Parallel Geographic Variation in Drosophila melanogaster

Supporting Information

Supporting Information

Supporting Information - Figures S1-S5 and Tables S1-S29 (PDF, 1 MB)
Figure S1 - Australian cline Fst across chromosome arms. (PDF, 1018 KB)
Figure S2 - North American cline Fst across chromosome arms. (PDF, 765 KB)
Figure S3 - Comparison of Fst between continents in Cyp6G1 region. (PDF, 142 KB)
Figure S4 - Comparison of Fst between continents at tip of chromosome X. (PDF, 155 KB)
Figure S5 - Comparison of Fst between continents in Upd2 region. (PDF, 155 KB)
Table S1 - GO term enrichment for biological process in the Australian cline for genes that overlap windows in the top 1% tail of Fst. (PDF, 111 KB)
Table S2 - GO term enrichment for biological process in the Australian cline for genes that overlap windows in the top 2.5% tail of Fst. (PDF, 119 KB)
Table S3 - GO term enrichment for biological process in the Australian cline for genes that overlap windows in the top 5% tail of Fst. (PDF, 123 KB)
Table S4 - GO term enrichment for molecular function in the Australian cline for genes that overlap windows in the top 1% tail of Fst. (PDF, 109 KB)
Table S5 - GO term enrichment for molecular function in the Australian cline for genes that overlap windows in the top 2.5% tail of Fst. (PDF, 111 KB)
Table S6 - GO term enrichment for molecular function in the Australian cline for genes that overlap windows in the top 5% tail of Fst. (PDF, 113 KB)
Table S7 - GO term enrichment for cellular component in the Australian cline for genes that overlap windows in the top 1% tail of Fst. (PDF, 109 KB)
Table S8 - GO term enrichment for cellular component in the Australian cline for genes that overlap windows in the top 2.5% tail of Fst. (PDF, 109 KB)
Table S9 - GO term enrichment for cellular component in the Australian cline for genes that overlap windows in the top 5% tail of Fst. (PDF, 110 KB)
Table S10 - GO term enrichment for biological process in the North American cline for genes that overlap windows in the top 1% tail of Fst. (PDF, 110 KB)
Table S11 - GO term enrichment for biological process in the North American cline for genes that overlap windows in the top 2.5% tail of Fst. (PDF, 119 KB)
Table S12 - GO term enrichment for biological process in the North American cline for genes that overlap windows in the top 5% tail of Fst. (PDF, 125 KB)
Table S13 - GO term enrichment for molecular function in the North American cline for genes that overlap windows in the top 1% tail of Fst. (PDF, 110 KB)
Table S14 - GO term enrichment for molecular function in the North American cline for genes that overlap windows in the top 2.5% tail of Fst. (PDF, 112 KB)
Table S15 - GO term enrichment for molecular function in the North American cline for genes that overlap windows in the top 5% tail of Fst. (PDF, 112 KB)
Table S16 - GO term enrichment for cellular component in the North American cline for genes that overlap windows in the top 1% tail of Fst. (PDF, 109 KB)
Table S17 - GO term enrichment for cellular component in the North American cline for genes that overlap windows in the top 2.5% tail of Fst. (PDF, 109 KB)
Table S18 - GO term enrichment for cellular component in the North American cline for genes that overlap windows in the top 5% tail of Fst. (PDF, 110 KB)
Table S19 - Annotations of single nucleotide polymorphisms present on both continents. (PDF, 109 KB)
Table S21 - Functional annotation of extremely differentiated convergent SNPs. (PDF, 110 KB)
Table S22 - Candidate convergent nonsynonymous SNPs. (PDF, 116 KB)
Table S23 - PDF, 107 KB
Table S24 - Genome-wide average pairwise 1KB window Fst. (PDF, 108 KB)
Table S25 - ChrX average pairwise 1KB window Fst. (PDF, 108 KB)
Table S26 - Chr2L average pairwise 1KB window Fst. (PDF, 108 KB)
Table S27 - Chr2R average pairwise 1KB window Fst. (PDF, 108 KB)
Table S28 - Chr3L average pairwise 1KB window Fst. (PDF, 108 KB)
Table S29 - Chr3R average pairwise 1KB window Fst. (PDF, 108 KB)
Table S20 - Functional annotation of strongly convergent UTR and nonsynonymous SNPs (.xlsx, 167 KB)