Detection of P-element insertion in D. melanogaster Conditions Command: perl tif_extended.pl Distribution site of TIF: https://github.com/akiomiyao/tif head = CATGATGAAATAACATA; tail = TATGTTATTTCATCATG; BLAST version: BLAST 2.2.26 BLAST options: blastall -p blastn -d ./blast/dmel-r5.55 -m 8 -b 1 Short Read Data: SRR823377 and SRR823382 Result of SRR823377 Chromosome TSD_start TSD_end TSD_size TSD_sequence Direction 2L 21844 21837 8 GTTTGATG reverse 2L 21837 21844 8 CATCAAAC forward 2L 2492944 2492937 8 GGTGAAAC reverse 2L 2492937 2492944 8 GTTTCACC forward 2L 3619244 3619237 8 TCTGATCC reverse 2L 3619237 3619244 8 GGATCAGA forward 2L 5972744 5972737 8 ACGTAAAC reverse 2L 5972737 5972744 8 GTTTACGT forward 2L 9613374 9613367 8 CTCACGCT reverse 2L 11516830 11516837 8 AGGCGGAC forward 2L 12027435 12027428 8 CCGCCGAC reverse 2L 12027428 12027435 8 GTCGGCGG forward 2R 6363048 6363041 8 GTCTCGGC reverse 2R 6363041 6363048 8 GCCGAGAC forward 2R 6365398 6365405 8 TTTCAGAT forward 2R 14015984 14015991 8 GTCTGCGC forward 2R 19520098 19520105 8 GTCGGTGT forward 3L 603586 603579 8 GTGTGAAC reverse 3L 3461540 3461533 8 CTGTGGAC reverse 3L 11002413 11002406 8 GGCCAACA reverse 3L 11002406 11002413 8 TGTTGGCC forward 3L 18179337 18179330 8 GCGCAGTC reverse 3L 18179330 18179337 8 GACTGCGC forward 3L 19164998 19164991 8 GGCTGACG reverse 3L 19164991 19164998 8 CGTCAGCC forward 3L 21759381 21759374 8 GGCTAGCC reverse 3L 21759374 21759381 8 GGCTAGCC forward 3R 3838972 3838965 8 GGTGAGCA reverse 3R 3838965 3838972 8 TGCTCACC forward 3R 3839002 3838995 8 CTCGCAAC reverse 3R 3838995 3839002 8 GTTGCGAG forward 3R 3916289 3916282 8 AGGTGGAA reverse 3R 3916282 3916289 8 TTCCACCT forward 3R 12105965 12105958 8 GTCTCCGG reverse 3R 12105958 12105965 8 CCGGAGAC forward 3R 20057042 20057035 8 ACTGTGCC reverse 3R 20057035 20057042 8 GGCACAGT forward U 91054 91047 8 GTTGAAGG reverse U 91047 91054 8 CCTTCAAC forward U 104801 104794 8 TTCTGATC reverse U 104794 104801 8 GATCAGAA forward U 335908 335915 8 GGCTATCC forward U 340111 340118 8 GGCTATCC forward U 354864 354871 8 GGCTATCC forward U 452264 452257 8 TTCTGATC reverse U 452257 452264 8 GATCAGAA forward U 576061 576054 8 TTCTGATC reverse U 576054 576061 8 GATCAGAA forward U 836874 836867 8 GGATAGCC reverse U 836867 836874 8 GGCTATCC forward U 867685 867678 8 CCTTCAAC reverse U 867678 867685 8 GTTGAAGG forward U 868374 868367 8 GATCAGAA reverse U 868367 868374 8 TTCTGATC forward U 891495 891502 8 GGCTATCC forward U 896397 896404 8 GGCTATCC forward U 976351 976344 8 TGGCCGCC reverse U 976344 976351 8 GGCGGCCA forward U 1088945 1088938 8 TTCTGATC reverse U 1088938 1088945 8 GATCAGAA forward U 1101515 1101508 8 TTCTGATC reverse U 1101508 1101515 8 GATCAGAA forward U 1104536 1104529 8 GATCAGAA reverse U 1104529 1104536 8 TTCTGATC forward U 