gene id,gene regulation,lncRNA id,lncRNA regulation,PCC,pvalue,lncRNA Name,lncRNA Size,lncRNA Start,lncRNA End,gene Name,gene Size,gene Start,gene End,matches,misMatches,strand
NM_001083957,up,ENSMUST00000122968,up,0.7142857,0.0141369,ENSMUST00000122968,10473,9879,9946,NM_001083957,1000,572,639,61,6,+
NM_001083957,up,ENSMUST00000122968,up,0.7142857,0.0141369,ENSMUST00000122968,10473,9879,9946,NM_001083957,1000,586,659,62,4,+
NM_001081139,up,ENSMUST00000161511,up,0.7142857,0.0141369,ENSMUST00000161511,19618,9557,9688,NM_001081139,1000,60,192,125,6,-
NM_001081139,up,ENSMUST00000161511,up,0.7142857,0.0141369,ENSMUST00000161511,19618,9619,9696,NM_001081139,1000,838,915,71,6,-
NM_008772,up,ENSMUST00000152875,up,0.6428571,0.03115079,ENSMUST00000152875,4830,2246,2298,NM_008772,1000,725,777,52,0,+
NM_181681,up,ENSMUST00000155076,up,0.8571429,0.001736111,ENSMUST00000155076,26885,6744,6804,NM_181681,1000,195,252,49,3,+
NM_001081139,up,ENSMUST00000155076,up,0.7142857,0.0141369,ENSMUST00000155076,26885,6748,6839,NM_001081139,1000,296,387,85,6,+
NM_001081139,up,ENSMUST00000155076,up,0.7142857,0.0141369,ENSMUST00000155076,26885,3668,3803,NM_001081139,1000,42,184,125,8,-
NM_001024474,up,ENSMUST00000155076,up,0.6428571,0.03115079,ENSMUST00000155076,26885,25740,25788,NM_001024474,1000,475,523,48,0,+
NM_053190,up,ENSMUST00000155076,up,0.6428571,0.03115079,ENSMUST00000155076,26885,3658,3793,NM_053190,1000,252,386,127,4,-
NM_026931,up,ENSMUST00000155076,up,0.6428571,0.03115079,ENSMUST00000155076,26885,3667,3798,NM_026931,1000,618,748,120,10,-
NM_008685,up,ENSMUST00000155076,up,0.7142857,0.0141369,ENSMUST00000155076,26885,3668,3813,NM_008685,1000,435,591,131,14,-
NM_001083955,up,ENSMUST00000155076,up,0.7142857,0.0141369,ENSMUST00000155076,26885,3665,3811,NM_001083955,1000,550,696,135,7,-
NM_053112,up,ENSMUST00000155076,up,0.7857143,0.005505952,ENSMUST00000155076,26885,25755,25803,NM_053112,1000,720,768,48,0,-
NM_026931,up,ENSMUST00000147649,up,0.7142857,0.0141369,ENSMUST00000147649,64371,53159,53322,NM_026931,1000,576,748,151,4,+
NM_026931,up,ENSMUST00000147649,up,0.7142857,0.0141369,ENSMUST00000147649,64371,55307,55432,NM_026931,1000,622,747,116,9,+
NM_026931,up,ENSMUST00000147649,up,0.7142857,0.0141369,ENSMUST00000147649,64371,28531,28642,NM_026931,1000,622,735,104,3,+
NM_026931,up,ENSMUST00000147649,up,0.7142857,0.0141369,ENSMUST00000147649,64371,52237,52361,NM_026931,1000,622,746,117,7,-
NM_026931,up,ENSMUST00000147649,up,0.7142857,0.0141369,ENSMUST00000147649,64371,25274,25363,NM_026931,1000,658,747,84,3,-
NM_001083955,up,ENSMUST00000147649,up,0.6428571,0.03115079,ENSMUST00000147649,64371,53175,53329,NM_001083955,1000,546,701,141,12,+
NM_001083955,up,ENSMUST00000147649,up,0.6428571,0.03115079,ENSMUST00000147649,64371,28529,28664,NM_001083955,1000,569,706,116,7,+
NM_001083955,up,ENSMUST00000147649,up,0.6428571,0.03115079,ENSMUST00000147649,64371,52249,52377,NM_001083955,1000,553,683,119,9,-
NM_001083955,up,ENSMUST00000147649,up,0.6428571,0.03115079,ENSMUST00000147649,64371,25266,25402,NM_001083955,1000,545,705,124,10,-
NM_009799,up,ENSMUST00000147649,up,0.6428571,0.03115079,ENSMUST00000147649,64371,24067,24127,NM_009799,1000,558,616,57,1,+
NM_009799,up,ENSMUST00000147649,up,0.6428571,0.03115079,ENSMUST00000147649,64371,36693,36730,NM_009799,1000,650,687,35,2,-
NM_026931,up,AK147582,up,0.6428571,0.03115079,AK147582,7912,1671,1814,NM_026931,1000,606,748,128,11,-
NM_013793,up,AK029495,up,0.6428571,0.03115079,AK029495,3017,929,962,NM_013793,1000,44,77,33,0,+
NM_053190,up,ENSMUST00000135363,up,0.6428571,0.03115079,ENSMUST00000135363,16966,2351,2498,NM_053190,1000,221,358,124,9,+
NM_053190,up,ENSMUST00000135363,up,0.6428571,0.03115079,ENSMUST00000135363,16966,3494,3629,NM_053190,1000,220,364,129,6,-
