Seqeunce Name Notes Seq Length Sequence Preich var2csa 282 PCDRRTPPYGDNDQWKCDENLSKASEKPENICVPPRRQHMCINNLEKLNVEKIRNNHAFLADVLLTARNEGERIIQNHPDTNSSNVCVALERSFADLADIIRGTDQLKGTNKFEPYLKDMFKKIRGNDRIHQDKYPKNDQKHTKLREAWWNANRQKVWEVITCSARSNDLLIKRGWTQSKQSDSENKLELCRKCGHYEAKVPTQLDYVPQFLRWLTEWIEDFYREKQNLIDDMEKDCEECKTEGDKCKEGTSYSSTCKEKCTKYCECVKKWKSEWENQKNKY Preich_1.1 Small portion missing - 3 prime region 230 PCRNATGNDGKEIPRFSDKQQAEYDNKKTKCSYDSNGSKGKGGNSEGACAPYRRLSLCNKNLEYLNEYDSSKAKHYLLAKVCYAAKHEGESLKSYNDQYNLAYDGTASQICTVLARSFADIGDIVRGRDLYSGNKKKDKLQDNLKTIFGNIYNKLLDENKKNGEIKGRYGNDGDNYFKLREDWWTANRETVWKALTCDDRLGGNRYFRQTCGGDNESLSHASQKCRCRNN Preich_1.2 306 PCANRSDVRFSDTKGGECDNNKISGSNGGACAPYRRLHLCDHHLLHMEDNKIDNTHKLLLEVCLAAYYEGESIRQNHGQHKQINNDSQLCTELARSFADIGDIVRGRDLYIRNKKEKDRLQDNLKNIFKKIHDDVTKSDKKNGNELQERYQKDDDNYYQLREDWWDANRKEVWDAMTCDAVSGSNYFRHTCGGAKTNNNCRCSKDDKVPTYFDYVPQYLRWFEEWAEDFCRKKKKKVENLQKQCRGTYQGNDRYCSRNGYDCTKTKRAIGKLRYGNRCISCLYACNPYVDWIDNQRKQFLKQKEKY Preich_1 310 PCNHKSKERFSDTKGSECDDEKIEGNNKGTNGKEGACAPYRRLHLCDQHLEHINSDKITTHNLLADVCQAAQYEGRSIRGYYARYDEQYPSSVSTICTALARSFADIGDIIRGKDMYRRNKEEKTKLENKLKEYFKEIYEELIKKKEDAKNHYGDDPNYYKLREDWWYANRQKVWRAITCKDRGGAYFRATCGDKRNRTSTQSRCRCINFDVPTFFDYVPQFLRWFEEWAEDFCRKRKKKLQNAITKCRHDEKGNHKYCDLNGYDCKQTARGKNQLASDSDCNKCSVACKPFVEWLDKQKEEFNKQKNKY Preich_3 302 PCHGRVQERFSDARSSQCTYNRIKDSEHNDNSIGACAPYRRLHICDYNLENIDPEKITSTHNLLADVLLVAKHEGQTLVEKHEEHKRTNPDSKICTALARSFADIADIVRGRDLFLGNQQEKKKLEENLKKIFRKIHGGLTDAKERYGDDPNFYHLREDWWNENRDQVWKAITCNAGAADDYFKKSSSRVYSFSNGQCGNKQAKVPTDLDYVPQFLRWFDEWADDFCRIRNHKLKNIKKECRGDHDGDKYCSHNGYDCTKIIGNEEFFSWDSKCTGCSVKCRLYELWIGNQRKEFEKQNKKY Preich_4.2 Frameshift 308 PCKHKSGKRFSDTEGAHCSRKGIKGNNTGPGGACAPFRRLHLCDQHLSHMQDNKIINTHNLLLEVSLAAKYEGESLKKYHAQYQAENTDFKTNICTELARSFADIGDIVRGRDLYLGNSQEREQKEKLEKNLKEIFKKIYGSLKGREAKTQYNDPEGNFYQLREDWWALNRKDVWKALTCDAPAGAQYFRLTCSDGNSSAHNRCTCVDGDPPTFFDYVPQYLRWFEEWAEDFCRIKRRKLQKLEKECRGMGDGDKKLILPCTLRKILLEPRVALLWVMDVLSVSMEVPSYETWIDNQKQEFTTNNSHV Preich_4 335 