1108324 1108317 8 GATCAGAA reverse U 1108317 1108324 8 TTCTGATC forward U 1173968 1173961 8 TTCTGATC reverse U 1173961 1173968 8 GATCAGAA forward U 1177154 1177147 8 TTCTGATC reverse U 1177147 1177154 8 GATCAGAA forward U 1187394 1187387 8 TTCTGATC reverse U 1187387 1187394 8 GATCAGAA forward U 1220590 1220583 8 GATCAGAA reverse U 1379287 1379280 8 GATCAGAA reverse U 1379280 1379287 8 TTCTGATC forward U 1379294 1379287 8 TTCTGATC reverse U 1379287 1379294 8 GATCAGAA forward U 1392304 1392297 8 CCTTCAAC reverse U 1392297 1392304 8 GTTGAAGG forward U 1617819 1617812 8 GATCAGAA reverse U 1617812 1617819 8 TTCTGATC forward U 1624244 1624237 8 GATCAGAA reverse U 1624237 1624244 8 TTCTGATC forward U 1721766 1721773 8 GGCTATCC forward U 1799712 1799705 8 CCTTCAAC reverse U 1799705 1799712 8 GTTGAAGG forward U 2003436 2003429 8 TTCTGATC reverse U 2003429 2003436 8 GATCAGAA forward U 2079924 2079917 8 TTCTGATC reverse U 2079917 2079924 8 GATCAGAA forward U 2190031 2190024 8 CCTTCAAC reverse U 2190024 2190031 8 GTTGAAGG forward U 2444672 2444665 8 GGATAGCC reverse U 2444665 2444672 8 GGCTATCC forward U 2838078 2838071 8 GATCAGAA reverse U 2838071 2838078 8 TTCTGATC forward U 3079898 3079891 8 GTTGAAGG reverse U 3079891 3079898 8 CCTTCAAC forward U 3438311 3438304 8 TTCTGATC reverse U 3438304 3438311 8 GATCAGAA forward U 3442100 3442093 8 TTCTGATC reverse U 3442093 3442100 8 GATCAGAA forward U 3445122 3445115 8 GATCAGAA reverse U 3445115 3445122 8 TTCTGATC forward U 3471913 3471906 8 GTTGAAGG reverse U 3471906 3471913 8 CCTTCAAC forward U 3897984 3897977 8 GATCAGAA reverse U 3897977 3897984 8 TTCTGATC forward U 3998991 3998984 8 CCTTCAAC reverse U 3998984 3998991 8 GTTGAAGG forward U 4334291 4334284 8 GTTGAAGG reverse U 4334284 4334291 8 CCTTCAAC forward U 4340891 4340884 8 GTTGAAGG reverse U 4340884 4340891 8 CCTTCAAC forward U 4344438 4344431 8 GGATAGCC reverse U 4344431 4344438 8 GGCTATCC forward U 4694808 4694801 8 GGATAGCC reverse U 4694801 4694808 8 GGCTATCC forward U 4716030 4716023 8 GGCTATCC reverse U 4716023 4716030 8 GGATAGCC forward U 4855576 4855569 8 GTTGAAGG reverse U 4855569 4855576 8 CCTTCAAC forward U 5014466 5014459 8 GATCAGAA reverse U 5014459 5014466 8 TTCTGATC forward U 5134397 5134404 8 GGCTATCC forward U 5536941 5536934 8 TTCTGATC reverse U 5536934 5536941 8 GATCAGAA forward U 5557026 5557019 8 TTCTGATC reverse U 5557019 5557026 8 GATCAGAA forward U 5599473 5599466 8 TTCTGATC reverse U 5599466 5599473 8 GATCAGAA forward U 5750931 5750924 8 GATCAGAA reverse U 5750924 5750931 8 TTCTGATC forward U 6003089 6003082 8 GATCAGAA reverse U 6003082 6003089 8 TTCTGATC forward U 6082705 6082698 8 CCTTCAAC reverse U 6082698 6082705 8 GTTGAAGG forward U 6153117 6153110 8 CCTTCAAC reverse U 6153110 6153117 8 GTTGAAGG forward U 6158036 6158043 8 GATCAGAA forward U 