t a g g Downstream nucleotide summary: a: 2, c: 1, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 1, cc: 0, cg: 5, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 1, tc: 0, tg: 2, tt: 1, other: 0 >chr12:121832972-121833258 (-) agatggagtcttgctctgtcgcccaggctggagtgcagtgatgcaatctcagctcactgcaagctccacctccggggttcacgccattctcctgcctcagcctcctgggtagctgggactacaggcgcccaccaccacgccaggctaattttttgtatttttagtagagacagggtttcactgtgttagccaggatggtctcgatctcctgacctcgtgatccgccagtctcagcctcccagagtcctgggattacaggcgtgagccagcatgcccggcca-a-tgacc >DW424315:1-289 (-) agatggagtcttgctctgtcgcccgggctggagtgcagtgatgcaatctcagctcactgcaagctccacctccggggttcacgccattctcctgcctcagcctcctgggtagctgggactacgggcgcccaccaccacgccaggctgattttttgtgtttttggtagagacggggtttcactgtgttggccgggatggtctcgatctcctgacctcgtgatccgccagtctcagcctcccggagtcctgggattacaggcgtgagccagcatgcccggccgtaatggcc End editing Edited EST: BF847934, type: ag Aligns to: chr12:54808405-54808758 (--) All mismatches: ag (37), ag (51), ag (59), ag (62), ag (102), ag (105), ag (164), ag (221), ag (222), Editing mismatches: 9, all mismatches: 9, alignment length: 354, cluster length: 186, total number of As: 33 Locations in RNA: 37 51 59 62 102 105 164 221 222 Locations in genome: 54808441 54808455 54808463 54808466 54808506 54808509 54808568 54808625 54808626 Upstream nucleotide (in genome): t g t t a t a a g Upstream nucleotide summary: a: 3, c: 0, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): g g g g g c g g a Downstream nucleotide summary: a: 1, c: 1, g: 7, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 3, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr12:54808405-54808758 (-) gtttcgccatgttggtcaagctggtctcaaactcccgacctcaggtgatctgcctgtctcagcctcccaaagtgctgggattacaagcgtgagccaccacgcctggccgttgttgttgttgttgttgttgagaaggagtctcgctctgtctctggactggagtgtagtggcgtgatctcggctccctgcaagctccgcctcccaggttcatgccattctcctgcctcagcctccctagtaggtgggactacaagcgcccgccaccacgcccggataatttttttgtatttttagtagagacggagtttcaccatgttagccaggatggtctcgatctcctgacctcgtgatctg >BF847934:1-354 (-) gtttcgccatgttggtcaagctggtctcaaactcccgacctcaggtgatctgcctgtctcagcctcccaaagtgctgggattacaagcgtgagccaccacgcctggccgttgttgttgttgttgttgttgagggggagtctcgctctgtctctggactggagtgtagtggcgtgatctcggctccctgcaggctccgcctcccaggttcatgccattctcctgcctcagcctccctagtaggtgggactgcaggcgcccgccaccacgcccggataatttttttgtatttttggtggagacggggtttcaccatgttggccaggatggtctcgatctcctgacctcgtgatctg End editing Edited EST: AA321168, type: ag Aligns to: chr12:112106465-112106721 (--) All mismatches: ag (108), ag (112), ag (135), ag (141), ag (157), ag (161), ag (175), ag (191), ag (199), ag (216), ag (225), Editing mismatches: 11, all mismatches: 11, alignment length: 257, cluster length: 118, total number of As: 36 Locations in RNA: 108 112 135 141 157 161 175 191 199 216 225 Locations in genome: 112106572 112106576 112106599 112106605 112106621 112106625 112106639 112106655 112106663 112106680 112106689 Upstream nucleotide (in genome): c g t c t t a a c g c Upstream nucleotide summary: a: 2, c: 4, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): g g g c g g a a t g g Downstream nucleotide summary: a: 2, c: 1, g: 7, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 0, ca: 0, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 2, gt: 0, ta: 0, tc: 0, tg: 3, tt: 0, other: 0 >chr12:112106465-112106721 (-) actttgggaggttgagggtggatcacgaggtcaggagatcgagaccatcttggttaacatggtgaaaacccatctctactaaaaatacaaaaaattagctaggcgttgtggtgggcacctgtagtcccagctactcgggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagattgtgccactgcactccagcctgggcgacagagcgagactctgtctcaaaaaaaacaaatt >AA321168:1-257 (-) actttggnaggttnaggntggatcacgaggncggnagatcgggnccatcttggttaacgtggtgaagacccatctctactaagaatacaaaaaattggctggncgttgtggtgggcgcctgtggtcccagctactcgggaggctggggcgggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagattgtgccactgcactccagcctgggcgacagagcgagactctgtctcaaaaaaaacaaatt End editing Edited EST: AV734208, type: ag Aligns to: chr12:120606825-120607099 (--) All mismatches: ag (86), ag (102), ag (108), ag (119), ag (126), ag (154), Editing mismatches: 6, all mismatches: 6, alignment length: 275, cluster length: 69, total number of As: 15 Locations in RNA: 86 102 108 119 126 154 Locations in genome: 120606910 120606926 120606932 120606943 120606950 120606978 Upstream nucleotide (in genome): t c t t a t Upstream nucleotide summary: a: 1, c: 1, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g g g t t c Downstream nucleotide summary: a: 0, c: 1, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 1, other: 0 >chr12:120606825-120607099 (-) tttttttttttttttttttgagacggagtttcgctctgtcgcccaggctggagtgcagtggcgcgatctcgactcactgcaagctccgcctcctgcctcagccttccgagtggctgggactacaggcgctacgccgccacgcgcggctaattttttatatttttagtagagacagggtttcatcgtgttagccaggatggtctcaatctcctcaccttgtgatccacccacctcagcctcccaatgtgctgggattacaggcgtgagccactgcg >AV734208:1-275 (-) tttttttttttttttttttgagacggagtttcgctctgtcgcccaggctggagtgcagtggcgcgatctcgactcactgcaagctccgcctcctgcctcagccttccgagtggctgggactgcaggcgctacgccgccacgcgcggctagttttttgtatttttagtggagacggggtttcatcgtgttggccaggatggtctcaatctcctcaccttgtgatccacccacctcagcctcccaatgtgctgggattacaggcgtgagccactgcg End editing Edited EST: AV762848, type: ag Aligns to: chr12:57742889-57743176 (--) All mismatches: ag (32), ag (71), ag (86), ag (153), ag (163), ag (212), Editing mismatches: 6, all mismatches: 6, alignment length: 288, cluster length: 181, total number of As: 29 Locations in RNA: 32 71 86 153 163 212 Locations in genome: 57742920 57742959 57742974 57743041 57743051 57743100 Upstream nucleotide (in genome): a c t t t a Upstream nucleotide summary: a: 2, c: 1, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): a a g c g g Downstream nucleotide summary: a: 2, c: 1, g: 3, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 2, tt: 0, other: 0 >chr12:57742889-57743176 (-) ttttttttttttttggagacggagtctcgctctgtcggcaggttagagagcagtggcgagatctcggctcactgcaagctctgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgggactacaggcacctgccaccacgcccggctaattttttgtatttttagtagagtcggggtttcaccgtgttagccaggatggtctcaatctcctgacctcgtgatctgcccgcctcagcctcccaaagtggtgggactacaggcgtgagccaccatg >AV762848:1-288 (-) ttttttttttttttggagacggagtctcgctctgtcggcaggttagagagcagtggcgagatctcggctcactgcaggctctgcctcccgggttcacgccattctcctgcctcagcctcccgagtggctgggactgcaggcacctgccaccacgcccggctaattttttgtatttttagtagagtcggggtttcaccgtgttggccaggatggtctcgatctcctgacctcgtgatctgcccgcctcagcctcccagagtggtgggactacaggcgtgagccaccatg End editing Edited EST: CR743599, type: ag Aligns to: chr16:69359332-69359729 (--) All mismatches: ag (52), ag (119), ag (139), ag (143), ag (175), ag (195), Editing mismatches: 6, all mismatches: 6, alignment length: 399, cluster length: 143, total number of As: 24 Locations in RNA: 52 119 139 143 175 195 Locations in genome: 69359382 69359449 69359469 69359473 69359504 69359524 Upstream nucleotide (in genome): t t g t c t Upstream nucleotide summary: a: 0, c: 1, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): c g g g c g Downstream nucleotide summary: a: 0, c: 2, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr16:69359332-69359729 (-) ccatgaggacgcaggcccaacattacctaatttaatcttctagaagtcagaattctgaatttttatgtcaactctcgactttttttttttttttgagacagagtcttgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgtcccccgggttcacgccattctcctgcctcagcctcccaagtagctgggactgcaggcgcccaccaccacgcccggctaa-tttttttatttttagtgagacggggtttcactgtgttagccaggatgttctcgatttcctgaccttgtgatccgcccgcgtcggcctcccaaagtgctgggattacaggcgtgagccaccgcgcccagcaact-ctcgacttttaaatgttagcgg >CR743599:1-399 (-) ccatgaggacgcaggcccancattacctantttaatcttntagaagtcagaattctgaatttttatgtcanctctcgac-ttttttttttttttgagacagagtcttgctctgtcgcccaggctggagtgcagtggcgcgatctcggctcactgcaagctccgtccnccgggttcacgccattctcctgcctcagcctcccaagtggctgggactgcaggcgcccgccaccacgcccggctaattttttttatttttggtgggacggggtttcnctgtgttggccaggatgttctcgatttcctgaccttgtgatccgcccgcgtcggcctcccaaagtgctgggattgcaggcgtgagccaccgcgcccagcaactgctcgacttttaaatgttagcgg End editing Edited EST: BF850681, type: ag Aligns to: chr16:28210110-28210354 (--) All mismatches: ac (11), ag (105), ag (117), ag (118), ag (119), ag (132), ag (159), ag (182), ag (207), ag (236), ag (250), Editing mismatches: 10, all mismatches: 11, alignment length: 245, cluster length: 146, total number of As: 35 Locations in RNA: 105 117 118 119 132 159 182 207 236 250 Locations in genome: 28210208 28210220 28210221 28210222 28210235 28210262 28210285 28210310 28210339 28210353 Upstream nucleotide (in genome): t a a c c c c t t c Upstream nucleotide summary: a: 2, c: 5, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): c g a a c a c t c a Downstream nucleotide summary: a: 4, c: 4, g: 1, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 3, cc: 2, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 0, tt: 1, other: 0 >chr16:28210110-28210354 (-) caagtagctgggattacatgtgacaccacgcccggctaatttttatatttttaatagagatggggtttcaccaggttggccaggctggtctcaaactctcaacctcaggtgatccacccacctcggcctcccaaagtgctgggattacatgtgtgagccactgcgcctggccagatttatttattttaaatatgtaattttgagataatgtaagacttacggaagagttgcagaaatagtatagg >BF850681:7-251 (-) cgagtagctgggattgcatgtgacaccacgcccggctaatttttgtatttttaatagagatggggtttcgccaggttggccaggctggtctcgaactctcaacctcaggtgatccacccgcctcggcctcccggggtgctgggattgcatgtgtgagccactgcgcctggccagatttatttattttaaatatgtaattttgagataatgtaagacttacggaagagttgcagaaatagtctagg End editing Edited EST: BF674609, type: ag Aligns to: chr16:27491247-27491538 (--) All mismatches: ag (41), ag (85), ag (103), ag (107), ag (126), ag (137), ag (163), ag (199), Editing mismatches: 8, all mismatches: 8, alignment length: 291, cluster length: 160, total number of As: 26 Locations in RNA: 41 85 103 107 126 137 163 199 Locations in genome: 27491287 27491332 27491350 27491354 27491373 27491384 27491410 27491446 Upstream nucleotide (in genome): c t g t a c t c Upstream nucleotide summary: a: 1, c: 3, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g g c g t g g g Downstream nucleotide summary: a: 0, c: 1, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 3, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 0, tg: 3, tt: 0, other: 0 >chr16:27491247-27491538 (-) ttttttttttttttttgagatggagtctcaccccggccccccgggctggagtgcagtggcacactctcggctcactgcaagctccgcttcccaggttcacgtcattctcctgcctcagcctgcccagtagctgggactacaggcgcccgccaccaggcctggctaatttttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctggatctcctgacctcgtgatctgcccgtctcagcctcccaaagtgctgggattacaggcatgagccaccgca >BF674609:1-291 (-) ttttttttttttttttgagatggagtctcaccccggccccccgggctggagtgcagtggcacactctcggctcactgcaagctccgcttcccgggttcacgtcattctcctgcctcagcctgcccagtggctgggactacaggcgcccgccaccgggcctggctagtttttttgtatttttagtggaggcggggtttcaccgtgttg-ccaggatggtctggatctcctgacctcgtgatctgcccgtctcggcctcccaaagtgctgggattacaggcatgagccaccgca End editing Edited EST: BF681075, type: ag Aligns to: chr16:15171558-15171706 (--) All mismatches: ag (11), ag (19), ag (29), ag (55), ag (72), Editing mismatches: 5, all mismatches: 5, alignment length: 150, cluster length: 62, total number of As: 12 Locations in RNA: 11 19 29 55 72 Locations in genome: 15171568 15171576 15171586 15171612 15171629 Upstream nucleotide (in genome): c t t c c Upstream nucleotide summary: a: 0, c: 3, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): t c g g c Downstream nucleotide summary: a: 0, c: 2, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 1, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 0, other: 0 >chr16:15171558-15171706 (-) ttgtttgtttgagatggtgtctc-gcttcttgcccaggctggag-tgcagtggtgcgatctcggctcactgcaacctccacctccggggttcaagcagttctcctgcctcagcctcctgattagctgggattacaggcacatgccaccatg >BF681075:1-150 (-) ttgttt-tttgagatggtgtctcagcttcttgcccaggctggagttgcagtggtgcgatctcggctcactgcaacctccgcctccggggttcaagcggttctcctgcctcagcctcctgattggctgggattgcaggcacgtgccaccatg End editing Edited EST: AA156551, type: ag Aligns to: chr16:75632998-75633423 (--) All mismatches: ag (43), ag (90), ag (92), ag (95), ag (99), ag (121), ag (122), ag (148), ag (159), ag (226), ag (239), Editing mismatches: 11, all mismatches: 11, alignment length: 427, cluster length: 196, total number of As: 55 Locations in RNA: 43 90 92 95 99 121 122 148 159 226 239 Locations in genome: 75633040 75633086 75633088 75633091 75633095 75633117 75633118 75633144 75633155 75633222 75633235 Upstream nucleotide (in genome): t g g c g a t t a c a Upstream nucleotide summary: a: 3, c: 2, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): c a g g g t a g t g g Downstream nucleotide summary: a: 2, c: 1, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 2, ca: 0, cc: 0, cg: 2, ct: 0, ga: 1, gc: 0, gg: 2, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr16:75632998-75633423 (-) cagccaagagaatcaaagatctagtaacactgtttagatgtctcaattatgtgagacagattcctgttgttattttgattaagcctgtttgtgttggttttctgacttacaattgaaagagttctgtccaaaaagccaaaaggtggccaggcttggtggctcaggcctgtaatcccagcactttgggaagcccaggcaggcagatcacttgaggtcaggagttcaagaccagcctggccaacctggtgaaaccctgtctctactaaaaatgcaaaaactagccgggcatggtggcgcacacctgtaatcctagctactcgggaggctgaggcaggagaattgcttgaacccaggaggcggaggtagtggtgagcaaaga-tcgtaccgctgcactccagcctgggtgatagagcaagaccctatctc >AA156551:1-427 (-) cagccaagagaatcaaagatctagtaacactgtttagatgtctcaattatgtgagacagattcctgttgttattttgattaagcctgtttgtgttggttttctgacttacaattgaaagagttctgtccaaaaagccaaaaggtggccaggcttggtggctcaggcctgtaatcccagcactttgggaggcccaggcaggcggatcacttgaggtcaggagttcaagaccagcctggccaacctggtgaaaccctgtctctactaaaagtgcaaaaactggccgggcatggtggcgcacacctgtggtcctagctactcgggaggctggggcggggggattgcttgaacccaggaggcggaggtagtggtgagcaaagaatcgtgccgctgcactccagcctgggtgatagagcaagaccctatctc End editing Edited EST: AA676304, type: ag Aligns to: chr16:2012081-2012272 (--) All mismatches: ag (11), ag (20), ag (25), cg (47), ag (89), ag (98), ag (101), ag (104), ag (147), ag (152), ag (171), ag (183), Editing mismatches: 11, all mismatches: 12, alignment length: 192, cluster length: 173, total number of As: 42 Locations in RNA: 11 20 25 89 98 101 104 147 152 171 183 Locations in genome: 2012091 2012100 2012105 2012169 2012178 2012181 2012184 2012227 2012232 2012251 2012263 Upstream nucleotide (in genome): t t c g g c t g t c c Upstream nucleotide summary: a: 0, c: 4, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): t g a c g g t c c t c Downstream nucleotide summary: a: 1, c: 4, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 1, cc: 1, cg: 1, ct: 1, ga: 0, gc: 2, gg: 1, gt: 0, ta: 0, tc: 1, tg: 1, tt: 2, other: 0 >chr16:2012081-2012272 (-) gccaaggccacctttgatgccatttctaagacctacagctacctgacccccgacctctggaaggagactgtattcaccaagtctccctatcaggagttcactgaccacctcgtcaagacccacaccagagtctccgtgcagcggactcaggctccag-ctgtggctacaacatagggtttttatacaagaaaa >AA676304:1-192 (-) gccaaggccgcctttgatgccgtttctaagacctacagctgcctggcccccgacctctggaaggagactgtattcaccaagtctccctgtcgggggttcactggccacctcgtcaagacccacaccagagtctccgtgcagcggagtcag-ctccaggctgtggctacgacatggggtttttgtacaagaaaa End editing Edited EST: T54917, type: ag Aligns to: chr17:63683298-63683564 (--) All mismatches: ag (112), ag (128), ag (136), ag (156), ag (161), Editing mismatches: 5, all mismatches: 5, alignment length: 267, cluster length: 50, total number of As: 13 Locations in RNA: 112 128 136 156 161 Locations in genome: 63683409 63683425 63683433 63683453 63683458 Upstream nucleotide (in genome): c t c a t Upstream nucleotide summary: a: 1, c: 2, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g t g a c Downstream nucleotide summary: a: 1, c: 1, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 1, other: 0 >chr17:63683298-63683564 (-) cacctgtaatcccaacacttagggaggccaaggtgggcggatcaacgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctcctaaaaatacaaaaattagctgggcgtggtggcaggtgcctatagtcctagctactcaggaggctgaggcaggagaattgcttgaactggggaggcggaggttgcagtgagccgagatcacgccactgcgctccagcctaggagacagagcaagactccatctcaaaaa >T54917:1-267 (-) cacctgtaatcccaanacttagggaggccaaggtgggcggatcaacgaggtcaggagttcgagaccagcctggccaacatggtgaaaccctgtctctcctaaaaatgcaaagattagctgggcgtggtggcgggtgcctgtagtcctagctactcgggaggctgaggcaggagaattgcttgaactggggaggcggaggttgcagtgagccgagatcacgccactgcgctccagcctaggagacagagcaagactccatctcaaaaa End editing Edited EST: DW432631, type: ag Aligns to: chr17:63029837-63029993 (--) All mismatches: ag (160), ag (161), ag (200), ag (218), ag (231), ag (237), ag (240), ag (246), ag (259), Editing mismatches: 9, all mismatches: 9, alignment length: 157, cluster length: 100, total number of As: 22 Locations in RNA: 160 161 200 218 231 237 240 246 259 Locations in genome: 63029888 63029889 63029928 63029946 63029959 63029965 63029968 63029974 63029987 Upstream nucleotide (in genome): a a c t c t t t c Upstream nucleotide summary: a: 2, c: 3, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g a a t g g g t g Downstream nucleotide summary: a: 2, c: 0, g: 5, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 1, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 2, tt: 2, other: 0 >chr17:63029837-63029993 (-) acacccagctaatttttgtatttttagtagagacagggtttcaccatattggccaggctggtctcaaactcctgaccttgtgatccgcccacctcggcctcccaaagtgttgggatcacaggtgtgagccaccaagcccggcctcttttgaaaattt >DW432631:109-265 (-) acacccggctaatttttgtgtttttggtggagacggggtttcaccatgttggccaggctggtctcgaactcctgaccttgtgatccgcccacctcggcctcccagggtgttgggatcacaggtgtgagccaccaagcccggcctcttttgaaaattt End editing Edited EST: BM686320, type: ag Aligns to: chr17:17735983-17736254 (--) All mismatches: ag (8), ag (9), ag (31), ag (63), ag (85), ag (141), ag (153), Editing mismatches: 7, all mismatches: 7, alignment length: 269, cluster length: 146, total number of As: 26 Locations in RNA: 8 9 31 63 85 141 153 Locations in genome: 17735990 17735991 17736013 17736045 17736067 17736123 17736135 Upstream nucleotide (in genome): a a g t t t c Upstream nucleotide summary: a: 2, c: 1, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): g a t g g g g Downstream nucleotide summary: a: 1, c: 0, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 0, tg: 3, tt: 0, other: 0 >chr17:17735983-17736254 (-) ttttttgtttgtttgtttttgagacagagtcttgctctgtcacccaggctggagtgcagtggcgcgatctcggctcactgcaaactccgcctcccgggttcacaccattctcctgcctcagcctcccgagtagcttgggactataggtgcgtgccaccatgcctggctaattttttgtatttttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcatgatctgcccgcctcggcctcccaaagtgctgg >BM686320:1-269 (-) tttttt-ttt-ttt-tttttgagacagagtcttgctctgtcacccaggctggagtgcagtggcgcgatctcggctcactgcaaactccgcctcccgggttcacaccattctcctgcctcggcctcccgagtggcttgggactataggtgcgtgccaccatgcctggctaattttttgtatttttagtggagacggggtttcaccgtgttggccaggatggtctcgatctcctgacctcatggtctgcccgcctcggcctcccagggtgctgg End editing Edited EST: AW192940, type: ag Aligns to: chr17:15424342-15424870 (--) All mismatches: tc (14), ag (284), ag (287), ag (292), ag (309), ag (318), ag (329), ag (345), ag (414), ag (420), ag (425), ag (430), Editing mismatches: 11, all mismatches: 12, alignment length: 529, cluster length: 147, total number of As: 28 Locations in RNA: 284 287 292 309 318 329 345 414 420 425 430 Locations in genome: 15424625 15424628 15424633 15424650 15424659 15424670 15424686 15424755 15424761 15424766 15424771 Upstream nucleotide (in genome): c t c t t c c a c c a Upstream nucleotide summary: a: 2, c: 6, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): g g t g t a c g c g t Downstream nucleotide summary: a: 1, c: 2, g: 5, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 1, cc: 2, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 2, tt: 1, other: 0 >chr17:15424342-15424870 (-) ccaatacccactaacttaattagtagagattataataattttgttttttttttgagacggagtctcgctctgttgcccaggctggagtgcagtggcgtaatctcagctcactgcaagctccgcctcctgggctcacgacattctcctgcctcagcctcccaggtagctggaactgcaggcgcccaccaccacgcctggccaatttttttgtatatttagtagagatggggttttgccatgttagcaggatggtcttgatctcctgaccttgtgatctgcctgcctcaacctcccaaactgctgggattacaggtgtgagccaccgcacctggccagattataataattttataatcaacttgttaagtaccaaaaaagctctgccagaattttgatcataactccattgaaaccgtgtatcaagtggggggaattctcatctttgtaatattgaatcttctgatccatgaacattgtatgtctcttaagtccttgatttctttaagtaaagtttttataattttctcta >AW192940:1-529 (-) ccaatacccactaacttaattagtagagattataataattttgttttttttntgagacggagtctcgctctgttgcccaggctggagtgcagtggcgtagtctcggctcgctgcaggctccgcctcctgggctcacgacattctcctgcctcagcctcccaggtagctggaactgcaggcgcccgccaccacgcctggccgatttttttgtgtatttagtggagatggggttttgccgtgttggcgggatggtcttgatctcctgaccttgtgatctgcctgcctcaacctcccaaactgctgggattacaggtgtgagccaccgcacctggccagattataataattttataatcaacttgttaagtaccaaaaaagctctgccagaattttgatcataactccattgaaaccgtgtatcaagtggggggaattctcatctttgtaatattgaatcttctgatccatgaacattgtatgtctcttaagtccttgatttctttaagtaaagttttcataattttctcta End editing Edited EST: AA188940, type: ag Aligns to: chr17:61506433-61506906 (--) All mismatches: ag (68), ag (101), ag (129), ag (136), ag (141), ag (142), Editing mismatches: 6, all mismatches: 6, alignment length: 474, cluster length: 77, total number of As: 20 Locations in RNA: 68 101 129 136 141 142 Locations in genome: 61506498 61506533 61506561 61506568 61506573 61506574 Upstream nucleotide (in genome): c g t c a t Upstream nucleotide summary: a: 1, c: 2, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): c a g g t a Downstream nucleotide summary: a: 2, c: 1, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 1, cg: 1, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr17:61506433-61506906 (-) aagttagcagggcgtggtggcatgcactgtggtcccaggtacttgggaggctgaggtgggtgggtcacttgagctcaggaggttgaggctgcagtgagctatgatcacaccactgcactccagcctgggtgacagagtgagactccatctaaaaacaaaacaaaacatctaggtcgggcacagtggcttatgcctgtaattccagcactttgggaggctgaggtaggtggatcacttgaggtcaggagtttgagaccagccttggcaacatggcgaaaccctgtctctactaaaaatacaaaaattagctgggcatggtggcgggtgcctgtaattccagctactagggaggctgaggcaggaaaattgtttgaacctgggaggaggaggttgcagtgagccgggctcacgccattgcactctagcctgggtgacaga--ctctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaa >AA188940:1-474 (-) aagttagcagggcgtggtggcatgcactgtggtcccaggtacttgggaggctgaggtgggtgggtcacttgagctcaggaggttgaggctgcagtgagctatgatcacaccactgcactccagcctgggtgacagagtgagactccatctaaaaacaaaacaaaacatctaggtcgggcacagtggcttatgcctgtaattccagcactttgggaggctgaggtaggtggatcacttgaggtcaggagtttgagaccagccttggcaacatggcgaaaccctgtctctactaaaaatacaaaaattagctgggcatggtggcgggtgcctgtggttccggctactggggaggctgaggcaggaaaattgtttggacctgggaggaggaggttgcagtgagccgg--tcgcgccattgcactctagcctgggtgacagagactctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: AA861980, type: ag Aligns to: chr17:48363495-48363780 (--) All mismatches: ag (100), ag (104), ag (106), ag (110), ag (175), ag (176), ag (198), Editing mismatches: 7, all mismatches: 7, alignment length: 286, cluster length: 99, total number of As: 23 Locations in RNA: 100 104 106 110 175 176 198 Locations in genome: 48363594 48363598 48363600 48363604 48363669 48363670 48363692 Upstream nucleotide (in genome): c t t g a t t Upstream nucleotide summary: a: 1, c: 1, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): c a t g t a g Downstream nucleotide summary: a: 2, c: 1, g: 2, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 2, tc: 0, tg: 1, tt: 1, other: 0 >chr17:48363495-48363780 (-) ttagggtgaagtccaaatccaacgaagagtgttcttatcagagacagaaaagggggacacgcatagacacagaagaaaatgataggctaggcatgatggcttgcacctgtaatcccagtgcttcgggaggctgaggcaggaggattgctcaagcccaggagttccaggctgcagtgagctataatcaccccactgtactccagcctgggtgacagagcgagaccctgtctctgaaaaaagaaagaaggaaggaaggaaagaaaaagaaacaaagagaaagaaagac >AA861980:1-286 (-) ttagggtgaagtccaaatccaacgaagagtgttcttatcagagacagaaaagggggacacgcatagacacagaagaaaatgataggctgggcatgatggcttgcacctgtggtcccagtgcttcgggaggctgaggcaggaggattgctcaagcccaggagttccaggctgcagtgggctgtgatcgccccactgtactccagcctgggtgacagagcgagaccctgtctctgaaaaaagaaagaaggaaggaaggaaagaaaaagaaacaaagagaaagaaagac End editing Edited EST: AA890053, type: ag Aligns to: chr17:15433894-15434291 (--) All mismatches: ag (269), ag (282), ag (291), ag (331), ag (333), ag (346), ag (349), ag (363), ag (380), ag (390), ag (394), Editing mismatches: 11, all mismatches: 11, alignment length: 398, cluster length: 126, total number of As: 39 Locations in RNA: 269 282 291 331 333 346 349 363 380 390 394 Locations in genome: 15434159 15434172 15434181 15434221 15434223 15434236 15434239 15434253 15434270 15434280 15434284 Upstream nucleotide (in genome): c g c c a a t c c a c Upstream nucleotide summary: a: 3, c: 6, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): c g g g c a c a g t g Downstream nucleotide summary: a: 2, c: 3, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 1, ca: 1, cc: 1, cg: 4, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr17:15433894-15434291 (-) tgagcccaggaatttgagaccagcctgggcaacatggcaaaaagccatctctacaaaaaatacaacaaacagctgggtgtggtggc-atgtgcctgtggtcccagctactcaggaggctgaggcaggaggatcacttgagtctggcaggttgaggccttgattgtgtcactgcactcctacttgggtgacacagtgagacaccctcaaaaaaaaaaaaaagtggaaattaaaacatacccagataaaaactaagagaattcactgctagcagacctgccttaaaagaaatgctaaaagacatccttcagactgaaatgaaaggacactagacaataactccaatccacatgaggaaataaaaaacatcattaaaggtaactacataggtaaatatgaaa >AA890053:4-401 (-) tgagcccgggagtttgagaccggcctgggcaacatggcgaaaagccatctctgcagaaaatacaacaagcggctgggtgtggt-gcnatgtgcctgtggtcccagctactcgggaggctggggcaggaggatcgcttgagtctggcaggttgaggccttgattgtgtcactgcactcctacttgggtgacacagtgagacaccctcaaaaaaaaaaaaaagtggaaattaaaacatacccagataaaaactaagagaattcactgctagcagacctgccttaaaagaaatgctaaaagacatccttcagactgaaatgaaaggacactagacaataactccaatccacatgaggaaataaaaaacatcattaaaggtaactacataggtaaatatgaaa End editing Edited EST: AL039117, type: ag Aligns to: chr18:12850744-12851196 (--) All mismatches: ag (70), ag (87), ag (107), ag (113), ag (126), ag (156), ag (166), tc (167), ag (175), ag (181), ag (215), Editing mismatches: 10, all mismatches: 11, alignment length: 453, cluster length: 146, total number of As: 43 Locations in RNA: 70 87 107 113 126 156 166 175 181 215 Locations in genome: 12850807 12850824 12850844 12850850 12850863 12850893 12850903 12850912 12850918 12850952 Upstream nucleotide (in genome): c c a c c t t t t c Upstream nucleotide summary: a: 1, c: 5, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a g t g g g g c a g Downstream nucleotide summary: a: 2, c: 1, g: 6, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 1, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr18:12850744-12851196 (-) tatataatattattaaccttaatataagaagaaaaatacatagaaccctatatccagcaattagaaaatgcacatttttctaggactgacatggtctatttgtaaaaaatggaccattgactaggctgtcaagtaaatcttaaaatttaagaatgcctggctgggcgctgtggctcacgcctgtaatcccagcactttgggaggcctaggtgggtggatcacctgaggtcgggagtttgagaccagcctgaccaacatggagaaacctcgtctctactaaaaatacaaagattagccaggcatagtggtgcatgcctgtaatctcagctactcaggaggctgaggcaggagaattgcttgaatccgggaggcagaggttgcggtgagccaagattgtgccactgcactccagcctgggcaacgagagcgaaactctgtctcaaaaaaaaaaaa >AL039117:7-459 (-) tatataatattattaaccttaatataagaagaaaaatacatagaaccctatatccagcaattagaaaatgcacatttttctaggactgncatggtctatttgtaaaaaatggaccattgactaggctgtcaagtaaatcttaaaatttaagaatgcctggctgggcgctgtggctcacgcctgtaatcccagcactttgggaggcctaggtgggtggatcacctgaggtcgggagtttgagaccggcctgaccaacatggagaaacctcgtctctactgaaaatgcaaagatcggccaggcatggtggtgcatgcctgtaatctcagctactcgggaggctgaggcgggagagttgcttgaatccgggaggcggaggttgcggtgagccgagattgtgccactgcactccagcctgggcaacgagagcgaaactctgtctcaaaaaaaaaaaa End editing Edited EST: CA842324, type: ag Aligns to: chr19:39502845-39503163 (--) All mismatches: ag (43), ag (48), ag (49), ag (53), ag (54), ag (109), ag (119), ag (173), ag (181), ag (183), ag (246), ac (305), Editing mismatches: 11, all mismatches: 12, alignment length: 319, cluster length: 204, total number of As: 52 Locations in RNA: 43 48 49 53 54 109 119 173 181 183 246 Locations in genome: 39502887 39502892 39502893 39502897 39502898 39502953 39502963 39503017 39503025 39503027 39503090 Upstream nucleotide (in genome): c a a a t t t a c a a Upstream nucleotide summary: a: 6, c: 2, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): c g a g a c a c t c c Downstream nucleotide summary: a: 3, c: 5, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 2, at: 0, ca: 0, cc: 1, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr19:39502845-39503163 (-) cccttctggatgaaacatttagatgagaatttgaaaatgacgctgggcgtggtggctcacgcctgtaatcccaacactttgggaggccgaggtgggtggatctcctgaggtcgggagtttgagaccagcctggtcaacatggagaaaccccatctctattaaaaatacaaaatgggtcgggcgtggttgcccatgcctgtaatcgcagctactcggaaggctgaggcaggagaattgcttgaacccgggaggctgaggttgcggtaagcaaagatcacgccattgcactccagcctgggcaacaagagcgaaactgtct >CA842324:1-319 (-) cccttctggatgaaccatttagatgagaatttgaaaatgacgctgggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatctcctgaggtcgggagtttgagaccagcctggtcagcgtggagaagccccatctctattaaaaatacaaaatgggtcgggcgtggttgcccatgcctgtgatcgcagctgctcggaaggctgaggcaggagaattgcttgaacccgggaggctgaggttgcggtgggcagggatcgcgccattgcactccagcctgggcaacaagagcgaaactgtct End editing Edited EST: CA842876, type: ag Aligns to: chr19:39502845-39503146 (--) All mismatches: ag (43), ag (48), ag (49), ag (53), ag (54), ag (109), ag (119), ag (173), ag (181), ag (183), ag (246), Editing mismatches: 11, all mismatches: 11, alignment length: 302, cluster length: 204, total number of As: 52 Locations in RNA: 43 48 49 53 54 109 119 173 181 183 246 Locations in genome: 39502887 39502892 39502893 39502897 39502898 39502953 39502963 39503017 39503025 39503027 39503090 Upstream nucleotide (in genome): c a a a t t t a c a a Upstream nucleotide summary: a: 6, c: 2, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): c g a g a c a c t c c Downstream nucleotide summary: a: 3, c: 5, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 1, ac: 3, ag: 2, at: 0, ca: 0, cc: 1, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr19:39502845-39503146 (-) tttagatgagaatttgaaaatgacgctgggcgtggtggctcacgcctgtaatcccaacactttgggaggccgaggtgggtggatctcctgaggtcgggagtttgagaccagcctggtcaacatggagaaaccccatctctattaaaaatacaaaatgggtcgggcgtggttgcccatgcctgtaatcgcagctactcggaaggctgaggcaggagaattgcttgaacccgggaggctgaggttgcggtaagcaaagatcacgccattgcactccagcctgggcaacaagagcgaaactgtct >CA842876:1-302 (-) tttagatgagaatttgaaaatgacgctgggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggtggatctcctgaggtcgggagtttgagaccagcctggtcagcgtggagaagccccatctctattaaaaatacaaaatgggtcgggcgtggttgcccatgcctgtgatcgcagctgctcggaaggctgaggcaggagaattgcttgaacccgggaggctgaggttgcggtgggcagggatcgcgccattgcactccagcctgggcaacaagagcgaaactgtct End editing Edited EST: AW517483, type: ag Aligns to: chr19:16750778-16750996 (--) All mismatches: ag (72), ag (80), ag (112), ag (121), ag (122), Editing mismatches: 5, all mismatches: 5, alignment length: 219, cluster length: 51, total number of As: 17 Locations in RNA: 72 80 112 121 122 Locations in genome: 16750849 16750857 16750889 16750898 16750899 Upstream nucleotide (in genome): a a t a t Upstream nucleotide summary: a: 3, c: 0, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g c c t a Downstream nucleotide summary: a: 1, c: 2, g: 1, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr19:16750778-16750996 (-) aatcgcttgaacctgggaggcagaggttgcagtgagcagagatcgtgctgctgctaaaaaacacaaaaattagctgggcgtggtgacgggtgcctgtaatcccagatactcaggaggctgaggcaggagaatcgcttgaacccggaaagtggaggttgcattgagctgagattgagccattgcactccagcctgggcaacaagagcaaaactccatctc >AW517483:1-219 (-) aatcgcttgaacctgggaggcagaggttgcagtgagcagagatcgtgctgctgctaaaaaacacaaaaattagctgggcgtggtgacgggtgcctgtggtcccagatgctcaggaggctgaggcaggagaatcgcttgagcccggaaggtggaggttgcattgagctgagattgagccattgcactccagcctgggcaacaagagcaaaactccatctc End editing Edited EST: BF680074, type: ag Aligns to: chr1:21409257-21409560 (--) All mismatches: ag (25), ag (31), ag (81), ag (86), ag (105), ag (108), ag (153), Editing mismatches: 7, all mismatches: 7, alignment length: 304, cluster length: 129, total number of As: 25 Locations in RNA: 25 31 81 86 105 108 153 Locations in genome: 21409281 21409287 21409337 21409342 21409361 21409364 21409409 Upstream nucleotide (in genome): t a a t a t t Upstream nucleotide summary: a: 3, c: 0, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): g g g g a g c Downstream nucleotide summary: a: 1, c: 1, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 0 >chr1:21409257-21409560 (-) ttttttttttttttttttttttttttttttgagacagagtctcgctgtgtctcccaggttggagtgcagtggcgagatctcggctcactgcaagctccccctcccaggttcatgccattctcctgcctcagcctcccaagtagctgggactacaggcgcccgccaacacgcccggctaattttttgtatttttagtagaaacggggtttcaccgtgttagccaagatggtctcgatctcctgacctcgtgatccgcccgtctcggcctcccaaagtgctaggattacaggcgtgagccaccgcg >BF680074:1-304 (-) ttttttttttttttttttttttttttttttgagacagagtctcgctgtgtctcccaggttggagtgcagtggcgagatctcggctcactgcaagctccccctcccaggttcatgccattctcctgcctcagcctcccaagtagctgggactgcaggcgcccgccaacacgcccggctaattttttgtatttttagtggagacggggtttcaccgtgttggccaggatggtctcgatctcctgacctcgtgatccgcccgtctcggcctcccaaggtgctgggattacaggcgtgagccaccgcg End editing Edited EST: AI049875, type: ag Aligns to: chr1:151420143-151420450 (--) All mismatches: ag (19), ag (20), ag (27), ag (29), ag (79), ag (99), ag (105), Editing mismatches: 7, all mismatches: 7, alignment length: 308, cluster length: 87, total number of As: 23 Locations in RNA: 19 20 27 29 79 99 105 Locations in genome: 151420161 151420162 151420169 151420171 151420221 151420241 151420247 Upstream nucleotide (in genome): a t a g a t c Upstream nucleotide summary: a: 3, c: 1, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g a c a t t t Downstream nucleotide summary: a: 2, c: 1, g: 1, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 1, ca: 0, cc: 0, cg: 0, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 1, other: 0 >chr1:151420143-151420450 (-) tctaggtctggggcaggaaatatatgagataagctgaaacatcttgactatcagcaaagattttatcaaacgatgctagggttgtgtcagaaggactcagcagccaactgaagacgttcccactggccaaaatagggcacattgagtatctgtaaagataactgcatggatcaaaacacatcaaaagctgggcacagtggctcatacctataatcccagcactttgggaatctgaggcaggtgtgttgcttgagtccaggagtttgagaccagcctgggaaacatggtaagaccccctctctaccaaa >AI049875:1-308 (-) tctaggtctggggcaggaaatatatgagataagctgaaacatcttgactatcagcaaagattttatcaaacgatgctagggttgtgtcagaaggactcagcagccaactgaagacgttcccactggccaaaatagggcacattgagtatctgtaaagataactgcatggatcaaaacacatcaaaagctgggcacagtggctcgtacctgtaatcccagcactttgggagtctgaggcaggtgtgttgcttgagtccaggagtttgagaccagcctggggagcatggtgggaccccctctctaccaaa End editing Edited EST: BM664052, type: ag Aligns to: chr21:33944738-33945115 (--) All mismatches: ag (38), ag (43), ag (51), ag (66), ag (71), ag (79), ag (87), ag (88), ag (110), ag (118), Editing mismatches: 10, all mismatches: 10, alignment length: 378, cluster length: 81, total number of As: 24 Locations in RNA: 38 43 51 66 71 79 87 88 110 118 Locations in genome: 33944770 33944775 33944783 33944798 33944803 33944811 33944819 33944820 33944842 33944850 Upstream nucleotide (in genome): t a a g a c a c t c Upstream nucleotide summary: a: 4, c: 3, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g a c g g g g a a c Downstream nucleotide summary: a: 3, c: 2, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 2, at: 0, ca: 1, cc: 1, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr21:33944738-33945115 (-) gggcaagacaggggagctttgtctgtatttacagccacaccccatcgctccgttaggcctgagctccgcctccttcagaccagtggcagcatttgattctcataggagtgcgaaccctactgtgaactgcgcatgcgagggatctaggctgtgcgctcctcatgagaatctaatgcctgatgatctctcactgtctctcttcacccctagatcagaccctctagttgcaggaaaaaaagctcagggcggtcgagtgcagtggctcacgcctgtaatcccagcactttgggaggccaaggtgggcagatcacaaggtgaggagttcgagaccaacctggtaaacatagggaaaccctatctcttctaaaaaaaaaaaaa >BM664052:6-383 (-) gggcaagacaggggagctttgtctgtatttacagccacaccccatcgctccgttaggcctgagctccgcctccttcagaccagtggcagcatttgattctcataggagtgcgaaccctactgtgaactgcgcatgcgagggatctaggctgtgcgctcctcatgagaatctaatgcctgatgatctctcactgtctctcttcacccctagatcagaccctctagttgcaggaaaaaaagctcagggcggtcgagtgcagtggctcgcgcctgtgatcccagcactttgggaggccggggtgggcggatcacagggtggggagttcgagaccagcctggtagacatggggaaaccctatctcttctaaaaaaaaaaaaa End editing Edited EST: BF673527, type: ag Aligns to: chr3:136423395-136423684 (--) All mismatches: ag (129), ag (153), ag (155), ag (165), ag (194), ag (201), ag (219), ag (264), Editing mismatches: 8, all mismatches: 8, alignment length: 290, cluster length: 136, total number of As: 30 Locations in RNA: 129 153 155 165 194 201 219 264 Locations in genome: 136423523 136423547 136423549 136423559 136423588 136423595 136423613 136423658 Upstream nucleotide (in genome): t c t t a c c c Upstream nucleotide summary: a: 1, c: 4, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): a g c g g g g g Downstream nucleotide summary: a: 1, c: 1, g: 6, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 1, tt: 0, other: 0 >chr3:136423395-136423684 (-) tttttttttttttttttttttgagacagggactcactcttcacccaggctggagtgcagtgacatgatctcagctcactgcaaccccccaggctcaagcgattctctcacctcagctttctgagtagttgggactacagatgcatgccaccacgcctggctaattttctgtatttttggtagagacggagttttgttatgtttcccaggttggtctggaacccctgagctcaagtgatctgcctgcctgggcctcccaaagtgctgggattacaggcatgagccactact >BF673527:1-290 (-) tttttttttttttttttttttgagacggggactcactcttcacccaggctggagtgcagtgacatgatctcggctcactgcaaccccccgggctcaggcgattctctcacctcagctttctgagtggttgggactgcggatgcatgccaccacgcctggctgattttctgtatttttggtagagacggagttttgttatgtttcccaggttggtctggaacccctgagctcaagtgatctgcctgcctgggcctcccaaagtgctgggattacaggcatgagccactact End editing Edited EST: AA365583, type: ag Aligns to: chr3:119678379-119678676 (--) All mismatches: ag (46), ag (80), ag (81), ag (95), ag (108), ag (112), ag (116), ag (122), ag (155), ag (164), ag (165), Editing mismatches: 11, all mismatches: 11, alignment length: 299, cluster length: 120, total number of As: 40 Locations in RNA: 46 80 81 95 108 112 116 122 155 164 165 Locations in genome: 119678424 119678458 119678459 119678473 119678486 119678490 119678494 119678500 119678533 119678542 119678543 Upstream nucleotide (in genome): c a g c c t c t a a t Upstream nucleotide summary: a: 3, c: 4, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): t c a g g c g a a a a Downstream nucleotide summary: a: 5, c: 2, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 0, ca: 0, cc: 0, cg: 3, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 2, tc: 1, tg: 0, tt: 0, other: 0 >chr3:119678379-119678676 (-) tgtaatcctagcactttgggaac-aataattgttattgctaataatagcacttagggaggctgaggttggaggatcatttgaggtcacgagttcaagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaaaattagctgggcatggtggtacacgcgtgtaatcccagctactcaggaggctgaggcaggagaatcacttgaacctgggagacagaggttgcagtgagctgagatcatgccactgcactccagcctgggcgacagagtgaggctctgtcttt >AA365583:1-299 (-) tgtaatcctagcactttgggaacaaataattgttattgctaataatagcacttagggaggctgaggttggaggatcatttgaggtcacgagttcaagaccagcctggccaacatggtgaaaccccatctctactggaaatacaagaaaattagctgggcatggtggtacacncgtgtgatcccggctgctcgggaggctgaggcgggagaatcacttgggcctgggagacagaggttgcagtgagctgagatcgtgccactgcactccagcctgggcgacagagtgaggctctgtcttt End editing Edited EST: AL565917, type: ga Aligns to: chr3:50379444-50379573 (--) All mismatches: ga (584), ga (585), ga (589), ga (590), ga (601), ga (622), Editing mismatches: 6, all mismatches: 6, alignment length: 129, cluster length: 40, total number of Gs: 12 Locations in RNA: 584 585 589 590 601 622 Locations in genome: 50379445 50379446 50379451 50379452 50379463 50379484 Upstream nucleotide (in genome): g a g t g t Upstream nucleotide summary: a: 1, c: 0, g: 3, t: 2, other: 0 Downstream nucleotide (in genome): t g a g a a Downstream nucleotide summary: a: 3, c: 0, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 2, gc: 0, gg: 0, gt: 1, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr3:50379444-50379573 (-) agcttcgggccttcctcacagacacactgctggaccagctgcccaacctggcccacttgcagagtttcctggcccatctgaccctaactgaaacccagcctcctaagaaggacctggtgttggaacaggt >AL565917:583-711 (-) agcttcgggccttcctcacagacacactgctggaccagctgcccaacctggcccacttgcagagtttcctggcccatctgaccctaactaaaacccagcctcctaagaagaacctggtgttaaa-caaat End editing Edited EST: DW434685, type: ag Aligns to: chr5:38845125-38845374 (--) All mismatches: ag (9), ag (47), ag (48), ag (78), ag (102), ag (166), ag (168), ag (178), ag (181), ag (227), Editing mismatches: 10, all mismatches: 10, alignment length: 250, cluster length: 219, total number of As: 38 Locations in RNA: 9 47 48 78 102 166 168 178 181 227 Locations in genome: 38845125 38845163 38845164 38845194 38845218 38845282 38845284 38845294 38845297 38845343 Upstream nucleotide (in genome): c a a g t c t t t a Upstream nucleotide summary: a: 3, c: 2, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): n g a c g g c g g g Downstream nucleotide summary: a: 1, c: 2, g: 6, t: 0, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 1, tg: 3, tt: 0, other: 1 >chr5:38845125-38845374 (-) gagtgcagtggcgcgatctcggctcactgtaagctccgcctcccgggttcacaccattctcctgcctcagcctccctagtagctgggactacagacgaccgccaccacgcctggctaatttttctatgtttagtagagacggggtttcaccgtgttagccaggatggtctcgatctcctgacctcgtgatccgcccgcctcagcctcccaaagtgctgggattacaggcgtcagccactgcgcccggcca >DW434685:9-258 (-) gagtgcagtggcgcgatctcggctcactgtaggctccgcctcccgggttcacaccattctcctgcctcagcctccctggtggctgggactgcggacgaccgccaccacgcctggctaatttttctatgtttagtagagacggggtttcaccgtgttggccaggatggtctcgatctcctggcctcgtgatccgcccgcctcagcctcccagggtgctgggattacaggcgtcagccactgcgcccggccg End editing Edited EST: DW436234, type: ag Aligns to: chr5:95283852-95284102 (--) All mismatches: tg (9), ag (81), ag (97), ag (119), ag (137), ag (148), ag (161), ag (163), ag (173), ag (185), ag (198), ag (222), Editing mismatches: 11, all mismatches: 12, alignment length: 252, cluster length: 142, total number of As: 25 Locations in RNA: 81 97 119 137 148 161 163 173 185 198 222 Locations in genome: 95283930 95283946 95283968 95283986 95283997 95284010 95284012 95284022 95284034 95284047 95284071 Upstream nucleotide (in genome): t t t a c c t t c c a Upstream nucleotide summary: a: 2, c: 4, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): t g g t c g c g g t g Downstream nucleotide summary: a: 0, c: 2, g: 6, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 0, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 3, tt: 1, other: 0 >chr5:95283852-95284102 (-) gagtgctgtggcgccatctcggctcactgcaagctccgcctcccgggttcacgccattctcctgcctcagcctcccgagtagctgcgattacaggtgcccacaccacacccggctaatttttcgtttttttagtagagacggggtttcaccatgttagccaggatggtctctatctcctgacctcttgatccgcccagcctcccaaagtgctgggattacaggcgtgagcaaccacgcccggcctta-tggc >DW436234:2-253 (-) gagtgctgtggcgccatctcggctcactgcaggctccgcctcccgggttcacgccgttctcctgcctcggcctcccgagtggctgcgattgcgggtgcccacaccgcacccggctagtttttcgtttttttagtggagacggggtttcaccatgttggccaggatggtctctgtctcctgacctcttgatccgcccagcctcccaaagtgctgggattacaggcgtgagcaaccacgcccggccgtaatggc End editing Edited EST: BI850201, type: ag Aligns to: chr5:53306568-53306829 (--) All mismatches: ag (16), ag (30), ag (31), ag (32), ag (40), ag (114), Editing mismatches: 6, all mismatches: 6, alignment length: 262, cluster length: 99, total number of As: 18 Locations in RNA: 16 30 31 32 40 114 Locations in genome: 53306583 53306597 53306598 53306599 53306607 53306681 Upstream nucleotide (in genome): c a a c c t Upstream nucleotide summary: a: 2, c: 3, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): a g a a g a Downstream nucleotide summary: a: 4, c: 0, g: 2, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 2, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr5:53306568-53306829 (-) gagacggagccttgctctgtcgcccgggctggagtgcagtggcgcgatctcagctcactgcaagctccgcctcccgggttcacgccattctccggcctcatcctctccgagtagctgggactacaggcgcccaccaccaagccccgctaattttttgtattttcagtagagacggggtttcaccgtgttctccatctcctgacctcgtgatccgcgcgcctcagcctcccaaagtgctgggattacaagcgtgagccaccgc >BI850201:1-262 (-) gagacggagccttgctctgtcgcccgggctggagtgcagtggcgcgatctcagctcactgcaagctccgcctcccgggttcacgccattctccggcctcatcctctccgagtagctgggactacaggcgcccaccaccaagccccgctgattttttgtattttcagtagagacggggtttcaccgtgttctccatctcctgacctcgtgatccgcgcgcctcggcctcccggggtgctgggattacgagcgtgagccaccgc End editing Edited EST: AW859879, type: ag Aligns to: chr5:133497798-133498044 (--) All mismatches: ag (112), ag (182), ag (183), ag (184), ag (187), ag (206), ag (216), Editing mismatches: 7, all mismatches: 7, alignment length: 247, cluster length: 105, total number of As: 33 Locations in RNA: 112 182 183 184 187 206 216 Locations in genome: 133497890 133497960 133497961 133497962 133497965 133497984 133497994 Upstream nucleotide (in genome): t a a a t t g Upstream nucleotide summary: a: 3, c: 0, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): a a a a c t t Downstream nucleotide summary: a: 4, c: 1, g: 0, t: 2, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 1, tg: 0, tt: 1, other: 0 >chr5:133497798-133498044 (-) ttgggagggcaaggtgggtgaattgcttgagttcaggagtttgcaacatgatgaaaccttatctctacaaaaacaaaatacaaaaatgagccaggtgtggtggcatgcacctgtagttgcagctacttgggaggctgaggtgggaggatcgcttaagcacaggaggtcgagtgagccatgatcgcggcactgcattccagcctgggtgacacagtgagatcttgtctcaaaaacaaacaaacaaccc >AW859879:20-266 (-) ttgggagggcaaggtgggtgaattgcttgagttcaggagtttgcaacatggtgaaaccttgtctctacaaaaacaaaatgcagggatgagccaggtgtggtggcatgcacctgtagttgcagctacttgggaggctgaggtgggaggatcgcttgagcacaggaggtcgagtgagccatgatcgcggcactgcattccagcctgggtgacacagtgagatcttgtctcaaaaacaaacaaacaaccc End editing Edited EST: DW426788, type: ag Aligns to: chr7:156680823-156681093 (--) All mismatches: ag (102), ag (125), ag (128), ag (134), ag (148), ag (170), ag (180), ag (229), ag (245), Editing mismatches: 9, all mismatches: 9, alignment length: 272, cluster length: 143, total number of As: 26 Locations in RNA: 102 125 128 134 148 170 180 229 245 Locations in genome: 156680915 156680937 156680940 156680946 156680960 156680982 156680992 156681041 156681057 Upstream nucleotide (in genome): t t t t c t t a a Upstream nucleotide summary: a: 2, c: 1, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): g g g t g c g g t Downstream nucleotide summary: a: 0, c: 1, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 4, tt: 1, other: 0 >chr7:156680823-156681093 (-) ctcgctgtgtttcccaggctggagtgcagtgactcaatctcggctcactgcaagctccgcccccccggttcatgccattctcctgcctcagcctcccgagtagctgggactacaggcacccgccaccacgcccagctaactttttgtatttttagtagagacgggg-tttcaccatgttagccaggaaggtcttgatctcctgacctcgtgattcgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccacgcccggcc >DW426788:10-281 (-) ctcgctgtgtttcccaggctggagtgcagtgactcagtctcggctcactgcaggctccgcccccccggttcatgccattctcctgcctcagcctcccgagtggctgggactgcaggcacccgccaccacgcccggctaactttttgtgtttttggtggagacggggttttcaccatgttggccaggaaggtcttgatctcctgacctcgtgattcgcccgcctcagcctcccaaagtgctgggattacaggcgtgagccaccacgcccggcc End editing Edited EST: CA428407, type: ag Aligns to: chr7:102166398-102166910 (--) All mismatches: ag (138), ag (139), ag (169), ag (175), ag (179), ag (238), ag (252), ag (270), ag (281), ag (311), ag (318), ga (494), Editing mismatches: 11, all mismatches: 12, alignment length: 514, cluster length: 181, total number of As: 51 Locations in RNA: 138 139 169 175 179 238 252 270 281 311 318 Locations in genome: 102166516 102166517 102166547 102166553 102166557 102166616 102166630 102166648 102166659 102166689 102166696 Upstream nucleotide (in genome): a a t c c t c a c a c Upstream nucleotide summary: a: 4, c: 5, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g a g c t g g g g t c Downstream nucleotide summary: a: 1, c: 2, g: 6, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 1, ca: 0, cc: 2, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr7:102166398-102166910 (-) aaaaagcaggtgggagtaatccatggcaataaattggggtagaagttattcctggaggtggtgatgactggtatgggacacaaggaagccacctggggctgggaatgttctagttcttgatctgggagatggtcatgcagtcgtaggcctgtgtaagacttcctcgagctgtccacataagatttgtgcactttagctgaatgtggtggcttacacctggaatcctagcactttgagaggctgaggtgggcagattgctagaagccaggagttcgagaccagcctgagcaacatagtgagccccctgactctaaaaaaaaaatttttttttttaattatctgagcatgctggcatgcacctgtagtcccagctacttaggaggccgaggtggaaagattgcttgggcccaggagattgaggctgcagtgagctatgatcacaccacttcactccagcctgggcaacggagcgagaccctatctcaaaaaaa-taaataaaatatttgtgcagtt >CA428407:19-532 (-) aaaaagcaggtgggagtaatccatggcaataaattgggatagaagttattcctggaggtggtgatgactggtatgngacacaaggaagccacctggggctgggaatgttctagttcttgatctgggagatggtcatgcagtcgtaggcctgtgtaagacttcctcgagctgtccacataagatttgtgcactttagctgaatgtggtggcttacgcctggagtcctagcactttgagaggctgaggtgggcggattgctagaggccaggagttcgagaccggcctgagcaacatggtgagccccctgactctaaaaaaaaaatttttttttttaattatctgagcatgctggcgtgcgcctgtggtcccagctacttaggaggccgaggtggagggattgcttgggcccaggagattgaggctgcagtgagctatgatcacaccacttcactccagcctgggcaacggagcgagaccctatctcaaaaaaaataaataaaatatttgtgcagtt End editing Edited EST: CB265900, type: ag Aligns to: chr7:73032438-73032695 (--) All mismatches: ag (59), ag (73), ag (87), ag (93), ag (128), ag (129), ag (164), ag (185), ag (192), ag (218), ag (228), Editing mismatches: 11, all mismatches: 11, alignment length: 258, cluster length: 170, total number of As: 48 Locations in RNA: 59 73 87 93 128 129 164 185 192 218 228 Locations in genome: 73032495 73032509 73032523 73032529 73032564 73032565 73032600 73032621 73032628 73032654 73032664 Upstream nucleotide (in genome): c a a c a t t a c c c Upstream nucleotide summary: a: 4, c: 5, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): a g c t t a c g t g c Downstream nucleotide summary: a: 2, c: 3, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 2, at: 1, ca: 1, cc: 1, cg: 1, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chr7:73032438-73032695 (-) cagcactttgggaggccaaggtgggtggatcacttgaggtcaggagttcgagaccagcctggccaacatgatgaagccccgtctctactaaaaatacaaaagtgagctgggtgtcatggcatatgcctgtaatcccagctactcagggggctgaggcacgagaatcatttgaacctgggagacggaagttgcagtgagccaagatcatgccactgcactccaacctgggtggcagaatgaggctccat-ctcaaaaaaa >CB265900:2-259 (-) cagcactttgggaggccaaggtgggtggatcgcttnaggtcgggagttcgagaccagcctggccaacgtgatgaggccccgtntntactaaaaatgcaaaagtgagctgggtgtcatggcatatgcctgtggtcccagctactcagggggctgaggcacgagaatcgtttgagcctgggagacggaggttgcagtgagccgagatcatgccactgcactccaacctggg-ggcagaatgaggctccattctcaaaaaaa End editing Edited EST: AW947301, type: ag Aligns to: chr7:74297420-74297639 (--) All mismatches: ag (47), ag (74), ag (79), ag (87), ag (100), ag (101), ag (103), Editing mismatches: 7, all mismatches: 7, alignment length: 221, cluster length: 57, total number of As: 18 Locations in RNA: 47 74 79 87 100 101 103 Locations in genome: 74297454 74297481 74297486 74297494 74297507 74297508 74297510 Upstream nucleotide (in genome): c c c t a t t Upstream nucleotide summary: a: 1, c: 3, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): a g a g t a t Downstream nucleotide summary: a: 3, c: 0, g: 2, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 2, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 1, other: 0 >chr7:74297420-74297639 (-) cgggaggtggaggttgcggtcagccgagatcgtgccactgcactccagcct-aggcaa-caagagtgaaactctgtcttaaaaaaaaaaaattaaaaattatattcgggccgggcttggtggctcaatcctataataccagcaccttaggaggccaaggcaggaggatcacttgaggccaggagttcaagaccggcctgggcaacataatgagaacccatct >AW947301:13-233 (-) cgggaggtggaggttgcggtcagccgagatcgtgccactgcactccagcctaaggcaatcaagagtgaaactctgtcttaaaaaaaaaaaattaaaaa-tatattcgggccgggcttggtggctcaatcctgtggtaccagcaccttgggaggccgaggcgggaggatcacttgaggccaggagttcgagaccggcctgggcaacataatgagaacccatct End editing Edited EST: DB371013, type: ag Aligns to: chr8:42388820-42389065 (--) All mismatches: ag (80), ag (108), ag (120), ag (121), ag (150), ag (153), ag (156), ag (162), ag (183), cg (204), ag (211), Editing mismatches: 10, all mismatches: 11, alignment length: 246, cluster length: 132, total number of As: 40 Locations in RNA: 80 108 120 121 150 153 156 162 183 211 Locations in genome: 42388899 42388927 42388939 42388940 42388969 42388972 42388975 42388981 42389002 42389030 Upstream nucleotide (in genome): a c a t a a t t t c Upstream nucleotide summary: a: 4, c: 2, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): c g t a t a c g g g Downstream nucleotide summary: a: 2, c: 2, g: 4, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 