NM_053190,up,ENSMUST00000135363,up,0.6428571,0.03115079,ENSMUST00000135363,16966,5885,7025,NM_053190,1000,225,365,137,3,-
NM_053190,up,ENSMUST00000135363,up,0.6428571,0.03115079,ENSMUST00000135363,16966,6697,14494,NM_053190,1000,233,380,114,6,-
NM_013753,up,ENSMUST00000135363,up,0.7857143,0.005505952,ENSMUST00000135363,16966,10219,10407,NM_013753,1000,505,691,168,11,+
NM_013753,up,ENSMUST00000135363,up,0.7857143,0.005505952,ENSMUST00000135363,16966,5233,5298,NM_013753,1000,593,658,61,4,+
NM_001163550,up,ENSMUST00000135363,up,0.7142857,0.0141369,ENSMUST00000135363,16966,1892,2498,NM_001163550,1000,567,711,131,9,+
NM_001163550,up,ENSMUST00000135363,up,0.7142857,0.0141369,ENSMUST00000135363,16966,5865,7006,NM_001163550,1000,592,731,133,4,-
NM_001163550,up,ENSMUST00000135363,up,0.7142857,0.0141369,ENSMUST00000135363,16966,3495,3634,NM_001163550,1000,574,716,127,8,-
NM_001101471,up,ENSMUST00000135363,up,0.6428571,0.03115079,ENSMUST00000135363,16966,5928,5983,NM_001101471,1000,432,487,50,5,-
NM_013753,up,uc007cdl.1,up,0.8571429,0.001736111,uc007cdl.1,15175,3160,3454,NM_013753,1000,594,692,88,5,+
NM_053190,up,uc007cdl.1,up,0.8571429,0.001736111,uc007cdl.1,15175,12370,12514,NM_053190,1000,220,365,125,5,-
NM_019467,up,BC156060,up,0.7857143,0.005505952,BC156060,355333,166811,166917,NM_019467,1000,212,786,76,4,+
NM_019467,up,BC156060,up,0.7857143,0.005505952,BC156060,355333,153411,153483,NM_019467,1000,212,287,50,2,+
NM_019467,up,BC156060,up,0.7857143,0.005505952,BC156060,355333,12929,12995,NM_019467,1000,252,312,56,4,-
NM_019467,up,BC156060,up,0.7857143,0.005505952,BC156060,355333,276234,276306,NM_019467,1000,212,287,49,3,-
NM_145437,up,BC156060,up,0.6428571,0.03115079,BC156060,355333,159540,159591,NM_145437,1000,234,285,51,0,+
NM_145437,up,BC156060,up,0.6428571,0.03115079,BC156060,355333,291787,291827,NM_145437,1000,249,289,40,0,-
NM_053112,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,344477,344515,NM_053112,1000,251,289,38,0,+
NM_053112,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,22244,352880,NM_053112,1000,253,769,85,0,+
NM_053112,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,323638,323676,NM_053112,1000,253,291,38,0,+
NM_053112,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,149453,149492,NM_053112,1000,252,291,36,3,+
NM_053112,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,330005,330126,NM_053112,1000,256,768,78,1,-
NM_053112,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,312155,330163,NM_053112,1000,259,768,77,1,-
NM_013590,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,21293,21403,NM_013590,1000,573,705,76,1,+
NM_013590,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,182868,182968,NM_013590,1000,626,708,60,0,+
NM_013590,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,21307,21403,NM_013590,1000,627,695,49,1,+
NM_013590,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,304498,330256,NM_013590,1000,520,697,108,5,-
NM_013590,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,21285,21337,NM_013590,1000,627,689,49,1,-
NM_013590,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,21283,21327,NM_013590,1000,605,669,44,0,-
NM_013590,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,304432,304515,NM_013590,1000,628,689,47,0,-
NM_013590,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,183055,183089,NM_013590,1000,657,703,34,0,-
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,52388,179535,NM_026931,1000,523,747,188,5,+
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,229303,303454,NM_026931,1000,530,746,195,11,+
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,22950,23128,NM_026931,1000,575,756,164,9,+