6193491 6193484 8 TTCTGATC reverse U 6193484 6193491 8 GATCAGAA forward U 6200019 6200012 8 TGGCCGCC reverse U 6200012 6200019 8 GGCGGCCA forward U 6415131 6415124 8 GGCTATCC reverse U 6435018 6435025 8 GATCAGAA forward U 6442460 6442453 8 TTCTGATC reverse U 6442453 6442460 8 GATCAGAA forward U 6622642 6622635 8 GGCTATCC reverse U 6622635 6622642 8 GGATAGCC forward U 6661692 6661685 8 GATCAGAA reverse U 6661685 6661692 8 TTCTGATC forward U 6882031 6882024 8 GGCGGCCA reverse U 6882024 6882031 8 TGGCCGCC forward U 6949316 6949309 8 GATCAGAA reverse U 6949309 6949316 8 TTCTGATC forward U 6959710 6959703 8 GATCAGAA reverse U 6959703 6959710 8 TTCTGATC forward U 7002504 7002497 8 GGATAGCC reverse U 7002497 7002504 8 GGCTATCC forward U 7005028 7005021 8 GTTGAAGG reverse U 7005021 7005028 8 CCTTCAAC forward U 7324351 7324344 8 GGATAGCC reverse U 7324344 7324351 8 GGCTATCC forward U 7325806 7325799 8 GGCTATCC reverse U 7382069 7382062 8 TTCTGATC reverse U 7382062 7382069 8 GATCAGAA forward U 7395641 7395634 8 GATCAGAA reverse U 7395634 7395641 8 TTCTGATC forward U 7437913 7437906 8 GTTGAAGG reverse U 7437906 7437913 8 CCTTCAAC forward U 7465210 7465203 8 GATCAGAA reverse U 7465203 7465210 8 TTCTGATC forward U 7476441 7476448 8 GATCAGAA forward U 7625199 7625192 8 GATCAGAA reverse U 7625192 7625199 8 TTCTGATC forward U 7807455 7807448 8 GATCAGAA reverse U 7807448 7807455 8 TTCTGATC forward U 7811204 7811197 8 CCTTCAAC reverse U 7811197 7811204 8 GTTGAAGG forward U 7871708 7871701 8 GTATAGAT reverse U 7872474 7872467 8 GTATAGAT reverse U 7872467 7872474 8 ATCTATAC forward U 8135364 8135357 8 CCTTCAAC reverse U 8135357 8135364 8 GTTGAAGG forward U 8215096 8215089 8 GATCAGAA reverse U 8215089 8215096 8 TTCTGATC forward U 8462801 8462794 8 TTCTGATC reverse U 8462794 8462801 8 GATCAGAA forward U 8583908 8583915 8 GGCTATCC forward U 8588523 8588516 8 TTCTGATC reverse U 8588516 8588523 8 GATCAGAA forward U 8595285 8595292 8 GGCTATCC forward U 8765320 8765313 8 CCTTCAAC reverse U 8765313 8765320 8 GTTGAAGG forward U 8862799 8862792 8 CCTTCAAC reverse U 8862792 8862799 8 GTTGAAGG forward U 8878260 8878253 8 GGCTATCC reverse U 8878253 8878260 8 GGATAGCC forward U 8896936 8896929 8 CCTTCAAC reverse U 8896929 8896936 8 GTTGAAGG forward U 8971488 8971481 8 GATCAGAA reverse U 9120398 9120391 8 TTCTGATC reverse U 9120391 9120398 8 GATCAGAA forward U 9139317 9139310 8 CCTTCAAC reverse U 9139310 9139317 8 GTTGAAGG forward U 9165167 9165160 8 CCTTCAAC reverse U 9165160 9165167 8 GTTGAAGG forward U 9386021 9386014 8 GATCAGAA reverse U 9386014 9386021 8 TTCTGATC forward U 9437966 9437959 8 GATCAGAA reverse U 9437959 9437966 8 TTCTGATC forward U 9442903 9442910 8 GGCTATCC forward U 9452303 9452296 8 CCTTCAAC reverse U 9452296 9452303 8 GTTGAAGG forward U 9508427 9508420 8 CCTTCAAC reverse