PCGNVIGNGGTAKDDLKRFSKESGAECANNRIEGNIKNSKNKDFGACAPYRRLSLCNKNFQNMNIKDSSGKAKDNLLADVCMAAYYEGQSIKTHYPQYDAEYPVSGSNFTMCTMLARSFADIGDIIRGKDLYRGGGNKKRNQTERDKLEEKLKGVFGKIYGNLEKKDRYNGDKENFYQLREDWWTANRHTVWEAMTCNEDLKNSSYFRATCSDGKNQYQAHEKCRCEKKRGANADQVPTYFDYVPQYLRWFEEWAEDFCRKRKKKLENLDKQCRGEYEREKRYCSRNGYDCEETVRARGKLRMGKGCISCLYACNPYIDWINNQKEQFLKQRNKY Preich_5.2 297 PCLFSSSDRFPKEGEAECNGGIITGNKGGCGACAPYRRRHICDYNLHHINENNIKNTHDLLGNVLVMAKSEGESIVKSHEYTGNGIYKSGICISLARSFADIGDIIRGTDMFLGNNEIDIKEKNKLQSNLKKIFEKIVKNDRTLNNLPIGQVREYWWALNRNDVWNALTCSAPNDVHYFIKSSASKQSFSNSKCGHDENKVLTNLDYVPQFLRWFDEWAEDFCRKKKIKLENVEKACRNDSAKLYCSLNGYDCTKTIRNENILSDDTKCTGCLVKCNPYEIWLENQRNEFEKQKEKY Preich_5 308 PCEGRQSVRFSNEYGGQCTDTKIRGNDNNNNGGACAPLRRLFLCDQNLEHIKPDKITNTHNLLVDVLLAAKYEGQSIQKEYTQKGGDYKSGLCTALARSFADIGDIIRGKDLFIGYNEKDKTQKDKLQQNLKQYFEKIHEGLIDPRAKVYYNDTEKNFYQLRSDWWNANRNEVWKAIICGAPDNAEYFEKSDGGQYHTYTHCRYAGGDVLTNFDYVPQYLRWFEEWAEEFCRKKKKKVEILEQQCRGVNYNGEPKYCSLNGYDCEKTIYKKGELVMGNGCNNCLVACSHYKRWLANQKQEFLKQKKKC Preich_6.2 Frameshift 287 PCLLRDKERFSKENEAECNGSRISGNRGGCGACASYRRRHMCDYNLEYINEKNVLTTHDLLGNVLVMAKSEGDSIVKSHENTDNGIYKSGICISLARSFADIGDIVRGKDLYLGKNESEKKTKEKLQGNLEKIFEKIKTSNTNTKTLPLEKVREYWWALNRNDVWNAITCSASEDDHYFMQLQKSTQLFSNSCGHNKRSVPTNLDYVPQFFTGSTKWAEKIFVEIKIKNKLKKACRGGKMIRNCGWWYGLPKQILNNGFFFGKFKMVQGLAKIRCKGLYKNGNRKKK Preich_7.2 304 PCGNRSKVRFSDKYGGQCTDTKIHGNDPKNGGACAPLRRLFLCDHHLSHMNHEKIDTTHNLLLEVSLAAKYEGKSIIENYPQDRNNKEGICIALARSFADIGDIIRGKDLFRGYNEKDKVQKEKLEKNLKDIFAKIYGGLEKSARDHYQNDAPDFFQLREDWWNANRYDVWKAIICSAPNDAKYTKIGADGSTKASSMGQCRGVTAVPTNFDYVPQYLRWFHEWAEDFCRKRKKQLENAKKDCRGTSGKDRYCSRNGYDCVETIRAERKLVSDNDCNKCSFSCTPFVEWIDNQKLEFNKQKKKY Preich_7 310 PCEKRSSVRFSYTEGAECDRNKIKGNKDNKDKGGKNEGACAPLRRLSLCDYNLENVNNYEKIDNHTLLTDVCLAAQFEGESLTRYRDKYQKKYNDSSSQICTMLARSFADIGDIIRGKDLYLGDKEEKTKLQNKLKKIFDKIKKSDTKLTSLKDEEIREYWWEANRETVWKAITCDAAGGTYFRGTCGDNEKTGTKAKNKCRCNAPYADQVPTFFDYVPQYLRWFEEWAEEFCRLKKHKLKDVKTNCRERNKDGEERYCDRDGFDCERTKYKIRYFVMGKSCNTCSVSCRPYESWIGNQKQEFLKQKEKY Preich_8.2_var1csa? "Frameshift, 1 var1csa paralog" 214 SNHPYKGSSEVCIALARSFADIGDIIRGRDMFLGNNKEKEKIEKSLQNIFQNIQKNNSALKKLTDKQIREYWWAIHRKEVWKAITCNAPYDANYFRKTSDSTMDFTSEGQCGHDENKVLTNLDYVPQFLRWFDEWAEDFCRIRKYKLEKVKEACRNDSEKLYCSHNGYDCTKTIRNENILSDDPKCTGCLVKCSLYDSWLRNQRNEFEKQKEKY