#dataset correctlyAlignedReads wronglyAlignedReads foundReads foundButWrong cpuTime method A 771398 239 884733 5 663.91 last (trimEnd q=3) score=150 mismap=0.00001 A 787954 325 884733 11 663.91 last (trimEnd q=3) score=150 mismap=0.0001 A 800513 514 884733 17 663.91 last (trimEnd q=3) score=150 mismap=0.001 A 816918 1185 884733 140 663.91 last (trimEnd q=3) score=150 mismap=0.01 A 832373 3708 884733 495 663.91 last (trimEnd q=3) score=150 mismap=0.1 A 760940 207 884733 5 663.91 last (trimEnd q=3) score=180 mismap=0.00001 A 776903 290 884733 11 663.91 last (trimEnd q=3) score=180 mismap=0.0001 A 788752 463 884733 17 663.91 last (trimEnd q=3) score=180 mismap=0.001 A 804414 1105 884733 140 663.91 last (trimEnd q=3) score=180 mismap=0.01 A 819223 3503 884733 483 663.91 last (trimEnd q=3) score=180 mismap=0.1 A 774334 231 888775 2 2031.25 last gapped score=150 mismap=0.00001 A 791361 319 888775 5 2031.25 last gapped score=150 mismap=0.0001 A 804584 520 888775 7 2031.25 last gapped score=150 mismap=0.001 A 821399 1249 888775 125 2031.25 last gapped score=150 mismap=0.01 A 836985 4253 888775 477 2031.25 last gapped score=150 mismap=0.1 A 763823 201 888775 2 2031.25 last gapped score=180 mismap=0.00001 A 780213 288 888775 5 2031.25 last gapped score=180 mismap=0.0001 A 792636 471 888775 7 2031.25 last gapped score=180 mismap=0.001 A 808720 1158 888775 124 2031.25 last gapped score=180 mismap=0.01 A 823645 3937 888775 464 2031.25 last gapped score=180 mismap=0.1 A 775686 260 888774 5 710.56 last m=10 score=150 mismap=0.00001 A 792373 360 888774 12 710.56 last m=10 score=150 mismap=0.0001 A 805070 578 888774 18 710.56 last m=10 score=150 mismap=0.001 A 821392 1322 888774 141 710.56 last m=10 score=150 mismap=0.01 A 836907 4352 888774 507 710.56 last m=10 score=150 mismap=0.1 A 765165 231 888774 5 710.56 last m=10 score=180 mismap=0.00001 A 781208 329 888774 12 710.56 last m=10 score=180 mismap=0.0001 A 793106 530 888774 18 710.56 last m=10 score=180 mismap=0.001 A 808700 1234 888774 140 710.56 last m=10 score=180 mismap=0.01 A 823553 4043 888774 493 710.56 last m=10 score=180 mismap=0.1 A 774173 121 893943 5 977.26 last m=20 score=150 mismap=0.00001 A 790684 170 893943 9 977.26 last m=20 score=150 mismap=0.0001 A 803919 278 893943 16 977.26 last m=20 score=150 mismap=0.001 A 820242 745 893943 135 977.26 last m=20 score=150 mismap=0.01 A 836522 2806 893943 498 977.26 last m=20 score=150 mismap=0.1 A 763643 103 893943 5 977.26 last m=20 score=180 mismap=0.00001 A 779497 150 893943 9 977.26 last m=20 score=180 mismap=0.0001 A 791916 254 893943 16 977.26 last m=20 score=180 mismap=0.001 A 807487 694 893943 135 977.26 last m=20 score=180 mismap=0.01 A 823089 2616 893943 486 977.26 last m=20 score=180 mismap=0.1 A 771922 20 905673 4 4983.98 last m=200 score=150 mismap=0.00001 A 788217 29 905673 9 4983.98 last m=200 score=150 mismap=0.0001 A 802071 48 905673 14 4983.98 last m=200 score=150 mismap=0.001 A 818638 220 905673 131 4983.98 last m=200 score=150 mismap=0.01 A 835249 905 905673 457 4983.98 last m=200 score=150 mismap=0.1 A 761315 16 905673 4 4983.98 last m=200 score=180 mismap=0.00001 A 776912 25 905673 9 4983.98 last m=200 score=180 mismap=0.0001 A 789915 44 905673 14 4983.98 last m=200 score=180 mismap=0.001 A 805687 212 905673 131 4983.98 last