U 9508420 9508427 8 GTTGAAGG forward U 9549924 9549917 8 TTCTGATC reverse U 9549917 9549924 8 GATCAGAA forward U 9570330 9570323 8 TGGCCGCC reverse U 9570323 9570330 8 GGCGGCCA forward U 9589156 9589149 8 CCTTCAAC reverse U 9589149 9589156 8 GTTGAAGG forward U 9764423 9764430 8 TGGCCGCC forward U 9808301 9808294 8 GATCAGAA reverse U 9808294 9808301 8 TTCTGATC forward X 1170719 1170726 8 GTACAGTG forward X 6762239 6762232 8 TTTCCTAC reverse X 6762232 6762239 8 GTAGGAAA forward X 7869381 7869388 8 GTCGAACG forward X 8819179 8819186 8 TTCCTGGC forward X 9479322 9479315 8 GCCTGGCG reverse X 9535027 9535020 8 ACACCCAC reverse X 9535020 9535027 8 GTGGGTGT forward X 13536119 13536112 8 GGTCCGGG reverse X 13536112 13536119 8 CCCGGACC forward X 16493930 16493923 8 GGTGTGAG reverse X 16589791 16589784 8 TTGTTTAG reverse X 16589784 16589791 8 CTAAACAA forward X 19781160 19781153 8 GTTTGGGC reverse X 19781153 19781160 8 GCCCAAAC forward X 22257104 22257097 8 ATCTGACC reverse X 22257097 22257104 8 GGTCAGAT forward Result of SRR823382 Chromosome TSD_start TSD_end TSD_size TSD_sequence Direction 2L 2492944 2492937 8 GGTGAAAC reverse 2L 2492937 2492944 8 GTTTCACC forward 2L 3619244 3619237 8 TCTGATCC reverse 2L 3619237 3619244 8 GGATCAGA forward 2L 3771695 3771702 8 GGTTCGTG forward 2L 4892112 4892105 8 ATGCGGCC reverse 2L 7307176 7307169 8 GTGCCAAC reverse 2L 7307169 7307176 8 GTTGGCAC forward 2L 9238165 9238158 8 GCATGGAC reverse 2L 9238158 9238165 8 GTCCATGC forward 2L 9613374 9613367 8 CTCACGCT reverse 2L 12038473 12038480 8 AGCCTGCT forward 2L 13286210 13286203 8 CCCTGGAA reverse 2L 14490582 14490575 8 GGCTGCAC reverse 2L 14490575 14490582 8 GTGCAGCC forward 2R 616578 616571 8 GTCTGGAA reverse 2R 616571 616578 8 TTCCAGAC forward 2R 5025390 5025383 8 ATACTGCC reverse 2R 5025383 5025390 8 GGCAGTAT forward 2R 6011747 6011754 8 GGCTAGTG forward 2R 10219841 10219848 8 GTGTGCCG forward 2R 12042356 12042363 8 GTACGTAC forward 2R 12471473 12471466 8 CTCGAGAC reverse 2R 12471466 12471473 8 GTCTCGAG forward 2R 12716580 12716573 8 GGGGAAAC reverse 2R 12716573 12716580 8 GTTTCCCC forward 2R 13606943 13606950 8 GGTGGTTG forward 2R 14605497 14605504 8 GTGGCGCC forward 2R 17266959 17266966 8 AGTTGAAC forward 2R 17533641 17533648 8 GTACCGTG forward 2R 18402144 18402151 8 GGGTGGAT forward 2R 19468373 19468366 8 ATGTGGGC reverse 2R 20655580 20655587 8 GGCTGACG forward 2R 20899589 20899596 8 GTTCTTGG forward 3L 3165056 3165049 8 CGCCGGAT reverse 3L 3165049 3165056 8 ATCCGGCG forward 3L 3249219 3249226 8 TGCTGCCC forward 3L 3250549 3250542 8 GTTTGTGC reverse 3L 3250542 3250549 8 GCACAAAC forward 3L 4283884 4283877 8 CACAGCCG reverse 3L 4283877 4283884 8 CGGCTGTG forward 3L 4692336 4692329 8 CTCTAGCC reverse 3L 6211152 6211145 8 GTCTCGAG reverse 3L 8056520 8056513 8 TGTTTGTT reverse 3L 