|||||||||||||||||||||||||||||||||||||||||||||||| || MysiRNA-Designer Results || || A Software For Rational siRNA Design || || Copyright (C) 2011 || |||||||||||||||||||||||||||||||||||||||||||||||| These siRNA designed to target mRNA(s) with the following Accession: NM_001667 NM_001199745 Using the following runtime parameters: mRNA refseq database PATH: d:\Mysirna_whole_genome\2\refseq_rna mRNA input accession number PATH: d:\test\acc.txt Output PATH: d:\test WEKA installation PATH: c:\Weka-3-7 RNAxs threshold on the 8 nts accessibility: 0.01157 RNAxs threshold on the 16 nts accessibility: 0.001002 Threshold for accepted siRNA: 90 >siRNAnum:18_iscore:76.7_SBiopredsi:0.846_DISR:88.3_reynold:5_UiTie:Ib_Amarzguioui:5_Katoh:73.2_Hiesh:3_Takasaki:7.8_ThermoComp21:0.91_Thermo19:0.94_Gwhole:-39.7_MysiRNA:91.431 AntiSense: UUCCUGUUGGCUAUCACGCuc Sense: GCGUGAUAGCCAACAGGAA >siRNAnum:155_iscore:59.2_SBiopredsi:0.748_DISR:78.5_reynold:5_UiTie:Ib_Amarzguioui:3_Katoh:53.8_Hiesh:2_Takasaki:-7.3_ThermoComp21:0.78_Thermo19:0.76_Gwhole:-40.0_MysiRNA:83.586 AntiSense: AUUGUCCAGGCCAAGCAUGag Sense: CAUGCUUGGCCUGGACAAU >siRNAnum:181_iscore:68.9_SBiopredsi:0.847_DISR:92.9_reynold:9_UiTie:II_Amarzguioui:2_Katoh:80.0_Hiesh:1_Takasaki:-1.6_ThermoComp21:0.95_Thermo19:0.94_Gwhole:-37.0_MysiRNA:93.587 AntiSense: UUCUUCAGGAUGGUUGUCUuu Sense: AGACAACCAUCCUGAAGAA >siRNAnum:188_iscore:60.3_SBiopredsi:0.752_DISR:83.9_reynold:5_UiTie:Ia_Amarzguioui:3_Katoh:70.2_Hiesh:1_Takasaki:8.1_ThermoComp21:0.77_Thermo19:0.76_Gwhole:-33.5_MysiRNA:85.822 AntiSense: AUUGAACUUCUUCAGGAUGgu Sense: CAUCCUGAAGAAGUUCAAU >siRNAnum:208_iscore:73.1_SBiopredsi:0.821_DISR:87.1_reynold:5_UiTie:Ib_Amarzguioui:4_Katoh:63.8_Hiesh:3_Takasaki:7.4_ThermoComp21:0.91_Thermo19:0.94_Gwhole:-42.4_MysiRNA:87.941 AntiSense: AUGGUGUCGAUGUCCUCCCca Sense: GGGAGGACAUCGACACCAU >siRNAnum:216_iscore:48.7_SBiopredsi:0.615_DISR:71.7_reynold:5_UiTie:II_Amarzguioui:1_Katoh:49.4_Hiesh:-1_Takasaki:-4.0_ThermoComp21:0.73_Thermo19:0.73_Gwhole:-41.1_MysiRNA:75.489 AntiSense: UUGGGGAGAUGGUGUCGAUgu Sense: AUCGACACCAUCUCCCCAA >siRNAnum:231_iscore:59.3_SBiopredsi:0.765_DISR:78.8_reynold:5_UiTie:Ia_Amarzguioui:3_Katoh:54.9_Hiesh:1_Takasaki:-2.4_ThermoComp21:0.76_Thermo19:0.78_Gwhole:-41.2_MysiRNA:80.743 AntiSense: UGUUGAAGCCCAGCGUUGGgg Sense: CCAACGCUGGGCUUCAACA >siRNAnum:241_iscore:65.8_SBiopredsi:0.684_DISR:78.7_reynold:5_UiTie:II_Amarzguioui:3_Katoh:75.3_Hiesh:3_Takasaki:9.7_ThermoComp21:0.72_Thermo19:0.84_Gwhole:-38.0_MysiRNA:84.732 AntiSense: AGGGUCUUGAUGUUGAAGCcc Sense: GCUUCAACAUCAAGACCCU >siRNAnum:327_iscore:60.7_SBiopredsi:0.634_DISR:72.9_reynold:5_UiTie:II_Amarzguioui:3_Katoh:74.4_Hiesh:-1_Takasaki:0.4_ThermoComp21:0.73_Thermo19:0.82_Gwhole:-37.3_MysiRNA:84.261 AntiSense: UGCUCUCAAAGUAGUUCCGcc Sense: CGGAACUACUUUGAGAGCA >siRNAnum:328_iscore:59.8_SBiopredsi:0.687_DISR:73.5_reynold:5_UiTie:II_Amarzguioui:1_Katoh:77.1_Hiesh:2_Takasaki:9.7_ThermoComp21:0.76_Thermo19:0.82_Gwhole:-37.1_MysiRNA:85.478 