m=200 score=180 mismap=0.01 A 821605 870 905673 445 4983.98 last m=200 score=180 mismap=0.1 A 772905 51 899292 4 1580.75 last m=50 score=150 mismap=0.00001 A 789293 78 899292 9 1580.75 last m=50 score=150 mismap=0.0001 A 802893 126 899292 14 1580.75 last m=50 score=150 mismap=0.001 A 819329 401 899292 131 1580.75 last m=50 score=150 mismap=0.01 A 835842 1666 899292 487 1580.75 last m=50 score=150 mismap=0.1 A 762312 40 899292 4 1580.75 last m=50 score=180 mismap=0.00001 A 778035 66 899292 9 1580.75 last m=50 score=180 mismap=0.0001 A 790799 112 899292 14 1580.75 last m=50 score=180 mismap=0.001 A 806465 379 899292 131 1580.75 last m=50 score=180 mismap=0.01 A 822286 1581 899292 474 1580.75 last m=50 score=180 mismap=0.1 A 789955 329 888588 11 740.87 last mismatchCost=30 y=150 score=150 mismap=0.00001 A 800379 475 888588 15 740.87 last mismatchCost=30 y=150 score=150 mismap=0.0001 A 814265 914 888588 89 740.87 last mismatchCost=30 y=150 score=150 mismap=0.001 A 828856 2243 888588 259 740.87 last mismatchCost=30 y=150 score=150 mismap=0.01 A 837474 5178 888588 632 740.87 last mismatchCost=30 y=150 score=150 mismap=0.1 A 779023 299 888588 11 740.87 last mismatchCost=30 y=150 score=180 mismap=0.00001 A 788830 441 888588 15 740.87 last mismatchCost=30 y=150 score=180 mismap=0.0001 A 801963 866 888588 89 740.87 last mismatchCost=30 y=150 score=180 mismap=0.001 A 815870 2119 888588 257 740.87 last mismatchCost=30 y=150 score=180 mismap=0.01 A 823906 4840 888588 616 740.87 last mismatchCost=30 y=150 score=180 mismap=0.1 A 775045 259 888329 5 743.22 last scaled score=1500 mismap=0.00001 A 791618 360 888329 13 743.22 last scaled score=1500 mismap=0.0001 A 804419 574 888329 18 743.22 last scaled score=1500 mismap=0.001 A 820914 1324 888329 145 743.22 last scaled score=1500 mismap=0.01 A 836186 4262 888329 501 743.22 last scaled score=1500 mismap=0.1 A 764232 230 888329 5 743.22 last scaled score=1800 mismap=0.00001 A 780214 329 888329 13 743.22 last scaled score=1800 mismap=0.0001 A 792271 529 888329 18 743.22 last scaled score=1800 mismap=0.001 A 808061 1238 888329 144 743.22 last scaled score=1800 mismap=0.01 A 822678 3973 888329 486 743.22 last scaled score=1800 mismap=0.1 A 777907 814 876644 6 640.35 last seed=1 score=150 mismap=0.00001 A 793459 1169 876644 11 640.35 last seed=1 score=150 mismap=0.0001 A 803768 1760 876644 16 640.35 last seed=1 score=150 mismap=0.001 A 818478 3525 876644 148 640.35 last seed=1 score=150 mismap=0.01 A 830365 8400 876644 450 640.35 last seed=1 score=150 mismap=0.1 A 767848 707 876644 6 640.35 last seed=1 score=180 mismap=0.00001 A 782912 1057 876644 11 640.35 last seed=1 score=180 mismap=0.0001 A 792583 1599 876644 16 640.35 last seed=1 score=180 mismap=0.001 A 806663 3238 876644 147 640.35 last seed=1 score=180 mismap=0.01 A 818053 7679 876644 438 640.35 last seed=1 score=180 mismap=0.1 A 775885 235 888317 4 790.67 last seed=1111101110010 score=150 mismap=0.00001 A 793044 313 888317 8 790.67 last seed=1111101110010 score=150 mismap=0.0001 A 806202 489 888317 14 790.67 last seed=1111101110010 score=150 mismap=0.001 A 823103 1200 888317 135 790.67 last seed=1111101110010 score=150 mismap=0.01 A 838430 4279 888317 512 790.67 last seed=1111101110010 score=150 mismap=0.1 A 764953 207 888317 4 790.67 last seed=1111101110010 