Supplemental table 5: expression of 59 Early Light Responsive Genes (ELRGs) in both mating types of Neurospora crassa.															


ID	a36	a60	a96	a96/a36	A36	A60	A96	A96/A36	P(a|36>a|60)	P(a|36>a|96)	P(a|60>a|96)	P(A|36>A|60)	P(A|36>A|96)	P(A|60>A|96)	
NCU04452	2.40785	1.51396	1.92576	0.79978404	2.32823	1.8053	1	0.42951083	0.9384	0.7617	0.2384	0.7862	0.9933	0.9189	MIPS:probable NADPH2 dehydrogenase chain OYE2 BROAD:hypothetical protein
NCU02190	1.94337	1.22858	1.07123	0.551222876	1.93475	1.3164	1	0.516862644	0.9999	1	0.9369	0.9968	1	0.9833	MIPS:related to KES1 protein BROAD:hypothetical protein
NCU00244	1.95124	1.44666	1	0.512494619	2.00978	1.42333	1.08011	0.537426982	0.9926	0.9999	0.9918	0.9966	0.9998	0.9849	MIPS:related to galactinol synthase BROAD:hypothetical protein
NCU02691	1.69916	1.36429	1.24058	0.730113703	1.71693	1.40552	1	0.582434927	0.9311	0.9639	0.7219	0.9157	0.9984	0.9793	MIPS:hypothetical protein BROAD:predicted protein
NCU06915	1.36584	1.3114	1.1782	0.86261934	1.60771	1.40891	1	0.622002724	0.5818	0.7691	0.7225	0.7188	0.9818	0.9461	MIPS:hypothetical protein BROAD:predicted protein
NCU04274	1.32797	1.08436	1	0.753029059	1.48126	1.06632	1.01066	0.682297503	0.9815	0.9902	0.7933	0.997	0.9916	0.6908	MIPS:related to Sts1 protein BROAD:hypothetical protein ( (AL513462) related to
NCU07585	2.44737	2.07506	1	0.408601887	1.65463	2.19251	1.16788	0.705825472	0.8981	1	0.9993	0.0324	0.9834	0.9959	MIPS:related to siroheme synthase BROAD:hypothetical protein
NCU07541	1.64146	1.51005	1	0.609213749	1.58496	1.2403	1.15398	0.728081466	0.6744	0.9816	0.9692	0.8938	0.8915	0.6493	MIPS:hypothetical protein BROAD:predicted protein
NCU00552	1.19368	1.18456	1	0.837745459	1.41662	1.27752	1.04409	0.737028984	0.5323	0.923	0.9259	0.8025	0.989	0.9402	MIPS:phytoene dehydrogenase AL-1 (carotenoid biosynthesis protein al-1) BROAD:P
NCU01844	2.37558	1.70098	1	0.420949831	2.45725	1.63796	1.91632	0.779863669	0.7793	0.9538	0.9255	0.8011	0.7168	0.3757	MIPS:conserved hypothetical protein BROAD:predicted protein
NCU05007	1.23816	1.06112	1.03595	0.836685081	1.24728	1.20381	1	0.801744596	0.9087	0.8985	0.5683	0.6265	0.9677	0.9171	MIPS:conserved hypothetical protein BROAD:hypothetical protein
NCU00276	1.22507	1.17554	1.02163	0.83393602	1.21959	1.17593	1	0.819947687	0.7447	0.9805	0.951	0.7204	0.9863	0.968	MIPS:DNA polymerase gamma BROAD:DNA POLYMERASE GAMMA (MITOCHONDRIAL DNA POLYMER
NCU09535	1.03313	1.17891	1.24611	1.206150242	1.31209	1	1.08178	0.824470882	0.1191	0.0899	0.3446	0.9843	0.952	0.2535	MIPS:conserved hypothetical protein BROAD:hypothetical protein
NCU02888	1.81717	1.22623	1	0.550306245	1.48939	1.17291	1.24068	0.833012173	0.9479	0.9798	0.8134	0.8159	0.7525	0.4113	MIPS:conserved hypothetical protein BROAD:hypothetical protein
