Site-Specific Association with Host and Viral Chromatin by Kaposi's Sarcoma-Associated Herpesvirus LANA and Its Reversal during Lytic Reactivation

Supplemental material

Files in this Data Supplement:

• Supplemental file 4 -

  Table S1 (Primers used for ChIP-qPCR assays.)

  Table S2 (Sequencing and genome alignment summary.)

  Table S3 (Position-weight matrices of host LBS1 motifs in iSLK-219 and LEC-219 cells.)

  Table S4 (LANA-binding sites conserved across iSLK-219, LEC-219, BEC-219, and BJAB-219 cells.)

  PDF, 185K

• Supplemental file 1 -

  Data Set S1 (LANA-binding sites on the host genome of iSLK-219, LEC-219, BEC-219, BJAB-219, and BCBL-1 cells.)

  XLSX, 634K

• Supplemental file 2 -

  Data Set S2 (Output of CentriMo and PscanChIP analyses performed on host LANA-binding sites identified in LEC-219 cells.)

  XLSX, 28K

• Supplemental file 3 -

  Data Set S3 (Differentially regulated genes in KSHV-infected LECs and LANA occupancy.)

  XLSX, 110K