Preich_8 315 PCKGKPEVRFSKERITEYDNKKTKCSYDSNSKSEGVCAPYRRLHLCDHNLENINRYDKIDNHTLLADVCMAAKFEGESLTHYREQYLKIYPSSHYEICTDLARSFADIGDIVRGKDLFRGNKKKDKRDKLENNLIKSFEKIYNDVTKNRELKKRYEGDPDNNYSKLREDWWEENREKVWTALTCGAPKEAKYFRATCGDNEKTASQAGHQCRCIDFNVPTFFDYVPQYLRWFEEWAEDFCRKRKHKLENAKKQCRKPNNEEKYCDLKGFDCQRTKYKIGYFVEDTDCKKCSVACDNFVNWIEDQKKEFLKQRKKY Preich_9.1 309 PCRNEEEERFSEVRSGECDSKIKDNKGKEGACAPYRRLHLCDQNLENINRYDKINNDTLLTDVCLAAKYEGQSISLDHPRYKQTYGGSQLCTMLARSFADIGDIIRGKNLYIRNKKKDKLQQNLKEIFKKINENLIKDLKSDPDKTAEVEKRYQNDTGDFFKLREDWWNANRKDIWKAMTCQAHDSDKYFREKDTEGRECTVKKCKCIDGDPPTNLDYVPQYLRWFEEWAEDFCRKRKHKLENAKNKCRGENGEDKYCDLNGYDCKKTAIGNMILIEGDGCHKCSVACDHFVHWIDDKKQEFIKQKNKY Preich_9.2 Small portion missing - 5 prime region 198 NNERKRKLEDNLKNIFQGKYMMIRITRRTRRGEIQQENPTKDDKDPYFFKLREDWWSLNRGDVWKAITCNVHGSKYFHNTCGAGKYRNPTQPNCQCIDNADVPTYFDYVPQFLRWFEEWAEDFCRKRKHKLENAIKNCRNDGEERYCSGNGYDCTQTVRAEDIYSMENNCHKCFFACNPFVKWLDKQKEEFNKQKEKY Preich_101 324 PCLNRSPDRFSYTEGAECDNSKIKDSNGEGGACAPFRRLSLCDQHLEHIDPQKITTHNLLADVCIAAKFEGESIKVYHGKHQLAYPDFKTNICIELARSFADIGDIIRGKDLYRGNNRKRKQLEDNLKNIFEKIYNNLIDDLSKNDGMKVKVTKEEAKKRYGSDSPHFYKLREDWWDANRQQVWDAITCGSAGSTYFRQRACGGKPTDGHCRCNDDKPGEDKANVDPPTFFDYVPQYLRWFEEWAEDFCRKRKHKLENAKKQCRGRNGNEKYCDRYGLDCTKTIYKRSHFVIDNDCTNCLLACDPFRKWMDKLKRSISKQKELL Preich_11 308 PCHRRWSVRFSDINGAECDESKIRGSNGKSEGACAPFRRLHVCDQNLEQIKPEQIKSTHNLLADVCLVAQHEGKSLVENYEEYKETHKDIDSDICTVLARSFSDIGDIVRGKDLFLGYKQGKKQLEEKFKKIFAKIHEKLDDPHAKNHYGSDKPNYYQLREDWWNANRKDVWKAITCDAPKDAYYTKKGLDGNIKDYALGQCRCITGDPPTNLDYVPQYLRWFEEWAEDFCRKRKKQLKDAIKICRGDDESGKERYCSSNGLDCKGTVREIEQFNWNRECTGCFFSCSDFRKWIKNQKEEFEKQKEKY Preich_13 266 PCRNEMEKAERFSHTKGAECDYRKIRDNEKKSNYGACAPFRRLSLCVRNLEHIDATKITTHNLLVDVCQAAKIEGESIRGYYAKYDQQYPGSVSTMCTMLARSFADIGDIIRGKDLYRGDNKENDRLQEQLKKYFKKIYEQLKNKDGAKTRYGGDEPHFYKLREDWWEHNRENVWKAITCAAGGGTYFRRTCGSGENRTPTQDNCRCIGGEVPTYFDYVPQYLRWLHEWAEDFCRKRKKKLQDAIKNCRGEDGSGKEKYCDLNKYD Preich_15 306 