NCU00360	1.21712	1.41468	1.19309	0.980256671	1.17933	1.38771	1	0.847939084	0.1132	0.5631	0.9219	0.0897	0.912	0.9915	MIPS:conserved hypothetical protein BROAD:hypothetical protein
NCU08280	1.14616	1.20928	1.26465	1.103379982	1.09141	1.43956	1	0.916245957	0.3091	0.2095	0.3317	0.0102	0.7839	0.9977	MIPS:related to squalene monooxygenase BROAD:hypothetical protein
NCU01089	1.22801	1.23973	1.21792	0.991783455	1.07192	1.18086	1	0.932905441	0.475	0.526	0.5483	0.2522	0.7071	0.866	MIPS:hypothetical protein BROAD:predicted protein
NCU00584	1.07129	1.24925	1.39644	1.303512588	1.00913	1.44791	1	0.990952603	0.1172	0.0368	0.1664	0.0045	0.5371	0.9933	MIPS:conserved hypothetical protein BROAD:predicted protein
NCU02264	1.43029	1.01591	1.02966	0.719895965	1.0064	1.16826	1	0.9936407	0.995	0.9914	0.4407	0.1451	0.5034	0.7918	MIPS:related to prefoldin subunit 3 BROAD:hypothetical protein
NCU08291	1.24771	1.16681	1.01961	0.817185083	1.00053	1.1092	1	0.999470281	0.6313	0.8456	0.7309	0.3033	0.5235	0.6921	MIPS:probable ferrochelatase BROAD:hypothetical protein
NCU07159	2.05851	1.50958	1	0.485788264	1.92467	1.69393	2.01856	1.048782389	0.8834	0.989	0.8869	0.688	0.4391	0.2403	MIPS:probable endopeptidase K BROAD:hypothetical protein
NCU08850	1	1.0644	1.08055	1.08055	1.09651	1.10157	1.17379	1.070478153	0.3229	0.3072	0.4545	0.4847	0.3129	0.324	MIPS:UV-endonuclease UVE-1 BROAD:hypothetical protein ( (D11392) UV-endonucleas
NCU08699	1.0788	1.11316	1.21435	1.125648869	1	1.34471	1.08996	1.08996	0.4002	0.2057	0.22	0.0539	0.319	0.9271	MIPS:alcohol dehydrogenase homolog Bli-4 BROAD:PUTATIVE OXIDOREDUCTASE BLI-4 PR
NCU07264	1	1.08381	1.15704	1.15704	1.01731	1.04703	1.12295	1.103842487	0.1931	0.1039	0.2901	0.3867	0.149	0.2589	MIPS:probable ubiquitin-conjugating enzyme E2 BROAD:hypothetical protein
NCU01243	1.11317	1.24036	1.08226	0.972232453	1	1.24044	1.11769	1.11769	0.068	0.6005	0.921	0.0056	0.0617	0.902	MIPS:conserved hypothetical protein BROAD:hypothetical protein
NCU03602	1.39901	1.58541	1.11764	0.798879207	1	1.48083	1.14981	1.14981	0.4022	0.6612	0.8184	0.1665	0.3061	0.7304	MIPS:conserved hypothetical protein BROAD:hypothetical protein
NCU02801	1.17823	1.24465	1.12335	0.953421658	1	1.39149	1.15695	1.15695	0.3022	0.6593	0.8366	0.0056	0.1132	0.9141	"MIPS:related to benzodiazepine receptor, peripheral-type BROAD:hypothetical pro"
NCU01422	1.43144	1.04461	1.11013	0.775533728	1	1.15419	1.1777	1.1777	0.9968	0.9857	0.2783	0.1275	0.092	0.4331	MIPS:probable multiprotein bridging factor MBF1 BROAD:hypothetical protein
NCU06554	1	1.1509	1.0912	1.0912	1.06222	1.15923	1.25973	1.185940766	0.1526	0.267	0.6545	0.2774	0.1456	0.3292	MIPS:conserved hypothetical protein BROAD:hypothetical protein ( (AF309689) put
