Table 3. Motifs discovered using the masked promoter database achieving P < 0.05

Day

Motif

Frequency

Nominal P value

Adjusted

P value

1

TGACCTTG

0.04

7.30 ´ 10-11

4.78 ´ 10-6

TGACCTT

0.09

2.65 ´ 10-7

4.34 ´ 10-3

AAGGTC

0.20

7.83 ´ 10-6

3.21 ´ 10-2

 

CTTCCGG

0.12

2.56 ´ 10-6

4.20 ´ 10-2

2

TGACCT

0.26

1.43 ´ 10-13

5.84 ´ 10-10

TGACCTT

0.09

1.74 ´ 10-12

2.85 ´ 10-8

TGACCTTG

0.04

2.59 ´ 10-9

1.70 ´ 10-4

GACCTT

0.23

4.88 ´ 10-8

2.00 ´ 10-4

GTGACCTT

0.03

3.23 ´ 10-9

2.12 ´ 10-4

GTGACCT

0.09

1.58 ´ 10-8

2.59 ´ 10-4

AGGTCA

0.25

2.04 ´ 10-7

8.37 ´ 10-4

GACCTTG

0.08

7.65 ´ 10-8

1.25 ´ 10-3

GTGACCTTG

0.02

3.02 ´ 10-8

7.93 ´ 10-3

GGTCAC

0.24

2.00 ´ 10-6

8.17 ´ 10-3

ACCTTG

0.22

2.05 ´ 10-6

8.38 ´ 10-3

AGGTCAC

0.08

8.57 ´ 10-7

1.40 ´ 10-2

 

TTTTCGT

0.02

1.96 ´ 10-6

3.22 ´ 10-2

3

TGACCTT

0.09

7.77 ´ 10-16

1.27 ´ 10-11

CTTCCG

0.25

7.59 ´ 10-14

3.11 ´ 10-10

TGACCTTG

0.04

8.68 ´ 10-13

5.69 ´ 10-8

GTGACCTT

0.03

8.75 ´ 10-13

5.74 ´ 10-8

CTTCCGG

0.12

6.12 ´ 10-12

1.00 ´ 10-7

GTGACCT

0.09

3.96 ´ 10-11

6.48 ´ 10-7

GACCTT

0.23

1.39 ´ 10-9

5.71 ´ 10-6

ATGGCGGC

0.05

2.59 ´ 10-10

1.70 ´ 10-5

GACCTTG

0.08

1.23 ´ 10-9

2.01 ´ 10-5

TTCCGG

0.24

1.79 ´ 10-8

7.34 ´ 10-5

CTTCCGGC

0.04

1.66 ´ 10-9

1.09 ´ 10-4

TGACCT

0.26

3.58 ´ 10-8

1.47 ´ 10-4

CCTTCCG

0.08

1.67 ´ 10-8

2.74 ´ 10-4

AAGATGGCG

0.03

1.17 ´ 10-9

3.07 ´ 10-4

ATGGCGGCG

0.03

1.28 ´ 10-9

3.37 ´ 10-4

CCGGGG

0.38

1.03 ´ 10-7

4.23 ´ 10-4

GGCGGG

0.52

1.33 ´ 10-7

5.47 ´ 10-4

GTGACCTTG

0.02

4.87 ´ 10-9

1.28 ´ 10-3

ACTTCCG

0.08

9.04 ´ 10-8

1.48 ´ 10-3

AGATGGCG

0.04

3.79 ´ 10-8

2.48 ´ 10-3

ATGGCGG

0.10

1.66 ´ 10-7

2.72 ´ 10-3

AGATGGCGG

0.02

1.11 ´ 10-8

2.90 ´ 10-3

AGGTCA

0.25

1.04 ´ 10-6

4.25 ´ 10-3

CCCGCC

0.47

1.29 ´ 10-6

5.30 ´ 10-3

CGGTGA

0.20

1.38 ´ 10-6

5.66 ´ 10-3

GGCGGC

0.43

1.55 ´ 10-6

6.34 ´ 10-3

GCGGCG

0.39

1.83 ´ 10-6

7.51 ´ 10-3

TTCCGCT

0.05

4.87 ´ 10-7

7.98 ´ 10-3

GCGTCA

0.11

2.30 ´ 10-6

9.41 ´ 10-3

ACTTCCGG

0.04

1.89 ´ 10-7

1.24 ´ 10-2

TTCCGC

0.18

3.93 ´ 10-6

1.61 ´ 10-2

CGTCCT

0.17

4.00 ´ 10-6

1.64 ´ 10-2

CTGCGG

0.35

4.81 ´ 10-6

1.97 ´ 10-2

CGGGGC

0.43

4.86 ´ 10-6

1.99 ´ 10-2

GCCGGC

0.33

6.24 ´ 10-6

2.56 ´ 10-2

CCGGCT

0.27

6.34 ´ 10-6

2.60 ´ 10-2

GACCTTCC

0.03

4.71 ´ 10-7

3.09 ´ 10-2

GGGCGG

0.51

8.43 ´ 10-6

3.45 ´ 10-2

CCGGCTT

0.07

2.15 ´ 10-6

3.52 ´ 10-2

CGGAAGT

0.08

2.22 ´ 10-6

3.63 ´ 10-2

TGGCGGC

0.15

2.52 ´ 10-6

4.13 ´ 10-2

 

AAGATGGC

0.05

6.97 ´ 10-7

4.57 ´ 10-2

motifADE was performed by using the masked promoter database, consisting of regions of the promoters aligned and conserved between mouse and human. Motifs achieving a Bonferroni-corrected P value < 0.05 are shown.