8244026 8244027 2 GG forward 3L 8668758 8668765 8 CCCCTAGG forward 3L 10356957 10356950 8 CCCTCACA reverse 3L 14749615 14749608 8 GTTCGGTC reverse 3L 15946475 15946468 8 GCGCACAC reverse 3L 19164998 19164991 8 GGCTGACG reverse 3L 20487116 20487109 8 AACATATG reverse 3L 21759381 21759374 8 GGCTAGCC reverse 3LHet 2204781 2204774 8 GTCGGGGT reverse 3R 22954 22961 8 AGACGTAC forward 3R 216120 216113 8 GCTCAGTG reverse 3R 1413583 1413590 8 GTGTGTAC forward 3R 3645029 3645036 8 GTATCGCG forward 3R 9638649 9638642 8 ATCACGAT reverse 3R 9638642 9638649 8 ATCGTGAT forward 3R 10549487 10549480 8 CGCCGGAG reverse 3R 12068380 12068373 8 ATTGAAAC reverse 3R 12068373 12068380 8 GTTTCAAT forward 3R 13997956 13997949 8 GTTCACAT reverse 3R 14273875 14273882 8 GTATGCAC forward 3R 14983577 14983584 8 GCGCAGCA forward 3R 15006288 15006281 8 GCACACTG reverse 3R 16414044 16414037 8 ATCCAAAC reverse 3R 16414037 16414044 8 GTTTGGAT forward 3R 17123083 17123076 8 ATCCGGGG reverse 3R 17123076 17123083 8 CCCCGGAT forward 3R 17123098 17123091 8 GTTGGTGG reverse 3R 17123091 17123098 8 CCACCAAC forward 3R 18194871 18194878 8 GTCCGCCT forward 3R 20412296 20412289 8 CCGTGGGC reverse 3R 20412289 20412296 8 GCCCACGG forward 3R 20475780 20475773 8 ACACAGCC reverse 3R 20475773 20475780 8 GGCTGTGT forward 4 1020473 1020466 8 CTGCGCAG reverse U 91054 91047 8 GTTGAAGG reverse U 91047 91054 8 CCTTCAAC forward U 104801 104794 8 TTCTGATC reverse U 104794 104801 8 GATCAGAA forward U 452264 452257 8 TTCTGATC reverse U 452257 452264 8 GATCAGAA forward U 576061 576054 8 TTCTGATC reverse U 576054 576061 8 GATCAGAA forward U 867685 867678 8 CCTTCAAC reverse U 867678 867685 8 GTTGAAGG forward U 868374 868367 8 GATCAGAA reverse U 868367 868374 8 TTCTGATC forward U 1086530 1086537 8 TTCTGATC forward U 1088945 1088938 8 TTCTGATC reverse U 1088938 1088945 8 GATCAGAA forward U 1101515 1101508 8 TTCTGATC reverse U 1101508 1101515 8 GATCAGAA forward U 1104536 1104529 8 GATCAGAA reverse U 1104529 1104536 8 TTCTGATC forward U 1108324 1108317 8 GATCAGAA reverse U 1108317 1108324 8 TTCTGATC forward U 1173968 1173961 8 TTCTGATC reverse U 1173961 1173968 8 GATCAGAA forward U 1177154 1177147 8 TTCTGATC reverse U 1177147 1177154 8 GATCAGAA forward U 1187394 1187387 8 TTCTGATC reverse U 1187387 1187394 8 GATCAGAA forward U 1220590 1220583 8 GATCAGAA reverse U 1220583 1220590 8 TTCTGATC forward U 1379287 1379280 8 GATCAGAA reverse U 1379280 1379287 8 TTCTGATC forward U 1379294 1379287 8 TTCTGATC reverse U 1379287 1379294 8 GATCAGAA forward U 1392304 1392297 8 CCTTCAAC reverse U 1392297 1392304 8 GTTGAAGG forward U 1443258 1443251 8 GTCAGGAC reverse U 1443251 1443258 8 GTCCTGAC forward U 1443371 1443364 8 GTCAGGAC reverse U 1450349 1450342 8 GTCAGGAC reverse U 1450342 1450349 8 GTCCTGAC forward U 1450462 1450455 8 GTCAGGAC reverse