2, ca: 0, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 2, tt: 0, other: 0 >chr8:42388820-42389065 (-) ggcgtgagaggccgaggtgggcagatcacgaggtcaggagttcgagaccagcctgaccaacatagtgaaacccccgtctccactagaaatacaaaaattagccgggcatggtggtgcacgcctgtaatccagctagtcaggaggctgaggcaggagaatcgcttgaacctgggaggtggaggttgcagggagctgagatcacgccactgcactccagcctgggcgacagagtaagactcccgtctc >DB371013:1-246 (-) ggcgtgagagnccgaggtgggcanatcacgaggtcggganttggagaccagcntgaccaacatggtgaaacccccgtctccactggaaatgcagaagttagccgggcatggtggtgcacgcctgtggtccagctagtcgggaggctgaggcaggagaatcgcttgagcctgggaggtggaggttgcagggagctgagatcacgccactgcactccagcctgggcgacagagtaagactcccgtctc End editing Edited EST: DW424955, type: ag Aligns to: chr8:30527033-30527309 (--) All mismatches: ag (102), ag (118), ag (127), ag (143), ag (163), ag (169), ag (179), ag (228), ag (234), ct (263), ag (266), Editing mismatches: 10, all mismatches: 11, alignment length: 278, cluster length: 164, total number of As: 28 Locations in RNA: 102 118 127 143 163 169 179 228 234 266 Locations in genome: 30527125 30527141 30527150 30527166 30527186 30527192 30527202 30527251 30527257 30527288 Upstream nucleotide (in genome): t c t t c t t a c c Upstream nucleotide summary: a: 1, c: 4, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): g g g a c c g g c g Downstream nucleotide summary: a: 1, c: 3, g: 6, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 2, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 3, tt: 0, other: 0 >chr8:30527033-30527309 (-) cagagtctcactctgtcacccaggctggagtgcagtggcgcaatc-ttggctcactgcaagctctgcctcccgggttcatgccattctcctgcctcagcctcctgagtagctggggctacaggcacctgccaccacccctggctaattttttgtatttttagtagagacagggtttcaccgtgttagccaggatggtcttgatctcctgacctcatgatctgcccgccttggcctcccaaactgctggaattacaggtgtgagccaccacgcccggcc >DW424955:10-287 (-) cagagtctcactctgtcacccgggttggagtgcagtggcgcaatctttggctcgctgcaggctctgcctcccgggttcatgccattctcctgcctcagcctcctgagtggctggggctgcaggcgcctgccaccacccctggctgattttttgtatttttggtagagacggggtttcaccgtgttggccaggatggtcttgatctcctgacctcatgatctgcccgccttggcctcccaaactgctggaattacaggtgtgagccaccacgcccggcc End editing Edited EST: AI040487, type: ag Aligns to: chr8:110248161-110248478 (--) All mismatches: ag (22), ag (47), ag (82), ag (86), ag (100), ag (124), ag (145), ag (179), ag (187), ag (188), ag (190), Editing mismatches: 11, all mismatches: 11, alignment length: 317, cluster length: 169, total number of As: 52 Locations in RNA: 22 47 82 86 100 124 145 179 187 188 190 Locations in genome: 110248182 110248207 110248242 110248246 110248260 110248284 110248305 110248339 110248347 110248348 110248350 Upstream nucleotide (in genome): g g t c t a g c a t t Upstream nucleotide summary: a: 2, c: 2, g: 3, t: 4, other: 0 Downstream nucleotide (in genome): g g t g a a c c t a t Downstream nucleotide summary: a: 3, c: 2, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 1, ca: 0, cc: 1, cg: 1, ct: 0, ga: 0, gc: 1, gg: 2, gt: 0, ta: 2, tc: 0, tg: 0, tt: 2, other: 0 >chr8:110248161-110248478 (-) atgctacaacatggataaaccttgaaaacattatgctaagtgaaagaagccagtcataataggctacagatggtaggattccatttatatgaaaaggcagatctcgctgggcatggtggctcatgcctataatcctagcacttggggaggctgaggagggcagatcattagagaccagcctgggcagcatggcaaaaccccacttctaccacaaaaataacaaatattagccaggtatggtggcacatgactgaggtcggaggatcacctgagcccaggaggtcgaggctgaagtgagccatgattgcaccactgcac >AI040487:1-317 (-) atgctacaacatggataaaccttgaaaacattatgctaagtgaaagaagccagtcataataggctacagatggtaggattccatttatatgaaaaggcagatctcgctgggcatggtg-ctcatgcctgtggtcctagcgcttggggaggctgaggagggcagatcattagaggccagcctgggcagcatggcagaaccccacttctaccacaaaaatgacaaatattagccgggtgtggtggcacatgactgaggtcggaggatcacctgggcccaggaggtcgaggctgaagtgggccatgattgcaccactgcac End editing Edited EST: AI886654, type: ag Aligns to: chr8:8047613-8047886 (--) All mismatches: ag (76), ag (111), ag (136), ag (146), ag (152), Editing mismatches: 5, all mismatches: 5, alignment length: 272, cluster length: 77, total number of As: 19 Locations in RNA: 76 111 136 146 152 Locations in genome: 8047688 8047723 8047748 8047758 8047764 Upstream nucleotide (in genome): c t t t t Upstream nucleotide summary: a: 0, c: 1, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a g c g c Downstream nucleotide summary: a: 1, c: 2, g: 2, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 2, tt: 0, other: 0 >chr8:8047613-8047886 (-) cgaggaggagcttgcagtgagccgagattgcaccactgcactccagcctgggcaacagagccagactctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaattatctgggtgaagtggcaggtacctgtagtcccagctacttggggggctgagacaggagaatagattgaacctgggaggcggaagttgcagtggcccaagatcgcaccactgcactccagtctggtggcagagtgagactccatctaaaaacataaaaaaaaaatacacaaat >AI886654:1-272 (-) cgaggaggagcttgcagtgagccgagattgcaccactgcactccagcctgggcaacagagccagactctgtctc--aaaaaaaaaaaaaaaaaaaaaaaattatctgggtgaagtggcaggtgcctgtggtcccagctgcttggggggctgagacaggagaatggattgaacctgggaggcggaagttgcagtggcccgagatcgcaccactgcactccagtctggtggcagagtgagactccatctaaaaacataaaaaaaaaatacacaaat End editing Edited EST: H68088, type: ag Aligns to: chrX:103369549-103369669 (--) All mismatches: ag (15), ag (47), ag (48), ag (52), ag (72), ag (108), ag (112), ag (117), ag (118), Editing mismatches: 9, all mismatches: 9, alignment length: 121, cluster length: 104, total number of As: 30 Locations in RNA: 15 47 48 52 72 108 112 117 118 Locations in genome: 103369563 103369595 103369596 103369600 103369620 103369656 103369660 103369665 103369666 Upstream nucleotide (in genome): c a c g c t c a t Upstream nucleotide summary: a: 2, c: 4, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): g g a g g c g t a Downstream nucleotide summary: a: 2, c: 1, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 1, ca: 1, cc: 0, cg: 3, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 0 >chrX:103369549-103369669 (-) tgtaatcccagctactaggaaggctgaggcaagagaatcgcttgaaaccaggagatgggggttgcagtgagccaagatcacgccattgcactccagcctgggcgacagtgagactttgtct >H68088:1-121 (-) tgtggtcccggctgctaggaaggctgaggcaagagaatcgcttgaaaccgggagatgggggttgcagtgggccgggatcacgccattgcactccagcctgggcgacggtgagactttgtct End editing Edited EST: DW430598, type: ag Aligns to: chrX:119068113-119068376 (--) All mismatches: ag (9), ag (17), ag (35), ag (48), ag (62), ag (70), ag (75), ag (87), ag (191), Editing mismatches: 9, all mismatches: 9, alignment length: 264, cluster length: 183, total number of As: 37 Locations in RNA: 9 17 35 48 62 70 75 87 191 Locations in genome: 119068113 119068121 119068139 119068152 119068166 119068174 119068179 119068191 119068295 Upstream nucleotide (in genome): c c t a c g c a a Upstream nucleotide summary: a: 3, c: 4, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): n c c a c t a c c Downstream nucleotide summary: a: 2, c: 5, g: 0, t: 1, other: 1 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 0, ca: 1, cc: 2, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 1, tg: 0, tt: 0, other: 1 >chrX:119068113-119068376 (-) tgtcaggcaacagagtgcagtggttcgatgtcagctaactacaacctccgcctcccaggttcaagcgattctcatgtcccaacctcccgagtagctgggattataggcacccaccaccatgcctggctaatttttgtgtttttagtagagatggggcttcaccatgttggccaggctggtttcgaactcctgacctcaagtgatcctcccaccttggcctcccaaagtgctgggattacaggagtgagccactgcacccggcca >DW430598:9-272 (-) tgtcaggcaacagagtgcagtggttcgatgtcagctaactacaacctccgcctcccaggttcaagcgattctcatgtcccagcctcccgagtagctgggattataggcacccaccaccatgcctggctaatttttgtgtttttagtagagatggggcttcaccatgttggccaggctggtttcgagctcctgacctcgagtggtcctcccgccttggcctcccagagtgctgggattgcaggagtgagccactgcgcccggccg End editing Edited EST: BU566239, type: ac Aligns to: chr12:104659496-104659690 (++) All mismatches: ac (183), ac (184), ac (185), ac (186), ac (187), ac (190), ac (195), ac (196), Editing mismatches: 8, all mismatches: 8, alignment length: 197, cluster length: 12, total number of As: 12 Locations in RNA: 183 184 185 186 187 190 195 196 Locations in genome: 104659676 104659677 104659678 104659679 104659680 104659683 104659686 104659687 Upstream nucleotide (in genome): a a a a a a a a Upstream nucleotide summary: a: 8, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a a a a Downstream nucleotide summary: a: 8, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 8, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr12:104659496-104659690 (+) gccgccggccggctgtcaagcagttccacgactccaagatcaagttcccgctgccccaccgggtcctgcgccgtcagcacaagccacgcttcaccaccaagaggcccaacaccttcttctaggtgcagggccctcgtccgggtgtgccccaaataaactcaggaacgccccggtggaaaaaaaaaaaa--aaaaaaa >BU566239:3-199 (+) gccgccggccggctgtcaagcagttccacgactccaagatcaagttcccgctgccccaccgggtcctgcgccgtcagcacaagccacgcttcaccaccaagaggcccaacaccttcttctaggtgcagggccctcgtccgggtgtgccccaaataaactcaggaacgccccggtggaaaacccccaacttaaccaaa End editing Edited EST: CN293616, type: ac Aligns to: chr16:30108405-30108750 (++) All mismatches: ac (348), ac (349), ac (351), ac (352), ac (355), Editing mismatches: 5, all mismatches: 5, alignment length: 345, cluster length: 7, total number of As: 6 Locations in RNA: 348 349 351 352 355 Locations in genome: 30108743 30108744 30108746 30108747 30108749 Upstream nucleotide (in genome): t a g a a Upstream nucleotide summary: a: 3, c: 0, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): a g a a g Downstream nucleotide summary: a: 3, c: 0, g: 2, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr16:30108405-30108750 (+) gggtgctcttgggattgcaaccagcgcaagcagcacccttctgcagaagtaaagatgccttgctgggaagtcttctgtctcagtgctggtttttcttgactacactgagcacttgttttcaacaaatttgagggtcttctgggatcccattctcctttgggaggggtagcgattacttttcctcgtgagacacgtcccactgccttgttgcagtggcccaaggagcggaggatcgggtccacccaaagtgaggaataaatccggactttcagcaacgtgggcaggaaggagccttaaaattcccaggcaagtgggtaactctgtgcacagaccaaggtaagaa-aag >CN293616:12-356 (+) gggtgctcttgggattgcaaccagcgcaagcagcacccttctgcagaagtaaagatgccttgctgggaagtcttctgtctcagtgctggtttttcttgactacactgagcacttgttttcaacaaatttgagggtcttctgggatcccattctcctttgggaggggtagcgattacttttcctcgtgagacacgtcccactgccttgttgcagtggcccaaggagcggaggatcgggtccacccaaagtgaggaataaatccggactttcagcaacgtgggcaggaaggagccttaaaattcccaggcaagtgggtaactctgtgcacagaccaag--ccgccgacg End editing Edited EST: DA673801, type: ac Aligns to: chr16:30108407-30108750 (++) All mismatches: ac (335), ac (336), ac (338), ac (339), ac (342), Editing mismatches: 5, all mismatches: 5, alignment length: 343, cluster length: 7, total number of As: 6 Locations in RNA: 335 336 338 339 342 Locations in genome: 30108743 30108744 30108746 30108747 30108749 Upstream nucleotide (in genome): t a g a a Upstream nucleotide summary: a: 3, c: 0, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): a g a a g Downstream nucleotide summary: a: 3, c: 0, g: 2, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr16:30108407-30108750 (+) gtgctcttgggattgcaaccagcgcaagcagcacccttctgcagaagtaaagatgccttgctgggaagtcttctgtctcagtgctggtttttcttgactacactgagcacttgttttcaacaaatttgagggtcttctgggatcccattctcctttgggaggggtagcgattacttttcctcgtgagacacgtcccactgccttgttgcagtggcccaaggagcggaggatcgggtccacccaaagtgaggaataaatccggactttcagcaacgtgggcaggaaggagccttaaaattcccaggcaagtgggtaactctgtgcacagaccaaggtaagaa-aag >DA673801:1-343 (+) gtgctcttgggattgcaaccagcgcaagcagcacccttctgcagaagtaaagatgccttgctgggaagtcttctgtctcagtgctggtttttcttgactacactgagcacttgttttcaacaaatttgagggtcttctgggatcccattctcctttgggaggggtagcgattacttttcctcgtgagacacgtcccactgccttgttgcagtggcccaaggagcggaggatcgggtccacccaaagtgaggaataaatccggactttcagcaacgtgggcaggaaggagccttaaaattcccaggcaagtgggtaactctgtgcacagaccaag--ccgccgacg End editing Edited EST: AV733113, type: ac Aligns to: chr18:19040587-19040900 (++) All mismatches: ac (294), ac (295), ac (296), ac (308), ac (310), Editing mismatches: 5, all mismatches: 5, alignment length: 311, cluster length: 20, total number of As: 8 Locations in RNA: 294 295 296 308 310 Locations in genome: 19040880 19040881 19040882 19040897 19040899 Upstream nucleotide (in genome): g a a a a Upstream nucleotide summary: a: 4, c: 0, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): a a c a a Downstream nucleotide summary: a: 4, c: 1, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 3, ac: 1, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr18:19040587-19040900 (+) cactgtgcatagcccttttttgattgtttagttggttctctctcccattctccacagtggctgtcatggactccatttcactcctcaaaccccagacttcatccctcatccttctctcttagcaaatgaccatgctaccccacccaaagaaaaaaacaaacaaaaacttcaaataaaaacttgcctctaggccaggcatggtggctcatgcctataatcccagcactttgggagactgagtcaggtggatcacctgaggtcaggagttcgagaccagccgggccaacatagtgaaaccctgtctctattaaaaa >AV733113:1-311 (+) cactgtgcatagcccttttttgattgtttagttggttctctctcccattctccacagtggctgtcatggactccatttcactcctcaaaccccagacttcatccctcatccttctctcttagcaaatgaccatgctaccccacccaaagaaaaaaacaaacaaaaacttcaaataaaaacttgcctctaggccaggcatggtggctcatgcctataatcccagcactttgggagactgagtcaggtggatcacctgaggtcaggagttcgagaccagccgggccaacatagtgccc---tgtctctattacaca End editing Edited EST: N40135, type: ca Aligns to: chr1:196670448-196670702 (++) All mismatches: ca (269), ca (270), ca (271), ca (272), ca (274), Editing mismatches: 5, all mismatches: 5, alignment length: 255, cluster length: 6, total number of Cs: 5 Locations in RNA: 269 270 271 272 274 Locations in genome: 196670697 196670698 196670699 196670700 196670702 Upstream nucleotide (in genome): a c c c a Upstream nucleotide summary: a: 2, c: 3, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): c c c a n Downstream nucleotide summary: a: 1, c: 3, g: 0, t: 0, other: 1 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 0, ca: 1, cc: 2, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr1:196670448-196670702 (+) gctttaccctctgaacttctgatcgaaggtcatccctctccagcttgagtggatcaaagatgacaagggccaatggaaccaagtttgagtcttgccaggtcaatacttgggtcctgagtatggtgactagtatctgttttgttatgtgtgtattattccagccagaatgggaaatgctaattcagctcctccaggcagcccaatggggctgg-tggctttgagattattaaactctttctctgctgcaaaccccac >N40135:20-274 (+) gctttaccctctgaacttctgatcgaaggtcatccctctccagcntgagtggatcaaagatgacaagggccaatggaaccaagtttgagtcttgccaggtcaatacttgggtcctgagtatggtgactagtatctgttttgttatgtgtgtattattccagccagaatgggaaatgctaattcagctcctccaggcagcccaatgggn-tgggtggctttgagattattaaactctttctctgctgcaaaaaaaaa End editing Edited EST: BU853380, type: ac Aligns to: chr1:199025573-199025868 (++) All mismatches: ac (283), ac (284), ac (285), ac (286), ac (287), at (289), ac (290), ac (291), ac (292), ac (293), ac (296), ac (297), Editing mismatches: 11, all mismatches: 12, alignment length: 295, cluster length: 15, total number of As: 15 Locations in RNA: 283 284 285 286 287 290 291 292 293 296 297 Locations in genome: 199025854 199025855 199025856 199025857 199025858 199025861 199025862 199025863 199025864 199025867 199025868 Upstream nucleotide (in genome): c a a a a a a a a a a Upstream nucleotide summary: a: 10, c: 1, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a a a a a a n Downstream nucleotide summary: a: 10, c: 0, g: 0, t: 0, other: 1 Dinucleotide summary: aa: 9, ac: 0, ag: 0, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr1:199025573-199025868 (+) ggtcgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgtggtagcgggtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactccgtctcaaaaaaaaaaaaaaa >BU853380:3-297 (+) ggtcgggcgcggtggctcacgcctgtaatcccagcactttgggaggccgaggcgggcagatcacgaggtcaggagatcgagaccatcctggctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccgggcgtggtagcgggtgcctgtagtcccagctactcaggaggctgaggcaggagaatggcgtgaacccgggaggcggagcttgcagtgagccgagatcgcgccactgcactccagcctgggcgacagagcgagactccgtc-ccccccatccccaacc End editing Edited EST: BG926771, type: ca Aligns to: chr1:196670557-196670702 (++) All mismatches: ca (433), ca (434), ca (435), ca (436), ca (438), Editing mismatches: 5, all mismatches: 5, alignment length: 146, cluster length: 6, total number of Cs: 5 Locations in RNA: 433 434 435 436 438 Locations in genome: 196670697 196670698 196670699 196670700 196670702 Upstream nucleotide (in genome): a c c c a Upstream nucleotide summary: a: 2, c: 3, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): c c c a n Downstream nucleotide summary: a: 1, c: 3, g: 0, t: 0, other: 1 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 0, ca: 1, cc: 2, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr1:196670557-196670702 (+) ggtcctgagtatggtgactagtatctgttttgttatgtgtgtattattccagccagaatgggaaatgctaattcagctcctccaggcagcccaatggggctggtggctttgagattattaaactctttctctgctgcaaaccccac >BG926771:293-438 (+) ggtcctgagtatggtgactagtatctgttttgttatgtgtgtattattccagccagaatgggaaatgctaattcagctcctccaggcagcccaatggggctggtggctttgagattattaaactctttctctgctgcaaaaaaaaa End editing Edited EST: DW431567, type: ca Aligns to: chr21:9827005-9827243 (++) All mismatches: ca (249), ca (250), ca (253), ca (254), ca (255), Editing mismatches: 5, all mismatches: 5, alignment length: 239, cluster length: 7, total number of Cs: 5 Locations in RNA: 249 250 253 254 255 Locations in genome: 9827237 9827238 9827241 9827242 9827243 Upstream nucleotide (in genome): a c a c c Upstream nucleotide summary: a: 2, c: 3, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): c a c c n Downstream nucleotide summary: a: 1, c: 3, g: 0, t: 0, other: 1 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 0, ca: 1, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr21:9827005-9827243 (+) tacctggttgatcctgccagtagcatatgcttgtctcaaagattaagccatgcatgtctaagtacgcacggccggtacagtgaaactgcgaatggctcattaaatcagttatggttcctttggtcgctcgctcctctcctacttggataactgtggtaattctagagctaatacatgccgacgggcgctgacccccttcgcgggggggatgcgtgcatttatcagatcaaaaccaaccc >DW431567:17-255 (+) tacctggttgatcctgccagtagcatatgcttgtctcaaagattaagccatgcatgtctaagtacgcacggccggtacagtgaaactgcgaatggctcattaaatcagttatggttcctttggtcgctcgctcctctcctacttggataactgtggtaattctagagctaatacatgccgacgggcgctgacccccttcgcgggggggatgcgtgcatttatcagatcaaaaaaaaaaa End editing Edited EST: BX394701, type: ca Aligns to: chr2:217340007-217340176 (++) All mismatches: ca (62), ca (93), ca (95), ca (102), ca (132), Editing mismatches: 5, all mismatches: 5, alignment length: 170, cluster length: 71, total number of Cs: 25 Locations in RNA: 62 93 95 102 132 Locations in genome: 217340068 217340099 217340101 217340108 217340138 Upstream nucleotide (in genome): t t a c a Upstream nucleotide summary: a: 2, c: 1, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): g a c a c Downstream nucleotide summary: a: 2, c: 2, g: 1, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 0, other: 0 >chr2:217340007-217340176 (+) cgcatcgatggctccacctcatcagctgagcgggaggacctgtgccagcagttccaactgtcggagaggcatgctgtggccgtgctgtccatcaccgctgccaatatgggcctcaccttctcctcggctgacctggtggtgtttgctgagctgttttggaacccaggggt >BX394701:1-170 (+) cgcatcgatggctccacctcatcagctgagcgggaggacctgtgccagcagttccaactgtaggagaggcatgctgtggncgtgctgtnnataaacgctgcaaatatgggcctcaccttctcctcggctgaactggtggtgtttgctgagctgttttggaanccaggggt End editing Edited EST: BG925269, type: ac Aligns to: chr4:33739114-33739419 (++) All mismatches: ac (74), ac (75), ac (76), ac (78), ac (80), ac (84), Editing mismatches: 6, all mismatches: 6, alignment length: 309, cluster length: 9, total number of As: 7 Locations in RNA: 74 75 76 78 80 84 Locations in genome: 33739114 33739115 33739116 33739118 33739120 33739122 Upstream nucleotide (in genome): n a a a g g Upstream nucleotide summary: a: 3, c: 0, g: 2, t: 0, other: 1 Downstream nucleotide (in genome): a a a g g a Downstream nucleotide summary: a: 4, c: 0, g: 2, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr4:33739114-33739419 (+) aaaaagag--a-ataaaatcatgtcctttgcagaaacatggatgaaactggaggtcattatcttcagtgaaataaaccatgcataaaaagtcaagcattgcatgttattgtaagtagcttaactccaaaatgcattttaaaacattttttcccttttctcttttcttcctattctccatctaaccttgaaacaaactgcagaagcttttcttcttaaccttaaaatagatttcatatccctcccttgcacactgtatatttccttcacatttatctaactgtatgctagtatctaattatgtgcttact >BG925269:74-382 (+) cccacgcgtccgataaaatcatgtcctttgcagaaacatggatgaaactggaggtcattatcttcagtgaaataaaccatgcataaaaagtcaagcattgcatgttattgtaagtagcttaactccaaaatgcattttaaaacattttttcccttttctcttttcttcctattctccatctaaccttgaaacaaactgcagaagcttttcttcttaaccttaaaatagatttcatatccctcccttgcacactgtatatttccttcacatttatctaactgtatgctagtatctaattatgtgcttact End editing Edited EST: T54195, type: ac Aligns to: chr6:43582552-43582832 (++) All mismatches: ac (278), ac (279), ac (280), ac (281), ac (284), Editing mismatches: 5, all mismatches: 5, alignment length: 284, cluster length: 7, total number of As: 5 Locations in RNA: 278 279 280 281 284 Locations in genome: 43582826 43582827 43582828 43582829 43582832 Upstream nucleotide (in genome): c a a a c Upstream nucleotide summary: a: 3, c: 2, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a c n Downstream nucleotide summary: a: 3, c: 1, g: 0, t: 0, other: 1 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr6:43582552-43582832 (+) taaaaagtgtgtgggccttggagtctaagagacgtggttgcaaacttagctctggttattgcaatgagggccttgaacaagtcattttcttcacattctcatctgtaaaatggagataataccttacagattattgcagattaataacaatgtattcaaattatgtaactcggccgggtacaatggctcacgcctgtaatcctaacactttggg-aggccgaggcagacagatcacctgaggtcagg-agtttgagaccagcctgg-ccaacatggcaaaacca >T54195:1-284 (+) taaaaagtgtgtgggccttggagtctaagagacgtggttgcaaacttagctctggttattgcaatgagggccttgaacaagtcattttcttcacattctcatctgtaaaatggagataataccttacagattattgcagattaataacaatgtattcaaattatgtaactcggccgggtacaatggctcacgcctgtaatcctaacactttggggaggccgaggcagacagatcacctgaggtcagggagtttgagaccagcctgggccaacatggcccccccc End editing Edited EST: AW863599, type: ac Aligns to: chr6:99319513-99319828 (++) All mismatches: ac (196), ta (247), ac (254), ac (256), ac (258), ac (262), ac (264), ac (275), ac (284), ac (307), ac (312), Editing mismatches: 10, all mismatches: 11, alignment length: 318, cluster length: 115, total number of As: 33 Locations in RNA: 196 254 256 258 262 264 275 284 307 312 Locations in genome: 99319700 99319758 99319760 99319762 99319765 99319767 99319778 99319787 99319809 99319814 Upstream nucleotide (in genome): t g a a a g a t g t Upstream nucleotide summary: a: 4, c: 0, g: 3, t: 3, other: 0 Downstream nucleotide (in genome): a a a g g c t t a g Downstream nucleotide summary: a: 4, c: 1, g: 3, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 2, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 2, gc: 1, gg: 0, gt: 0, ta: 1, tc: 0, tg: 1, tt: 1, other: 0 >chr6:99319513-99319828 (+) actgtattattcatcagcaggtactttgtgggatatatttgattcaattttgtattactgaactactggtagcaatggtgaacttcatttgctctcatagtttctgatagattaaacatcaatggttcagttatcttttgtcagatacagaagatgaatatgctgatttgcccaaccacattggcataatagtgttagttctattgtgagcttttgcgttcagggctgatattgacatttttctgaaaaa-gaagacatgtcctcaatcactatta-tggaacactgaatggctttggaattta-gcttttgctcaaga >AW863599:10-327 (+) actgtatta-tcatcagcaggtactttgtgggatatatttgattcaattttgtattactgaactactggtagcaatggtgaacttcatttgctctcatagtttctgatagattaaacatcaatggttcagttatcttttgtcagatacagaagatgaatatgctgatttgcccaaccacattggcatcatagtgttagttctattgtgagcttttgcgttcagggctgatattgacatatttctgcacacagacgccatgtcctcactcactattcatggaacactgaatggctttggcatttcagcttttgctcaaga End editing Edited EST: DW436235, type: ac Aligns to: chr7:130807596-130807808 (++) All mismatches: ac (203), ac (214), ac (221), ac (222), ac (223), Editing mismatches: 5, all mismatches: 5, alignment length: 213, cluster length: 21, total number of As: 21 Locations in RNA: 203 214 221 222 223 Locations in genome: 130807782 130807793 130807800 130807801 130807802 Upstream nucleotide (in genome): c a a a a Upstream nucleotide summary: a: 4, c: 1, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a Downstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 0, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr7:130807596-130807808 (+) cggtgaaaccccatctctactaaaaatacaaaaaaaattagccgggtgtggtggcccgcgcctgtagtcccagctactcgggaggctgaggcaggagaacggcgtgaacccgggaggcggagcttgcagtgagccgagatagcgccactgcagtccggcctgggcgaaacagcgagactccgtctcaaaaaaaaaaaaaaaaaaaaaaaaaaa >DW436235:17-229 (+) cggtgaaaccccatctctactaaaaatacaaaaaaaattagccgggtgtggtggcccgcgcctgtagtcccagctactcgggaggctgaggcaggagaacggcgtgaacccgggaggcggagcttgcagtgagccgagatagcgccactgcagtccggcctgggcgaaacagcgagactccgtctccaaaaaaaaaacaaaaaacccaaaaaa End editing Edited EST: BF827174, type: ac Aligns to: chr10:103908934-103909086 (+-) All mismatches: ac (119), ac (127), ac (182), ac (184), ac (197), ac (201), ac (207), ac (245), Editing mismatches: 8, all mismatches: 8, alignment length: 153, cluster length: 127, total number of As: 26 Locations in RNA: 119 127 182 184 197 201 207 245 Locations in genome: 103909065 103909057 103909002 103909000 103908987 103908983 103908977 103908939 Upstream nucleotide (in genome): c c c c c c c c Upstream nucleotide summary: a: 0, c: 8, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a g a c t g t a Downstream nucleotide summary: a: 3, c: 1, g: 2, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 3, cc: 1, cg: 2, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr10:103908934-103909086 (+) gggacaactacggcttcgtcacttatcgctatgctgaggaggcatttgcagccattgagagtggccacaagctgcggcaggcagatgagcagccctttgatctctgctttgggggccgaaggcagttctgcaagaggagctattctgatcttg >BF827174:98-250 (-) gggaccactacggcttcgtcacttatcgctatgctgaggaggcctttgccgcccttgagagtggcccccagctgcggcaggcagatgagcagccctttgatctctgctttgggggccgaaggccgttctgccagaggagctattctgatcttg End editing Edited EST: AU143922, type: ac Aligns to: chr10:135262700-135263261 (+-) All mismatches: ac (455), ac (474), gc (482), ac (487), ac (491), ac (495), ac (517), ac (523), ac (537), ac (544), ac (560), Editing mismatches: 10, all mismatches: 11, alignment length: 561, cluster length: 107, total number of As: 47 Locations in RNA: 455 474 487 491 495 517 523 537 544 560 Locations in genome: 135262807 135262787 135262774 135262770 135262766 135262744 135262738 135262724 135262717 135262701 Upstream nucleotide (in genome): a a c g a a a t a c Upstream nucleotide summary: a: 6, c: 2, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): c c c c c c c c c c Downstream nucleotide summary: a: 0, c: 10, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 6, ag: 0, at: 