PCRFRDTKRFSDNAEAICTNNKINGNEGTTGACAPYRRRHVCDYNLEFIDVHRIRNTHDLLGNVLVMAKSEGESLTNSMKNHSSNTYKYSICNALAETFADIGDIIRGKDLYLGYSEEEKTNKKKVQGNLRSIFAAIYKNLKEQEKSPYKDGEKDGNYYKLRESWWALNRNDVWKALTCSAPEDAKYVKYFPSNTTTVSSNKCGHKDMDVPTNLDYVPQFLRWFNEWSEQFCRKRNIKLKKVMDACHNDSKQLYCSHNGYDCTKTIRNENILSDDPKCTGCLVKCSLYDSWLKNQRNEFEKQKEKY Preich_17 307 PCETEIVERFSDTQGSECDDSKIRDNYKTSNGKEGACAPYRRLHLCNRNLQNINRYDKINNDTLLADVCLAAKYEGASLIPDHDKYKLDINNSGSQLCTVLARSFADIGDIIRGKDLYLGGNNQRRQQLEEKLKKIFKEIHDKLEGPKDRYNGDEKKNFFKLREDWWTANRETVWKAITCEANGTYFRTTSCGGSKTETNCRCNDNQVPTYFDYVPQYLRWLEEWAEDFCRKKKKFVDMVKTNCGGDGENHKKRYCDRDGFDCTQTIRRIGNYVRGNDCRNCTVWCGRYEKWIDNQKQEFLKQKKKY Preich_23 297 PCTNLKGNANEECFSNTIGGQCTDEKMRSGGKGDCAPFRRLHLCDKNLENINTRSTTSDTLLGEVCLAAKFEGQSIKGRYTQHQGTNEDSQLCTMLARSFADIGDIIRGQDLFYGNTQESAQRKKLDNKLKEVFGNIYNELTKTPANGQKSAQEYYKDGTKNYFQLREDWWTANRETVWKTITCDARDYNYFRKTCGGGRDATQTSGYCRCNGDNPSQDKTNTDPPTYFDYVPQYLRWFEEWAEDFCRLRKHKLQNAINFCGDNTKALYCSGNGYDCTQTIRGDEHFVKVIIVLIVF Preich_24 321 PCKHKSEKRFSEVSGAECDNNKIKGNKGSKENSEGACAPFRRLHVCDRNLEQIQPHKITATDNLLVDVCEAAQFEGQSISGHYPQYQQKYKDTGSSFTMCTMLARSFADIGDIIRGKDLFLGYNETDKEQKGKLQDNLKNIFAKIYTDLMKKGKGKKVDVEKHYGKDPNFYQLREDWWERNRKTVWKAITCGAGSDSKYFRQTCGEGNEAHMTDGQCRCRITNDVPTYFDYVPQFLRWFEEWAEDFCRKRKHKLEVLDKQCRGENNEKYCDRNGYNCEETIRAKYIFDKGDDCYNCYIACTNFEPWIKNQKQEFIKQKEKY Preich_25 325 PCGTGKEDAKNEERFSDTLGGQCTNSKIKGNKDNNGKNGGACAPYRRLHLCNHNLESISTDKIDSDNARHKLLAEVCYAAKEEGASITRYHGKHQENNNDSQLCTELARSFADIGDIIRGKDLFYGNDEEKKQRDQLDKNLKDIFEKIHGGLDQRLQSTYNDKENFFKLREDWWTANRETVWKALTCNDDKKLTNAGYFRGTCDDKGTPSRAMHQCRCKKKDNTPDDQIPTYFDYVPQFLRWFEEWAEDFCRKKKKKLEDVKKYCRDYTKKLYCSGNGYDCTKTIYKKGKLFIGEHCTKCSVWCRMYEKWIDNQKKEFLKQRKKY Preich_26 319 PCRNGKDGKGEVVNRFSDTLGGQCTNSKMGNGGKGACAPYRRLSLCNKNLEYLNNYNGSNAKHYLLAKVCYAAKHEGESLKGYHDRYKEKHVDSQICTVLARSFADIGDIIRGKDLFRGNDEEKLQREKLDNNLKTIFGNIYRKLLDENKTKAGELKTRYQNDGDNYYKLREDWWTANRDQVWKAITCSDKLKGASYFRATCSDGNSKSQARNKCTCPNGDVPTYFDYVPQYLRWFEEWAEDFCRKRKKKIENAIKNCRGDSGMDKYCDLNKYDCTQTIRGDHDFVEGTDCIDCHHSCSHFVKWIDNQKLEFDKQKKKY Preich_32 308 PCRKGKEKRFSEVHGGECDKNKIRGTNKEGGACAPYRRINLCVRNLENISDYEHINNDTFLVDVLLAALHEGESLKAAHPQYQRTNNDSNTNLCTMLARSYADLGDIIRGKDLYRGDNGSDKLEKNLKKIFGKIYDQFIQKNKKLGDRYQKDKSTGNFYQLREDWWYANRKQVWKAIRCGAPDDADYFIKNTCSEGRSSAEKKCRCIVGDVPTYFDYVPQYLRWFEEWAEDFCRLRKHKLENAIKICRGPSGRDKYCDFNGYDCKQTVSARKELFEGDGCKNCFLPCDDFRTWIDNQQEEFQKQKENY