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,22950,49545,NM_026931,1000,587,757,165,5,+
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,196053,204106,NM_026931,1000,546,755,183,6,+
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,143351,143527,NM_026931,1000,530,755,160,8,+
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,225170,225328,NM_026931,1000,517,751,151,5,+
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,212445,276322,NM_026931,1000,592,747,151,2,+
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,39021,39173,NM_026931,1000,569,747,135,6,+
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,285494,314194,NM_026931,1000,576,747,152,7,+
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,200971,201136,NM_026931,1000,543,748,143,4,+
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,143890,144042,NM_026931,1000,592,735,129,3,+
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,235485,235639,NM_026931,1000,556,747,142,5,+
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,253250,253410,NM_026931,1000,592,748,144,7,+
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,76068,303790,NM_026931,1000,595,756,151,7,+
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,64749,326598,NM_026931,1000,523,777,227,9,-
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,166796,166990,NM_026931,1000,554,746,162,5,-
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,268975,289918,NM_026931,1000,530,751,169,10,-
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,171936,185345,NM_026931,1000,594,746,147,4,-
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,178049,178185,NM_026931,1000,594,732,132,3,-
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,153395,351460,NM_026931,1000,593,747,149,4,-
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,179982,180152,NM_026931,1000,592,747,150,1,-
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,131264,131474,NM_026931,1000,593,747,140,5,-
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,146867,147030,NM_026931,1000,598,748,140,5,-
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,84272,117159,NM_026931,1000,593,746,144,7,-
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,51377,51518,NM_026931,1000,622,763,129,9,-
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,142170,142295,NM_026931,1000,622,747,118,7,-
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,297410,297535,NM_026931,1000,622,747,118,7,-
NM_026931,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,203450,203628,NM_026931,1000,592,746,137,7,-
NM_001105561,up,BC156060,up,0.7857143,0.005505952,BC156060,355333,222214,229662,NM_001105561,1000,306,633,64,3,+
NM_001105561,up,BC156060,up,0.7857143,0.005505952,BC156060,355333,267937,267967,NM_001105561,1000,303,333,30,0,+
NM_182839,up,BC156060,up,0.6428571,0.03115079,BC156060,355333,162123,162190,NM_182839,1000,760,829,62,5,-
NM_001145899,up,BC156060,up,0.6428571,0.03115079,BC156060,355333,171934,171981,NM_001145899,1000,384,431,43,4,-
NM_001145899,up,BC156060,up,0.6428571,0.03115079,BC156060,355333,117010,117040,NM_001145899,1000,384,414,30,0,-
NM_001039484,up,BC156060,up,0.8571429,0.001736111,BC156060,355333,317792,317915,NM_001039484,1000,337,460,108,5,-
NM_001039484,up,BC156060,up,0.8571429,0.001736111,BC156060,355333,147759,147813,NM_001039484,1000,419,469,47,3,-
NM_007895,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,330005,330053,NM_007895,1000,545,593,47,1,-
NM_001012766,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,330005,330188,NM_001012766,1000,253,767,81,1,-
NM_001012766,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,312155,330033,NM_001012766,1000,249,767,74,1,-
NM_001012766,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,330002,330153,NM_001012766,1000,718,768,49,1,-