0, ca: 0, cc: 2, cg: 0, ct: 0, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr10:135262700-135263261 (+) cactacctgggttcaaaacatactacaaagctatagtaaccaaaacagcatggtactggtatgaaaacagacacacagggcagttgaacaaaatgcagaacccataaacaaatccacattagccctaactgacttttgacaaaagtgccaagaacacacttggggaaagtacaccctcttcaataaatggtgctgggaaaactggatattcatatgcagaaaataaaactaggcctctatctttcaccatataaaaatcaactcaaaatggattaaagacttaaatgtaagatccaaactataatactaccagaagaaaatataggggaaatgagtcaggacattggtttgggcaaagattttatgaacaaaacttcagaagcactggtaatgaaagcaaaaatggacaaatgggcatatatcaatctaaaattgctctgcacagcacaggaaacaaatgacaaggtaacaaccaacagaatgggagaaaatattcacaaattatccatctgaccaggagtgaataatcagaatatataaggaattcaaacaattgaatagc >AU143922:1-561 (-) ccctaccnggnttcaaaccatnctccaaagctatngtacccaaaccngcatggnactggtatgaaaccagccncccaggccagttgaccaaaatgcag-acccataaccaaatccacattagccctaactgacttttgacaaaagtgccaagaacacacttggggaaagtacaccctcttcaataaatggtgctgggaaaactggatattcatatgcagaaaataaaactaggcctctatctttcaccatataaaaatcaactcaaaatggattaaagacttaaatgtaagatccaaactataatactaccagaagaaaatataggggaaatgagtcaggacattggtttgggcaaagattttatgaacaaaacttcagaagcactggtaatgaaagcaaaaatggacaaatgggcatatatcaatctaaaattgctctgcacagcacaggaaacaaatgacaaggtaacaaccaacagaatgggagaaaatattcacaaattatccatctgaccaggagtgaataatcagaatatataaggaattcaaacaattgaatagc End editing Edited EST: BG988906, type: ac Aligns to: chr12:120636355-120636529 (+-) All mismatches: ac (4), ac (7), tc (16), ac (23), ac (78), ac (83), ac (98), ac (108), ac (131), ac (135), ac (170), ac (176), Editing mismatches: 11, all mismatches: 12, alignment length: 173, cluster length: 175, total number of As: 40 Locations in RNA: 4 7 23 78 83 98 108 131 135 170 176 Locations in genome: 120636529 120636526 120636508 120636453 120636448 120636433 120636423 120636400 120636396 120636361 120636355 Upstream nucleotide (in genome): c g c c c c c c c c n Upstream nucleotide summary: a: 0, c: 9, g: 1, t: 0, other: 1 Downstream nucleotide (in genome): n t c a g c t c a g c Downstream nucleotide summary: a: 2, c: 4, g: 2, t: 2, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 2, cc: 3, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 0, tg: 0, tt: 0, other: 2 >chr12:120636355-120636529 (+) acctccaggaagcgagaatgcagagtttcctctgtgatatcaagcacttcagggttgtagatgctgccattgtcgaacacctgctggatgaccagcccaaaggagaagggggagatgttgagcatgttcagcagcgtggcttcgctggctcccactttgtctccagtcttgatca >BG988906:4-176 (-) ccctcccggaagcgagaatgcagagtttcctctgtgatatccagcccttcagggttgtagatgctgcccttgtcgaacccctgctggatgacccgccccaaggagaagggggagatgttgagcatgttcagcagcgtggcttcgctggctccccctt-gtccccag-cttgctcc End editing Edited EST: AA329044, type: ca Aligns to: chr12:93906428-93906712 (+-) All mismatches: ca (44), ca (46), ca (47), ca (49), ca (51), ca (52), Editing mismatches: 6, all mismatches: 6, alignment length: 285, cluster length: 9, total number of Cs: 6 Locations in RNA: 44 46 47 49 51 52 Locations in genome: 93906712 93906710 93906709 93906707 93906705 93906704 Upstream nucleotide (in genome): a c a a c a Upstream nucleotide summary: a: 4, c: 2, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): n a c a a c Downstream nucleotide summary: a: 3, c: 2, g: 0, t: 0, other: 1 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 0, ca: 2, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr12:93906428-93906712 (+) acagattgttattacatgttccataatttaacaattgtcattgaagttggtgattgtcttgatattgcacatctgtaagaagtaatcaaactattgtgaatttgatagaatgctttaagttttattttccaacaaaagaatgtctacatacggcaaattcatagatctggaatccatttatgtcatcaaaagaggatttaaatttaattgtaagcttatatgatacattgttctaactggcaactaatgaaggattaaaaatgaattttgaaaataccacaccac >AA329044:44-328 (-) acagattgttattacatgttccataatttaacaattgtcattgaagttggtgattgtcttgatattgcacatctgtaagaagtaatcaaactattgtgaatttgatagaatgctttaagttttatttnccaacaaaagaatgtctacatacggcaaattcatagatctggaatccatttatgtcatcaaaagaggatttaaatttaattgtaagcttatatgatacattgttctaactggcaactaatgaaggattaaaaatgaattttgaaaataaaaaaaaaa End editing Edited EST: BU532936, type: ac Aligns to: chr16:2012053-2012272 (+-) All mismatches: ac (215), ac (216), ac (218), ac (220), ac (221), ac (222), Editing mismatches: 6, all mismatches: 6, alignment length: 220, cluster length: 9, total number of As: 6 Locations in RNA: 215 216 218 220 221 222 Locations in genome: 2012061 2012060 2012057 2012055 2012054 2012053 Upstream nucleotide (in genome): a t c a a n Upstream nucleotide summary: a: 3, c: 1, g: 0, t: 1, other: 1 Downstream nucleotide (in genome): c a g c a a Downstream nucleotide summary: a: 3, c: 2, g: 1, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 2, ag: 0, at: 0, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 1 >chr16:2012053-2012272 (+) aaacagtaa-cacgcttaattcactttatttttcttgtataaaaaccctatgttgtagccacagctggagcctgagtccgctgcacggagactctggtgtgggtcttgacgaggtggtcagtgaactcctgatagggagacttggtgaatacagtctccttccagaggtcgggggtcaggtagctgtaggtcttagaaatggcatcaaaggtggccttggc >BU532936:3-222 (-) ccccc-tcctcacgcttaattcactttatttttcttgtataaaaaccctatgttgtagccacagctggagcctgagtccgctgcacggagactctggtgtgggtcttgacgaggtggtcagtgaactcctgatagggagacttggtgaatacagtctccttccagaggtcgggggtcaggtagctgtaggtcttagaaatggcatcaaaggtggccttggc End editing Edited EST: R02800, type: ca Aligns to: chr17:34339544-34339931 (+-) All mismatches: ca (337), ca (347), ca (349), ca (366), ca (369), ca (386), ca (388), Editing mismatches: 7, all mismatches: 7, alignment length: 388, cluster length: 52, total number of Cs: 17 Locations in RNA: 337 347 349 366 369 386 388 Locations in genome: 34339598 34339588 34339586 34339569 34339566 34339549 34339547 Upstream nucleotide (in genome): a a c g g a c Upstream nucleotide summary: a: 3, c: 2, g: 2, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a a a Downstream nucleotide summary: a: 7, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 0, at: 0, ca: 2, cc: 0, cg: 0, ct: 0, ga: 2, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr17:34339544-34339931 (+) tcccacaggggatttgaacgtgcagcagccttgcaaatgagccacaccccgtcacaagtcctgtgaggaagtcagggaactctcctctgttagcccaagtggcgccatcaagtaaacccctgccattttgtacaccctgatcagggaggaaacttccataggggctcaggccatgaaaagcattttgccaagcagatcccaggccacactgcctgactgcaggaaatggctcccttattacatcctgccaggcagctagccacactgccccacctcccctgtccagacctataattgccccagtctgtacgcaggacgggggctccagcactcgctggtgttccccttccacaggtttctctgtccaataaacctatgttgctgtcga >R02800:4-391 (-) tccaaaaggggatttgaacgtgaagaagccttgnaaatgagcaaaancccgtcaaaantcctgtgaggaagtcagggaactctcctctgttagcccaagtggcgccatcaagtaaacccctgccattttgtacaccctgatcagggaggaaacttccataggggctcaggccatgaaaagcattttgccaagcagatcccaggccanactgcctgactgcaggaaatggctcccttattacatcctgccaggcagctagccanactgccccacctcccctgtccagacctataattgccccagtctgtacgcaggacgggggctccagcactcgctggtgttccccttccacaggtttctctgtccaataaacctatgttgctgtcga End editing Edited EST: BQ355072, type: ac Aligns to: chr17:47782482-47782645 (+-) All mismatches: ac (199), ac (213), ac (231), ac (252), ac (255), ac (259), ac (265), ac (301), ac (304), ac (345), cg (347), Editing mismatches: 10, all mismatches: 11, alignment length: 164, cluster length: 147, total number of As: 39 Locations in RNA: 199 213 231 252 255 259 265 301 304 345 Locations in genome: 47782633 47782619 47782601 47782580 47782577 47782573 47782567 47782531 47782528 47782487 Upstream nucleotide (in genome): c c c c t c c c c c Upstream nucleotide summary: a: 0, c: 9, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): a a a g a a g a a a Downstream nucleotide summary: a: 8, c: 0, g: 2, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 7, cc: 0, cg: 2, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr17:47782482-47782645 (+) ataccaagagtagctctccatagccgactgtgtgttcttctatcccaacaactttcttgggtttgtacatgaaaagggccactccagccacaattaacagcacacacaggtacttggccaacgggtacttcttcttcaagagggtcaccccaaggagcatgact >BQ355072:187-350 (-) atagccagagtagctctccatagccgactgtgtgttcttctatccccaccactttcttgggtttgtacatgaaaagggccactcccgccaccattcaccgcacacacaggtacttggcccacgggtacttcttcttccagagggtcacccccaggagcatgact End editing Edited EST: BG988666, type: ac Aligns to: chr19:47112470-47112592 (+-) All mismatches: ac (45), ac (59), ac (62), ac (90), ac (93), ac (97), ac (126), Editing mismatches: 7, all mismatches: 7, alignment length: 123, cluster length: 82, total number of As: 28 Locations in RNA: 45 59 62 90 93 97 126 Locations in genome: 47112561 47112547 47112544 47112516 47112513 47112509 47112480 Upstream nucleotide (in genome): c c c c c c c Upstream nucleotide summary: a: 0, c: 7, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a c a a Downstream nucleotide summary: a: 6, c: 1, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 6, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr19:47112470-47112592 (+) ctctctcttcaacactcccctgcgtaccccggttctagcaaacaccaattgattgactgagaatctgataaagcaacaaaagatttgtcccaagctgcatgattgctctttctccttcttccc >BG988666:14-136 (-) ctctctcttccacactcccctgcgtaccccggttctagccaacccccattgattgactgagaatctgataaagccaccaaagatttgtccccagctgcatgattgctctttctccttcttccc End editing Edited EST: DB301241, type: ac Aligns to: chr1:10456983-10457487 (+-) All mismatches: ac (468), ac (478), ac (479), ac (498), ac (500), Editing mismatches: 5, all mismatches: 5, alignment length: 507, cluster length: 32, total number of As: 19 Locations in RNA: 468 478 479 498 500 Locations in genome: 10457021 10457012 10457011 10456992 10456990 Upstream nucleotide (in genome): t a c c c Upstream nucleotide summary: a: 1, c: 3, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): c c a c c Downstream nucleotide summary: a: 1, c: 4, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 0, ca: 1, cc: 2, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr1:10456983-10457487 (+) cacacacacacacaaaagaaatgaaaacaacaatttgt-acatgagttcaaaacagaattatttatttcccaaactagaaacaatccaaatgtctatcaacagataaatggataagcaaatgatgacacaattgcattaatggaataccactcagcaatgaaaaggaacaaaccactcatacctacaacacagatgagcctcagaaacgtgatgctaagtgaaagaagccagaccaaaaaaattatatgctattattccatttctatgaaatttctggaaaaggcaaaaaccatgcaaagtagatcagaggttggctgggggtgagagcagagactgactacaaataggcccaagggaacgttttggggtgatggaag-ttttctataagtggattatggtgatggctacacaacagtataaattaaaggtcatccaaatgtgtacttacaatgtttgaattgtatgacatgtaaattatctcattaaatctgtattttaaaaaaag >DB301241:1-507 (-) cacacacccccncaaaagaaatgaaanccccaatttgtaccatgagttcaaaacagaattatttatttcccaaactagaaacaatccaaatgtctatcaacagataaatggataagcnaatgatgacacaattgcattaatggaataccactcagcaatgaaaaggaacaaaccactcatacctacaacacagatgagcctcagaaacgtgatgctaagtgaaagaagccagaccaaaaaaattatatgctattattccatttctatgaaatttctggaaaaggcaaaaaccatgcaaagtagatcagaggttggctgggggtgagagcagagactgactacaaataggcccaagggaacgttttggggtgatggaaggttttctataagtggattatggtgatggctacacaacagtataaattaaaggtcatccaaatgtgnacttacaatgtttgaattgtatgacatgtaaattatctcattaaatctgtattttaaaaaaag End editing Edited EST: BF176150, type: ac Aligns to: chr2:89157065-89157212 (+-) All mismatches: ac (317), ac (320), ac (322), ac (323), ac (324), Editing mismatches: 5, all mismatches: 5, alignment length: 147, cluster length: 9, total number of As: 6 Locations in RNA: 317 320 322 323 324 Locations in genome: 89157211 89157207 89157205 89157204 89157203 Upstream nucleotide (in genome): c g a a g Upstream nucleotide summary: a: 2, c: 1, g: 2, t: 0, other: 0 Downstream nucleotide (in genome): a a g a a Downstream nucleotide summary: a: 4, c: 0, g: 1, t: 0, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 2, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr2:89157065-89157212 (+) tatccaccttccactgtactttggcctctctgggatagaagttattcagcaggcacacaacagaggcagttccagatttcaactgctcatcagatggcgggaagatgaagacagatggtgcagccacagttcct-g-aggaaagaagcaa >BF176150:316-462 (-) tatccaccttccactgtactttgg-ctctctgggatagaagttattcagcaggcacacaacagaggcagttccagatttcaactgctcatcagatggcgggaagatgaagacagatggtgcagccacagttccttggag-cccgc-gcca End editing Edited EST: CV347623, type: ac Aligns to: chr3:155628902-155629068 (+-) All mismatches: ac (261), ac (282), ac (302), ac (336), ac (353), ac (359), ac (385), ac (394), ac (397), ga (413), ac (414), Editing mismatches: 10, all mismatches: 11, alignment length: 167, cluster length: 154, total number of As: 49 Locations in RNA: 261 282 302 336 353 359 385 394 397 414 Locations in genome: 155629065 155629044 155629024 155628990 155628973 155628967 155628941 155628932 155628929 155628912 Upstream nucleotide (in genome): c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 10, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a g t a a g g a g Downstream nucleotide summary: a: 5, c: 0, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 5, cc: 0, cg: 4, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr3:155628902-155629068 (+) ggttttactcagtggtggagtagactcaacagtttgtacagctttgctaaatcgtgctttgaaccaagaacaagtcattgctgtgcacattgataatggctttatgagaaaacgagaaagccagtctgttgaagaggccctcaaaaagcttggaattcaggtcaaag >CV347623:258-424 (-) ggttttactccatggtggagtagactccaccgtttgtaccgctttgctaaatcgtgctttgaacccagaaccagtcattgctgtgcaccttgataatggctttatgagaaaacgagaaagnccgtctgttgaagaggccctccaaaagcttggaattcaggtccaag End editing Edited EST: BI836265, type: ac Aligns to: chr4:88295850-88295986 (+-) All mismatches: ac (434), ac (450), ac (461), ac (467), ac (469), ac (488), ac (492), ac (513), ac (525), ac (534), ac (540), Editing mismatches: 11, all mismatches: 11, alignment length: 138, cluster length: 106, total number of As: 40 Locations in RNA: 434 450 461 467 469 488 492 513 525 534 540 Locations in genome: 88295968 88295952 88295941 88295935 88295933 88295915 88295911 88295890 88295878 88295869 88295863 Upstream nucleotide (in genome): c a c c t c c c c c c Upstream nucleotide summary: a: 1, c: 9, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): a a t c c a a a a t a Downstream nucleotide summary: a: 7, c: 2, g: 0, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 6, cc: 1, cg: 0, ct: 2, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr4:88295850-88295986 (+) cccagaaatgtgcaagtacattaacttcaaaagtcttttcaatctgaggatcttgtgtagcaaacaaatctgatgtatagact-acaccagcattatttactaaaatactaacatctccaatttctgccttcaccttc >BI836265:416-553 (-) cccagaaatgtgccagtaccttaacttccaaagtcttttccatctgaggatcttgtgtagccaaccaatctgatgtatagactacccccagccttatttactacaatactaacatctcccatttctgccttcaccttc End editing Edited EST: BE966981, type: ac Aligns to: chr5:145882935-145883102 (+-) All mismatches: ac (31), ac (46), ac (51), ac (55), ac (74), ac (89), ac (94), ac (101), ac (118), ac (130), ca (196), Editing mismatches: 10, all mismatches: 11, alignment length: 168, cluster length: 100, total number of As: 47 Locations in RNA: 31 46 51 55 74 89 94 101 118 130 Locations in genome: 145883100 145883085 145883080 145883076 145883057 145883042 145883037 145883030 145883013 145883001 Upstream nucleotide (in genome): c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 10, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a t g a a g a c a a Downstream nucleotide summary: a: 6, c: 1, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 6, cc: 1, cg: 2, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr5:145882935-145883102 (+) cagattaaatcggatttctttgaactattatctaatcatcacttggacagtcagtctcgatggagcaaagtaaaagacaaagtagaaagtgatccacgttacaaagcagtagatagttcatcaatgagagaagaccttttcaaacagtacattgaaaaaatagccaag >BE966981:29-196 (-) aagattaaatcggatttctttgaactattatctaatcatcacttggacagtcagtctcgatggagccaagtaaaagaccaagtagaaagtgatccccgttaccaagccgtagatagttcatccatgagagaagaccttttccaaccgtaccttgaaaaaatagcccag End editing Edited EST: BG205406, type: ac Aligns to: chr8:77396174-77396317 (+-) All mismatches: ac (118), ac (119), ac (120), ac (208), ac (210), ac (211), Editing mismatches: 6, all mismatches: 6, alignment length: 143, cluster length: 95, total number of As: 21 Locations in RNA: 118 119 120 208 210 211 Locations in genome: 77396317 77396316 77396315 77396226 77396224 77396223 Upstream nucleotide (in genome): a a g g a c Upstream nucleotide summary: a: 3, c: 1, g: 2, t: 0, other: 0 Downstream nucleotide (in genome): n a a t g a Downstream nucleotide summary: a: 3, c: 0, g: 1, t: 1, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 1, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr8:77396174-77396317 (+) tttaaacaactaacatttatttctcacagttctggagatttgaaagtccaagatcaagatgccagctgactcagtttaatgtgagggcttccgtcttctctggcagaccccagctttcttgttgttcttctcacatgctagaaa >BG205406:118-260 (-) tttaaacaactaacatttatttctcacagttctggagatttgaaagtccccgctcaagatgccagctgactcagtttaatgtgagggcttccgtcttctctggcagaccccagctttcttgttgttcttctcacatgct-gccc End editing Edited EST: BU565288, type: ac Aligns to: chr13:31035091-31035320 (-+) All mismatches: ac (221), ac (224), ac (225), ac (227), ac (230), ac (231), ac (233), ac (234), Editing mismatches: 8, all mismatches: 8, alignment length: 233, cluster length: 12, total number of As: 12 Locations in RNA: 221 224 225 227 230 231 233 234 Locations in genome: 31035103 31035102 31035101 31035099 31035096 31035095 31035093 31035092 Upstream nucleotide (in genome): a a a a a a a a Upstream nucleotide summary: a: 8, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a a a a Downstream nucleotide summary: a: 8, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 8, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr13:31035091-31035320 (-) agccctgtcctggtggtattttcaatagccactaaccttgcctggtacagtatgggggttgtaaattggcatggaaatttaaagcaggttcttgttggtgcacagcacaaattagttatatatggggatggtagttttttcatcttcagttgtctctgatgcagcttatacgaaataattgttgttctgttaactgaataccactctgtaattgcaa-a--aaaaaaaaaaaa >BU565288:3-235 (+) agccctgtcctggtggtattttcaatagccactaaccttgcctggtacagtatgggggttgtaaattggcatggaaatttaaagcaggttcttgttggtgcacagcacaaattagttatatatggggatggtagttttttcatcttcagttgtctctgatgcagcttatacgaaataattgttgttctgttaactgaataccactctgtaattgcaancnnccacaaccacca End editing Edited EST: BU940475, type: ac Aligns to: chr16:88868979-88869246 (-+) All mismatches: ac (263), ac (264), ac (265), ac (266), ac (267), Editing mismatches: 5, all mismatches: 5, alignment length: 265, cluster length: 5, total number of As: 5 Locations in RNA: 263 264 265 266 267 Locations in genome: 88868983 88868982 88868981 88868980 88868979 Upstream nucleotide (in genome): c a a a a Upstream nucleotide summary: a: 4, c: 1, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a n Downstream nucleotide summary: a: 4, c: 0, g: 0, t: 0, other: 1 Dinucleotide summary: aa: 3, ac: 0, ag: 0, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr16:88868979-88869246 (-) gggcgcgatggttcacgcctgtaatcccagcactttgaaaggccgaggcgggcggatcacctgaggtcaggagttcgagaccagcctgaccaacatggtaaaaccccctctctactaaaaatacaaaaattagccaggcgtggtggcgggcgcctgtaattccaactgcttggggggctgaggcagcagaatcgcttgaacccgggaggcgaaatggcgccactgcacttcagcctgagcgaaagagcgagaaactccgtctcaaaaa >BU940475:3-267 (+) gggcgcgatggttcacgcctgtaatcccagcactttgaaaggccgaggc-gg-ggatcacctgaggtcaggagttcgagaccagcctgaccaacatggtaaaaccccctctctactaaaaatacaaaaattagccaggcgtggtggcgggcgcctgtaattccaactgcttggggggctgaggcagcagaatcgcttgaacccgggaggcgaaatggcgccactgcacttcagcctgagcgaaagagcgagaaactccgtc-cccccc End editing Edited EST: BG571285, type: ac Aligns to: chr1:25971010-25971305 (-+) All mismatches: ac (279), ac (282), ac (286), ac (291), ac (296), Editing mismatches: 5, all mismatches: 5, alignment length: 298, cluster length: 17, total number of As: 17 Locations in RNA: 279 282 286 291 296 Locations in genome: 25971028 25971025 25971021 25971017 25971012 Upstream nucleotide (in genome): a a a a a Upstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a Downstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 5, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr1:25971010-25971305 (-) cgtggtggcgcatgcctgtaatcccagcactttgggaggctgaggcaggaggatcgctttgagcccaagagttcaaaaccaggctgggtcacatggcaaaaccccatctccacaaaaacgcaaaacaattagctgggtgttggtggcacgctcctgtagtaccagagaggctgaggctggagaattgcttgaacccgggagacggacgctacagtgagcccagatcgcaccactgtactccagcctgggtgacaggg-tgagaccttgtctcaaaaaaaaaaaaaaaaa-aaaaaaaa >BG571285:1-298 (+) cgtggtggcgcatgcctgtaatcccagcactttgggaggctgaggcaggaggatcgctttgagcccaagagttcaaaaccaggctgggtcacatggcaaaaccccatctccacaaaaacgcaaaacaattagctgggtgttggtggcacgctcctgtagtaccagagaggctgaggctggagaattgcttgaacccgggagacggacgctacagtgagcccagatcgcaccactgtactccagcctgggtgacaggggtgagaccttgtctcaaaaaacaacaaacaaatcaaaacaa End editing Edited EST: BF244931, type: ac Aligns to: chr1:48661864-48662012 (-+) All mismatches: ac (125), ac (127), ac (129), ac (132), ac (136), ac (140), ac (143), ac (146), ca (148), ac (149), ac (150), Editing mismatches: 10, all mismatches: 11, alignment length: 150, cluster length: 25, total number of As: 23 Locations in RNA: 125 127 129 132 136 140 143 146 149 150 Locations in genome: 48661888 48661886 48661884 48661881 48661877 48661874 48661871 48661868 48661865 48661864 Upstream nucleotide (in genome): a a a a a a a a c a Upstream nucleotide summary: a: 9, c: 1, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a a a a a n Downstream nucleotide summary: a: 9, c: 0, g: 0, t: 0, other: 1 Dinucleotide summary: aa: 8, ac: 0, ag: 0, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr1:48661864-48662012 (-) cgcggtggctcacgcctgtaatcccagctctcagggaggctaagaggcgggaggatagcttgagcccaggagttcgagacctgcctgggcaatatagcgagaccccgttctccagaaaaaggaaaaaaaaaaacaaa-aaaaaaaaacaa >BF244931:1-150 (+) cgcggtggctcacgcctgtaatcccagctctcagggaggctaagaggcgggaggatagcttgagcccaggagttcgagacctgcctgggcaatatagcgagaccccgttctccagaaaaaggaacacacaacacacatacaacaacaacc End editing Edited EST: BG928758, type: ca Aligns to: chr20:36726410-36726592 (-+) All mismatches: ca (253), ca (257), ca (262), ca (263), ca (265), ca (266), Editing mismatches: 6, all mismatches: 6, alignment length: 180, cluster length: 15, total number of Cs: 6 Locations in RNA: 253 257 262 263 265 266 Locations in genome: 36726424 36726419 36726414 36726413 36726411 36726410 Upstream nucleotide (in genome): g t a c a c Upstream nucleotide summary: a: 2, c: 2, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): a a c a c n Downstream nucleotide summary: a: 3, c: 2, g: 0, t: 0, other: 1 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 1 >chr20:36726410-36726592 (-) atttaatgaatgtttacaactcaacaacagaaaagataactcaattcaaaaatgggcagaggacttgaatagacatttctccaaagaagatatacaaatggccaacaagccatttggccatgttgttatggccaacatgacaagatgctcaatgtcattagaaaaatgcaaatcaaaaccacc >BG928758:87-266 (+) atttaatgaatgtttacaactcaacaacagaaaagataactcaattcaaaaatgggcagaggacttgaatagacatttctccaaagaagatatacaaatggccaacaagccatttggccatgttgttatggccaacatgacaagatgctcaatgtcattagaaaaa--aaaa-aaaaaaaaaa End editing Edited EST: DB360517, type: ac Aligns to: chr21:46669430-46669892 (-+) All mismatches: ac (421), ac (422), ac (437), ac (438), ac (454), ac (457), Editing mismatches: 6, all mismatches: 6, alignment length: 462, cluster length: 38, total number of As: 24 Locations in RNA: 421 422 437 438 454 457 Locations in genome: 46669472 46669471 46669456 46669455 46669438 46669435 Upstream nucleotide (in genome): c a t a c c Upstream nucleotide summary: a: 2, c: 3, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): a c a g a a Downstream nucleotide summary: a: 4, c: 1, g: 1, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 3, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr21:46669430-46669892 (-) aagagatggggtctcgctctgttgcccaggctgcagtgcagtggcatgatcgtagctcaccatagcctggaattcttgggcccaagcaatcctcccacctcagcctcctgagtagctaggactacgggtacatgccaccacactcagctaggtttttttcccccctccatattttgtagagacagggtctcactatgttgcccaggctggtctcgaaatcctggcttcaagtgatcccctcacctcagccgcccaaggtgctaggattacaggcgtgcagcattgctcctgccactttagactctaagataaacagtagattaaagttttgagattccccaccaaaacaacaggaatagagaatataattctcaaagtagtgtgaaggagtgaaagtgggataagcagaaagaatgaatcaaccaaaagaaggggt-aagaaaggagaaaaaaacaacaaaagg >DB360517:1-462 (+) aagagatggggtctcgctctgttgcccaggctgcagtgcagtggcatgatcgtagctcaccatagcctggaattcttgggcccaagcaatcctcccacctnagcctcctgagtagctaggactacgggtacatgccaccacactcagctaggtttttttcccccctccatattttgtagagacagggtctcactatgttgcccaggctggtctcgaaatcctggcttcaagtgatcccctcacctcanccgnccaaggngctaggattacaggcgtgcancattgntcctgccactttagactctaagataaacagtagattaaagttttgagantccccaccaaaacaacaggaatagagaatataattctcaaagtagtgtgaaggagtgaaagtgggatnagcngaaagaatgaatccccnaaa-gaaggggtncc-aaaggngaaaaaaaccnccnaagg End editing Edited EST: BG495040, type: ac Aligns to: chr3:196797437-196797743 (-+) All mismatches: ac (292), ac (296), ac (298), ac (303), ac (306), Editing mismatches: 5, all mismatches: 5, alignment length: 307, cluster length: 15, total number of As: 15 Locations in RNA: 292 296 298 303 306 Locations in genome: 196797452 196797448 196797446 196797441 196797438 Upstream nucleotide (in genome): a a a a a Upstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a Downstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 5, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr3:196797437-196797743 (-) tggccaggtgcggtggctcacacctgtaatcccagcactttgggaggccaaggcagacagatcacgtgagctcagaggttcaatatcagcctggccaacatggtgaaaccagtctctactaaaaatagaaaaattagttgggcatggtgctatatacctgcagtgccaggtagtcaggtgtctgagacacaagaatagaatcgcttaaacctaggaggcagaggttgcagtgagctgagatcgtgccactgcactccagcctgggcaacaaagggagactatctcaaaaaaaaaaaaaaaaaaaaaa >BG495040:1-307 (+) tggccaggtgcggtggctcacacctgtaatcccagcactttgggaggccaaggcagacagatcacgtgagctcagaggttcaatatcagcctggccaacatggtgaaaccagtctctactaaaaatagaaaaattagttgggcatggtgctatatacctgcagtgccaggtagtcaggtgtctgagacacaagaatagaatcgcttaaacctaggaggcagaggttgcagtgagctgagatcgtgccactgcactccagcctgggcaacaaagggagactatctcaaaaaacaaacacaaaacaaca End editing Edited EST: DW419630, type: ac Aligns to: chr6:31803695-31803991 (-+) All mismatches: ac (243), ac (244), ac (248), ac (256), ac (259), Editing mismatches: 5, all mismatches: 5, alignment length: 294, cluster length: 20, total number of As: 18 Locations in RNA: 243 244 248 256 259 Locations in genome: 31803758 31803757 31803753 31803742 31803739 Upstream nucleotide (in genome): a a a a a Upstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a t Downstream nucleotide summary: a: 4, c: 0, g: 