U 1456038 1456045 8 TTCTGATC forward U 1617819 1617812 8 GATCAGAA reverse U 1617812 1617819 8 TTCTGATC forward U 1624244 1624237 8 GATCAGAA reverse U 1624237 1624244 8 TTCTGATC forward U 1799712 1799705 8 CCTTCAAC reverse U 1799705 1799712 8 GTTGAAGG forward U 1809225 1809218 8 TTCTGATC reverse U 1838072 1838065 8 TTCTGATC reverse U 2003436 2003429 8 TTCTGATC reverse U 2003429 2003436 8 GATCAGAA forward U 2079924 2079917 8 TTCTGATC reverse U 2079917 2079924 8 GATCAGAA forward U 2097015 2097008 8 GTCAGGAC reverse U 2097008 2097015 8 GTCCTGAC forward U 2097128 2097121 8 GTCAGGAC reverse U 2190031 2190024 8 CCTTCAAC reverse U 2190024 2190031 8 GTTGAAGG forward U 2246549 2246556 8 GTCAGGAC forward U 2246669 2246662 8 GTCCTGAC reverse U 2246662 2246669 8 GTCAGGAC forward U 2253648 2253655 8 GTCAGGAC forward U 2253768 2253761 8 GTCCTGAC reverse U 2253761 2253768 8 GTCAGGAC forward U 2783488 2783481 8 GTCAGGAC reverse U 2783481 2783488 8 GTCCTGAC forward U 2783601 2783594 8 GTCAGGAC reverse U 2790057 2790050 8 GTCAGGAC reverse U 2790050 2790057 8 GTCCTGAC forward U 2790170 2790163 8 GTCAGGAC reverse U 2838078 2838071 8 GATCAGAA reverse U 2838071 2838078 8 TTCTGATC forward U 3026464 3026471 8 TTCTGATC forward U 3079898 3079891 8 GTTGAAGG reverse U 3079891 3079898 8 CCTTCAAC forward U 3313537 3313544 8 GTCAGGAC forward U 3313657 3313650 8 GTCCTGAC reverse U 3313650 3313657 8 GTCAGGAC forward U 3438311 3438304 8 TTCTGATC reverse U 3438304 3438311 8 GATCAGAA forward U 3442100 3442093 8 TTCTGATC reverse U 3442093 3442100 8 GATCAGAA forward U 3445122 3445115 8 GATCAGAA reverse U 3445115 3445122 8 TTCTGATC forward U 3471913 3471906 8 GTTGAAGG reverse U 3471906 3471913 8 CCTTCAAC forward U 3640648 3640641 8 TTCTGATC reverse U 3897984 3897977 8 GATCAGAA reverse U 3897977 3897984 8 TTCTGATC forward U 3998991 3998984 8 CCTTCAAC reverse U 3998984 3998991 8 GTTGAAGG forward U 4334291 4334284 8 GTTGAAGG reverse U 4340891 4340884 8 GTTGAAGG reverse U 4340884 4340891 8 CCTTCAAC forward U 4855576 4855569 8 GTTGAAGG reverse U 4855569 4855576 8 CCTTCAAC forward U 5014466 5014459 8 GATCAGAA reverse U 5014459 5014466 8 TTCTGATC forward U 5215561 5215568 8 GTCAGGAC forward U 5215681 5215674 8 GTCCTGAC reverse U 5215674 5215681 8 GTCAGGAC forward U 5222920 5222927 8 GTCAGGAC forward U 5223040 5223033 8 GTCCTGAC reverse U 5223033 5223040 8 GTCAGGAC forward U 5333383 5333390 8 TTCTGATC forward U 5348139 5348132 8 TTCTGATC reverse U 5536941 5536934 8 TTCTGATC reverse U 5536934 5536941 8 GATCAGAA forward U 5557026 5557019 8 TTCTGATC reverse U 5557019 5557026 8 GATCAGAA forward U 5599473 5599466 8 TTCTGATC reverse U 5599466 5599473 8 GATCAGAA forward U 5750931 5750924 8 GATCAGAA reverse U 5750924 5750931 8 TTCTGATC forward U 5926168 5926175 8 TTCTGATC forward U 6003089 6003082 8 GATCAGAA