Determinants of the DNA Binding Specificity of Class I and Class II TCP Transcription Factors

Supplemental Data

Files in this Data Supplement:

• Supplemental Figure 5 (.pdf, 65 KB) - Protein sequence alignment of class I and class II TCP domains
• Supplemental Figure 1 (.pdf, 101 KB) - TCP domain sequences of Arabidopsis class I TCP proteins
• Supplemental Figure 3 (.pdf, 150 KB) - The sequences of 64 clones obtained after 3 rounds of selection with TCP16
• Supplemental Table 2 (.pdf, 109 KB) - Gene names and identifiers of selected sequences used in the phylogenetic analysis
• Supplemental Figure 6 (.pdf, 273 KB) - Rooted Maximum Likelihood tree of TCP genes in Land Plants showing the evolution of the second position of codon 11 of the class I TCP domain or the equivalent codon 15 of the class II domain
• Supplemental Figure 2 (.pdf, 43 KB) - Binding of TCP16 to an oligonucleotide constructed on the basis of the consensus target sites of class I and class II proteins and variants with single or double changes at defined positions
• Supplemental Table 3 (.pdf, 54 KB) - Selection analysis of the TCP domain
• Supplemental Table 1 (.pdf, 60 KB) - List of oligonucleotides used
• Supplemental Figure 4 (.pdf, 129 KB) - Hydroxyl radical footprinting patterns of the complexes of TCP16, TCP4 and TCP20 with an oligonucleotide containing the sequence GTGGGCCCGG