Preich_34 Some regions with low coverage 310 PCGNKAVKRFSDTEGAQCDYRKIRGSDKKTGGACAPYRRLHLCDYNLKNISDFSKINNDRLLANVCLAAVHEGESLTRYHDHHEANYSDFHTNICTELARSFADIGDIIRGKDLYRGYDEEKEQRKQLDKNLEKIFAQIYQGLNGGAKDYYKDDNGGNFLKLREHWWEENREKIWTALTCHAPNSAQYLGLTCSGGGSSAKNKCRCIGFTVPTYFDYVPQYLRWFHEWAENFCRKKKKKLKDVKTNCREKNKNEEERYCDGDGFDCERTIYKRRYFVIDKDCNTCSVSCRPYEKWIGNQKGEFLKQKEKY Preich_35 Some regions with low coverage 329 PCANRSQVRFSDEGRSQCTDHRIKCTKEGSVGGACAPFRRLHLCDRNLEKLTDRNTRNTHNLLAEVCLAAQFEGASLKTYHEKYEANYHDFGSTICTVLARSFADIGDIIRGKDLYLGYDEKEKERREKLEQNLKKIFGNIYEDLKRTRTWGTKNEKATKAEERYRNDGPHYYQLREDWWDANRHDVWKAMTCNADGAYFRPTCQDDRGGSIANNKCRCTKSKGANTDQVPTYFDYVPQYLRWFEEWAEDFCRKRKHKLKDAITNCRGHHEDSSHRYCSRNGYDCKETVRGEDKLVSHPECTNCSVVCTPLVEWIDNKEKEFIKKEKNM Preich_40 344 PCRKEGKKEETPRFSKEQDDKYDEKKIGCSNSEGGACAPLRRLSLCNKNMENRNNNDNEKAKHDLLAEVCYAAKYEGETLERYREQYEVEYPSDSSSQLCTMLARSFADIGDIVRGKDLFRGYNRNDVEQKKRLQQNLKELFGKIYNELMDELNGEKKRGAKKKEEAKKRYEDNDREKNYFQLREDWWDANRATIWQAITCSEELRDASYFRSTCDKGDGKGENQTNHYCRCNGDNPEVDNPNTDPPTYFDYVPQFLRWFEEWAEDFCRKKRKKLENVKKKCRGKYQGKSRYCSLNGYDCEQTVRAKSKLRYGNRCIECSYACHPYVEWIDKKREEFNKQKEKY Preich_42 312 PCKDNPDVRFSDTEGAQCNRSKIKDNKSKEGACAPYRRLHLCDHNLENINDYVHITNHTLLADVCQAAKFEGESLTHYREEHQKIYPDSSFQICTVLARSFADIGDIIRGRDLYIRNRKENERLENNLKRIFKKIHEDVTTSTSGKKSDSALKTRYGGDENYFQLREDWWDANRKEVWDAMTCDAVSGSNYFRQTCLGNSSTLKNCRCFADVDPPTYFDYVPQYLRWFEEWGEEFCKKRKKQLQNAKEQCRKGDNGEDIYCDLKGFDCQRTKYKNSFFVEDTDCKKCSVACDNFMNWIEDQHKEFLKQRNKY Preich_46 307 PCRTGREKRFSDVGGGECDEKKIRGNNAGACAPYRRLNLCVKNLENINRYDKINNDTLLADVCLAAKHEGESLKGYHDQYQAKYPDTNSQLCTVLARSFADLGDIIRGKDLFLGNNRKDKLEDNLKRIFKEIYDKLGNPNAKEYYNKDNNGTGNYYKLREHWWEANRQQVWKAMTCNAGGGNIYFRRTCSGEQRTATRGNCQCIDTSVPTYFDYVPQFLRWFEEWAEDFCTKRKHKLQNAINICRGMGDDGNKLYCDLNGFDCKRTAKGEERFVEGGGCKKCSVPCDHFVHWIDNQKEEFDKQKNKY Preich_48 313 PCTHKSGKRFSEVHGAECDSRKIGGSNDNESGACAPFRRLHLCDKNLENISDYDSSNAKHNLLVDVCMGAQFEGASISGHYPQYQATYGDFPSQICTMLARSFADIGDIIRGKDMYLGYDENEKTRRQQLENKLKDIFKKIHDDVTNGGGRDSNALKTRYSDTTNYFQLREDWWDANRAKVWQAITCNAGGGKYFRKTCYGNETNNHCQCAAREVPTYFDYVPQFLRWFEEWAEDFCRKRKHKLKDVIQKCRKTEDGENKYCSRNGFDCERTIRGKNKLFKGEDCYNCYVACTRFVNWIDKEKAEFQKQKKRY