reverse U 6003082 6003089 8 TTCTGATC forward U 6014327 6014334 8 GTCAGGAC forward U 6014447 6014440 8 GTCCTGAC reverse U 6014440 6014447 8 GTCAGGAC forward U 6082705 6082698 8 CCTTCAAC reverse U 6082698 6082705 8 GTTGAAGG forward U 6086266 6086259 8 GTCAGGAC reverse U 6086259 6086266 8 GTCCTGAC forward U 6086379 6086372 8 GTCAGGAC reverse U 6153117 6153110 8 CCTTCAAC reverse U 6153110 6153117 8 GTTGAAGG forward U 6158043 6158036 8 TTCTGATC reverse U 6158036 6158043 8 GATCAGAA forward U 6193491 6193484 8 TTCTGATC reverse U 6193484 6193491 8 GATCAGAA forward U 6272528 6272535 8 TTCTGATC forward U 6412947 6412954 8 TTCTGATC forward U 6435025 6435018 8 TTCTGATC reverse U 6435018 6435025 8 GATCAGAA forward U 6442460 6442453 8 TTCTGATC reverse U 6442453 6442460 8 GATCAGAA forward U 6661692 6661685 8 GATCAGAA reverse U 6661685 6661692 8 TTCTGATC forward U 6907780 6907773 8 TTCTGATC reverse U 6949316 6949309 8 GATCAGAA reverse U 6949309 6949316 8 TTCTGATC forward U 6959710 6959703 8 GATCAGAA reverse U 6959703 6959710 8 TTCTGATC forward U 7005028 7005021 8 GTTGAAGG reverse U 7382069 7382062 8 TTCTGATC reverse U 7382062 7382069 8 GATCAGAA forward U 7395641 7395634 8 GATCAGAA reverse U 7395634 7395641 8 TTCTGATC forward U 7437913 7437906 8 GTTGAAGG reverse U 7437906 7437913 8 CCTTCAAC forward U 7465210 7465203 8 GATCAGAA reverse U 7465203 7465210 8 TTCTGATC forward U 7476448 7476441 8 TTCTGATC reverse U 7476441 7476448 8 GATCAGAA forward U 7625199 7625192 8 GATCAGAA reverse U 7625192 7625199 8 TTCTGATC forward U 7805626 7805619 8 TTCTGATC reverse U 7807455 7807448 8 GATCAGAA reverse U 7807448 7807455 8 TTCTGATC forward U 7811204 7811197 8 CCTTCAAC reverse U 7811197 7811204 8 GTTGAAGG forward U 7850198 7850191 8 TTCTGATC reverse U 7963570 7963577 8 TTCTGATC forward U 8135364 8135357 8 CCTTCAAC reverse U 8135357 8135364 8 GTTGAAGG forward U 8215096 8215089 8 GATCAGAA reverse U 8215089 8215096 8 TTCTGATC forward U 8364961 8364968 8 GTCGGCAG forward U 8462801 8462794 8 TTCTGATC reverse U 8462794 8462801 8 GATCAGAA forward U 8517275 8517282 8 TTCTGATC forward U 8520857 8520864 8 GTCAGGAC forward U 8520977 8520970 8 GTCCTGAC reverse U 8520970 8520977 8 GTCAGGAC forward U 8588523 8588516 8 TTCTGATC reverse U 8588516 8588523 8 GATCAGAA forward U 8673229 8673236 8 GTCAGGAC forward U 8673349 8673342 8 GTCCTGAC reverse U 8673342 8673349 8 GTCAGGAC forward U 8765320 8765313 8 CCTTCAAC reverse U 8765313 8765320 8 GTTGAAGG forward U 8862799 8862792 8 CCTTCAAC reverse U 8862792 8862799 8 GTTGAAGG forward U 8896936 8896929 8 CCTTCAAC reverse U 8896929 8896936 8 GTTGAAGG forward U 8915786 8915779 8 GTCAGGAC reverse U 8915779 8915786 8 GTCCTGAC forward U 8915899 8915892 8 GTCAGGAC reverse U 8964553 8964546 8 GTCAGGAC reverse U 8964546 8964553 8 GTCCTGAC forward U 8964666 8964659 8 GTCAGGAC