0, t: 1, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr6:31803695-31803991 (-) ggccgggcacagcggctcacgaggtcaggagatggagaccatcctggccaacatggtgaaaccccttctactaaaaacagaaaaattagccgagtgtggtggcgcgggcctgtagtcccagctaatcggcaggctgaggcaggacaatcgattgaacccgggaggcagaggttgcagggagatcgtaccattgccagcccgggcaacaagatcaagactccatctcaaaaaaaaaaaaaaaaaaaggaaaaaattggctaaggtgggagaatcggttaaacccgggagttgaaggcc >DW419630:10-303 (+) ggccgggcacagcggctcacgaggtcaggagatggagaccatcctggccaacatggtgaaaccccttctactaaaaacagaaaaattagccgagtgtggtggcgcgggcctgtagtcccagctaatcggcaggctgaggcaggacaatcgattgaacccgggaggcagaggttgcagggagatcgtaccattgccagcccgggcaacaagatcaagactccatctcaaaaaaaccaaacaaa---ggaacaacttggctaaggtgggagaatcggttaaacccgggagttgaaggcc End editing Edited EST: BM450513, type: ac Aligns to: chr9:15510110-15510329 (-+) All mismatches: ac (367), ac (368), ac (375), ac (386), ac (403), Editing mismatches: 5, all mismatches: 5, alignment length: 221, cluster length: 36, total number of As: 11 Locations in RNA: 367 368 375 386 403 Locations in genome: 15510147 15510146 15510139 15510128 15510112 Upstream nucleotide (in genome): c a a c t Upstream nucleotide summary: a: 2, c: 2, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): a g g t a Downstream nucleotide summary: a: 2, c: 0, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 2, at: 0, ca: 1, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 0 >chr9:15510110-15510329 (-) agcaggcgcgtcgggacgccccgaggcatcctcccccgcccgcgggcccggtagctgggcccgcgtccgccgcccgcatccccgcgccgccgcatctcctcgccgcctcccgggcttcggacccccggtctcgcccccgaaacatgactcgcgatttcaaacctggagacctcatcttcgccaagatgaaaggttatcccca-tt-ggccagctcgagtaag >BM450513:185-405 (+) agcaggcgcgtcgggacgccccgaggcatcctcccccgcccgcgggcccggtagctgggcccgcgtccgccgcccgcatccccgcgccgccgcatctcctcgccgcctcccgggcttcggacccccggtctcgcccccgaaacatgactcgcgatttcaaacctggagacctcatcttcgccccgatgaacggttatcccccctttggccagctcgag-cag End editing Edited EST: GD144372, type: ca Aligns to: chrX:57671227-57671424 (-+) All mismatches: ca (100), ct (288), ca (290), ca (291), ca (292), ca (293), ca (294), ca (295), ca (296), ca (297), ca (298), ca (299), Editing mismatches: 11, all mismatches: 12, alignment length: 200, cluster length: 198, total number of Cs: 42 Locations in RNA: 100 290 291 292 293 294 295 296 297 298 299 Locations in genome: 57671424 57671236 57671235 57671234 57671233 57671232 57671231 57671230 57671229 57671228 57671227 Upstream nucleotide (in genome): n c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 10, g: 0, t: 0, other: 1 Downstream nucleotide (in genome): t c c c c c c c c c n Downstream nucleotide summary: a: 0, c: 9, g: 0, t: 1, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 9, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 2 >chrX:57671227-57671424 (-) ctgt-gt-tagttaccatagctctgtattattgtcccattgagcttggaagtatttcttactgccctattttttgacttagtttgagtaaaattagtattagtttttttttgttttgttttgtttttttaatgtttggtagaattcagcagtgaagccattgagtccctggcttttatttcctccccccccccccccccc >GD144372:100-299 (+) atgtggtgtagttaccatagctctgtattattgtcccattgagcttggaagtatttcttactgccctattttttgacttagtttgagtaaaattagtattagtttttttttgttttgttttgtttttttaatgtttggtagaattcagcagtgaagccattgagtccctggcttttatttcctccccctcaaaaaaaaaa End editing Edited EST: AA996289, type: ca Aligns to: chr10:71912196-71912350 (--) All mismatches: ca (54), ca (56), ca (58), ca (60), ca (67), ca (94), ca (103), ca (122), ca (123), ca (145), Editing mismatches: 10, all mismatches: 10, alignment length: 155, cluster length: 92, total number of Cs: 24 Locations in RNA: 54 56 58 60 67 94 103 122 123 145 Locations in genome: 71912246 71912248 71912250 71912252 71912259 71912286 71912295 71912314 71912315 71912337 Upstream nucleotide (in genome): c t t g t t g c c c Upstream nucleotide summary: a: 0, c: 4, g: 2, t: 4, other: 0 Downstream nucleotide (in genome): a c t t c a a c c c Downstream nucleotide summary: a: 3, c: 5, g: 0, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 1, cc: 3, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 1, ta: 1, tc: 2, tg: 0, tt: 1, other: 0 >chr10:71912196-71912350 (-) aggggaatgtgaccctgaaggagctgaatgctcgccccatggaagtgttcatgtgcagtgtgctcaagaggcaaggttacggcgagggtttccgctggctctcccagtatattgactgatgtttggacggtgaaaataaaagagttttacttctc >AA996289:4-158 (-) aggggaatgtgacactgaaggagctgaatgctcgcaacatggaagtgttcatgtgaagtgtgctaaagaggcaaggttacggcgagggtttacgctggatatacaagtatattgactgatgtttggacggtgaaaataaaagagttttacttctc End editing Edited EST: BG988342, type: ac Aligns to: chr12:56575266-56575383 (--) All mismatches: ac (372), ac (378), ac (384), ac (434), ac (447), ac (453), ac (458), Editing mismatches: 7, all mismatches: 7, alignment length: 118, cluster length: 87, total number of As: 29 Locations in RNA: 372 378 384 434 447 453 458 Locations in genome: 56575289 56575295 56575301 56575351 56575364 56575370 56575375 Upstream nucleotide (in genome): c c c c c c c Upstream nucleotide summary: a: 0, c: 7, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a g a a g g g Downstream nucleotide summary: a: 3, c: 0, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 3, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr12:56575266-56575383 (-) aggtgaacagcccagattcagatcgacgggacaagaaggggggaaactataagaagaggaagcgctccccctctccttcaccaaccccagaagcaaagaagaaaaatgctaagaaagg >BG988342:349-466 (-) aggtgaaccgccccgattccgatcgacgggaccagaaggggggaaactataagaagaggaagcgctccccctctccttcacccacccccgaagccaagaagaaaaatgctaagaaagg End editing Edited EST: BG988991, type: ac Aligns to: chr12:44917074-44917269 (--) All mismatches: ac (101), ac (131), ac (151), ac (165), ac (177), ac (181), ac (215), ac (224), ac (233), ac (242), gc (251), Editing mismatches: 10, all mismatches: 11, alignment length: 197, cluster length: 142, total number of As: 42 Locations in RNA: 101 131 151 165 177 181 215 224 233 242 Locations in genome: 44917097 44917127 44917147 44917161 44917173 44917177 44917211 44917220 44917229 44917238 Upstream nucleotide (in genome): c c c c g c c c c c Upstream nucleotide summary: a: 0, c: 9, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): g a t g a t a t a g Downstream nucleotide summary: a: 4, c: 0, g: 3, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 3, cc: 0, cg: 3, ct: 3, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr12:44917074-44917269 (-) agatattgatgagtgtgggaccgggaggcacagctgtgccaatgataccatttgcttcaatttggatggcggatatgattgtcgatgtcctcatggaaagaattgcacaggggactgcatccatgatggaaaagttaagcacaatggtcagatttgggtgttggaaaatgaca-ggtgctctgtgtgctcatgtcag >BG988991:77-273 (-) agatattgatgagtgtgggacccggaggcaccgctgtgcccatgataccctttgcttccatttggatggcggatatgattgtcgatgtcctcctggcaagaattgcaccggggactgcatccctgatggaaaagttaagcaccatggtcagatttgggtgttggaaaatgaccaggtgctctgtgtgctcatgtcag End editing Edited EST: BE966823, type: ac Aligns to: chr12:48081658-48081789 (--) All mismatches: ac (57), ac (62), ac (65), ac (74), ac (77), ac (79), ac (89), ac (106), ac (109), ac (136), ag (148), ac (152), Editing mismatches: 11, all mismatches: 12, alignment length: 132, cluster length: 97, total number of As: 46 Locations in RNA: 57 62 65 74 77 79 89 106 109 136 152 Locations in genome: 48081676 48081681 48081684 48081693 48081696 48081698 48081708 48081725 48081728 48081755 48081772 Upstream nucleotide (in genome): c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 11, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): t g g g a c a g a a a Downstream nucleotide summary: a: 5, c: 1, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 5, cc: 1, cg: 4, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr12:48081658-48081789 (-) cct-aggctttagcatccaaagaaaactcatatccaaaggaagctgacatagtgattaagtcaacagaaggagagcgaaagcaaattgaagcacaacagaataagcagcaggccatttcagagaaagatcggg >BE966823:39-170 (-) cctcaggctttagcatcccaag-gaactcatatcccaaggaagctgacatagtgattaagtccaccgaaggagagcgaaagccaattgaagccccaccgaataagccgccggccctttcagagaaagatcggg End editing Edited EST: BG991978, type: ac Aligns to: chr13:113210364-113210539 (--) All mismatches: ac (132), ac (139), ac (147), ac (162), ac (175), ac (188), ac (205), gc (238), ac (239), ac (265), ac (272), ac (281), Editing mismatches: 11, all mismatches: 12, alignment length: 176, cluster length: 150, total number of As: 40 Locations in RNA: 132 139 147 162 175 188 205 239 265 272 281 Locations in genome: 113210387 113210394 113210402 113210417 113210430 113210443 113210460 113210494 113210520 113210527 113210536 Upstream nucleotide (in genome): c c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 11, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): g a a g a a a g g a g Downstream nucleotide summary: a: 6, c: 0, g: 5, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 6, cc: 0, cg: 5, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr13:113210364-113210539 (-) gacagtctaatcaagctccaggagtaggagattgccttcgacagcagttggggtcacgactcgcatggactttaactgcaaatcagccttcttcacaagccactacctcaaaaggtgtccccagtgctgtgtctcgcaacatgacaaggtccaggagagaaggggatacgggtggt >BG991978:109-284 (-) gaccgtctaatccagctcccggagtaggagattgccttcgacagcccttggggtcacgactcgcatggactttaactgccaatcagccttcttcaccagccactacctccaaaggtgtcccccgtgctgtgtctcgccacatgaccaggtcccggagagaaggggatacgggtggt End editing Edited EST: CV391039, type: ac Aligns to: chr15:62199462-62199591 (--) All mismatches: ac (89), ac (101), ac (105), ac (129), ac (145), ac (172), ac (193), Editing mismatches: 7, all mismatches: 7, alignment length: 131, cluster length: 103, total number of As: 31 Locations in RNA: 89 101 105 129 145 172 193 Locations in genome: 62199478 62199490 62199493 62199516 62199532 62199559 62199580 Upstream nucleotide (in genome): a c c c c c c Upstream nucleotide summary: a: 1, c: 6, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): c a g g g a g Downstream nucleotide summary: a: 2, c: 1, g: 4, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 0, ca: 2, cc: 0, cg: 4, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr15:62199462-62199591 (-) agtgggtcaccagaagaaatggtcttgctgccaagacaggctcgactttttgcctgggcagatcctactggtacca-gaaaacttacatggacatatgca-gcaaatgttggggaacatgatctgttaaagg >CV391039:74-204 (-) agtgggtcacccgaagaaatggtcttgctgcccagacaggctcgactttttgcctgggccgatcctactggtacccagaaaacttacatggacatatgccagccaatgttggggacc-tgatctgttaaagg End editing Edited EST: CV350716, type: ac Aligns to: chr2:169939877-169940097 (--) All mismatches: ac (11), ac (22), ac (26), ag (57), ac (69), ac (73), ac (108), ac (151), ac (168), ac (172), ac (204), ac (213), Editing mismatches: 11, all mismatches: 12, alignment length: 222, cluster length: 202, total number of As: 55 Locations in RNA: 11 22 26 69 73 108 151 168 172 204 213 Locations in genome: 169939881 169939891 169939895 169939938 169939942 169939977 169940020 169940037 169940041 169940073 169940082 Upstream nucleotide (in genome): c c c c c c c g c c g Upstream nucleotide summary: a: 0, c: 9, g: 2, t: 0, other: 0 Downstream nucleotide (in genome): g g g g a a a t a c a Downstream nucleotide summary: a: 5, c: 1, g: 4, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 4, cc: 1, cg: 4, ct: 0, ga: 1, gc: 0, gg: 0, gt: 1, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr2:169939877-169940097 (-) cttaagctgtcattgaaaccttccactgcatatttggatggagtatagccccctccaacgattgcaaggcgacctccaacactggagacattaataactctcccttgagctttcttgaccaaaggaagcatatttagtgtcacactgatgagtccaaacaggttcacttcaataggttctctgtagtcctctagtgtcagccagtca-gtgggagccagcac >CV350716:7-228 (-) cttaagctgtcattgcaaccttcccctgcatatttggatggagtatagccccctcccacgcttgcaaggcgacctcccacactggagacattaataactctcccttgagctttcttgacccaaggaagcatatttagtgtcacactgatgagtcccaaccggttcacttcagtaggttctctgtagtcctctagtgtcagcccgtccagtgggagcccgcac End editing Edited EST: AU147930, type: ac Aligns to: chr2:128025023-128025568 (--) All mismatches: ac (498), ac (506), ac (512), ac (520), ac (542), ac (545), Editing mismatches: 6, all mismatches: 6, alignment length: 545, cluster length: 48, total number of As: 30 Locations in RNA: 498 506 512 520 542 545 Locations in genome: 128025521 128025529 128025535 128025543 128025565 128025568 Upstream nucleotide (in genome): a a a a c n Upstream nucleotide summary: a: 4, c: 1, g: 0, t: 0, other: 1 Downstream nucleotide (in genome): c c c c a a Downstream nucleotide summary: a: 2, c: 4, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 4, ag: 0, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr2:128025023-128025568 (-) aacaacagcaagactct-gtctcaaaacaaaaaaacaaaaaccaaaaaaccatagtgagacccagtctctttaagaaaaaaaataaaaaagaaaaatcctaaccaagaattccatatcctgccaaactaagctacatgagcaaagaagaaataaaatctttcccagacaagcaactgctaaaagaatttgttatcaccagactggccctacaagagagtcttgagagttctaaacatggaaatgaaagaatggtgacacctgctaccacaaaaatacacataagcacatagcccacagaccctgtaaagcaactacacaatccaaactacagagcaaccagctaatgacaccatgttaggaataaagcctcatgtctcaatattaaccttgaatgtaaacaacctaaacaccccacctaaaagacttggagtggcaaattggattaaaaacaagacccagccttctgctgtcttcaagagacctctctcacatgtaacaggactcataggttcaaagtaaagggatagggaaaaaaatctatcacac >AU147930:1-545 (-) caccacagcaagnnt-tngtctcaaaccaaaaanccaaaacccaaaaacccatagtgagacccagtctctttaag-aaaanaataaaaaagaaaaatcctaaccaagaattccatatcctgccaaactaagctacatgagcaaagaagaaataaaatctttcccagacaagcaactgctaaaagaatttgttatcaccagactggccctacaagagagtcttgagagttctaaacatggaaatgaaagaatggtgacacctgctaccacaaaaatacacataagcacatagcccacagaccctgtaaagcaactacacaatccaaactacagagcaaccagctaatgacaccatgttaggaataaagcctcatgtctcaatattaaccttgaatgtaaacaacctaaacaccccacctaaaagacttggagtggcaaattggattaaaaacaagacccagccttctgctgtcttcaagagacctctctcacatgtaacaggactcataggttcaaagtaaagggatagggaaaaaaatctatcacac End editing Edited EST: BF852380, type: ac Aligns to: chr3:168819849-168820015 (--) All mismatches: ac (59), ac (99), ac (110), ac (122), ac (128), ac (144), ac (148), ac (161), ac (182), ac (206), Editing mismatches: 10, all mismatches: 10, alignment length: 167, cluster length: 148, total number of As: 38 Locations in RNA: 59 99 110 122 128 144 148 161 182 206 Locations in genome: 168819849 168819889 168819900 168819912 168819918 168819934 168819938 168819951 168819972 168819996 Upstream nucleotide (in genome): c c c c c c c c c c Upstream nucleotide summary: a: 0, c: 10, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): n g a g a g g g g t Downstream nucleotide summary: a: 2, c: 0, g: 6, t: 1, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 2, cc: 0, cg: 6, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr3:168819849-168820015 (-) gatgtcagctattgaaaacatggcagaaaagctagagagcttcagtgccctgaaacctgaggccagtgagctcttacagtcagtgccctctatgttcaacttcagggcgcctcccaatgccctgccagagaaccttctgcggaagggaaaggagcgctatacctgca >BF852380:59-225 (-) gatgtcagctattgaaaacctggcagaaaagctagagagcttccgtgccctgaaacctgaggcccgtgagctcttaccgtccgtgccctctatgttccacttccgggcgcctccccatgccctgcccgagaaccttctgcggaagggaaaggagcgctatacctgcc End editing Edited EST: BG989130, type: ac Aligns to: chr5:134910261-134910375 (--) All mismatches: ac (116), ac (125), ac (134), ac (146), ac (161), ac (194), ac (206), ac (209), Editing mismatches: 8, all mismatches: 8, alignment length: 115, cluster length: 94, total number of As: 25 Locations in RNA: 116 125 134 146 161 194 206 209 Locations in genome: 134910275 134910284 134910293 134910305 134910320 134910353 134910365 134910368 Upstream nucleotide (in genome): g c c c c c c c Upstream nucleotide summary: a: 0, c: 7, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a g a c Downstream nucleotide summary: a: 6, c: 1, g: 1, t: 0, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 5, cc: 1, cg: 1, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr5:134910261-134910375 (-) catcaccaccaagagcgtgtccaggtaccgaggtcaggagcactgcctgcaccccaagctgcagagcaccaagcgcttcatcaagtggtacaacgcctggaacgagaagcgcagg >BG989130:102-216 (-) catcaccccccagagcgtgtcccggtaccgaggtcaggagcactgcctgcacccccagctgcagagcacccagcgcttcatccagtggtaccacgcctggcacgagaagcgcagg End editing Edited EST: BE965144, type: ac Aligns to: chr5:180665098-180665243 (--) All mismatches: ac (251), ac (258), ac (265), ac (348), ac (357), ac (372), ac (377), Editing mismatches: 7, all mismatches: 7, alignment length: 147, cluster length: 126, total number of As: 30 Locations in RNA: 251 258 265 348 357 372 377 Locations in genome: 180665107 180665113 180665120 180665203 180665212 180665227 180665232 Upstream nucleotide (in genome): c c c c c c c Upstream nucleotide summary: a: 0, c: 7, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a g g a a t g Downstream nucleotide summary: a: 3, c: 0, g: 3, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 3, cc: 0, cg: 3, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr5:180665098-180665243 (-) ccaggatggccaggccatgttatgggatctcaacgaaggcaaacacctttacacgctagatggtggggacatcatcaacgccctgtgcttcagccctaaccgctactggctgtgtgctgccacaggcccca-gcatcaagatctggg >BE965144:242-388 (-) ccaggatggcccggccctgttatgggatctccacgaaggccaacacctttacacgctagatggtggggacatcatcaacgccctgtgcttcagccctaaccgctactggctgtgtgctgccaccggcccccagcatccagatctggg End editing Edited EST: BF085411, type: ac Aligns to: chr7:121011354-121011477 (--) All mismatches: ac (103), ac (118), ac (131), ac (150), ac (170), ac (190), ac (200), Editing mismatches: 7, all mismatches: 7, alignment length: 124, cluster length: 98, total number of As: 29 Locations in RNA: 103 118 131 150 170 190 200 Locations in genome: 121011376 121011391 121011404 121011423 121011443 121011463 121011473 Upstream nucleotide (in genome): c c c c c c c Upstream nucleotide summary: a: 0, c: 7, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a t a g a Downstream nucleotide summary: a: 5, c: 0, g: 1, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 5, cc: 0, cg: 1, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr7:121011354-121011477 (-) ctacaaagcctcccagatataagtgtgggatctcaaaagcttgccctgagaagcattttgcttttaaaatggcaagtggagcagccaacgtggtgggacccaaaatctgcctggaagataatgt >BF085411:81-204 (-) ctaccaagcctccccgatataagtgtgggatctccaaagcttgccctgagaagccttttgcttttaaaatggccagtggagcagcccacgtggtgggaccccaaatctgcctggaagataatgt End editing Edited EST: BI771597, type: ca Aligns to: chr9:97909731-97910254 (--) All mismatches: ca (142), ca (144), ca (145), ca (149), ca (150), ca (151), Editing mismatches: 6, all mismatches: 6, alignment length: 525, cluster length: 10, total number of Cs: 6 Locations in RNA: 142 144 145 149 150 151 Locations in genome: 97909731 97909733 97909734 97909737 97909739 97909740 Upstream nucleotide (in genome): t c a g c a Upstream nucleotide summary: a: 2, c: 2, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): n t c a g c Downstream nucleotide summary: a: 1, c: 2, g: 1, t: 1, other: 1 Dinucleotide summary: aa: 0, ac: 2, ag: 0, at: 0, ca: 0, cc: 0, cg: 1, ct: 1, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr9:97909731-97910254 (-) atagttattcagtactttaagtatttccctaccacttgggtgtgtggccaactttcatataaaagagcttctgtgcttaagttggtgctgataccagacaagtacaagcaatacagtaagtccagagattctattgtaaggcagaagtacagttctcttggtgacatattaatttatcacatctgcatttaaattttttttcttcagactctgaatgattggtctcaaactgatgtggcagttaacttgcaccataacagtattcaaaatattgttgcataagacacaataaggtaaatcattaacatctgtaaaggcaagggaaaaataactttcctcacattttttgtctttatttacagtttagcccactttctctgtagcagatgtctccatctcatgagtcagagaattctctgatgtgtcagtttcatcttttcttttcttttctttttt-gagacagagtttcactcttgttgcccaggctggagtacagtggtgcaatctcggctcaccgca-acctc >BI771597:142-666 (-) atagttattcagtactttaagtatttccctaccacttgggtgtgtggccaactttcatataaaagagcttctgtgcttaagttggtgctgataccagacaagtacaagcaatacagtaagtccagagattctattgtaaggcagaagtacagttctcttggtgacatattaatttatcacatctgcatttaaattttttttcttcagactctgaatgattggtctcaaactgatgtggcagttaacttgcaccataacagtattcaaaatattgttgcataagacacaataaggtaaatcattaacatctgtaaaggcaagggaaaaataactttcctcacattttttgtctttatttacagtttagcccactttctctgtagcagatgtctccatctcatgagtcagagaattctctgatgtgtcagtttcatcttttcttttcttttctttttttgagacagagtttcactcttgttgcccaggctggagtacagtggtgcaatctcggctcaaa-aataaata End editing Edited EST: BG010119, type: ac Aligns to: chr9:113265318-113265499 (--) All mismatches: ac (100), ac (113), ac (117), ac (144), ac (158), ac (188), ac (209), ac (231), ac (240), Editing mismatches: 9, all mismatches: 9, alignment length: 183, cluster length: 140, total number of As: 45 Locations in RNA: 100 113 117 144 158 188 209 231 240 Locations in genome: 113265334 113265347 113265351 113265378 113265392 113265421 113265442 113265464 113265473 Upstream nucleotide (in genome): c c c c t c c c c Upstream nucleotide summary: a: 0, c: 8, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): g g g g c a a t g Downstream nucleotide summary: a: 2, c: 1, g: 5, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 2, cc: 0, cg: 5, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr9:113265318-113265499 (-) agtaagaacatgtcctcatctccgccagccgaaacatggccacatcagctgttctacaagggaaatgttatataagacaacatgtttggttgcctgtgatgaagggt-acagactagaaggcagtgataagcttacttgtcaaggaaacagccagtgggatgggccagaaccccggtgtgtgg >BG010119:84-266 (-) agtaagaacatgtcctcatctccgcccgccgaaacctggccacatcagctgttctaccagggaaatgttatataagaccacatgtttggttgcctgtgatgaagggtaccagactagaaggccgtgataagcttacttgtcaaggaaaccgcccgtgggatgggcccgaaccccggtgtgtgg End editing Edited EST: BC029914, type: ac Aligns to: chr9:46066704-46068416 (--) All mismatches: ac (232), ac (233), ac (235), ac (237), ac (239), Editing mismatches: 5, all mismatches: 5, alignment length: 1710, cluster length: 10, total number of As: 7 Locations in RNA: 232 233 235 237 239 Locations in genome: 46066704 46066705 46066707 46066710 46066713 Upstream nucleotide (in genome): a a g g t Upstream nucleotide summary: a: 2, c: 0, g: 2, t: 1, other: 0 Downstream nucleotide (in genome): n a a a g Downstream nucleotide summary: a: 3, c: 0, g: 1, t: 0, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 2, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 1 >chr9:46066704-46068416 (-) tttacaaaagaaggaggtttaatcaacttacagttccacgtggctgggaaggcctcacaatcatggtgaaaggtaagtaggagcaagtcacatcttacatggatggcagcaggctaagagagagcttgtgtcaggaaactcctgtttttaaaatcattagatctcatgagacccatccactatgacgagaacagcatgggaaatacccatctccattattcagtcatttcccaccaggtacctcccacaaaacatgggaattgtgggatctacaggatgagatttgaatggggacacagagccaaaccatatcaggcagcaagggtggtaccactgtatgtaatggcagaggggctgtgggttgtcactgggaattctatcccagagaaatgcacaggtgccactgtctgaagtgttcaagtgggagcagggtagctgtgctggggccgaggtcgggaggccctacccagtgagaagtagcaggagcaaagacagacatggaaaaaagtctgacaacacctccataaggcagatgtgctgagctgaagacctgctataatccttaagcctctttgctatctcttgatctgagggcattatgggcaggggctatagcaggcaaaaacggcaggcctgtcttatacctatgagagctctgtcccagggaaatgcaatgctgcttctggcccaagttgtcaggctgaggtaggtggctgtgctggaggctcaagccaggaggccctgaccagtgaggagtagaaggggccatgaccaacattaaaaactatatgactgcttttccagaaggcagcttgccctgtgctggaggcccacaacagtcataacactcttcactccctcctgaccttgaaggcagttgggtagtggctggagctgcaatagcagcaaaaacagcagatatgtctattgcatctgggagcttcatcccagagaaatgcagagctgctgccagttgaagaggtcaaatgggtgtttcatggctgttctggagttccaggtcagtgtgccttgcctggagaggttaaccagaggcaaggcatgaagtccctctgctcctcagaaccatgaatgtagccactaacttttggcatgcagagaacttggcgttcttgttggtgaagctatggcaactagcactggggtgcttaggggtctaagacccctgggacttctcatgtgcctgatctggagctctgcccagattctatgcagctctccttgttagtctgaaggccccagggggagggactcagggtggatcacctgtgcctatgattacaaaggtccgtgacagaagtatggggccatggggctctctctcagtcactatttctttgtggtaaggatcctcccctgactccacccaatcctgggtgggtggctgttgtgtcttgctgtttttgttctccatggcttctgttgcttccttgctgaatcccaacatgtcctcttggaagatccagttgaagtgctagtgtttactggccagtctatttccttttcacgagagtggagcatactagctgcttctagtaagtcatcttggcacttgatcacaaaagacatttgtttttcacagttctgcaggctggcaagtccaagttaaaggtgccagcagattcaattcttggtaagagttcttcctggcttgcagacagctgccttctcattgtattttcactaggaagaaaa >BC029914:232-1941 (-) tttacaaaagaaggaggtttaatcaacttacagttccacgtggctgggaaggcctcacaatcatggtgaaaggtaagtaggagcaagtcacatcttacatggatggcagcaggctaagagagagcttgtgtcaggaaactcctgtttttaaaatcattagatctcatgagacccatccactatgacgagaacagcatgggaaatacccatctccattattcagtcatttcccaccaggtacctcccacaaaacatgggaattgtgggatctacaggatgagatttgaatggggacacagagccaaaccatatcaggcagcaagggtggtaccactgtatgtaatggcagaggggctgtgggttgtcactgggaattctatcccagagaaatgcacaggtgccactgtctgaagtgttcaagtgggagcagggtagctgtgctggggccgaggtcgggaggccctacccagtgagaagtagcaggagcaaagacagacatggaaaaaagtctgacaacacctccataaggcagatgtgctgagctgaagacctgctataatccttaagcctctttgctatctcttgatctgagggcattatgggcaggggctatagcaggcaaaaacggcaggcctgtcttatacctatgagagctctgtcccagggaaatgcaatgctgcttctggcccaagttgtcaggctgaggtaggtggctgtgctggaggctcaagccaggaggccctgaccagtgaggagtagaaggggccatgaccaacattaaaaactatatgactgcttttccagaaggcagcttgccctgtgctggaggcccacaacagtcataacactcttcactccctcctgaccttgaaggcagttgggtagtggctggagctgcaatagcagcaaaaacagcagatatgtctattgcatctgggagcttcatcccagagaaatgcagagctgctgccagttgaagaggtcaaatgggtgtttcatggctgttctggagttccaggtcagtgtgccttgcctggagaggttaaccagaggcaaggcatgaagtccctctgctcctcagaaccatgaatgtagccactaacttttggcatgcagagaacttggcgttcttgttggtgaagctatggcaactagcactggggtgcttaggggtctaagacccctgggacttctcatgtgcctgatctggagctctgcccagattctatgcagctctccttgttagtctgaaggccccagggggagggactcagggtggatcacctgtgcctatgattacaaaggtccgtgacagaagtatggggccatggggctctctctcagtcactatttctttgtggtaaggatcctcccctgactccacccaatcctgggtgggtggctgttgtgtcttgctgtttttgttctccatggcttctgttgcttccttgctgaatcccaacatgtcctcttggaagatccagttgaagtgctagtgtttactggccagtctatttccttttcacgagagtggagcatactagctgcttctagtaagtcatcttggcacttgatcacaaaagacatttgtttttcacagttctgcaggctggcaagtccaagttaaaggtgccagcagattcaattcttggtaagagttcttcctggcttgcagacagctgccttctcattgtattttcac-cg-ca-cacc End editing Edited EST: BU963224, type: gc Aligns to: chr1:156109576-156109786 (++) All mismatches: gc (200), gc (204), gc (205), gc (209), gc (211), gc (212), Editing mismatches: 6, all mismatches: 6, alignment length: 212, cluster length: 12, total number of Gs: 7 Locations in RNA: 200 204 205 209 211 212 Locations in genome: 156109773 156109777 156109778 156109781 156109783 156109784 Upstream nucleotide (in genome): g t g a t g Upstream nucleotide summary: a: 1, c: 0, g: 3, t: 2, other: 0 Downstream nucleotide (in genome): t g c t g t Downstream nucleotide summary: a: 0, c: 1, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 1, gg: 0, gt: 2, ta: 0, tc: 0, tg: 2, tt: 0, other: 0 >chr1:156109576-156109786 (+) gaggtgggaggtggaagaagggagaagaaaggtgagtttgagctgccttccctagctttagaccctgggtgggctctgtgcagtcactggaggttgaagccaagtggggtgctgggaggagggagagggaggtcactggaaaggggagagcctgctggcacccaccgtggaggaggaaggcaagagggggtggaggggtgtggca-gtggtt >BU963224:3-214 (+) gaggtgggaggtggaagaagggagaagaaaggtgagtttgagctgccttccctagctttagaccctgggtgggctctgtgcagtcactggaggttgaagccaagtggggtgctgggaggagggagagggaggtcactggaaaggggagagcctgctggcacccaccgtggaggaggaaggcaagagggggtggagggctgtcccatctcctt End editing Edited EST: BM807469, type: gc Aligns to: chr20:33759778-33760036 (++) All mismatches: gc (247), gc (252), gc (253), gc (256), gc (257), Editing mismatches: 5, all mismatches: 5, alignment length: 257, cluster length: 13, total number of Gs: 7 Locations in RNA: 247 252 253 256 257 Locations in genome: 33760024 33760030 33760032 33760035 33760036 Upstream nucleotide (in genome): a t a c g Upstream nucleotide summary: a: 2, c: 1, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): a a t g n Downstream nucleotide summary: a: 2, c: 0, g: 1, t: 1, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 1 >chr20:33759778-33760036 (+) cagtagaaataacactttataagcctcttcctcctcccatctcctggcctccttccatcctcctctgcccagactccgcccctcccagacggtcctcacttctcttttccctagactgcagccagcggagcccgcagccggcccgagccaggaacccaggtccggagcctcaacttcaggatgttgacaacattgctgccgatactgctgctgtctggctgggccttttgtagccaagacgcctcagatggtgagtcgg >BM807469:1-257 (+) cagtagaaataacactttataagcctcttcctcctcccatctcctggcctccttccatcctcctctgcccagactccgcccctcccagacggtcctcacttctcttttccctagactgcagccagcggagcccgcagccggcccgagccaggaacccaggtccggagcctcaacttcaggatgttgacaacattgctgccgatactgctgctgtctggctgggccttttgtagccaagacgcctcacatgg-c-ctccc End editing Edited EST: BI050373, type: gc Aligns to: chr22:24220824-24221198 (++) All mismatches: cg (43), cg (46), cg (47), cg (48), cg (49), cg (52), Editing mismatches: 6, all mismatches: 6, alignment length: 375, cluster length: 11, total number of Cs: 7 Locations in RNA: 43 46 47 48 49 52 Locations in genome: 24220824 24220827 24220829 24220830 24220831 24220834 Upstream nucleotide (in genome): n t t c c t Upstream nucleotide summary: a: 0, c: 2, g: 0, t: 3, other: 1 Downstream nucleotide (in genome): c t c c a g Downstream nucleotide summary: a: 1, c: 3, g: 1, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 1, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 1, tt: 1, other: 1 >chr22:24220824-24221198 (+) cctctcccatc-gcaagggctgtggatttaaggaggggtgaagaccggggcccattagtgtactcttctctgtcaccatggccgcaattattacttatgtctctcctctgtgcaaaatgtgttcagtcccatcccaggatcccccaaagtctcatccaatcatggcatcgggcttgaagtcccagatcttacgccacattaagtctatatgggccttttcttgatccagaaacctaggatctagaaagatgagtcttcttcccttcccacactcagcatgcaatggtaaaaagtaagatgaggtaaccaaaattaatgctctcatttcaaaaacgaggaagcaaggcaggcacagtgcagtcactaatctataaca >BI050373:43-417 (+) gctg-gggatgagcaagggctgtggatttaaggaggggtgaagaccggggcccattagtgtactcttctctgtcaccatggccgcaattattacttatgtctctcctctgtgcaaaatgtgttcagtcccatcccaggatcccccaaagtctcatccaatcatggcatcgggcttgaagtcccagatcttacgccacattaagtctatatgggccttttcttgatccagaaacctaggatctagaaagatgagtcttcttcccttcccacactcagcatgcaatggtaaaaagtaagatgaggtaaccaaaattaatgctctcatttcaaaaacgaggaagcaaggcaggcacagtgcagtcactaatctataaca End editing Edited EST: BU196704, type: gc Aligns to: chr15:72498904-72499052 (+-) All mismatches: cg (138), cg (140), cg (141), cg (142), cg (143), cg (144), cg (145), Editing mismatches: 7, all mismatches: 7, alignment length: 147, cluster length: 10, total number of Cs: 7 Locations in RNA: 138 140 141 142 143 144 145 Locations in genome: 72498915 72498913 72498912 72498910 72498909 72498907 72498906 Upstream nucleotide (in genome): a c t c a c g Upstream nucleotide summary: a: 2, c: 3, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): t a c t c a c Downstream nucleotide summary: a: 2, c: 3, g: 0, t: 2, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 1, ca: 2, cc: 0, cg: 0, ct: 1, ga: 0, gc: 1, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 0, other: 0 >chr15:72498904-72499052 (+) agccacctccacttccacccccaccctcttgctgctgtaacttggaggataatgaaaggctgtgcataagaggatggagaaacctaaaaagctctgcaccagagcttgcatccatcccaggcccagtccgaagccctgggggatggggc >BU196704:1-147 (-) aggg-gg-ggagttccacccccaccctcttgctgctgtaacttggaggataatgaaaggctgtgcataagaggatggagaaacctaaaaagctctgcaccagagcttgcatccatcccaggcccagtccgaagccctgggggatggggc End editing Edited EST: BQ423001, type: gc Aligns to: chr19:46341704-46341874 (+-) All mismatches: cg (220), cg (221), cg (223), cg (226), cg (229), cg (234), Editing mismatches: 6, all mismatches: 6, alignment length: 173, cluster length: 13, total number of Cs: 9 Locations in RNA: 220 221 223 226 229 234 Locations in genome: 46341716 46341714 46341713 46341710 46341708 46341704 Upstream nucleotide (in genome): t c t c a n Upstream nucleotide summary: a: 1, c: 2, g: 0, t: 2, other: 1 Downstream nucleotide (in genome): a t c a c c Downstream nucleotide summary: a: 2, c: 3, g: 0, t: 1, other: 0 Dinucleotide summary: aa: 0, ac: 1, ag: 0, at: 0, ca: 1, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 0, other: 1 >chr19:46341704-46341874 (+) ccca-cc-catc-ctcaccagattagccacattatcaggcgtcagcagaggctgcaggaactcagctgtgatgtccgtgtctgactggccggagatctgcgctgaggccttcgaggtccccgacgggcctggctccaagtctttgtcctcatcgtcctcccccaggttgggctc >BQ423001:62-234 (-) gccatgctgatgag-gaccagattagccacattatcaggcgtcagcagaggctgcaggaactcagctgtgatgtccgtgtctgactggccggagatctgcgctgaggccttcgaggtccccgacgggcctggctccaagtctttgtcctcatcgtcctcccccaggttgggctc End editing Edited EST: BM465939, type: at Aligns to: chr11:75111725-75111868 (++) All mismatches: ta (57), ta (58), ta (60), ta (61), ta (63), ta (66), Editing mismatches: 6, all mismatches: 6, alignment length: 143, cluster length: 11, total number of Ts: 7 Locations in RNA: 57 58 60 61 63 66 Locations in genome: 75111725 75111726 75111728 75111729 75111730 75111735 Upstream nucleotide (in genome): n t g t t t Upstream nucleotide summary: a: 0, c: 0, g: 1, t: 4, other: 1 Downstream nucleotide (in genome): t g t t g a Downstream nucleotide summary: a: 1, c: 0, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 0, tg: 2, tt: 1, other: 1 >chr11:75111725-75111868 (+) ttgtt-tggattagtttgtcgctgatggcatcttcaaagctgaactgaatgagtttcttactcgggagctggctgaagatggctactctggagttgaggtgcgagttacaccaaccaggacagaaatcattatcttagccaccag >BM465939:57-199 (+) aagaagagg--aagtttgtcgctgatggcatcttcaaagctgaactgaatgagtttcttactcgggagctggctgaagatggctactctggagttgaggtgcgagttacaccaaccaggacagaaatcattatcttagccaccag End editing Edited EST: BM809497, type: at Aligns to: chr11:75111725-75111868 (++) All mismatches: ta (57), ta (58), ta (60), ta (61), ta (63), ta (66), Editing mismatches: 6, all mismatches: 6, alignment length: 143, cluster length: 11, total number of Ts: 7 Locations in RNA: 57 58 60 61 63 66 Locations in genome: 75111725 75111726 75111728 75111729 75111730 75111735 Upstream nucleotide (in genome): n t g t t t Upstream nucleotide summary: a: 0, c: 0, g: 1, t: 4, other: 1 Downstream nucleotide (in genome): t g t t g a Downstream nucleotide summary: a: 1, c: 0, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 0, tg: 2, tt: 1, other: 1 >chr11:75111725-75111868 (+) ttgtt-tggattagtttgtcgctgatggcatcttcaaagctgaactgaatgagtttcttactcgggagctggctgaagatggctactctggagttgaggtgcgagttacaccaaccaggacagaaatcattatcttagccaccag >BM809497:57-199 (+) aagaagagg--aagtttgtcgctgatggcatcttcaaagctgaactgaatgagtttcttactcgggagctggctgaagatggctactctggagttgaggtgcgagttacaccaaccaggacagaaatcattatcttagccaccag End editing Edited EST: BM904455, type: at Aligns to: chr11:75111725-75111868 (++) All mismatches: ta (48), ta (49), ta (51), ta (52), ta (54), ta (57), Editing mismatches: 6, all mismatches: 6, alignment length: 143, cluster length: 11, total number of Ts: 7 Locations in RNA: 48 49 51 52 54 57 Locations in genome: 75111725 75111726 75111728 75111729 75111730 75111735 Upstream nucleotide (in genome): n t g t t t Upstream nucleotide summary: a: 0, c: 0, g: 1, t: 4, other: 1 Downstream nucleotide (in genome): t g t t g a Downstream nucleotide summary: a: 1, c: 0, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 0, tg: 2, tt: 1, other: 1 >chr11:75111725-75111868 (+) ttgtt-tggattagtttgtcgctgatggcatcttcaaagctgaactgaatgagtttcttactcgggagctggctgaagatggctactctggagttgaggtgcgagttacaccaaccaggacagaaatcattatcttagccaccag >BM904455:48-190 (+) aagaagagg--aagtttgtcgctgatggcatcttcaaagctgaactgaatgagtttcttactcgggagctggctgaagatggctactctggagttgaggtgcgagttacaccaaccaggacagaaatcattatcttagccaccag End editing Edited EST: BG336157, type: at Aligns to: chr11:75111725-75111868 (++) All mismatches: ta (38), ta (39), ta (41), ta (42), ta (44), ta (47), Editing mismatches: 6, all mismatches: 6, alignment length: 142, cluster length: 11, total number of Ts: 7 Locations in RNA: 38 39 41 42 44 47 Locations in genome: 75111725 75111726 75111728 75111729 75111730 75111735 Upstream nucleotide (in genome): n t g t t t Upstream nucleotide summary: a: 0, c: 0, g: 1, t: 4, other: 1 Downstream nucleotide (in genome): t g t t g a Downstream nucleotide summary: a: 1, c: 0, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 0, tg: 2, tt: 1, other: 1 >chr11:75111725-75111868 (+) ttgtt-tggattagtttgtcgctgatggcatcttcaaagctgaactgaatgagtttcttactcgggagctggctgaagatggctactctggagttgaggtgcgagttacaccaaccaggacagaaatcattatcttagccaccag >BG336157:38-179 (+) aagaagagg--aag-ttgtcgctgatggcatcttcaaagctgaactgaatgagtttcttactcgggagctggctgaagatggctactctggagttgaggtgcgagttacaccaaccaggacagaaatcattatcttagccaccag End editing Edited EST: BF795317, type: at Aligns to: chr11:75111725-75111868 (++) All mismatches: ta (37), ta (38), ta (40), ta (41), ta (43), ta (46), Editing mismatches: 6, all mismatches: 6, alignment length: 145, cluster length: 11, total number of Ts: 7 Locations in RNA: 37 38 40 41 43 46 Locations in genome: 75111725 75111726 75111728 75111729 75111730 75111735 Upstream nucleotide (in genome): n t g t t t Upstream nucleotide summary: a: 0, c: 0, g: 1, t: 4, other: 1 Downstream nucleotide (in genome): t g t t g a Downstream nucleotide summary: a: 1, c: 0, g: 2, t: 3, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 1, tc: 0, tg: 2, tt: 1, other: 1 >chr11:75111725-75111868 (+) ttgtt-tggattagtttgtcgctgatggcatcttcaaag-ctgaactgaatgagtttcttactcgggagctggctgaagatggctactctggagttgaggtgcgagttacaccaaccaggacag-aaatcattatcttagccaccag >BF795317:37-181 (+) aagaagagg--aagtttgtcgctgatggcatcttcaaagtctgaactgaatgagtttcttactcgggagctggctgaagatggctactctggagttgaggtgcgagttacaccaaccaggacagcaaatcattatcttagccaccag End editing Edited EST: AI364778, type: at Aligns to: chr12:129474639-129474813 (++) All mismatches: at (1), at (5), at (9), at (13), at (19), Editing mismatches: 5, all mismatches: 5, alignment length: 175, cluster length: 19, total number of As: 5 Locations in RNA: 1 5 9 13 19 Locations in genome: 129474639 129474643 129474647 129474651 129474657 Upstream nucleotide (in genome): n t t t t Upstream nucleotide summary: a: 0, c: 0, g: 0, t: 4, other: 1 Downstream nucleotide (in genome): t t t t t Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 4, other: 1 >chr12:129474639-129474813 (+) atttatttatttatttttattttttatacagagtctcactctgtcacccaggctggagttcaatggcatgatctcagctcactgcaacctccacctcctgagtttaagtgattctcctgcctcagcctcccaagtagctgcgactacaggtgggcaccaccatgctcagctaatt >AI364778:1-175 (+) tttttttttttttttttttttttttatacagagtctcactctgtcacccaggctggagttcaatggcatgatctcagctcactgcaacctccacctcctgagtttaagtgattctcctgcctcagcctcccaagtagctgcgactacaggtgggcaccaccatgctcagctaatt End editing Edited EST: AV646316, type: at Aligns to: chr12:110641127-110641390 (++) All mismatches: ta (122), ta (123), ta (124), ta (126), ta (127), ta (131), ta (132), ta (135), ta (136), Editing mismatches: 9, all mismatches: 9, alignment length: 266, cluster length: 13, total number of Ts: 9 Locations in RNA: 122 123 124 126 127 131 132 135 136 Locations in genome: 110641127 110641128 110641129 110641131 110641132 110641135 110641136 110641138 110641139 Upstream nucleotide (in genome): n t t c t a t a t Upstream nucleotide summary: a: 2, c: 1, g: 0, t: 5, other: 1 Downstream nucleotide (in genome): t t c t a t a t c Downstream nucleotide summary: a: 2, c: 2, g: 0, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 2, tg: 0, tt: 1, other: 1 >chr12:110641127-110641390 (+) tttctta-att-attcttgttctctgtagctttcaatcctttatacatagtgttccttttttttaaatactgtcttccccttgttcatcttccacctaactgttcttactaatccttcgtgattagcttagatatcaatttctccaggaaattgtccccactgatccccaagcctgggttaggttcccgggagtcctgtgtgccttctgtaacaccttgtgttttcctatcatagctctcagcagcctgtttacttgtctgaacat >AV646316:122-387 (+) aaacaaacaaacaaacttgttctctgtagctttcaatcctttatacatagtgttccttttttttaaatactgtcttccccttgttcatcttccacctaactgttcttactaatccttcgtgattagcttagatatcaatttctccaggaaattgtccccactgatccccaagcctgggttaggttcccgggagtcctgtgtgccttctgtaacaccttgtgttttcctatcatagctctcagcagcctgtttacttgtctgaacat End editing Edited EST: AV646320, type: at Aligns to: chr12:110641127-110641384 (++) All mismatches: ta (122), ta (123), ta (124), ta (126), ta (127), ta (131), ta (132), ta (135), ta (136), Editing mismatches: 9, all mismatches: 9, alignment length: 260, cluster length: 13, total number of Ts: 9 Locations in RNA: 122 123 124 126 127 131 132 135 136 Locations in genome: 110641127 110641128 110641129 110641131 110641132 110641135 110641136 110641138 110641139 Upstream nucleotide (in genome): n t t c t a t a t Upstream nucleotide summary: a: 2, c: 1, g: 0, t: 5, other: 1 Downstream nucleotide (in genome): t t c t a t a t c Downstream nucleotide summary: a: 2, c: 2, g: 0, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 2, tg: 0, tt: 1, other: 1 >chr12:110641127-110641384 (+) tttctta-att-attcttgttctctgtagctttcaatcctttatacatagtgttccttttttttaaatactgtcttccccttgttcatcttccacctaactgttcttactaatccttcgtgattagcttagatatcaatttctccaggaaattgtccccactgatccccaagcctgggttaggttcccgggagtcctgtgtgccttctgtaacaccttgtgttttcctatcatagctctcagcagcctgtttacttgtct >AV646320:122-381 (+) aaacaaacaaacaaacttgttctctgtagctttcaatcctttatacatagtgttccttttttttaaatactgtcttccccttgttcatcttccacctaactgttcttactaatccttcgtgattagcttagatatcaatttctccaggaaattgtccccactgatccccaagcctgggttaggttcccgggagtcctgtgtgccttctgtaacaccttgtgttttcctatcatagctctcagcagcctgtttacttgtct End editing Edited EST: AV651560, type: at Aligns to: chr12:110641127-110641375 (++) All mismatches: ta (122), ta (123), ta (124), ta (126), ta (127), ta (131), ta (132), ta (135), ta (136), Editing mismatches: 9, all mismatches: 9, alignment length: 251, cluster length: 13, total number of Ts: 9 Locations in RNA: 122 123 124 126 127 131 132 135 136 Locations in genome: 110641127 110641128 110641129 110641131 110641132 110641135 110641136 110641138 110641139 Upstream nucleotide (in genome): n t t c t a t a t Upstream nucleotide summary: a: 2, c: 1, g: 0, t: 5, other: 1 Downstream nucleotide (in genome): t t c t a t a t c Downstream nucleotide summary: a: 2, c: 2, g: 0, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 2, tg: 0, tt: 1, other: 1 >chr12:110641127-110641375 (+) tttctta-att-attcttgttctctgtagctttcaatcctttatacatagtgttccttttttttaaatactgtcttccccttgttcatcttccacctaactgttcttactaatccttcgtgattagcttagatatcaatttctccaggaaattgtccccactgatccccaagcctgggttaggttcccgggagtcctgtgtgccttctgtaacaccttgtgttttcctatcatagctctcagcagcctgtt >AV651560:122-372 (+) aaacaaacaaacaaacttgttctctgtagctttcaatcctttatacatagtgttccttttttttaaatactgtcttccccttgttcatcttccacctaactgttcttactaatccttcgtgattagcttagatatcaatttctccaggaaattgtccccactgatccccaagcctgggttaggttcccgggagtcctgtgtgccttctgtaacaccttgtgttttcctatcatagctctcagcagcctgtt End editing Edited EST: AV651994, type: at Aligns to: chr12:110641127-110641385 (++) All mismatches: ta (122), ta (123), ta (124), ta (126), ta (127), ta (131), ta (132), ta (135), ta (136), Editing mismatches: 9, all mismatches: 9, alignment length: 261, cluster length: 13, total number of Ts: 9 Locations in RNA: 122 123 124 126 127 131 132 135 136 Locations in genome: 110641127 110641128 110641129 110641131 110641132 110641135 110641136 110641138 110641139 Upstream nucleotide (in genome): n t t c t a t a t Upstream nucleotide summary: a: 2, c: 1, g: 0, t: 5, other: 1 Downstream nucleotide (in genome): t t c t a t a t c Downstream nucleotide summary: a: 2, c: 2, g: 0, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 2, tg: 0, tt: 1, other: 1 >chr12:110641127-110641385 (+) tttctta-att-attcttgttctctgtagctttcaatcctttatacatagtgttccttttttttaaatactgtcttccccttgttcatcttccacctaactgttcttactaatccttcgtgattagcttagatatcaatttctccaggaaattgtccccactgatccccaagcctgggttaggttcccgggagtcctgtgtgccttctgtaacaccttgtgttttcctatcatagctctcagcagcctgtttacttgtctg >AV651994:122-382 (+) aaacaaacaaacaaacttgttctctgtagctttcaatcctttatacatagtgttccttttttttaaatactgtcttccccttgttcatcttccacctaactgttcttactaatccttcgtgattagcttagatatcaatttctccaggaaattgtccccactgatccccaagcctgggttaggttcccgggagtcctgtgtgccttctgtaacaccttgtgttttcctatcatagctctcagcagcctgtttacttgtctg End editing Edited EST: DW423502, type: at Aligns to: chr13:61034907-61035164 (++) All mismatches: ta (242), ta (249), ta (251), ta (253), ta (255), ta (257), ta (259), ta (264), ta (270), Editing mismatches: 9, all mismatches: 9, alignment length: 258, cluster length: 29, total number of Ts: 9 Locations in RNA: 242 249 251 253 255 257 259 264 270 Locations in genome: 61035133 61035140 61035142 61035144 61035146 61035148 61035150 61035155 61035161 Upstream nucleotide (in genome): c a a a a a a a a Upstream nucleotide summary: a: 8, c: 1, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): c a a a a a a a a Downstream nucleotide summary: a: 8, c: 1, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 8, ac: 0, ag: 0, at: 0, ca: 0, cc: 1, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr13:61034907-61035164 (+) gggggacggatcacccaaggtcaggagttcaagaccagcctgaccaatgtggtgaaaccctgtctctacaaaatacaagaattagccaggcatgatggcgggtgccggtaatcccagctacttgggaggctgaggtgggagaatagcttgaacctggtaggcggaggttgcagtgagctgagatcatgccattgcacttcagcctgggtgacagtgggactgtgtctcaaaaatatatatatataaaataaaaataaa >DW423502:16-273 (+) gggggacggatcacccaaggtcaggagttcaagaccagcctgaccaatgtggtgaaaccctgtctctacaaaatacaagaattagccaggcatgatggcgggtgccggtaatcccagctacttgggaggctgaggtgggagaatagcttgaacctggtaggcggaggttgcagtgagctgagatcatgccattgcacttcagcctgggtgacagtgggactgtgtcacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: CD239936, type: at Aligns to: chr14:93401470-93401644 (++) All mismatches: ta (170), ta (171), ta (172), ta (173), ta (174), ta (175), Editing mismatches: 6, all mismatches: 6, alignment length: 175, cluster length: 6, total number of Ts: 6 Locations in RNA: 170 171 172 173 174 175 Locations in genome: 93401639 93401640 93401641 93401642 93401643 93401644 Upstream nucleotide (in genome): a t t t t t Upstream nucleotide summary: a: 1, c: 0, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): t t t t t n Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 5, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 4, other: 1 >chr14:93401470-93401644 (+) ctgaacacaggcagctttctagaagtttcccttcctccatcctatccactgggcacaactgcaataacttctgaccttttggtgaaagctgagaactcctgactgtaacatattctgtatgaactttatctaaagaaaaataaatctgttctgggctctttcctctgaatttttt >CD239936:1-175 (+) ctgaacacaggcagctttctagaagtttcccttcctccatcctatccactgggcacaactgcaataacttctgaccttttggtgaaagctgagaactcctgactgtaacatattctgtatgaactttatctaaagaaaaataaatctgttctgggctctttcctctgaaaaaaaa End editing Edited EST: CD051135, type: at Aligns to: chr15:44063479-44063750 (++) All mismatches: ta (300), ta (301), ta (303), ta (304), ta (305), ta (306), Editing mismatches: 6, all mismatches: 6, alignment length: 274, cluster length: 7, total number of Ts: 6 Locations in RNA: 300 301 303 304 305 306 Locations in genome: 44063744 44063745 44063747 44063748 44063749 44063750 Upstream nucleotide (in genome): c t a t t t Upstream nucleotide summary: a: 1, c: 1, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t a t t t n Downstream nucleotide summary: a: 1, c: 0, g: 0, t: 4, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 2, other: 1 >chr15:44063479-44063750 (+) gaggactaggacccatatgggaattattacctctcagggccgagaggacagaatggatataatctgaatcctgttaaattttctctaaactgtttcttagctgcactgtttatggaaataccaggaccagtttatgtttgtggttttgggaaaaattatttgtgttgggggaaatgttgtgggggtggggttgagttgggggtattttctaattttttttgtacatttggaacagtgacaataaatgagacccctttaaactgt--cttatttt >CD051135:33-306 (+) gaggactaggacccatatgggaattattacctctcagggccgagaggacagaatggatataatctgaatcctgttaaattttctctaaactgtttcttagctgcactgtttatggaaataccaggaccagtttatgtttgtggttttgggaaaaattatttgtgttgggggaaatgttgtgggggtggggttgagttgggggtattttctaattttttttgtacatttggaacagtgacaataaatgagacccctttaaactgtnncaaaaaaa End editing Edited EST: AW963879, type: at Aligns to: chr17:19091371-19091549 (++) All mismatches: ta (175), ta (176), ta (177), ta (178), ta (179), Editing mismatches: 5, all mismatches: 5, alignment length: 179, cluster length: 5, total number of Ts: 5 Locations in RNA: 175 176 177 178 179 Locations in genome: 19091545 19091546 19091547 19091548 19091549 Upstream nucleotide (in genome): g t t t t Upstream nucleotide summary: a: 0, c: 0, g: 1, t: 4, other: 0 Downstream nucleotide (in genome): t t t t n Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 4, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 0, tg: 0, tt: 3, other: 1 >chr17:19091371-19091549 (+) agaagtttctctgaacgtgtagagcaccgaaaaccacgaggaagagaggtagcgttttctcctgagcgtgaagccggctttctggcgttgcttggctgcaactgccgtcagccattgatgatcgttcttctctccgtattggggagtgagagggagagaacgcggtctgagtggttttt >AW963879:1-179 (+) agaagtttctctgaacgtgtagagcaccgaaaaccacgaggaagagaggtagcgttttctcctgagcgtgaagccggctttctggcgttgcttggctgcaactgccgtcagccattgatgatcgttcttctctccgtattggggagtgagagggagagaacgcggtctgagtggaaaaa End editing Edited EST: AW977984, type: at Aligns to: chr17:43576596-43576707 (++) All mismatches: at (72), at (75), at (76), at (79), at (80), Editing mismatches: 5, all mismatches: 5, alignment length: 112, cluster length: 9, total number of As: 7 Locations in RNA: 72 75 76 79 80 Locations in genome: 43576596 43576599 43576600 43576603 43576604 Upstream nucleotide (in genome): n t a t a Upstream nucleotide summary: a: 2, c: 0, g: 0, t: 2, other: 1 Downstream nucleotide (in genome): a a a a a Downstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 0, tt: 0, other: 1 >chr17:43576596-43576707 (+) aataaataaattttttgtagaaaaggggcttcactatgttgcccagggtgttcttgaactattggcctcaagctatcctcccacttggcctcccaaagtgctaggattacag >AW977984:72-183 (+) tatttatttattttttgtagaaaaggggcttcactatgttgcccagggtgttcttgaactattggcctcaagctatcctcccacttggcctcccaaagtgctaggattacag End editing Edited EST: BU590319, type: at Aligns to: chr1:154248161-154248357 (++) All mismatches: ta (194), ta (195), ta (196), ta (197), ta (198), ta (199), Editing mismatches: 6, all mismatches: 6, alignment length: 197, cluster length: 6, total number of Ts: 6 Locations in RNA: 194 195 196 197 198 199 Locations in genome: 154248352 154248353 154248354 154248355 154248356 154248357 Upstream nucleotide (in genome): a t t t t t Upstream nucleotide summary: a: 1, c: 0, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): t t t t t n Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 5, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 4, other: 1 >chr1:154248161-154248357 (+) ggttccggtcccggtagccttgttaaccctcagaggccttcaagtcctttccacctctcacccattgcccaccattaataagcttagcttctcttgccacctcaggggcttggatatgtggaatagtgaactggggccatgtcagtttgtcactcacccaaactgaccaataaaacctttatttatgctaatttttt >BU590319:3-199 (+) ggttccggtcccggtagccttgttaaccctcagaggccttcaagtcctttccacctctcacccattgcccaccattaataagcttagcttctcttgccacctcaggggcttggatatgtggaatagtgaactggggccatgtcagtttgtcactcacccaaactgaccaataaaacctttatttatgctaaaaaaaa End editing Edited EST: BU940115, type: at Aligns to: chr1:154248238-154248357 (++) All mismatches: ta (119), ta (120), ta (121), ta (122), ta (123), ta (124), Editing mismatches: 6, all mismatches: 6, alignment length: 122, cluster length: 6, total number of Ts: 6 Locations in RNA: 119 120 121 122 123 124 Locations in genome: 154248352 154248353 154248354 154248355 154248356 154248357 Upstream nucleotide (in genome): a t t t t t Upstream nucleotide summary: a: 1, c: 0, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): t t t t t n Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 5, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 4, other: 1 >chr1:154248238-154248357 (+) ataagcttagcttctcttg-ccacctcaggggcttggatatgtggaatagtgaactggggccatgtcagtttgtcactcacccaaactgaccaataaaacctttatttatgcta-atttttt >BU940115:3-124 (+) ataagcttagcttctcttgcccacctcaggggcttggatatgtggaatagtgaactggggccatgtcagtttgtcactcacccaaactgaccaataaaacctttatttatgctanaaaaaaa End editing Edited EST: BU960819, type: at Aligns to: chr1:146767324-146767453 (++) All mismatches: ta (127), ta (128), ta (129), ta (131), ta (132), Editing mismatches: 5, all mismatches: 5, alignment length: 130, cluster length: 6, total number of Ts: 5 Locations in RNA: 127 128 129 131 132 Locations in genome: 146767448 146767449 146767450 146767452 146767453 Upstream nucleotide (in genome): t t t a t Upstream nucleotide summary: a: 1, c: 0, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t t a t n Downstream nucleotide summary: a: 1, c: 0, g: 0, t: 3, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 2, other: 1 >chr1:146767324-146767453 (+) ggttctcctggatgttttgctctgttttggtacctgtaatatagggaaacacaactttttttgggaaagccctttgaccccagcttgctagttgcataataataaattttctgttcctaatggttttatt >BU960819:3-132 (+) ggttctcctggatgttttgctctgttttggtacctgtaatatagggaaacacaactttttttgggaaagccctttgaccccagcttgctagttgcataataataaattttctgttcctaatggtaaaaaa End editing Edited EST: AV728302, type: at Aligns to: chr1:70906784-70907176 (++) All mismatches: at (415), at (416), at (418), at (419), at (420), Editing mismatches: 5, all