NCU04295	1.09181	1.31039	1.20184	1.100777608	1	1.14658	1.1941	1.1941	0.0721	0.3088	0.702	0.1243	0.0787	0.3747	MIPS:conserved hypothetical protein BROAD:hypothetical protein ( (AL451109) con
NCU05785	1	1.07586	1.07692	1.07692	1.23314	1.41411	1.47323	1.194698088	0.372	0.3974	0.5035	0.2775	0.2074	0.4497	MIPS:probable calcium-related spray protein BROAD:hypothetical protein
NCU03072	1.11429	1.2439	1.19861	1.075671504	1	1.17796	1.20949	1.20949	0.1406	0.3222	0.6048	0.0558	0.0394	0.3999	MIPS:hypothetical protein BROAD:predicted protein
NCU03312	1	1.11285	1.41781	1.41781	1.00146	1.17336	1.22665	1.224861702	0.0704	0.0008	0.0085	0.0293	0.0096	0.3396	MIPS:conserved hypothetical protein BROAD:hypothetical protein
NCU06420	1.08663	1.03983	1.31784	1.212777118	1	1.36729	1.24339	1.24339	0.6604	0.0597	0.0219	0.0081	0.045	0.7638	MIPS:putative protein BROAD:predicted protein
NCU07434	1.16191	1.17409	1	0.860651858	1.26931	1.22634	1.6308	1.284792525	0.4631	0.8676	0.8827	0.5879	0.0377	0.0313	MIPS:related to short chain dehydrogenase BROAD:hypothetical protein
NCU01895	1.02641	1.24241	1.38325	1.347658343	1	1.22464	1.28737	1.28737	0.1449	0.0477	0.267	0.1019	0.0582	0.4004	MIPS:related to response regulator Mcs4 BROAD:hypothetical protein
NCU07296	1.22415	1.3666	1.547	1.26373402	1	1.40947	1.29475	1.29475	0.2595	0.1064	0.2663	0.0407	0.0936	0.6639	MIPS:serine/threonine protein kinase COT-1 BROAD:hypothetical protein
NCU00553	1.21958	1.3004	1.34802	1.105314944	1	1.26003	1.30793	1.30793	0.2097	0.2081	0.3694	0.0093	0.0066	0.3552	MIPS:related to GTPase-activating protein beta-chimerin BROAD:hypothetical prot
NCU09937	1.0548	1.35919	1.47194	1.395468335	1	1.32231	1.31131	1.31131	0.0464	0.0145	0.2697	0.0453	0.0431	0.525	MIPS:conserved hypothetical protein BROAD:hypothetical protein ( hypothetical p
NCU03188	1.04054	1.22801	1	0.96103946	1.00819	1.18992	1.3946	1.38327101	0.1058	0.6259	0.9554	0.1015	0.0098	0.1111	"MIPS:related to D-arabinono-1,4-lactone oxidase BROAD:hypothetical protein"
NCU09079	1	1.29252	1.30522	1.30522	1.10811	1.45469	1.53682	1.386883974	0.1078	0.1242	0.488	0.0848	0.0519	0.3836	MIPS:conserved hypothetical protein BROAD:hypothetical protein
NCU00549	1.09667	1.2223	1.2146	1.107534628	1	1.1304	1.4033	1.4033	0.2039	0.2423	0.5188	0.1809	0.0121	0.0717	MIPS:related to glutathione transferase omega 1 BROAD:hypothetical protein
NCU01997	1.65814	1.87646	1.92385	1.160245818	1	1.96664	1.51043	1.51043	0.2462	0.2604	0.4306	0.0035	0.019	0.9049	MIPS:conserved hypothetical protein BROAD:hypothetical protein
NCU02945	1	1.48252	1.75698	1.75698	1.00987	1.50958	1.55848	1.543248141	0.0039	0.0034	0.134	0.0058	0.0045	0.4268	MIPS:hypothetical protein BROAD:predicted protein