reverse U 8971488 8971481 8 GATCAGAA reverse U 8971481 8971488 8 TTCTGATC forward U 8987228 8987221 8 GTCAGGAC reverse U 8987221 8987228 8 GTCCTGAC forward U 8987341 8987334 8 GTCAGGAC reverse U 9038606 9038613 8 TTCTGATC forward U 9120398 9120391 8 TTCTGATC reverse U 9120391 9120398 8 GATCAGAA forward U 9139317 9139310 8 CCTTCAAC reverse U 9139310 9139317 8 GTTGAAGG forward U 9151078 9151071 8 GTCGGCAG reverse U 9165167 9165160 8 CCTTCAAC reverse U 9165160 9165167 8 GTTGAAGG forward U 9203763 9203756 8 GTCAGGAC reverse U 9203756 9203763 8 GTCCTGAC forward U 9203876 9203869 8 GTCAGGAC reverse U 9386021 9386014 8 GATCAGAA reverse U 9386014 9386021 8 TTCTGATC forward U 9437966 9437959 8 GATCAGAA reverse U 9437959 9437966 8 TTCTGATC forward U 9452303 9452296 8 CCTTCAAC reverse U 9452296 9452303 8 GTTGAAGG forward U 9462059 9462066 8 TTCTGATC forward U 9496392 9496385 8 TTCTGATC reverse U 9508427 9508420 8 CCTTCAAC reverse U 9508420 9508427 8 GTTGAAGG forward U 9549924 9549917 8 TTCTGATC reverse U 9549917 9549924 8 GATCAGAA forward U 9589156 9589149 8 CCTTCAAC reverse U 9589149 9589156 8 GTTGAAGG forward U 9808301 9808294 8 GATCAGAA reverse U 9808294 9808301 8 TTCTGATC forward U 9888178 9888185 8 GTCAGGAC forward U 9888298 9888291 8 GTCCTGAC reverse U 9888291 9888298 8 GTCAGGAC forward U 9896342 9896335 8 GTCCTGAC reverse U 9896335 9896342 8 GTCAGGAC forward U 9985900 9985893 8 TTCTGATC reverse U 10048155 10048148 8 GTCCTGAC reverse U 10048148 10048155 8 GTCAGGAC forward X 1103933 1103926 8 CTTCAAAC reverse X 1103926 1103933 8 GTTTGAAG forward X 1170726 1170719 8 CACTGTAC reverse X 1170719 1170726 8 GTACAGTG forward X 2187535 2187528 8 ATCTGTGC reverse X 2211665 2211658 8 ATTCGAGG reverse X 5258565 5258558 8 ACCCAGAT reverse X 5798551 5798544 8 GGGCGAGG reverse X 5859911 5859918 8 AGCTAGAG forward X 6060378 6060371 8 GCTCAAGG reverse X 6060371 6060378 8 CCTTGAGC forward X 6762239 6762232 8 TTTCCTAC reverse X 6762232 6762239 8 GTAGGAAA forward X 7194348 7194341 8 TGCCACGT reverse X 7599928 7599921 8 CATTGTAT reverse X 8819186 8819179 8 GCCAGGAA reverse X 8819179 8819186 8 TTCCTGGC forward X 9479315 9479322 8 CGCCAGGC forward X 9535027 9535020 8 ACACCCAC reverse X 9535020 9535027 8 GTGGGTGT forward X 9552113 9552120 8 GGCAGTAC forward X 10184223 10184216 8 CTCTGGCC reverse X 14720104 14720097 8 GTTTGGCT reverse X 14720097 14720104 8 AGCCAAAC forward X 15705871 15705864 8 GCTCTGCC reverse X 16214446 16214445 2 GC reverse X 18428614 18428607 8 ATCCGAAT reverse X 18428607 18428614 8 ATTCGGAT forward X 19047775 19047768 8 GCCTCAAG reverse X 19114627 19114620 8 GGCCAACC reverse X 19781160 19781153 8 GTTTGGGC reverse X 19781153 19781160 8 GCCCAAAC forward X 20201608 20201601 8 CTCCAGCC reverse X 22257104 22257097 8 ATCTGACC reverse X 22257097 22257104 8 GGTCAGAT forward