AntiSense: GUGCUCUCAAAGUAGUUCCgc Sense: GGAACUACUUUGAGAGCAC >siRNAnum:626_iscore:53.3_SBiopredsi:0.684_DISR:73.3_reynold:5_UiTie:II_Amarzguioui:2_Katoh:60.5_Hiesh:1_Takasaki:5.3_ThermoComp21:0.68_Thermo19:0.69_Gwhole:-39.0_MysiRNA:76.53 AntiSense: AGCUGUGAAAAUGCGGCUGga Sense: CAGCCGCAUUUUCACAGCU >siRNAnum:632_iscore:64.3_SBiopredsi:0.791_DISR:83.0_reynold:5_UiTie:Ib_Amarzguioui:2_Katoh:65.5_Hiesh:1_Takasaki:3.0_ThermoComp21:0.76_Thermo19:0.80_Gwhole:-35.6_MysiRNA:87.838 AntiSense: UCAGUCAGCUGUGAAAAUGcg Sense: CAUUUUCACAGCUGACUGA >siRNAnum:641_iscore:58.2_SBiopredsi:0.764_DISR:82.8_reynold:5_UiTie:II_Amarzguioui:2_Katoh:53.1_Hiesh:0_Takasaki:-4.0_ThermoComp21:0.74_Thermo19:0.76_Gwhole:-41.5_MysiRNA:78.802 AntiSense: UGGAGUGGUUCAGUCAGCUgu Sense: AGCUGACUGAACCACUCCA >siRNAnum:644_iscore:53.2_SBiopredsi:0.588_DISR:70.0_reynold:5_UiTie:II_Amarzguioui:0_Katoh:65.9_Hiesh:1_Takasaki:-0.7_ThermoComp21:0.67_Thermo19:0.72_Gwhole:-39.5_MysiRNA:75.373 AntiSense: AUCUGGAGUGGUUCAGUCAgc Sense: UGACUGAACCACUCCAGAU >siRNAnum:656_iscore:55.6_SBiopredsi:0.702_DISR:72.9_reynold:5_UiTie:II_Amarzguioui:2_Katoh:45.1_Hiesh:1_Takasaki:-6.4_ThermoComp21:0.69_Thermo19:0.69_Gwhole:-46.4_MysiRNA:65.656 AntiSense: UAGGUGGGGGGCAUCUGGAgu Sense: UCCAGAUGCCCCCCACCUA >siRNAnum:664_iscore:58.7_SBiopredsi:0.716_DISR:75.9_reynold:5_UiTie:II_Amarzguioui:3_Katoh:53.7_Hiesh:-1_Takasaki:0.0_ThermoComp21:0.70_Thermo19:0.74_Gwhole:-47.2_MysiRNA:65.098 AntiSense: UGGACUGCUAGGUGGGGGGca Sense: CCCCCCACCUAGCAGUCCA >siRNAnum:674_iscore:63.6_SBiopredsi:0.807_DISR:89.4_reynold:5_UiTie:II_Amarzguioui:2_Katoh:45.9_Hiesh:1_Takasaki:-4.0_ThermoComp21:0.82_Thermo19:0.81_Gwhole:-43.8_MysiRNA:80.071 AntiSense: UUGAGGGACCUGGACUGCUag Sense: AGCAGUCCAGGUCCCUCAA >siRNAnum:686_iscore:53.7_SBiopredsi:0.567_DISR:65.5_reynold:5_UiTie:II_Amarzguioui:4_Katoh:69.1_Hiesh:1_Takasaki:2.3_ThermoComp21:0.65_Thermo19:0.70_Gwhole:-38.7_MysiRNA:74.97 AntiSense: GUUUGGUGAAGGUUGAGGGac Sense: CCCUCAACCUUCACCAAAC >siRNAnum:694_iscore:50.6_SBiopredsi:0.608_DISR:73.4_reynold:5_UiTie:II_Amarzguioui:1_Katoh:53.7_Hiesh:0_Takasaki:3.0_ThermoComp21:0.73_Thermo19:0.75_Gwhole:-37.7_MysiRNA:78.506 AntiSense: UGGGUAGUGUUUGGUGAAGgu Sense: CUUCACCAAACACUACCCA >siRNAnum:729_iscore:52.6_SBiopredsi:0.640_DISR:69.9_reynold:5_UiTie:II_Amarzguioui:2_Katoh:52.1_Hiesh:1_Takasaki:-4.0_ThermoComp21:0.70_Thermo19:0.72_Gwhole:-40.2_MysiRNA:76.333 AntiSense: AGUGUUAGUUUGGCCGGCUga Sense: AGCCGGCCAAACUAACACU >siRNAnum:865_iscore:48.5_SBiopredsi:0.639_DISR:71.2_reynold:5_UiTie:II_Amarzguioui:-1_Katoh:61.9_Hiesh:0_Takasaki:-3.3_ThermoComp21:0.68_Thermo19:0.68_Gwhole:-37.0_MysiRNA:73.086 AntiSense: UCUUGGUAUGGUAGCCAAAgg Sense: UUUGGCUACCAUACCAAGA >siRNAnum:971_iscore:63.3_SBiopredsi:0.808_DISR:74.7_reynold:9_UiTie:II_Amarzguioui:1_Katoh:84.8_Hiesh:0_Takasaki:-6.1_ThermoComp21:0.91_Thermo19:0.92_Gwhole:-30.7_MysiRNA:90.153 AntiSense: UUUUUUUUUAUCGGGGCAAgg Sense: UUGCCCCGAUAAAAAAAAA