Preich_61 Small portion missing - 3 prime region 298 PCLNRSPVRFSDTQGAYCSRKGIKGNDNINNARACAPYRRLHLCDKNLEQIKPYQINNTHNLLADVCLAAKYEGESLVDKHKAYKETHNDFNTNICTVLARSFADIGDIIRGKDLFLGHKQRKNQLETSLKTMFENIKENNISLNTLTNEQIREYWWALNRKQVWKAITCKAADNDNYLKTTENGTITQLYSKCGHYIEQDVPLNLDYVPQFLRWFYEWAEDFCTKRKKKIQNAIKNCRGEKNDKYCDLNGYDCTKTIRGENKLVSDMECTKCSSSCIPFVDWIDNQRKEFEKQKNKY Preich_63 177 PCEKRSDVRFSYTEGSECDNSKIKDSNGEGGACAPFRRLHLCDQNLEHIKTSNITTHNLLADVCQAAKFEGESLTHYRAQYQQKYGDSGSPICTVLARSFADIGDIIRGKDLYRGDKKEGARRDKLENNLKQVFKKIKDDNKSKLGDLPLDKVREYWWELNRETIWKAITWTLECLS Preich_64 293 PCDNRSPVRFSDIKGGECYWNRIKGNGTNRGTCSPYRRLHLCDRNLEKVIPEQIQTTHNLLVDVLLAAKHEGESLKKYHDQYKHSNPDSNICTVLARSFADIGDIIRGKDLYLGHKQGKIKLEQKLKEMFQNIQKSSGKLGSLSLDAVREYWWALNRKEVWKAITCKAHEDDTYSKNLENGMLLWYPKCGHHNDASVPTYFDYVPQYLRWFHEWSEDFCRKRRKNLEYAIEKCRGENKKKYCTLNGYDCTKTIRGREIYVSDTECTKCSVACDAYVKWIDNEKVQFEKQKNKY Preich_65 Some regions with low coverage 337 PCGNDGEQVNRFSDKKQAEYDKKKTKCIYGSNGSKSKGANSEGACAPYRRLHLCNKNMVNMVTNNSDSKAKHDLLAEVCMAAKYEAASIIPYNDKYNATYSDSPSQLCTELARSFADIGDIVRGRDLYSGNNRGRQKKLDDNLKRIFKEIHEQLEQPEKNYYEDKNGDNYFQLREDWWTANRETVWKAMTCSEQLSNAKYFRATCDSGDNRGFSQAKYHCRCTNSGKVGKVRKAGEVNIVPTYFDYVPQFLRWFEEWAEDFCRKKKKKLKDVKTNCRKKDNSSEYRYCSLNGYDCEKTVNARGRLRMGKGCTDCFFACNPYIDWINNQKEQFDKQVK Preich_67 331 PCGNTTGKDEVPRFSDTLGGQCTKEKISGSTNTCGACAPYRRLNLCDQNMEKMSTNNYDSSNAKHNLLAEVCLAAQFEAESLIPYHAKHHTDGTGSTICTELARSFADIGDIIRGKDLYHGYDSDEKARRDKLDENLKAIFKEIHEDVMNTRGRNGPALKARYKGDEANDFFQLREDWWNANRKEVWKALTCDDDNKLTNAGYFRGTCDDNGTPSRAMHQCRCKKKDNTLDDQVPTYFDYVPQYLRWFEEWAEDFCRLRKRKLEDAKKKCRTPNGKPKYCDLNRHDCVQTIRGEHVFVQDDECYNCSVACAHFVKWIDDQKLEFDKQKKKY Preich_69 Frameshift 326 PCANRSKIRFSDESRSQCTYNRIKDSENNDNKGACAPFRRLSVCDYNLEKIRTKKNRARHNLLLDVCLAANYEAESLINYREQYDSKYHDTGFTTCTMLARSFADIGDIIRGKDLYLGDKKEKLKLEEKLKEIFSKIYDNLRDDLKERTKKEKAKERYKKGDPNFFKLREDWWTANRETVWKAITCKADDNNRYFRPTCNSGSDNENNATQASHKCRCKNLKFTKDTNEVPTYFDYVPQYLRWFEEWAEDFCRKRKHKLQEAKKSCRGEGNDKYCSRNGYDCTQTVRGINKLVKSEECTKCSVLCTPFVEWIDNKQKEFEKQREKY