NCU07024	1.06275	1.34933	1.47475	1.387673489	1	1.2924	1.55614	1.55614	0.021	0.011	0.1964	0.0163	0.0008	0.0457	MIPS:osmotic sensitive-2 protein (putative mitogen-activated protein (MAP) kinas
NCU01797	1.21709	1.02478	1.1813	0.970593793	1.06225	1	1.66703	1.569338668	0.8666	0.5797	0.2005	0.6603	0.0128	0.008	MIPS:serine/threonine protein kinase NRC-2 BROAD:hypothetical protein
NCU03151	1.21572	1.37038	1.54604	1.271707301	1	1.3907	1.67658	1.67658	0.174	0.0573	0.1956	0.0205	0.0023	0.1359	MIPS:probable peroxisomal membrane protein BROAD:hypothetical protein
NCU08290	1.12188	1.25582	1.48339	1.32223589	1	1.23956	1.74881	1.74881	0.2752	0.1156	0.2484	0.1311	0.0094	0.0812	"MIPS:related to ATP-dependent DNA helicase II, 70 kDa subunit BROAD:hypothetica"
NCU02191	1.17053	2.08592	2.15498	1.841029277	1	2.10582	1.82628	1.82628	0.0066	0.0144	0.4154	0.0007	0.0012	0.8722	MIPS:conserved hypothetical protein BROAD:hypothetical protein
NCU07962	1	1.61194	1.62674	1.62674	1.00742	1.83676	1.85199	1.838349447	0.0005	0.0016	0.4724	0.0001	0.0002	0.4753	MIPS:putative protein BROAD:predicted protein
NCU07325	1	1.71397	1.88263	1.88263	1.23753	1.68749	2.28174	1.843785605	0.0003	0	0.1998	0.0098	0	0.0128	MIPS:conidation-specific protein CON-10 BROAD:hypothetical protein
NCU00720	2.00277	1.43554	1.59263	0.795213629	1	1.00558	1.96126	1.96126	0.9185	0.8625	0.3383	0.509	0.1204	0.1456	MIPS:probable L-lactate dehydrogenase BROAD:hypothetical protein
NCU06203	1.10404	1.53785	1.73355	1.570187674	1	1.55155	1.99602	1.99602	0.1365	0.0935	0.338	0.06	0.0102	0.2372	MIPS:putative protein BROAD:predicted protein
NCU09534	2.13101	1.07231	2.29387	1.076423855	1	1.21241	2.01384	2.01384	0.9836	0.2775	0.0059	0.2115	0.0017	0.0511	MIPS:probable glutathione peroxidase BROAD:hypothetical protein
NCU00326	1.66739	2.23113	2.38589	1.430912984	1	2.12441	2.24462	2.24462	0.042	0.0224	0.3204	0.0008	0.0004	0.3688	MIPS:related to senescence marker protein 30 BROAD:hypothetical protein
NCU02948	1.62864	1.51057	1.4729	0.904374202	1	1.58427	2.34125	2.34125	0.6129	0.6604	0.5354	0.0341	0.0014	0.0849	"MIPS:probable 1,4-Benzoquinone reductase BROAD:hypothetical protein"
NCU01258	1.76806	2.23828	3.31984	1.877673835	1	2.70356	2.69491	2.69491	0.1311	0.0081	0.0565	0.0002	0.0004	0.5105	MIPS:probable cyanate lyase BROAD:hypothetical protein
NCU06603	1.30198	3.0524	3.47283	2.667345121	1	2.26311	3.09036	3.09036	0.0009	0.0007	0.2494	0.0006	0.0001	0.07	"MIPS:related to NonF protein, involved in nonactin biosynthesis BROAD:hypotheti"
NCU02887	1.2189	1.98418	2.13631	1.752654032	1	1.7084	3.10912	3.10912	0.0236	0.02	0.4022	0.0152	0	0.0229	MIPS:probable potassium channel beta subunit protein BROAD:hypothetical protein