Real-Time Whole-Genome Sequencing for Routine Typing, Surveillance, and Outbreak Detection of Verotoxigenic Escherichia coli

Supplemental material

Files in this Data Supplement:

• Supplemental file 1 -

  Table S1 (Complete set of typing results from routine and WGS typing, including sequence quality and epidemiological information on the isolates) and Fig. S4 (Phylogeny by NDtree based on positions called in all sequences, using Fastree for tree construction)

  PDF, 158K

• Supplemental file 2 -

  Dataset S2 (ND divergence between the suspected VTEC isolates)

  XLSX, 23K

• Supplemental file 3 -

  Dataset S3 (SNP divergence between the suspected VTEC isolates)

  XLSX, 24K