Preich_73 334 PCGNGKEQRFSKERDAKYDEKKIGCSNSLGGACAPLRRLSVCNKNLENINEYDRSKAKNDLLADVCLAANIEGESLKTYHDQYELQYPSSGLTMCTELARSFADIGDIIRGRDLYIGKRINQNKYGNEPKTEREKLENKLKGVFEKIYNELTSGRNTRTNGALQARYGKDGNFFQLREDWWTANRETVWKAITCDKENKLAGAHYFRGTCNIGRGNEKTGTQAKDKCRCSDRDVTIVPTYFDYVPQYLRWFEEWAEDFCRKKKKKLPNVKNKCRGKTEGEKYCSLNGCDCTKTIRARGKLRYGNRCIDCLYACNPYVHWIDKKKEEFDKQKKKY Preich_78 323 PCGNGSANGETVRFSKERDAKYDEKKIGCSNSEGACAPLRRLSLCNKNLENINNIHSDKARHNLLAEVCMAAKYEGESLKTYHEQYASLYPSSGSTMCTELARSFADIGDIVRGRDLYLGKRKKPKEKETERENLENKLKQYFDKIHNSLGSSIKSRYNGDKENFYQLREDWWTANRETVWQALTCKVDSGTYFRPTCDINNEKGPSQTHNKCRCPQTGGASIVPTYFDYVPQFLRWFEEWAEDFCRKKKKKLPNVKNKCREKNRNEEERYCSLNGFDCEQTVRARGKLRYGKQCTDCSYACNPYVHWIDNKQKEFEKQKNKY Preich_84 Small portion missing - 5 prime region 297 HIFDLSDVRGGDCDNSKIRGNNNKNGGACAPYRRLSLCDHNLENISDYEHINNHTLLADVCLAANFEGDSLRKHHGQHQLLNTDFHTNICTELARSFADIGDIVRGRDLYRGDNGKDKLEKNLKTIFGKIHENLGSKEKKNYDDDDKNYYQLRADWWEANRQEVWKALTCHAGGGTYFRKTCSNNKTDTDNKCHCVNGDPPTYFDYVPQYLRWFEEWAEDFCRKKDKKLKDLKKNCRGPNGNKRYCSGDGYNCEKTIRGIGIYAIGGDCPKCSVWCGRYKNWIANQKQEFIKQKKKC Preich_87 var1csa 297 PCHGREQNRFDEDQESECGNKIRNYKRENDARACAPPRRRHMCDKNLEALNDINTQNIHDLLGNVLVTAKYEGQSIVNNHPHKGTSDVCTALARSFADIGDIVRGIDMFKPNVHDKVEKGLQEVFKKIHDGMEDEVKNYYNPDEFGNYYKLREAWWNVNRNKVWEAITCGALPKSAYFMQSEDNTQLFSDPKCGHNNKDDPLTNLDYVPQYLRWFDEWGEEFCRKRNIKLKKVKDSCRNEKERLYCSHNGYDCTTTIWKKGILHLDNKCTDCSTKCKVFEVWLGNQQEAFKKQKQKY Preich_93 Small portion missing - 5 prime region 303 LCNGTGKRFSEPLGGECDEKKISGNALGACAPYRRLHLCDRNLENISDFDNINNHTLLADVCLAALHEGESIRQNHGKYKQTNKSSQLCTMLARSFADIGDVIRGKDLYRGNNREKDGLEKKLKKIFGKIHDDVTTKGEKAEELKTRYQSDGDNYFQLREDWWDANREKVWKAITCGPAGGTYFRKTCSGGQLDTNTKCRCPIDGVPTYFDYVPQFLRWFEEWAEDFCRLRKHKLEDAKNKCRGVSGKDKYCTLNGYNCEETVRGDDKLIKGEDCNDCSSSCIPFVNWIDNQKQEFQKQKKKY Preich_94 312 PCKDRPDVRFSDTEKAQCGSSKISGSDKTSNGGACAPYRRLNLCDKNLENINDFHKIKNTNNLLLEVCLAAKYEGASISADHPRYKGKYYDSNICTELARSFADIGDIIRGKDLYRRDSRTDKLEENLKNIFGKIHNSLDRNLKSRYNDTQNYYQLREDWWDANRAKVWQAITCNAGGGKYFRATCGSGNEKSGTLTGDNCRCKNNDRKEETDQVPTYFDYVPQYLRWFEEWAEDFCRKRKHKLENAKKYCRGENGEEKYCSGGGHDCTRTVRARGYFVRGNECTNCSFLCGFYKKWIAKQKEEFEKQKNKC