score=180 mismap=0.00001 A 781560 283 888317 8 790.67 last seed=1111101110010 score=180 mismap=0.0001 A 794001 450 888317 14 790.67 last seed=1111101110010 score=180 mismap=0.001 A 810183 1127 888317 135 790.67 last seed=1111101110010 score=180 mismap=0.01 A 824857 4009 888317 501 790.67 last seed=1111101110010 score=180 mismap=0.1 A 775940 236 888390 5 715.19 last seed=1111110101100 score=150 mismap=0.00001 A 793067 336 888390 9 715.19 last seed=1111110101100 score=150 mismap=0.0001 A 806313 517 888390 16 715.19 last seed=1111110101100 score=150 mismap=0.001 A 823209 1236 888390 143 715.19 last seed=1111110101100 score=150 mismap=0.01 A 838537 4261 888390 506 715.19 last seed=1111110101100 score=150 mismap=0.1 A 765034 202 888390 5 715.19 last seed=1111110101100 score=180 mismap=0.00001 A 781621 297 888390 9 715.19 last seed=1111110101100 score=180 mismap=0.0001 A 794122 467 888390 16 715.19 last seed=1111110101100 score=180 mismap=0.001 A 810291 1155 888390 142 715.19 last seed=1111110101100 score=180 mismap=0.01 A 824966 3985 888390 494 715.19 last seed=1111110101100 score=180 mismap=0.1 A 775700 270 888261 5 693.64 last seed=111111111110 score=150 mismap=0.00001 A 792342 389 888261 10 693.64 last seed=111111111110 score=150 mismap=0.0001 A 804828 606 888261 17 693.64 last seed=111111111110 score=150 mismap=0.001 A 821125 1391 888261 140 693.64 last seed=111111111110 score=150 mismap=0.01 A 836565 4458 888261 501 693.64 last seed=111111111110 score=150 mismap=0.1 A 765182 237 888261 5 693.64 last seed=111111111110 score=180 mismap=0.00001 A 781205 353 888261 10 693.64 last seed=111111111110 score=180 mismap=0.0001 A 792918 551 888261 17 693.64 last seed=111111111110 score=180 mismap=0.001 A 808498 1289 888261 139 693.64 last seed=111111111110 score=180 mismap=0.01 A 823283 4122 888261 486 693.64 last seed=111111111110 score=180 mismap=0.1 A 770160 265 889767 5 705.65 last unbiased score=150 mismap=0.00001 A 786677 353 889767 12 705.65 last unbiased score=150 mismap=0.0001 A 800122 518 889767 21 705.65 last unbiased score=150 mismap=0.001 A 816656 1137 889767 151 705.65 last unbiased score=150 mismap=0.01 A 833685 3562 889767 525 705.65 last unbiased score=150 mismap=0.1 A 760254 229 889767 5 705.65 last unbiased score=180 mismap=0.00001 A 776060 312 889767 12 705.65 last unbiased score=180 mismap=0.0001 A 788562 456 889767 19 705.65 last unbiased score=180 mismap=0.001 A 804244 1029 889767 149 705.65 last unbiased score=180 mismap=0.01 A 820585 3247 889767 501 705.65 last unbiased score=180 mismap=0.1 A 768278 262 886187 9 689.47 last without quality data score=150 mismap=0.00001 A 786505 406 886187 20 689.47 last without quality data score=150 mismap=0.0001 A 797916 607 886187 35 689.47 last without quality data score=150 mismap=0.001 A 816424 1724 886187 297 689.47 last without quality data score=150 mismap=0.01 A 830405 5770 886187 1058 689.47 last without quality data score=150 mismap=0.1 A 757481 232 886187 9 689.47 last without quality data score=180 mismap=0.00001 A 774480 374 886187 20 689.47 last without quality data score=180 mismap=0.0001 A 784538 564 886187 35 689.47 last without quality data score=180 mismap=0.001 A 801604 1599 886187 291 689.47 last without quality data score=180 mismap=0.01 A 814820 5313 886187 987 689.47 last