NM_001012766,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,71708,305257,NM_001012766,1000,249,769,70,2,-
NM_001012766,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,182912,182949,NM_001012766,1000,250,287,35,2,-
NM_001012766,up,BC156060,up,0.7142857,0.0141369,BC156060,355333,182888,182932,NM_001012766,1000,249,287,36,1,-
NM_053190,up,ENSMUST00000131146,up,0.6428571,0.03115079,ENSMUST00000131146,1540,600,741,NM_053190,1000,244,380,126,10,-
NM_007895,up,BC033910,up,0.7142857,0.0141369,BC033910,1954,1675,1712,NM_007895,1000,558,595,37,0,-
NM_001163550,up,NR_033804,up,0.7142857,0.0141369,NR_033804,8414,2911,3092,NM_001163550,1000,567,723,145,11,+
NM_001163550,up,NR_033804,up,0.7142857,0.0141369,NR_033804,8414,1511,1653,NM_001163550,1000,569,716,130,9,+
NM_053190,up,ENSMUST00000139600,up,0.9285714,0.000396825,ENSMUST00000139600,6602,4903,5492,NM_053190,1000,221,380,151,7,-
NM_008772,up,ENSMUST00000139600,up,0.7142857,0.0141369,ENSMUST00000139600,6602,5343,5480,NM_008772,1000,50,176,116,6,-
NM_133203,up,AK052837,up,0.7142857,0.0141369,AK052837,143614,55013,55062,NM_133203,1000,765,814,49,0,+
NM_008632,up,AK052837,up,0.8571429,0.001736111,AK052837,143614,92486,92541,NM_008632,1000,54,109,55,0,+
NM_001164423,up,AK052837,up,0.6428571,0.03115079,AK052837,143614,42815,42860,NM_001164423,1000,575,620,42,3,+
NM_001163550,up,AK052837,up,0.6428571,0.03115079,AK052837,143614,114080,114220,NM_001163550,1000,597,731,122,11,+
NM_001163550,up,AK052837,up,0.6428571,0.03115079,AK052837,143614,33914,34065,NM_001163550,1000,584,723,130,9,-
NM_053190,up,AK033429,up,0.6428571,0.03115079,AK033429,3291,2852,3001,NM_053190,1000,220,376,136,10,+
NM_008772,up,AK033429,up,0.7142857,0.0141369,AK033429,3291,2852,3002,NM_008772,1000,50,209,138,9,+
NM_016971,down,AK029623,down,0.7142857,0.0141369,AK029623,4060,288,427,NM_016971,1000,286,421,123,11,+
NM_008524,down,AK047585,down,0.6428571,0.03115079,AK047585,2460,1089,1216,NM_008524,1000,312,451,120,6,+
NM_001081416,down,uc007eed.1,down,0.6428571,0.03115079,uc007eed.1,46751,39484,39563,NM_001081416,1000,267,348,53,0,-
NM_008257,down,NR_028520,down,1,4.96E-05,NR_028520,4203,817,853,NM_008257,1000,520,560,35,1,+
NM_008355,down,uc007unr.1,down,0.6428571,0.03115079,uc007unr.1,11887,4653,4804,NM_008355,1000,391,543,124,7,+
NM_008355,down,uc007hdw.1,down,0.6428571,0.03115079,uc007hdw.1,3593,2121,2246,NM_008355,1000,407,538,81,4,+
NM_008355,down,NR_004441,down,0.6428571,0.03115079,NR_004441,59181,24867,24999,NM_008355,1000,387,521,110,8,-
NM_008524,down,ENSMUST00000138711,down,0.6428571,0.03115079,ENSMUST00000138711,48397,498,611,NM_008524,1000,338,451,103,10,+
NM_008524,down,ENSMUST00000138711,down,0.6428571,0.03115079,ENSMUST00000138711,48397,816,891,NM_008524,1000,315,412,67,3,+
NM_008524,down,ENSMUST00000138711,down,0.6428571,0.03115079,ENSMUST00000138711,48397,3869,4002,NM_008524,1000,312,451,124,5,-
NM_008524,down,ENSMUST00000138711,down,0.6428571,0.03115079,ENSMUST00000138711,48397,7340,7455,NM_008524,1000,339,456,110,5,-
NM_008524,down,ENSMUST00000138711,down,0.6428571,0.03115079,ENSMUST00000138711,48397,5694,5806,NM_008524,1000,338,451,103,9,-
NM_008257,down,ENSMUST00000138711,down,0.7857143,0.005505952,ENSMUST00000138711,48397,11407,11447,NM_008257,1000,516,557,37,0,+
NM_008257,down,ENSMUST00000138711,down,0.7857143,0.005505952,ENSMUST00000138711,48397,11410,11450,NM_008257,1000,153,190,37,0,-
NM_001167593,down,uc007vms.1,down,0.7142857,0.0141369,uc007vms.1,13622,5590,5634,NM_001167593,1000,649,693,44,0,+
NM_001167593,down,uc007vms.1,down,0.7142857,0.0141369,uc007vms.1,13622,512,548,NM_001167593,1000,657,693,36,0,-
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