Controlling for Gene Expression Changes in Transcription Factor Protein Networks

Supplemental Data

Files in this Data Supplement:

• Supplemental Information - Description of Supplemental Tables
• Supplemental Table 1 - Affinity Purification Datasets
• PSM Infor For Supplemental Table 1 - Peptide to Spectrum Match Information For Supplemental Table 1
• Supplemental Table 2 - Description of Halo-RelA associated proteins
• Supplemental Table 3 - Halo-RelA and FLAG RelA associated proteins defined using various control purifications.
• PSM Infor For Supplemental Table 3 - Peptide to Spectrum Match Information For Supplemental Table 3
• Supplemental Table 4 - Coupled dNSAF values and RNA Seq FPKM values
• PSM Infor For Supplemental Table 4 - Peptide to Spectrum Match Information For Supplemental Table 4
• Supplemental Table 5 - Alternative transcription factor control affinity purifications
• PSM Infor For Supplemental Table 5 - Peptide to Spectrum Match Information For Supplemental Table 5