without quality data score=180 mismap=0.1 B 841442 160 967242 7 684.96 last (trimEnd q=3) score=150 mismap=0.00001 B 861234 209 967242 11 684.96 last (trimEnd q=3) score=150 mismap=0.0001 B 875493 287 967242 13 684.96 last (trimEnd q=3) score=150 mismap=0.001 B 896542 672 967242 145 684.96 last (trimEnd q=3) score=150 mismap=0.01 B 915510 1878 967242 449 684.96 last (trimEnd q=3) score=150 mismap=0.1 B 838974 145 967242 7 684.96 last (trimEnd q=3) score=180 mismap=0.00001 B 858598 193 967242 11 684.96 last (trimEnd q=3) score=180 mismap=0.0001 B 872663 264 967242 13 684.96 last (trimEnd q=3) score=180 mismap=0.001 B 893493 641 967242 144 684.96 last (trimEnd q=3) score=180 mismap=0.01 B 912294 1827 967242 445 684.96 last (trimEnd q=3) score=180 mismap=0.1 B 843781 313 969906 2 1886.43 last gapped score=150 mismap=0.00001 B 863654 436 969906 6 1886.43 last gapped score=150 mismap=0.0001 B 878793 576 969906 8 1886.43 last gapped score=150 mismap=0.001 B 899749 1364 969906 138 1886.43 last gapped score=150 mismap=0.01 B 919108 4204 969906 449 1886.43 last gapped score=150 mismap=0.1 B 840511 289 969906 2 1886.43 last gapped score=180 mismap=0.00001 B 860202 411 969906 6 1886.43 last gapped score=180 mismap=0.0001 B 875120 544 969906 8 1886.43 last gapped score=180 mismap=0.001 B 895888 1313 969906 137 1886.43 last gapped score=180 mismap=0.01 B 915069 4091 969906 446 1886.43 last gapped score=180 mismap=0.1 B 845251 336 969904 7 768.62 last m=10 score=150 mismap=0.00001 B 864705 460 969904 11 768.62 last m=10 score=150 mismap=0.0001 B 879343 602 969904 13 768.62 last m=10 score=150 mismap=0.001 B 899745 1401 969904 150 768.62 last m=10 score=150 mismap=0.01 B 919003 4256 969904 473 768.62 last m=10 score=150 mismap=0.1 B 841971 310 969904 7 768.62 last m=10 score=180 mismap=0.00001 B 861244 432 969904 11 768.62 last m=10 score=180 mismap=0.0001 B 875651 566 969904 13 768.62 last m=10 score=180 mismap=0.001 B 895863 1345 969904 148 768.62 last m=10 score=180 mismap=0.01 B 914933 4141 969904 468 768.62 last m=10 score=180 mismap=0.1 B 843618 126 974568 6 912.58 last m=20 score=150 mismap=0.00001 B 862629 169 974568 11 912.58 last m=20 score=150 mismap=0.0001 B 877650 223 974568 13 912.58 last m=20 score=150 mismap=0.001 B 897621 643 974568 144 912.58 last m=20 score=150 mismap=0.01 B 917423 2517 974568 458 912.58 last m=20 score=150 mismap=0.1 B 840327 115 974568 6 912.58 last m=20 score=180 mismap=0.00001 B 859153 158 974568 11 912.58 last m=20 score=180 mismap=0.0001 B 873941 211 974568 13 912.58 last m=20 score=180 mismap=0.001 B 893723 621 974568 142 912.58 last m=20 score=180 mismap=0.01 B 913329 2457 974568 452 912.58 last m=20 score=180 mismap=0.1 B 841197 23 984421 6 4865.07 last m=200 score=150 mismap=0.00001 B 859775 30 984421 9 4865.07 last m=200 score=150 mismap=0.0001 B 875176 41 984421 12 4865.07 last m=200 score=150 mismap=0.001 B 894717 204 984421 138 4865.07 last m=200 score=150 mismap=0.01 B 913854 744 984421 398 4865.07 last m=200 score=150 mismap=0.1 B 837931 21 984421 6 4865.07 last m=200 score=180 mismap=0.00001 B 856305 28 984421 9 4865.07 last m=200 score=180 mismap=0.0001 B 871460 39 984421 12 4865.07 last m=200 score=180 mismap=0.001 B 890796 200 984421 137 4865.07 last m=200 score=180 mismap=0.01 B 909725 726 984421 