mismatches: 5, alignment length: 396, cluster length: 6, total number of As: 5 Locations in RNA: 415 416 418 419 420 Locations in genome: 70907171 70907172 70907174 70907175 70907176 Upstream nucleotide (in genome): a a g a a Upstream nucleotide summary: a: 4, c: 0, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): a g a a n Downstream nucleotide summary: a: 3, c: 0, g: 1, t: 0, other: 1 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr1:70906784-70907176 (+) atcttgggcagtgatgaggcaagttggtggatcccagcataattacccccaagacctgggacttttatgccatagggagaggagtggttgaaaaggaatttgtaagacaattatgataacatcaaagctgtttgacctaagggcaggatttactgtatgtatgagtttatcaaggtgtcttactctaagggcaggatttacaataagtacctgctcttaaacaaggttcaaatagataaattggaatgagggttaatcagaagctaacagggcagattagcatccaagatggagttgctttggcctctagatggggcatcctgtgcaatttgctaaggtgcttatttggctttctctggtcctaagttggaagcaggggca-a-aa-ttaaagaaa >AV728302:25-420 (+) atcttgggcagtgatgaggcaagttggtggatcccagcataattacccccaagacctgggacttttatgccatagggagaggagtggttgaaaaggaatttgtaagacaattatgataacatcaaagctgtttgacctaagggcaggatttactgtatgtatgagtttatcaaggtgtcttactctaagggcaggatttacaataagtacctgctcttaaacaaggttcaaatagataaattggaatgagggttaatcagaagctaacagggcagattagcatccaagatggagttgctttggcctctagatggggcatcctgtgcaatttgctaaggtgcttatttggctttctctggtcctaagttggaagcaggggcacacaagttattgttt End editing Edited EST: BI257788, type: at Aligns to: chr20:11907059-11907256 (++) All mismatches: ta (189), ta (190), ta (191), ta (192), ta (193), ta (194), ta (195), ta (197), ta (198), ta (199), Editing mismatches: 10, all mismatches: 10, alignment length: 197, cluster length: 13, total number of Ts: 10 Locations in RNA: 189 190 191 192 193 194 195 197 198 199 Locations in genome: 11907244 11907245 11907246 11907248 11907249 11907250 11907251 11907254 11907255 11907256 Upstream nucleotide (in genome): a t t g t t t c t t Upstream nucleotide summary: a: 1, c: 1, g: 1, t: 7, other: 0 Downstream nucleotide (in genome): t t g t t t c t t n Downstream nucleotide summary: a: 0, c: 1, g: 1, t: 7, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 0, tc: 1, tg: 1, tt: 4, other: 1 >chr20:11907059-11907256 (+) cacttgtgcatcagtgtgcttgaatttagtagcttacagcattatttatgaaggaaaaaatacataaatatgaagtacctcatgttgaatgttattgtactgtatttttaatgtaacagtgcagatcttgttagacacatgaatgtgtataatcatgttaaatgcaaataaaactagttcatag-atttgttttccttt >BI257788:3-199 (+) cacttgtgcatcagtgtgcttgaatttagtagcttacagcattatttatgaaggaaaaaatacataaatatgaagtacctcatgttgaatgttattgtactgtatttttaatgtaacagtgcagatcttgttagacacatgaatgtgtataatcatgttaaatgcaaataaaactagttcatagcaaaa-aaaac-aaa End editing Edited EST: BG928155, type: at Aligns to: chr20:53136752-53137177 (++) All mismatches: ta (490), ta (493), ta (500), ta (501), ta (503), Editing mismatches: 5, all mismatches: 5, alignment length: 427, cluster length: 14, total number of Ts: 5 Locations in RNA: 490 493 500 501 503 Locations in genome: 53137164 53137167 53137174 53137175 53137177 Upstream nucleotide (in genome): a a a t a Upstream nucleotide summary: a: 4, c: 0, g: 0, t: 1, other: 0 Downstream nucleotide (in genome): a a t a n Downstream nucleotide summary: a: 3, c: 0, g: 0, t: 1, other: 1 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 1 >chr20:53136752-53137177 (+) atcaaccttaagtcactcttgagttctctctttttctcacattttattagcaaattctaagccccttatcaaattccattagctctgtgttcaaaacacatctggatatagtgattgatacccctgttgtttccactctaggtcaagatttcatatataatcacctgggctattgcaatcaccttctaacttgtttccttttctacccctgcccatttttgattgaggtgatttttgagactgtaagatcataccactcctctgctcaaaattctgcaagtcttggccaggtaaggtggctcatacccataatcccagcactttgggaggtgaaggcaggaggattttttgagctcaggagtttaagaccactctgggcaacacagcaagatctcatctctactaaaaat-aataataaaaaattat >BG928155:77-503 (+) atcaaccttaagtcactcttgagttctctctttttctcacattttattagcaaattctaagccccttatcaaattccattagctctgtgttcaaaacacatctggatatagtgattgatacccctgttgtttccactctaggtcaagatttcatatataatcacctgggctattgcaatcaccttctaacttgtttccttttctacccctgcccatttttgattgaggtgatttttgagactgtaagatcataccactcctctgctcaaaattctgcaagtcttggccaggtaaggtggctcatacccataatcccagcactttgggaggtgaaggcaggaggattttttgagctcaggagtttaagaccactctgggcaacacagcaagatctcatctctactaaaaatcaaaaaaaaaaaaaaaa End editing Edited EST: AV737411, type: at Aligns to: chr20:32964095-32964285 (++) All mismatches: ta (218), ta (222), ta (226), ta (230), ta (234), Editing mismatches: 5, all mismatches: 5, alignment length: 191, cluster length: 17, total number of Ts: 5 Locations in RNA: 218 222 226 230 234 Locations in genome: 32964267 32964271 32964275 32964279 32964283 Upstream nucleotide (in genome): a a a a a Upstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a Downstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 5, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr20:32964095-32964285 (+) aggcatgatggtggtgtgcgcctattgtcccagctgaagtgcaagggtcgcttaagcccaggaggttgagactgcagtgagctcatgtcgctgcactgatatcatgtcactgatatgtcactgcactctagtctgggcaacagagtgtgaccgtgtctcaaaaataaatacataaataaataaataaataa >AV737411:46-236 (+) aggcatgatggtggtgtgcgcctattgtcccagctgaagtgcaagggtcgcttaagcccaggaggttgagactgcagtgagctcatgtcgctgcactgatatcatgtcactgatatgtcactgcactctagtctgggcaacagagtgtgaccgtgtctcaaaaataaatacaaaaaaaaaaaaaaaaaaaa End editing Edited EST: T91045, type: at Aligns to: chr22:31282042-31282257 (++) All mismatches: at (16), at (17), at (18), at (19), at (53), Editing mismatches: 5, all mismatches: 5, alignment length: 216, cluster length: 37, total number of As: 16 Locations in RNA: 16 17 18 19 53 Locations in genome: 31282042 31282043 31282044 31282045 31282078 Upstream nucleotide (in genome): n a a a g Upstream nucleotide summary: a: 3, c: 0, g: 1, t: 0, other: 1 Downstream nucleotide (in genome): a a a t g Downstream nucleotide summary: a: 3, c: 0, g: 1, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 1, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr22:31282042-31282257 (+) aaaatatttgaagagatttattctcagccaaatatg-agtgaccacagccatgacatagctcttgggaggtcctgagaacatgtgcccaaggtggttggggcgcagcttggttttatatattttagggaggcatgaggcagcaatcaaatacatttaagaaatacattggtttggttcagaaaggcgggacagctcaaaagcaaggtggggaggggg >T91045:16-231 (+) tttttatttgaagagatttattctcagccaaatatgatgtgaccacagccatgacanagctcttgggaggtccngagaacatgtgcccaaggtggttggggcgca-cttggttttatatattttagggaggcatgaggcagcaatcaaatacatttaagaaatacattggtttggttcagaaaggcgggacanctcaaaagcaaggtggggaggggg End editing Edited EST: AV761665, type: at Aligns to: chr22:18111852-18112079 (++) All mismatches: ta (225), ta (226), ta (227), ta (228), ta (229), Editing mismatches: 5, all mismatches: 5, alignment length: 231, cluster length: 5, total number of Ts: 5 Locations in RNA: 225 226 227 228 229 Locations in genome: 18112073 18112074 18112075 18112076 18112077 Upstream nucleotide (in genome): t t t t t Upstream nucleotide summary: a: 0, c: 0, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): t t t t a Downstream nucleotide summary: a: 1, c: 0, g: 0, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 4, other: 0 >chr22:18111852-18112079 (+) ccgggcgtggtggctcacgcctgcaatccggagactttgggagaccaaggcgggtgtatcgcttgacctcaagttcgagaccaggctggacaacatagaggaaccccgtctctaccaaaagaaaaaaaaaagggggatacatgatttctgactattcatgtcaaccttgattacctgaataaagtgtagggtttgtaggtttctccactctgaagttacc-t--tttttaa >AV761665:1-231 (+) ccgggcgtggtggctcacgcctgcaatccggagactttgggagaccaaggcgggtgtatcgcttgacctcaagttcgagaccaggctggacaacatagaggaaccccgtctctaccaaaagaaaaaaaaaagggggatacatgatttctgactattcatgtcaaccttgattacctgaataaagtgtagggtttgtaggtttctccactctgaagttaccctgcaaaaaaa End editing Edited EST: DW422337, type: at Aligns to: chr2:204035734-204036013 (++) All mismatches: ta (270), ta (277), ta (280), ta (281), ta (282), ta (289), ta (293), Editing mismatches: 7, all mismatches: 7, alignment length: 278, cluster length: 26, total number of Ts: 7 Locations in RNA: 270 277 280 281 282 289 293 Locations in genome: 204035987 204035995 204035998 204035999 204036000 204036007 204036012 Upstream nucleotide (in genome): a g a t t a a Upstream nucleotide summary: a: 4, c: 0, g: 1, t: 2, other: 0 Downstream nucleotide (in genome): a a t t a g a Downstream nucleotide summary: a: 4, c: 0, g: 1, t: 2, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 1, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 1, other: 0 >chr2:204035734-204036013 (+) aatcccagcactaaggctggtggatcccctgaggtcaagagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaaattagctgggcatggtggtgggtgcctgtaatcccagcgactcaggaggctgaggaaggagaatcacttgaaccctggagacagaggtcacagtgagctgagatcacaccattgcactccagcctgggcaacaagagtgaaactccatctcaaaaataaaaaagtaatttaaaaaatgaaata >DW422337:17-294 (+) aatcccagcactaaggctggtggatcccctgaggtcaagagttcgagaccagcctggccaacatggtgaaaccccatctctactaaaaatacaaaaaattagctgggcatggtggtgggtgcctgtaatcccagcgactcaggaggctgaggaaggagaatcacttgaaccctggagacagaggtcacagtgagctgagatcacaccattgcactccagcctgggcaacaagagtgaaactccatctcaaaaaaaaaaaa-aaaaaaaaaaaaa-aaaaa End editing Edited EST: BU566892, type: at Aligns to: chr3:142775497-142775700 (++) All mismatches: ta (194), ta (197), ta (198), ta (199), ta (200), ta (201), ta (202), ta (203), ta (204), ta (205), ta (206), Editing mismatches: 11, all mismatches: 11, alignment length: 204, cluster length: 15, total number of Ts: 11 Locations in RNA: 194 197 198 199 200 201 202 203 204 205 206 Locations in genome: 142775686 142775689 142775691 142775692 142775694 142775695 142775696 142775697 142775698 142775699 142775700 Upstream nucleotide (in genome): a a g t g t t t t t t Upstream nucleotide summary: a: 2, c: 0, g: 2, t: 7, other: 0 Downstream nucleotide (in genome): a g t g t t t t t t n Downstream nucleotide summary: a: 1, c: 0, g: 2, t: 7, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 2, ta: 0, tc: 0, tg: 1, tt: 5, other: 1 >chr3:142775497-142775700 (+) tatttctcaagatgaaatttttattgttctaatggatttcatcagaaatgtgtataatggatctgctgacagtagtagtattttgttttaggatgttgtgacttagcaaaaataatacagatgtcttccccccttttgtagctttgacaatttgaattagatttcaaataaaatctgaacagaaaacta--taatgttgttttttt >BU566892:3-206 (+) tatttctcaagatgaaatttttattgttctaatggatttcatcagaaatgtgtataatggatctgctgacagtagtagtattttgttttaggatgttgtgacttagcaaaaataatacagatgtcttccccccttttgtagctttgacaatttgaattagatttcaaataaaatctgaacagaaaactagcaaaa-aa-aaaaaaa End editing Edited EST: BF965229, type: at Aligns to: chr3:38273633-38273768 (++) All mismatches: ta (111), ta (114), ta (116), ta (125), ta (126), ta (127), ta (133), ta (134), ta (137), Editing mismatches: 9, all mismatches: 9, alignment length: 137, cluster length: 26, total number of Ts: 9 Locations in RNA: 111 114 116 125 126 127 133 134 137 Locations in genome: 38273743 38273745 38273747 38273756 38273757 38273758 38273764 38273765 38273768 Upstream nucleotide (in genome): a c a a t t a t a Upstream nucleotide summary: a: 5, c: 1, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): c a a t t a t a n Downstream nucleotide summary: a: 4, c: 1, g: 0, t: 3, other: 1 Dinucleotide summary: aa: 1, ac: 1, ag: 0, at: 2, ca: 1, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 0, tt: 1, other: 1 >chr3:38273633-38273768 (+) gatatggtgactcacgcttgtaatcccagcacctgtgggaggctgaggtgggaggatagcttgatcgcaggagttcaaggctagcctgagcaacatagtgagaccccatat-ctataaaaagaatttaaaaattaat >BF965229:1-137 (+) gatatggtgactcacgcttgtaatcccagcacctgtgggaggctgaggtgggaggatagcttgatcgcaggagttcaaggctagcctgagcaacatagtgagaccccataatcaaaaaaaagaaaaaaaaaaaaaaa End editing Edited EST: H64934, type: at Aligns to: chr4:1922350-1922612 (++) All mismatches: ta (258), ta (259), ta (260), ta (261), ta (262), ta (263), ta (264), Editing mismatches: 7, all mismatches: 7, alignment length: 264, cluster length: 7, total number of Ts: 7 Locations in RNA: 258 259 260 261 262 263 264 Locations in genome: 1922606 1922607 1922608 1922609 1922610 1922611 1922612 Upstream nucleotide (in genome): a t t t t t t Upstream nucleotide summary: a: 1, c: 0, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): t t t t t t n Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 6, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 5, other: 1 >chr4:1922350-1922612 (+) tccttgggagg-ttgaggtgggaggattgcttgagcccaggagtgttgaggttgcagtgagctgtgattgtgccacagctttccagcttaggtgacagagtgagactctgtctcataaaaagaaaagaaaggccgagtgtggcagctcacacctgtcatcccagcactttgggagggtgaggcaggaggattgcttgagcccatgagtttgagaccagcctgggcaacatgaaaccctgtctctaaaaaaaaaaaaattttttt >H64934:1-264 (+) tccttgggaggtttgaggtgggaggattgcttgagcccaggagtgttgaggttgcagtgagctgtgattgtgccacagctttccagcttaggtgacagagtgagactctgtctcataaaaagaaaagaaaggccgagtgtggcagctcacacctgtcatcccagcactttgggagggtgaggcaggaggattgcttgagcccatgagtttgagaccagcctgggcaacatgaaaccctgtctctaaaaaaaaaaaaaaaaaaaa End editing Edited EST: CB306696, type: at Aligns to: chr4:84008405-84008724 (++) All mismatches: at (2), at (3), at (4), at (5), at (6), at (7), at (8), at (10), at (12), at (14), Editing mismatches: 10, all mismatches: 10, alignment length: 318, cluster length: 15, total number of As: 10 Locations in RNA: 2 3 4 5 6 7 8 10 12 14 Locations in genome: 84008406 84008407 84008408 84008409 84008410 84008412 84008413 84008416 84008418 84008420 Upstream nucleotide (in genome): t a a a a g a g t t Upstream nucleotide summary: a: 5, c: 0, g: 2, t: 3, other: 0 Downstream nucleotide (in genome): a a a a g a t t t t Downstream nucleotide summary: a: 5, c: 0, g: 1, t: 4, other: 0 Dinucleotide summary: aa: 3, ac: 0, ag: 1, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 1, ta: 1, tc: 0, tg: 0, tt: 2, other: 0 >chr4:84008405-84008724 (+) taaaaagaatgatatattatgaccaagtgggatttattccaggtatgcaagactgattcaacatttgaaaatcaattaatgtaacccatcatatcaacatactaaagaggaaaaaatcatgattgtattaataggtacagaaaaagcatttgacaaaatccaacactcattcaagataaaaatgctcagtaggccaggtatgcatgtaatcccagcacttttggaggccaaggcaggaggatcacttgagctcgggagtttgagaccagcctgggcaacaaaacaagaccccgtctctaattaaaaaaaaaaaaaaaaaa >CB306696:1-318 (+) tttttt-ttt-tttttttatgaccaagtgggatttattccaggtatgcaagactgattcaacatttgaaaatcaattaatgtaacccatcatatcaacatactaaagaggaaaaaatcatgattgtattaataggtacagaaaaagcatttgacaaaatccaacactcattcaagataaaaatgctcagtaggccaggtatgcatgtaatcccagcacttttggaggccaaggcaggaggatcacttgagctcgggagtttgagaccagcctgggcaacaaaacaagaccccgtctctaattaaaaaaaaaaaaaaaaaa End editing Edited EST: CD237795, type: at Aligns to: chr4:111236498-111236723 (++) All mismatches: ta (222), ta (223), ta (224), ta (225), ta (226), Editing mismatches: 5, all mismatches: 5, alignment length: 226, cluster length: 5, total number of Ts: 5 Locations in RNA: 222 223 224 225 226 Locations in genome: 111236719 111236720 111236721 111236722 111236723 Upstream nucleotide (in genome): a t t t t Upstream nucleotide summary: a: 1, c: 0, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t t t t n Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 4, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 3, other: 1 >chr4:111236498-111236723 (+) catcctgcctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccaggcctggtggcaggtgcctgtagtcccagctagtctggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcgagactctgtctcaaaaaaaaaaaaaaaagaaaaa-attttt >CD237795:1-226 (+) catcctgcctaacacggtgaaaccccgtctctactaaaaatacaaaaaattagccaggcctggtggcaggtgcctgtagtcccagctagtctggaggctgaggcaggagaatcgcttgaacctgggaggcggaggttgcagtgagccgagatcgcgccactgcactccagcctgggtgacagagcgagactctgtctcaaaaaaaaaaaaaaaa-aaaaagaaaaaa End editing Edited EST: AV751092, type: at Aligns to: chr4:68587885-68588253 (++) All mismatches: ta (354), ta (355), ta (356), ta (357), ta (360), ta (361), ta (362), ta (363), ta (364), Editing mismatches: 9, all mismatches: 9, alignment length: 367, cluster length: 14, total number of Ts: 9 Locations in RNA: 354 355 356 357 360 361 362 363 364 Locations in genome: 68588237 68588240 68588242 68588243 68588246 68588247 68588248 68588249 68588250 Upstream nucleotide (in genome): c g g t a t t t t Upstream nucleotide summary: a: 1, c: 1, g: 2, t: 5, other: 0 Downstream nucleotide (in genome): g g t a t t t t a Downstream nucleotide summary: a: 2, c: 0, g: 2, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 1, ct: 0, ga: 0, gc: 0, gg: 1, gt: 1, ta: 2, tc: 0, tg: 0, tt: 3, other: 0 >chr4:68587885-68588253 (+) cttcctgtctcatcctgtgagtaagaatgcctaatctctcaggaatgcagcccagtaggtctcaaccttattttacccagcccccattcaagatggagtgactctggttcaaatgcctctgacacatgtgcctcatgtttgggcatgagacctcactgtgtaggtgcagagaagaccctgcctaaacattgcctacacgttgctcctttttcctgcctcaacttccttaaaatgacaagagcagagcccttttgggagctaacatcaggactccttttctgtactctgctccgttgtgctgctagagccacaagcctattaaactttgcctgaaataaattcctatttgcgctggtgttaattttt-act >AV751092:2-368 (+) cttcctgtctcatcctgtgagtaagaatgcctaatctctcaggaatgcagcccagtaggtctcaaccttattttacccagcccccattcaagatggagtgactctggttcaaatgcctctgacacatgtgcctcatgtttgggcatgagacctcactgtgtaggtgcagagaagaccctgcctaaacattgcctacacgttgctcctttttcctgcctcaacttccttaaaatgacaagagcagagcccttttgggagctaacatcaggactccttttctgtactctgctccgttgtgctgctagagccacaagcctattaaactttgcctgaaataaattcctatttgcgca--a-aaaaaaaaacact End editing Edited EST: BU960958, type: at Aligns to: chr6:32412666-32412828 (++) All mismatches: ta (161), ta (162), ta (163), ta (164), ta (165), Editing mismatches: 5, all mismatches: 5, alignment length: 163, cluster length: 5, total number of Ts: 5 Locations in RNA: 161 162 163 164 165 Locations in genome: 32412824 32412825 32412826 32412827 32412828 Upstream nucleotide (in genome): a t t t t Upstream nucleotide summary: a: 1, c: 0, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t t t t n Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 4, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 3, other: 1 >chr6:32412666-32412828 (+) tattatcaccatgcaatgcctctggaataaaacatacaggagtctgtctctgctatggaatgccccatggggcatctcttgtgtacttattgtttaaggtttcctcaaactgtgatttttctgaacacaataaactattttgatgatcttgggtggaattttt >BU960958:3-165 (+) tattatcaccatgcaatgcctctggaataaaacatacaggagtctgtctctgctatggaatgccccatggggcatctcttgtgtacttattgtttaaggtttcctcaaactgtgatttttctgaacacaataaactattttgatgatcttgggtggaaaaaaa End editing Edited EST: BX389555, type: at Aligns to: chr6:30116259-30116509 (++) All mismatches: ta (248), ta (249), ta (250), ta (251), ta (252), Editing mismatches: 5, all mismatches: 5, alignment length: 252, cluster length: 5, total number of Ts: 5 Locations in RNA: 248 249 250 251 252 Locations in genome: 30116505 30116506 30116507 30116508 30116509 Upstream nucleotide (in genome): t t t t t Upstream nucleotide summary: a: 0, c: 0, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): t t t t n Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 4, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 4, other: 1 >chr6:30116259-30116509 (+) ggagccaag--agcagcttccag-ccaacaacaagcagaggccctcagtcttgtggctgcaagaacctgaattctgccaacaacccgagtgagcttggaagcagattcttccccaactgagccggataagaacctagtccagccaacaccttgattatagtcttgtgagtacctaagctgaggacccagtgaagctgtgccaaaatttcccacccacagaaacagtgtgacaataaatgtgtgtgtgttttttt >BX389555:1-252 (+) ggagccaagtaagcagcttccagncc-acaacaagcagaggccctcagtcttgtggctgcaagaacctgaattctgcc-acaacccgagtgagcttggaagcagattcttccccaactgagccggataagaacctagtccagccaacaccttgattatagtcttgtgagtacctaagctgaggacccagtgaagctgtgccaaaatttcccacccacagaaacagtgtgacaataaatgtgtgtgtgttaaaaa End editing Edited EST: CB857379, type: at Aligns to: chr8:48974914-48975181 (++) All mismatches: ta (257), ta (259), ta (260), ta (263), ta (266), ta (267), Editing mismatches: 6, all mismatches: 6, alignment length: 267, cluster length: 11, total number of Ts: 6 Locations in RNA: 257 259 260 263 266 267 Locations in genome: 48975171 48975173 48975174 48975177 48975180 48975181 Upstream nucleotide (in genome): a a t a a t Upstream nucleotide summary: a: 4, c: 0, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): a t a a t n Downstream nucleotide summary: a: 3, c: 0, g: 0, t: 2, other: 1 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 1 >chr8:48974914-48975181 (+) ggctgagacgggcagatcacttgaggtcaggagcttgagaccagcctggccaacatgatgaaaccctgtctctactaaaaatacaaaaaattagccaggtgtggtggtgggtacttgtagtcccagctactcgggaggctgggcaggagaactacttgaaactggcagacagaggttgcagtgccgagagcgcaccactgctccagcctgggcaacagagcaagactccatctcaaaaaaaaaaaaaaaaagaaaaatattaataatt >CB857379:1-267 (+) ggctgagacgggcagatcacttgaggtcaggagcttgagaccagcctggccaacatgatgaaaccctgtctctactaaaaatacaaaaaattagccaggtgtggtggtgggtacttgtagtcccagctactcgggaggctgggcaggagaactacttgaaactggcagacagaggttgcagtgccgagagcgcaccactgctccagcctgggcaacagagcaagactccatctcaaaaaaaaaaaaaaaa-gaaaaaaaaaaaaaaaa End editing Edited EST: BF676024, type: at Aligns to: chr9:114294230-114294444 (++) All mismatches: ta (198), ta (205), ta (206), ta (207), ta (208), ta (214), ta (215), Editing mismatches: 7, all mismatches: 7, alignment length: 216, cluster length: 18, total number of Ts: 7 Locations in RNA: 198 205 206 207 208 214 215 Locations in genome: 114294426 114294433 114294434 114294435 114294436 114294442 114294443 Upstream nucleotide (in genome): a a t t t a t Upstream nucleotide summary: a: 3, c: 0, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a t t t a t a Downstream nucleotide summary: a: 3, c: 0, g: 0, t: 4, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 0, tt: 2, other: 0 >chr9:114294230-114294444 (+) tgtgattacaggcattagccactgtgcccagacagaaatacatgtccttaaatcttaacatgataaagaacatccttggctgggtacagtggatcatgcctgtaatcccatcactttgggaggccggggtgggaggattgcttgagcctgggagttcgagagcagtctgggcaacatagcgagaccctcgtctata-taaaaaattttaaaaatta >BF676024:1-216 (+) tgtgattacaggcattagccactgtgcccagacagaaatacatgtccttaaatcttaacatgataaagaacatccttggctgggtacagtggatcatgcctgtaatcccatcactttgggaggccggggtgggaggattgcttgagcctgggagttcgagagcagtctgggcaacatagcgagaccctcgtctatacaaaaaaaaaaaaaaaaaaa End editing Edited EST: DW434186, type: at Aligns to: chrX:46926182-46926404 (++) All mismatches: ta (216), ta (221), ta (225), ta (229), ta (236), ta (237), ta (238), Editing mismatches: 7, all mismatches: 7, alignment length: 222, cluster length: 24, total number of Ts: 7 Locations in RNA: 216 221 225 229 236 237 238 Locations in genome: 46926381 46926386 46926390 46926394 46926402 46926403 46926404 Upstream nucleotide (in genome): a a a a a t t Upstream nucleotide summary: a: 5, c: 0, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): a a a a t t n Downstream nucleotide summary: a: 4, c: 0, g: 0, t: 2, other: 1 Dinucleotide summary: aa: 4, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 1, other: 1 >chrX:46926182-46926404 (+) tggccaacacggcaaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggcaggtgcctgtaatcccagctacttggtaggctgatgcatgagaatcgcttgaaccctgaaggcagaggttgcagtgagccaagattgtgccactgcactccagcctgggtgacagagcgagactctgtctcaaaaaaataaaataaataaataaaaacattt >DW434186:17-238 (+) tggccaacacggcaaaaccccgtctctactaaaaatacaaaaattagccgggcgtggtggcaggtgcctgtaatcccagctacttggtaggctgatgcatgagaatcgcttgaaccctgaaggcagaggttgcagtgagccaagattgtgccactgcactccagcctgggtgacagagcgagactctgtctcaaaaaaaaaaaaaaaaaaaaaaaaaa-aaaa End editing Edited EST: BU934281, type: at Aligns to: chrX:70520859-70521022 (++) All mismatches: ta (160), ta (164), ta (165), ta (166), ta (167), Editing mismatches: 5, all mismatches: 5, alignment length: 165, cluster length: 7, total number of Ts: 5 Locations in RNA: 160 164 165 166 167 Locations in genome: 70521016 70521019 70521020 70521021 70521022 Upstream nucleotide (in genome): t a t t t Upstream nucleotide summary: a: 1, c: 0, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): a t t t n Downstream nucleotide summary: a: 1, c: 0, g: 0, t: 3, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 2, other: 1 >chrX:70520859-70521022 (+) gacagtagctcttagactcgcctatcttaggtagtcatgctgtgcattttttttttcattggtgtactgtgtttgatttgtctcatatatttggagtttttctgaaaaatggagcagtaatgcagcatcaacctattaaaatacattttaagcctttt-aatttt >BU934281:3-167 (+) gacagtagctcttagactcgcctatcttaggtagtcatgctgtgcattttttttttcattggtgtactgtgtttgatttgtctcatatatttggagtttttctgaaaaatggagcagtaatgcagcatcaacctattaaaatacattttaagcctttanaaaaaa End editing Edited EST: BG250709, type: at Aligns to: chrX:152037628-152037912 (++) All mismatches: ta (281), ta (282), ta (283), ta (284), ta (285), Editing mismatches: 5, all mismatches: 5, alignment length: 285, cluster length: 5, total number of Ts: 5 Locations in RNA: 281 282 283 284 285 Locations in genome: 152037908 152037909 152037910 152037911 152037912 Upstream nucleotide (in genome): c t t t t Upstream nucleotide summary: a: 0, c: 1, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): t t t t n Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 4, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 3, other: 1 >chrX:152037628-152037912 (+) cagagctttcgccacctgcggagggtcaagtgagggacactggaggctgggctctctcgacacgttgctcagccagtcactccttcccctgtggattgatgaaataacatcctttgaatgagtttgctctgagcctgtgactccttctgctaggcagagagcgcaccctactctttccgtgacgatgagggcggcaaaaacagacatttcttccttcatggaactggatttggatttcttgaagcaggcagcttcatattataccgatttgttctctgtcttttt >BG250709:1-285 (+) cagagctttcgccacctgcggagggtcaagtgagggacactggaggctgggctctctcgacacgttgctcagccagtcactccttcccctgtggattgatgaaataacatcctttgaatgagtttgctctgagcctgtgactccttctgctaggcagagagcgcaccctactctttccgtgacgatgagggcggcaaaaacagacatttcttccttcatggaactggatttggatttcttgaagcaggcagcttcatattataccgatttgttctctgtcaaaaa End editing Edited EST: BG483787, type: at Aligns to: chrX:23802525-23802695 (++) All mismatches: ta (161), ta (164), ta (166), ta (167), ta (169), ta (170), Editing mismatches: 6, all mismatches: 6, alignment length: 170, cluster length: 10, total number of Ts: 10 Locations in RNA: 161 164 166 167 169 170 Locations in genome: 23802686 23802689 23802691 23802692 23802694 23802695 Upstream nucleotide (in genome): c t t t t t Upstream nucleotide summary: a: 0, c: 1, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): t t t t t n Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 5, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 4, other: 1 >chrX:23802525-23802695 (+) ggtcctattatcacacacttcaaacacggtagatcagaaacccactatgatactcgcttcctgtctgtttgctaaggaatataaaatggctagaaagtttaatttgaaacctttgcctccatttggaatagtagacaccagttaagagggtgtcagatgcctttttttttt >BG483787:1-170 (+) ggtcctattatcacacacttcaaacacggtagatcagaaacccactatgatactcgcttcctgtctgtt-gctaaggaatataaaatggctagaaagtttaatttgaaacctttgcctccatttggaatagtagacaccagttaagagggtgtcagatgccattataataa End editing Edited EST: AV732982, type: at Aligns to: chrX:37000796-37001026 (++) All mismatches: ta (217), ta (219), ta (221), ta (223), ta (225), ta (227), ta (229), ta (231), Editing mismatches: 8, all mismatches: 8, alignment length: 231, cluster length: 15, total number of Ts: 8 Locations in RNA: 217 219 221 223 225 227 229 231 Locations in genome: 37001012 37001014 37001016 37001018 37001020 37001022 37001024 37001026 Upstream nucleotide (in genome): a a a a a a a a Upstream nucleotide summary: a: 8, c: 0, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a a a a a a a n Downstream nucleotide summary: a: 7, c: 0, g: 0, t: 0, other: 1 Dinucleotide summary: aa: 7, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chrX:37000796-37001026 (+) agcagcctggccaacatggtgaaaccccatctctaccgaaaataaaaaagattagctgggcgtggtggcacacgcctgtgatcccagctacttgggaggctgaggcaggagaatcgcttaaacctgggaggcggaggttgcagtgagccaagatcatgccattgcactccagcttgggcaacaagagcgaaactccatctcaaaaaaaaaaaaaaatatatatatatatat >AV732982:1-231 (+) agcagcctggccaacatggtgaaaccccatctctaccgaaaataaaaaagattagctgggcgtggtggcacacgcctgtgatcccagctacttgggaggctgaggcaggagaatcgcttaaacctgggaggcggaggttgcagtgagccaagatcatgccattgcactccagcttgggcaacaagagcgaaactccatctcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa End editing Edited EST: BU953472, type: at Aligns to: chr10:32298850-32299039 (+-) All mismatches: at (178), at (180), at (186), at (188), at (189), at (190), Editing mismatches: 6, all mismatches: 6, alignment length: 188, cluster length: 15, total number of As: 6 Locations in RNA: 178 180 186 188 189 190 Locations in genome: 32298864 32298861 32298854 32298852 32298851 32298850 Upstream nucleotide (in genome): t g g a a n Upstream nucleotide summary: a: 2, c: 0, g: 2, t: 1, other: 1 Downstream nucleotide (in genome): t c t g a a Downstream nucleotide summary: a: 2, c: 1, g: 1, t: 2, other: 0 Dinucleotide summary: aa: 1, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 1, gg: 0, gt: 1, ta: 0, tc: 0, tg: 0, tt: 1, other: 1 >chr10:32298850-32299039 (+) aaagatttttgactattaaaaaaataaataaataaatttatattttaaatcaaaattattacaaaagtggaaattacaatagttacggaaatagaaaaataagccaattatgatctgagtcttctgactatggctccaaatttaatacaaatatctgtgtataaaacttttgcaaaaagttaattctgcc >BU953472:3-190 (-) tttgtttttt-t-ttttaaaaaaataaataaataaatttatattttaaatcaaaattattacaaaagtggaaattacaatagttacggaaatagaaaaataagccaattatgatctgagtcttctgactatggctccaaatttaatacaaatatctgtgtataaaacttttgcaaaaagttaattctgcc End editing Edited EST: BG219373, type: at Aligns to: chr11:110242504-110242727 (+-) All mismatches: at (294), at (297), at (298), at (299), at (300), Editing mismatches: 5, all mismatches: 5, alignment length: 225, cluster length: 7, total number of As: 5 Locations in RNA: 294 297 298 299 300 Locations in genome: 110242510 110242507 110242506 110242505 110242504 Upstream nucleotide (in genome): t a a a n Upstream nucleotide summary: a: 3, c: 0, g: 0, t: 1, other: 1 Downstream nucleotide (in genome): g t a a a Downstream nucleotide summary: a: 3, c: 0, g: 1, t: 1, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 1, tt: 0, other: 1 >chr11:110242504-110242727 (+) aaaatta-ggggcttaacacaacagaaatttattctttcacagttctggggtccagaaatctaaactcagtttcattaggcctaaatcaaggtgttggcagggcctctttcggcttctggtggctgctggcattccttggcttgtgactccatcactccagtttctgcatgatcacaatttcctcctcctcttctgttggtaccaaatctccttcagcctctctc >BG219373:76-300 (-) tttttttgggggcttaacacaacagaaatttattctttcacagttctggggtccagaaatctaaactcagtttcattaggcctaaatcaaggtgttggcagggcctctttcggcttctggtggctgctggcattccttggcttgtgactccatcactccagtttctgcatgatcacaatttcctcctcctcttctgttggtaccaaatctccttcagcctctctc End editing Edited EST: CK300826, type: at Aligns to: chr13:46675232-46675500 (+-) All mismatches: ta (1), ta (2), ta (3), ta (4), ta (9), ta (10), ta (11), ta (12), ta (13), ta (14), Editing mismatches: 10, all mismatches: 10, alignment length: 266, cluster length: 16, total number of Ts: 10 Locations in RNA: 1 2 3 4 9 10 11 12 13 14 Locations in genome: 46675500 46675499 46675498 46675497 46675491 46675490 46675489 46675488 46675486 46675485 Upstream nucleotide (in genome): t t t a t t t c t a Upstream nucleotide summary: a: 2, c: 1, g: 0, t: 7, other: 0 Downstream nucleotide (in genome): n t t t a t t t c t Downstream nucleotide summary: a: 1, c: 1, g: 0, t: 7, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 1, tg: 0, tt: 4, other: 1 >chr13:46675232-46675500 (+) aacgaggtgagtctcagccaatcacagcagccaagctacagccaatcccatgtggccaactgatcagcctatgcccagtaagacaactgctcacctgtaactactcaagctgcttctggacctcatttccatttgctgtttataagtgctgcctgcccactttgctgagcagaactctctgaacttctttcgtttttgagggttacttgattagaaaattgttctttgttcaattaaattttgctaaatataattcttttaaagatttt >CK300826:1-266 (-) aac-aggtgagtctcagccaatcacagcagccaagctacagccaatcccatgtggccaactgatcagcctatgcccagtaagacaactgctcacctgtaactactcaagctgcttctggacctcatttccatttgctgtttataagtgctgcctgcccactttgctgagcagaactctctgaacttctttcgtttttgagggttacttgattagaaaattgttctttgttcaattaaattttgctaaatataaaa-aaaaaaa-aaaaa End editing Edited EST: AW069038, type: at Aligns to: chr14:75203074-75203399 (+-) All mismatches: ta (7), ta (8), ta (9), ta (10), ta (11), ta (18), Editing mismatches: 6, all mismatches: 6, alignment length: 326, cluster length: 12, total number of Ts: 6 Locations in RNA: 7 8 9 10 11 18 Locations in genome: 75203399 75203398 75203397 75203396 75203395 75203388 Upstream nucleotide (in genome): t t t t a a Upstream nucleotide summary: a: 2, c: 0, g: 0, t: 4, other: 0 Downstream nucleotide (in genome): n t t t t a Downstream nucleotide summary: a: 1, c: 0, g: 0, t: 4, other: 1 Dinucleotide summary: aa: 1, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 3, other: 1 >chr14:75203074-75203399 (+) cactgcattccagcctgggtgacagagtgagactgtctcaaaaaaaaaaaaaaattaatgatggtcaaagggtataaaatctcagacaggaagaatatgttttatgctttttttgagttctgttgtacagtgtggtgcctatacttaataatggggtattatacatttcaaaattgatgttctcatcacagaaatgtatttgaagtattgcatatgttaactagcttgatttaactattccatattgtatccacaatttatgatatcactttgtaacccatacatttatacaattataaattgtcaatttacaataaaaaattttt >AW069038:7-332 (-) cactgcattccagcctgggtgacagagtgagactgtntcaaaaaaaaaaaaaaattaatgatggtcaaagggtataaaatctcagacaggaagaatatgttttatgctttttttgagttctgttgtacagtgtggtgcctatacttaataatggggtattatacatttcaaaattgatgttctcatcacagaaatgtatttgaagtattgcatatgttaactagcttgatttaactattccatattgtatccacaatttatgatatcactttgtaacccatacatttatacaattataaattgtcaatttacaaaaaaaaaaaaaa End editing Edited EST: CD300655, type: at Aligns to: chr15:85234766-85234887 (+-) All mismatches: at (84), at (87), at (88), at (90), at (91), Editing mismatches: 5, all mismatches: 5, alignment length: 125, cluster length: 8, total number of As: 6 Locations in RNA: 84 87 88 90 91 Locations in genome: 85234887 85234884 85234883 85234881 85234880 Upstream nucleotide (in genome): a a g a c Upstream nucleotide summary: a: 3, c: 1, g: 1, t: 0, other: 0 Downstream nucleotide (in genome): n c a g a Downstream nucleotide summary: a: 2, c: 1, g: 1, t: 0, other: 1 Dinucleotide summary: aa: 0, ac: 1, ag: 1, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr15:85234766-85234887 (+) ctgagcaccactacaatcggactttcacttccagttattaccattaaccccttccagatcattagtgccgatgagacaatcattccaaaatttaggacttgataatagagctgc---aagaacaa >CD300655:84-208 (-) ctgagcaccactacaatcggactttcacttccagttattaccattaaccccttccagatcattagtgccgatgagacaatcattccaaaatttaggacttgataatagagctgccgcttgttcat End editing Edited EST: DW427553, type: at Aligns to: chr17:44096352-44096597 (+-) All mismatches: at (228), at (229), at (233), at (236), at (243), at (247), at (259), Editing mismatches: 7, all mismatches: 7, alignment length: 244, cluster length: 33, total number of As: 7 Locations in RNA: 228 229 233 236 243 247 259 Locations in genome: 44096384 44096383 44096379 44096375 44096369 44096365 44096352 Upstream nucleotide (in genome): a t t t t t n Upstream nucleotide summary: a: 1, c: 0, g: 0, t: 5, other: 1 Downstream nucleotide (in genome): g a t t t t g Downstream nucleotide summary: a: 1, c: 0, g: 2, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 4, other: 1 >chr17:44096352-44096597 (+) agtttttgtttttatttat-ttttatgtatttaaggcagggtctctgtattagtccattctcacactgctaataaagacatacccaagactgggtaatttataaaggaaagaggtttaatggactcacagttccacatggctggggaggcctcaaaatcatggcggaaggcaaaggagaagcaaaggcatttcttacatggcgacaggcaagagagcgtgtgcaggggaactcccatttataaaacc >DW427553:16-259 (-) tgttttt-tttttttttttctttttt-ttttttt-gcagggtctctgtattagtccattctcacactgctaataaagacatacccaagactgggtaatttataaaggaaagaggtttaatggactcacagttccacatggctggggaggcctcaaaatcatggcggaaggcaaaggagaagcaaaggcatttcttacatggcgacaggcaagagagcgtgtgcaggggaactcccatttataaaacc End editing Edited EST: DW423418, type: at Aligns to: chr19:8099808-8100081 (+-) All mismatches: at (137), at (140), at (164), at (165), at (167), at (173), at (175), at (191), at (206), Editing mismatches: 9, all mismatches: 9, alignment length: 275, cluster length: 69, total number of As: 38 Locations in RNA: 137 140 164 165 167 173 175 191 206 Locations in genome: 8099961 8099958 8099935 8099934 8099932 8099926 8099924 8099908 8099893 Upstream nucleotide (in genome): c t a a g a t a t Upstream nucleotide summary: a: 4, c: 1, g: 1, t: 3, other: 0 Downstream nucleotide (in genome): a a a a a a a a a Downstream nucleotide summary: a: 9, c: 0, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 0, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 3, tc: 0, tg: 0, tt: 0, other: 0 >chr19:8099808-8100081 (+) gataggacctttctctaggctgttaggggttgctttctccactctttaggctttgagtgtaatgtatccaggagttgatttctgtaacacatataatttaaactgtagaaaataataaaaattgaaaaacattaggcaa-gactagaatttaacaacaggtgtgctatagtttctgaaacataattttcactcttcagtttcccatttttattaaaagataaatcatggtaggactggtttgctttattatatttggcttaattatttgcataga >DW423418:17-291 (-) gataggacctttctctaggctgttaggggttgctttctccactctttaggctttgagtgtaatgtatccaggagttgatttctgttacacatataatttatactgtagaaaataattataattgtattacattaggcaatgactagaattttactacaggtgtgctatagtttctgaaacataattttcactcttcagtttcccatttttattaaaagataaatcatggtaggactggtttgctttattatatttggcttaattatttgcataga End editing Edited EST: BQ429404, type: at Aligns to: chr19:22593837-22594139 (+-) All mismatches: at (276), at (279), at (283), at (287), at (293), at (299), Editing mismatches: 6, all mismatches: 6, alignment length: 302, cluster length: 25, total number of As: 6 Locations in RNA: 276 279 283 287 293 299 Locations in genome: 22593866 22593862 22593858 22593854 22593848 22593842 Upstream nucleotide (in genome): t t t t t t Upstream nucleotide summary: a: 0, c: 0, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): t c t t t t Downstream nucleotide summary: a: 0, c: 1, g: 0, t: 5, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 5, other: 0 >chr19:22593837-22594139 (+) tttttatttttatttttatttatttacttattgagtctcgctctgttgcccaggctagagtgcagtggcgagatctgcacttactgcaacctctgcctcccaggttcaagctgttcttctgtctcagccttccgagtagctggaactacaggcatgcgccaccatgcctggctaattttttttgtagagccaggatctcaccatgttggtcaggctggtctcaaactcctgacctcaaatgatctgcccatctcagactcccaaagcgctgggattataggtgtgagccaccgcacccagccc >BQ429404:3-304 (-) tttttttttttttttttttttttttt-tttnngagtctcgctctgttgcccaggctagagtgcagtggcgagatctgcacttactgcaacctctgcctcccaggttcaagctgttcttctgtctcagccttccgagtagctggaactacaggcatgcgccaccatgcctggctaattttttttgtagagccaggatctcaccatgttggtcaggctggtctcaaactcctgacctcaaatgatctgcccatctcagactcccaaagcgctgggattataggtgtgagccaccgcacccagccc End editing Edited EST: DW426565, type: at Aligns to: chr1:215808886-215809115 (+-) All mismatches: at (221), at (225), at (229), at (233), at (237), at (241), Editing mismatches: 6, all mismatches: 6, alignment length: 229, cluster length: 21, total number of As: 6 Locations in RNA: 221 225 229 233 237 241 Locations in genome: 215808909 215808905 215808901 215808897 215808893 215808889 Upstream nucleotide (in genome): t t t t t t Upstream nucleotide summary: a: 0, c: 0, g: 0, t: 6, other: 0 Downstream nucleotide (in genome): t t t t t t Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 6, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 6, other: 0 >chr1:215808886-215809115 (+) tttatttatttatttatttatttattttttgagatggagtcttgctctgtcacccaggttggagtgcagtggtgtgatctccgctcactgcaacctctgcctcttgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacaggtgtgcgccactatgcctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggatggtc >DW426565:16-244 (-) tttttttttttttttttttttttttttttt-agatggagtcttgctctgtcacccaggttggagtgcagtggtgtgatctccgctcactgcaacctctgcctcttgggttcaagtgattctcctgcctcagcctcccaagtagctgggattacaggtgtgcgccactatgcctggctaatttttgtatttttagtagagatggggtttcaccatgttggccaggatggtc End editing Edited EST: DW430723, type: at Aligns to: chr1:920004-920228 (+-) All mismatches: at (215), at (219), at (223), at (227), at (231), at (235), at (239), Editing mismatches: 7, all mismatches: 7, alignment length: 225, cluster length: 25, total number of As: 7 Locations in RNA: 215 219 223 227 231 235 239 Locations in genome: 920030 920026 920022 920018 920014 920010 920006 Upstream nucleotide (in genome): t t t t t t t Upstream nucleotide summary: a: 0, c: 0, g: 0, t: 7, other: 0 Downstream nucleotide (in genome): t t t t t t t Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 7, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 0, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 7, other: 0 >chr1:920004-920228 (+) ttatttatttatttatttatttatttatttatttgagatggggtttcgctctgtcgcccagactggagtgcagtggcgcaatcccagctcactgcagcctccacctcccaggctcaagtgatcctccagcctcagccttctgagtagctgggatcacagtcgccatcgccaagcccggcctccttttcattttttatagctttattgaagtataattaacacgta >DW430723:17-241 (-) ttttttttttttttttttttttttttttttatttgagatggggtttcgctctgtcgcccagactggagtgcagtggcgcaatcccagctcactgcagcctccacctcccaggctcaagtgatcctccagcctcagccttctgagtagctgggatcacagtcgccatcgccaagcccggcctccttttcattttttatagctttattgaagtataattaacacgta End editing Edited EST: CD511718, type: at Aligns to: chr1:163035620-163035904 (+-) All mismatches: at (268), at (269), at (270), at (271), at (277), at (278), at (288), Editing mismatches: 7, all mismatches: 7, alignment length: 286, cluster length: 21, total number of As: 7 Locations in RNA: 268 269 270 271 277 278 288 Locations in genome: 163035640 163035639 163035638 163035637 163035631 163035630 163035620 Upstream nucleotide (in genome): a a a t a t n Upstream nucleotide summary: a: 4, c: 0, g: 0, t: 2, other: 1 Downstream nucleotide (in genome): t a a a t a t Downstream nucleotide summary: a: 4, c: 0, g: 0, t: 3, other: 0 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 2, tc: 0, tg: 0, tt: 0, other: 1 >chr1:163035620-163035904 (+) atttttttttaatttttaaaattt-gtatatatttatgggttataagtgaaatctttttagatgcataggttgtatagtgataaaatcagggcttttagggtattcatcacctgaatgatgtacattgtaccccttaagtaatttctcaccatccgctgacttcttgccccctgggtattcatcacctgaatgatgtgcattgtaccccttaagtaatttctcaccatccgctgacttcttgccccctgggtattcatcacctgaatgatgtgcattgtacccctt >CD511718:3-288 (-) ttttttttttttttttttttttttggtatatatttatgggttataagtgaaatctttttagatgcataggttgtatagtgataaaatcagggcttttagggtattcatcacctgaatgatgtacattgtaccccttaagtaatttctcaccatccgctgacttcttgccccctgggtattcatcacctgaatgatgtgcattgtaccccttaagtaatttctcaccatccgctgacttcttgccccctgggtattcatcacctgaatgatgtgcattgtacccctt End editing Edited EST: AW976992, type: at Aligns to: chr1:154604262-154604442 (+-) All mismatches: ta (112), ta (113), ta (114), ta (115), ta (116), ta (117), Editing mismatches: 6, all mismatches: 6, alignment length: 181, cluster length: 6, total number of Ts: 6 Locations in RNA: 112 113 114 115 116 117 Locations in genome: 154604442 154604441 154604440 154604439 154604438 154604437 Upstream nucleotide (in genome): t t t t t a Upstream nucleotide summary: a: 1, c: 0, g: 0, t: 5, other: 0 Downstream nucleotide (in genome): n t t t t t Downstream nucleotide summary: a: 0, c: 0, g: 0, t: 5, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 4, other: 1 >chr1:154604262-154604442 (+) caaaaaacaaaaaccaaacaaaacagaacagaacagcacagcaaaaccatctcggctgggtattttccttgtgtgaagtttgtaaaatacgactttggtttatttaatagttatgaaactgttcaattattttctttctccttgagtcagtttaataaaataataggttctagaatttttt >AW976992:112-292 (-) caaaaaacaaaaaccaaacaaaacagaacagaacagcacagcaaaaccatctcggctgggtattttccttgtgtgaagtttgtaaaatacgactttggtttatttaatagttatgaaactgttcaattnttttctttctccttgagtcagtttaataaaataataggttctagaaaaaaaa End editing Edited EST: AW362029, type: at Aligns to: chr2:54893068-54893225 (+-) All mismatches: at (356), at (360), at (363), at (399), at (452), at (453), gt (458), at (474), at (477), at (484), at (495), Editing mismatches: 10, all mismatches: 11, alignment length: 159, cluster length: 139, total number of As: 46 Locations in RNA: 356 360 363 399 452 453 474 477 484 495 Locations in genome: 54893207 54893203 54893201 54893165 54893113 54893112 54893091 54893088 54893080 54893069 Upstream nucleotide (in genome): a g a a a c a a a t Upstream nucleotide summary: a: 7, c: 1, g: 1, t: 1, other: 0 Downstream nucleotide (in genome): a a g a a a a g a t Downstream nucleotide summary: a: 7, c: 0, g: 2, t: 1, other: 0 Dinucleotide summary: aa: 5, ac: 0, ag: 2, at: 0, ca: 1, cc: 0, cg: 0, ct: 0, ga: 1, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 1, other: 0 >chr2:54893068-54893225 (+) tattgtgtcataaataaccaagaaatgggtttctacaaagatgcaaagactgctgcttctggaattccctaccacagcgaggtccctgtg-agtttgaaagaagctgtctgcgaagtggcccttgattacaaaaa-gaagaaacacgtattcaagctaag >AW362029:338-496 (-) ttttgtgtcatatataacc-tgatatgggtttctacaaatatgcttagactgctgcttctggaattccctaccacagcgaggtccctgtgtagtttgatagaagctgtctgcgaagtggcccttgattacaaaatagtagatacacgtattcaagctaag End editing Edited EST: AW951284, type: at Aligns to: chr2:232320111-232320289 (+-) All mismatches: at (70), at (84), at (169), at (192), at (196), at (216), Editing mismatches: 6, all mismatches: 6, alignment length: 179, cluster length: 147, total number of As: 28 Locations in RNA: 70 84 169 192 196 216 Locations in genome: 232320263 232320249 232320164 232320141 232320137 232320117 Upstream nucleotide (in genome): c a c a c a Upstream nucleotide summary: a: 3, c: 3, g: 0, t: 0, other: 0 Downstream nucleotide (in genome): a c c a c a Downstream nucleotide summary: a: 3, c: 3, g: 0, t: 0, other: 0 Dinucleotide summary: aa: 2, ac: 1, ag: 0, at: 0, ca: 1, cc: 2, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 0 >chr2:232320111-232320289 (+) cctccaaagcctccccggcctctgccaccaaatcctcctcggcctcctctaccaccacctcgtcctccaaagccgcctctgcctccaccacgacccccgaagccaccttcacccttaggtttggcccagtccaaggtaactttatttccatcaatttcaccgtcttccatggcctcctt >AW951284:44-222 (-) cctccatagcctccccggcctctgcctccatatcctcctcggcctcctctacctccacctcgtcctccaaagccgcctctgcctccaccacgacccccgaagccaccttcacccttaggtttggcccagtccaaggtatctttatttccatctatttcaccgtcttccatggcctcctt End editing Edited EST: AI174667, type: at Aligns to: chr2:225721866-225722085 (+-) All mismatches: ta (205), ta (210), ta (216), ta (217), ta (218), ta (222), ta (223), ta (226), ta (227), ta (228), Editing mismatches: 10, all mismatches: 10, alignment length: 220, cluster length: 24, total number of Ts: 17 Locations in RNA: 205 210 216 217 218 222 223 226 227 228 Locations in genome: 225721889 225721884 225721879 225721878 225721877 225721873 225721872 225721868 225721867 225721866 Upstream nucleotide (in genome): a t t t c t g t t n Upstream nucleotide summary: a: 1, c: 1, g: 1, t: 6, other: 1 Downstream nucleotide (in genome): t a a t t a t t t t Downstream nucleotide summary: a: 3, c: 0, g: 0, t: 7, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 1, ga: 0, gc: 0, gg: 0, gt: 1, ta: 3, tc: 0, tg: 0, tt: 3, other: 1 >chr2:225721866-225722085 (+) tttttgttatcttt-aatttattatttttaactctgtatccgaagtgataacattccatattacaactatattttttatgatgtctcacatttaataacttgtatcaaaaccttggagtatcagggaagtggagaagaataggaacacaagttactcttttaaattatgtttccaagacaccttaaacctgggcaggacagagtcacttcaatttgggtgg >AI174667:9-228 (-) aaatt-aaatcaaacaattaattaattttaactctgtatccgaagtgataacattccatattacaactatattttttatgatgtctcacatttaataacttgtatcaaaaccttggagtatcagggaagtggagaagaataggaacacaagttactcttttaaattatgtttccaagacaccttaaacctgggcaggacagagtcacttcaatttgggtgg End editing Edited EST: BQ292174, type: at Aligns to: chr5:180666064-180666179 (+-) All mismatches: ta (83), ta (107), ta (112), ta (113), ta (118), ta (124), ta (135), ta (145), ta (189), ta (194), at (197), ta (198), Editing mismatches: 11, all mismatches: 12, alignment length: 116, cluster length: 116, total number of Ts: 30 Locations in RNA: 83 107 112 113 118 124 135 145 189 194 198 Locations in genome: 180666179 180666155 180666150 180666149 180666144 180666138 180666127 180666117 180666073 180666068 180666064 Upstream nucleotide (in genome): c c t c t a c t c c n Upstream nucleotide summary: a: 1, c: 6, g: 0, t: 3, other: 1 Downstream nucleotide (in genome): n t c t g g g c c t a Downstream nucleotide summary: a: 1, c: 3, g: 3, t: 3, other: 1 Dinucleotide summary: aa: 0, ac: 0, ag: 1, at: 0, ca: 0, cc: 1, cg: 1, ct: 3, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 2, tg: 1, tt: 0, other: 2 >chr5:180666064-180666179 (+) taccttgcctccagaagcacagagggatccatctggagagacagtcaccgtgttcagatagcctgtgtggccaatgtggttggtcttcagcttgcagttagccaggttccatacct >BQ292174:83-198 (-) atccatgccaccagaagcacagagggatccatctggagagacagtcaccgtgtacagatagccagtgtggccaaagtggtaggtcaacagcatgcagttagccaggttccatacca End editing Edited EST: CB857378, type: at Aligns to: chr8:48974914-48975181 (+-) All mismatches: ta (30), ta (31), ta (34), ta (37), ta (38), ta (40), Editing mismatches: 6, all mismatches: 6, alignment length: 267, cluster length: 11, total number of Ts: 6 Locations in RNA: 30 31 34 37 38 40 Locations in genome: 48975181 48975180 48975177 48975174 48975173 48975171 Upstream nucleotide (in genome): t a a t a a Upstream nucleotide summary: a: 4, c: 0, g: 0, t: 2, other: 0 Downstream nucleotide (in genome): n t a a t a Downstream nucleotide summary: a: 3, c: 0, g: 0, t: 2, other: 1 Dinucleotide summary: aa: 2, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 1, tc: 0, tg: 0, tt: 0, other: 1 >chr8:48974914-48975181 (+) ggctgagacgggcagatcacttgaggtcaggagcttgagaccagcctggccaacatgatgaaaccctgtctctactaaaaatacaaaaaattagccaggtgtggtggtgggtacttgtagtcccagctactcgggaggctgggcaggagaactacttgaaactggcagacagaggttgcagtgccgagagcgcaccactgctccagcctgggcaacagagcaagactccatctcaaaaaaaaaaaaaaaaagaaaaatattaataatt >CB857378:30-296 (-) ggctgagacgggcagatcacttgaggtcaggagcttgagaccagcctggccaacatgatgaaaccctgtctctactaaaaatacaaaaaattagccaggtgtggtggtgggtacttgtagtcccagctactcgggaggctgggcaggagaactacttgaaactggcagacagaggttgcagtgccgagagcgcaccactgctccagcctgggcaacagagcaagactccatctcaaaaaaaaaaaaaaaa-gaaaaaaaaaaaaaaaa End editing Edited EST: BF691045, type: at Aligns to: chr9:42236361-42236798 (+-) All mismatches: at (433), at (434), at (435), at (436), at (437), at (438), Editing mismatches: 6, all mismatches: 6, alignment length: 438, cluster length: 6, total number of As: 6 Locations in RNA: 433 434 435 436 437 438 Locations in genome: 42236366 42236365 42236364 42236363 42236362 42236361 Upstream nucleotide (in genome): a a a a a n Upstream nucleotide summary: a: 5, c: 0, g: 0, t: 0, other: 1 Downstream nucleotide (in genome): t a a a a a Downstream nucleotide summary: a: 5, c: 0, g: 0, t: 1, other: 0 Dinucleotide summary: aa: 4, ac: 0, ag: 0, at: 1, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 0, tg: 0, tt: 0, other: 1 >chr9:42236361-42236798 (+) aaaaaatgccagcaaacattttattggaaacaaagaaaattagaagataatgaagcaacatctttaaagtactggaagataaacattgtcagctgggaattgtagactcagagaaactatctttcaagatgtaggtgaaataaagattttgttcaggcacttagaacctgaaagaaatcatcacc-agtaaaacaacactataaaaaatgttaaagaaaatgtttcaggcagaagtaaaataatatcaaaaggaaatttggatctacatagaagaatgaaaagcactggaaatggtatcaacatggttaaatatataagatccttttatttctgtttgaattcaattgattgtttaaacaaggggtcagcaagctatagcttcatgggtggactgcctgtttatgtgaacaaatttttactgagacacattcatgctca >BF691045:1-438 (-) tttttttgccagcaaacattttattggaaacaaagaaaattagaagataatgaagcaacatctttaaagtactggaagataaacattgtcagctgggaattgtagactcagagaaactatctttcaagatgtaggtgaaataaagattttgttcaggcacttagaacctgaaagaaatcatcaccaagtaaaac-acactataaaaaatgttaaagaaaatgtttcaggcagaagtaaaataatatcaaaaggaaatttggatctacatagaagaatgaaaagcactggaaatggtatcaacatggttaaatatataagatccttttatttctgtttgaattcaattgattgtttaaacaaggggtcagcaagctatagcttcatgggtggactgcctgtttatgtgaacaaatttttactgagacacattcatgctca End editing Edited EST: H81445, type: at Aligns to: chrX:128311123-128311469 (+-) All mismatches: ta (315), ta (316), ta (326), ta (328), ta (347), Editing mismatches: 5, all mismatches: 5, alignment length: 348, cluster length: 32, total number of Ts: 15 Locations in RNA: 315 316 326 328 347 Locations in genome: 128311155 128311154 128311145 128311143 128311124 Upstream nucleotide (in genome): t a t a t Upstream nucleotide summary: a: 2, c: 0, g: 0, t: 3, other: 0 Downstream nucleotide (in genome): t t c t t Downstream nucleotide summary: a: 0, c: 1, g: 0, t: 4, other: 0 Dinucleotide summary: aa: 0, ac: 0, ag: 0, at: 2, ca: 0, cc: 0, cg: 0, ct: 0, ga: 0, gc: 0, gg: 0, gt: 0, ta: 0, tc: 1, tg: 0, tt: 2, other: 0 >chrX:128311123-128311469 (+) tttgtctgggaaagtctttattt-ctccctcatttctgaatgataattttgctggatatacaattatagggtaaaagtttatttccttcagcactttaaatttaacatgccactatctcctggcctgtaaaatttccactgaaaactttgctgccagacatattggaactccattgcatgttatttgcttcttttctcttgttgcttttaggaattttttttcttcaatctttgggagtttgattatttagtgtattgaggtagtcttatttaggttaaatctgtttggtgttttacagccttcttcaatattggtatctttctctaggtttggaaagctctctgtta >H81445:1-348 (-) tatgnctgggaaagtctttaatanctccctcaaatctgaatgataattttgctggatatacaattatagggtaaaagtntatttccttcagcactttaaatttaacatgccactatctcctggcctgtaaaatttccactgaaaactntgctgccagacatattggaactccattgcatgttatttgcttcttttctcttgttgcttttaggaattttttttcttcaatctttgggagtttgattatttagtgtattgaggtagtcttatttaggttaaatctgtttggtgttttacagccttcttcaatattggtatctttctctaggtttggaaagctctctgtta End editing