Preich_96 302 PCEHKKGKRLSEVHGAECDNRKIRGSKDKEGACAPFRRLHVCDKNLEQLDPDKIESTHNLLLEVCQAAKFEGQSISGYHDQYQLTNSGSQLCTMLARSFADIGDIIRGKDLYGGDKKKDKLENKLKQYFKEIYNKLREKEAQNYYNDPQGNYYKLREDWWALNRKEVWKAITCDAPNDGVQYFRKTCSNRGTYASRKCTCISGDVPTYFDYVPQYLRWFEEWAEDFCGKRKHKLQNAIKICRGVGGREKYCDLNGYDCKQTARGKERFGESADCKKCSVPCTHFANWIDNQKQEFLKQKNKY Preich_98 Some regions with low coverage 315 PCKDRPDVRFSDTEEAQCDRKKIRDSNDNEGACAPFRRLNVCDRNLEHIELENITRHNLLVDVCLAAKYEGESLERDHDKYKLDIDNSGSQLCTALARSFADIGDIVRGRDLFRGNNSKDKTDKLQNKLKEYFKKIYNDVTSGSNGKKSALQARYQDTDGGNFFKLREDWWELNRYNVWRAITCNVVGSDYFRYTCSDSQNPTQTNHNCQCIGGTVPTNFDYVPQFLRWFEEWAEDFCRKRKKKLKDVKANCRGTDSSGNQRYCSGDGYNCEKTIREIGIYAIGGDCPKCSFWCGRYKNWIANQKKEFEKQKKKY Preich_102 Some regions with low coverage 316 PCEGRQPVRFSDTKGAYCYRKGIKGNDEGTGGACAPFRRLHLCDKNLEQIEPHQVTTTDNLLADVCLAALHEGQSLVEKYKEYKAQNHDFDTDICTVLERSFADIGDIIRGKDLFLGYKQGKKQLEDKLIKIFEKIYKDLTNNEIKDVTKRNAAKKHYEDDEKDGKFFKLREDWWDANRNEVWKAITCKAEEGDKYNVIGSDGNITPSARGHCKGIADVPTNLDYVPQYLRWFEEWGEEFCRKRKKKLENAIKNCRQKEDKNKYCDLNGYDCEKTARGQNKFFPDSDCNKCSVACKPFVKWIDDKKQEFLKQKVKY Preich_126 295 PCRNGTEKRFSDTEGAQCHSRKIRDSKGESEGACAPFRRLHLCDKNLQNISDFNKINNKHNLLLEVLLAAKYEGESITLDHPRYHTESTGSTMCTELARSFADIGDIVRGKDLYRGGGRGRGKLDENLKTIFHKIKQSDKKLTSLTDDQVREYWWELNREKVWKAITCNAKGYKYFRPTCSRDHESQNMCRCPNADVPTNFDYVPQYLRWFHEWAEDFCRLRKKKLENAIKNCRYDESDDPKYCSRYGFDCTRTIRARGIYARGEDCNKCSVACKRFVDWIENQRKEFEKQKKKF Preich_128 Small portion missing - 3 prime region 265 PCGDGTKERFSDTKEAECAKNRIEGNGKSSEGGACAPFRRLHLCDHNLENINNFDNINNDRLLADVCLAAVHEGQSISVYHPKYQAHNSDFQTNMCTVLARSFADIGDIIRGKDLFLGNEPEKKQREKLEQNLKEIFNRIKGTNRTLTGLTDDQIREYWWEENRQKVWTALTCKAPEYAKYLGLTCPGGNSSADKQCRCIGFNVPTYFDYVPQYLRWFHEWAEDFCRKRKHKLKEAKEKCRKGKDGKELYCSGDGYGYDCTRTIR Preich_129 328 PCGKNEEDVKRFSDTLGGQCTDSKISGNKYNTKTGKDCGACAPYRRLHLCNHNLESIETNNYDSSNAKHKLLAEVCYAAKYEGDSLRKHHGKHKENNEGSRLCTELARSFADIGDIIRGKDLFRGNDEEKKKRKQLDEKLKDIFKKIYEELSKRNGAKQHYQDDNGGNFFKLREDWWEANRQDVWKALTCNADGAYFHATCSHSDGRSQSQAKEQCRCKKKDGAKADDQVPTYFDYVPQFLRWFEEWAEDFCRLRKKKLEDAKNKCRRVDNGQPKYCDLNRHDCVKTIRGKHVFVEDYDCMECHFSCSHFVKWLDNQKLEFNKQVKKY