391 4865.07 last m=200 score=180 mismap=0.1 B 842252 52 979278 6 1550.45 last m=50 score=150 mismap=0.00001 B 861020 66 979278 9 1550.45 last m=50 score=150 mismap=0.0001 B 876304 94 979278 12 1550.45 last m=50 score=150 mismap=0.001 B 896003 345 979278 140 1550.45 last m=50 score=150 mismap=0.01 B 915490 1404 979278 426 1550.45 last m=50 score=150 mismap=0.1 B 838977 49 979278 6 1550.45 last m=50 score=180 mismap=0.00001 B 857548 63 979278 9 1550.45 last m=50 score=180 mismap=0.0001 B 872587 91 979278 12 1550.45 last m=50 score=180 mismap=0.001 B 892091 338 979278 139 1550.45 last m=50 score=180 mismap=0.01 B 911370 1370 979278 419 1550.45 last m=50 score=180 mismap=0.1 B 864621 468 969864 8 737.15 last mismatchCost=30 y=150 score=150 mismap=0.00001 B 875803 578 969864 15 737.15 last mismatchCost=30 y=150 score=150 mismap=0.0001 B 894181 1215 969864 123 737.15 last mismatchCost=30 y=150 score=150 mismap=0.001 B 910809 2864 969864 281 737.15 last mismatchCost=30 y=150 score=150 mismap=0.01 B 919779 5130 969864 624 737.15 last mismatchCost=30 y=150 score=150 mismap=0.1 B 861191 445 969864 8 737.15 last mismatchCost=30 y=150 score=180 mismap=0.00001 B 872179 553 969864 15 737.15 last mismatchCost=30 y=150 score=180 mismap=0.0001 B 890327 1179 969864 123 737.15 last mismatchCost=30 y=150 score=180 mismap=0.001 B 906757 2801 969864 279 737.15 last mismatchCost=30 y=150 score=180 mismap=0.01 B 915574 5010 969864 619 737.15 last mismatchCost=30 y=150 score=180 mismap=0.1 B 844976 341 969849 7 766.15 last scaled score=1500 mismap=0.00001 B 864432 466 969849 11 766.15 last scaled score=1500 mismap=0.0001 B 879236 608 969849 13 766.15 last scaled score=1500 mismap=0.001 B 899761 1403 969849 150 766.15 last scaled score=1500 mismap=0.01 B 918895 4243 969849 465 766.15 last scaled score=1500 mismap=0.1 B 841694 313 969849 7 766.15 last scaled score=1800 mismap=0.00001 B 860991 437 969849 11 766.15 last scaled score=1800 mismap=0.0001 B 875554 570 969849 13 766.15 last scaled score=1800 mismap=0.001 B 895898 1345 969849 148 766.15 last scaled score=1800 mismap=0.01 B 914844 4125 969849 460 766.15 last scaled score=1800 mismap=0.1 B 851501 1036 968006 7 593.45 last seed=1 score=150 mismap=0.00001 B 870843 1409 968006 12 593.45 last seed=1 score=150 mismap=0.0001 B 883536 1769 968006 13 593.45 last seed=1 score=150 mismap=0.001 B 903149 3390 968006 154 593.45 last seed=1 score=150 mismap=0.01 B 918730 6840 968006 424 593.45 last seed=1 score=150 mismap=0.1 B 848180 950 968006 7 593.45 last seed=1 score=180 mismap=0.00001 B 867344 1315 968006 12 593.45 last seed=1 score=180 mismap=0.0001 B 879823 1659 968006 13 593.45 last seed=1 score=180 mismap=0.001 B 899248 3233 968006 153 593.45 last seed=1 score=180 mismap=0.01 B 914669 6594 968006 421 593.45 last seed=1 score=180 mismap=0.1 B 844533 226 965955 7 759.37 last seed=1111101110010 score=150 mismap=0.00001 B 864593 319 965955 11 759.37 last seed=1111101110010 score=150 mismap=0.0001 B 879519 458 965955 12 759.37 last seed=1111101110010 score=150 mismap=0.001 B 900632 1243 965955 145 759.37 last seed=1111101110010 score=150 mismap=0.01 B 919043 4543 965955 474 759.37 last seed=1111101110010 score=150 mismap=0.1 B 841709 207 965955 7 759.37 last seed=1111101110010 score=180 mismap=0.00001 B 861632 298 965955 11 759.37 last seed=1111101110010 score=180 mismap=0.0001 B 876388 430 965955 12 759.37 last seed=1111101110010 score=180 mismap=0.001 B 897330 1199 965955 144 759.37 last seed=1111101110010 score=180 mismap=0.01 B 915572 4440 965955 471 759.37 last seed=1111101110010 score=180 mismap=0.1 B 844557 233 965988 8 755.18 last seed=1111110101100 score=150 mismap=0.00001 B 864633 321 965988 12 755.18 last seed=1111110101100 score=150 mismap=0.0001 B 879592 458 965988 13 755.18 last seed=1111110101100 score=150 mismap=0.001 B 900585 1258 965988 145 755.18 last seed=1111110101100 score=150 mismap=0.01 B 919064 4556 965988 471 755.18 last seed=1111110101100 score=150 mismap=0.1 B 841706 217 965988 8 755.18 last seed=1111110101100 score=180 mismap=0.00001 B 861645 302 965988 12 755.18 last seed=1111110101100 score=180 mismap=0.0001 B 876421 430 965988 13 755.18 last seed=1111110101100 score=180 mismap=0.001 B 897243 1216 965988 145 755.18 last seed=1111110101100 score=180 mismap=0.01 B 915551 4450 965988 467 755.18 last seed=1111110101100 score=180 mismap=0.1 B 845321 325 970113 7 716.23 last seed=111111111110 score=150 mismap=0.00001 B 864708 440 970113 11 716.23 last seed=111111111110 score=150 mismap=0.0001 B 879228 576 970113 12 716.23 last seed=111111111110 score=150 mismap=0.001 B 899600 1357 970113 151 716.23 last seed=111111111110 score=150 mismap=0.01 B 918900 4174 970113 476 716.23 last seed=111111111110 score=150 mismap=0.1 B 842055 300 970113 7 716.23 last seed=111111111110 score=180 mismap=0.00001 B 861252 413 970113 11 716.23 last seed=111111111110 score=180 mismap=0.0001 B 875545 541 970113 12 716.23 last seed=111111111110 score=180 mismap=0.001 B 895722 1303 970113 149 716.23 last seed=111111111110 score=180 mismap=0.01 B 914840 4065 970113 470 716.23 last seed=111111111110 score=180 mismap=0.1 B 837204 310 969343 6 704.04 last unbiased score=150 mismap=0.00001 B 856230 429 969343 10 704.04 last unbiased score=150 mismap=0.0001 B 870962 535 969343 14 704.04 last unbiased score=150 mismap=0.001 B 891027 1126 969343 161 704.04 last unbiased score=150 mismap=0.01 B 912025 3329 969343 496 704.04 last unbiased score=150 mismap=0.1 B 834920 289 969343 6 704.04 last unbiased score=180 mismap=0.00001 B 853728 407 969343 10 704.04 last unbiased score=180 mismap=0.0001 B 868209 508 969343 14 704.04 last unbiased score=180 mismap=0.001 B 888037 1081 969343 159 704.04 last unbiased score=180 mismap=0.01 B 908874 3245 969343 487 704.04 last unbiased score=180 mismap=0.1 B 842626 346 968762 7 702.38 last without quality data score=150 mismap=0.00001 B 862715 469 968762 12 702.38 last without quality data score=150 mismap=0.0001 B 876185 618 968762 19 702.38 last without quality data score=150 mismap=0.001 B 897700 1577 968762 217 702.38 last without quality data score=150 mismap=0.01 B 915771 4739 968762 676 702.38 last without quality data score=150 mismap=0.1 B 840313 322 968762 7 702.38 last without quality data score=180 mismap=0.00001 B 860130 441 968762 12 702.38 last without quality data score=180 mismap=0.0001 B 873319 585 968762 19 702.38 last without quality data score=180 mismap=0.001 B 894527 1519 968762 215 702.38 last without quality data score=180 mismap=0.01 B 912419 4610 968762 662 702.38 last without quality data score=180 mismap=0.1