Gene ID	Description	Gene Symbol	"Fold change, higher ventral than dorsal nerual fold"
17936	Ngfi-A binding protein 1	Nab1	2.4
110648	LIM homeobox transcription factor 1 alpha	Lmx1a	3.8
74016	PHD finger protein 19	Phf19	8
18227	"nuclear receptor subfamily 4, group A, member 2"	Nr4a2	3.5
64406	trans-acting transcription factor 5	Sp5	8.3
26427	cAMP responsive element binding protein 3-like 1	Creb3l1	8.2
11695	aristaless-like homeobox 4	Alx4	3.9
22431	Wilms tumor 1 homolog	Wt1	76.8
56461	"Kv channel interacting protein 3, calsenilin"	Kcnip3	2.4
228598	early B cell factor 4	Ebf4	2.5
18088	"NK2 transcription factor related, locus 2 (Drosophila)"	Nkx2-2	101.9
15376	forkhead box A2	Foxa2	282.2
72147	zinc finger and BTB domain containing 46	Zbtb46	2.1
21400	"transcription elongation factor A (SII), 2"	Tcea2	5.7
18741	paired-like homeodomain transcription factor 2	Pitx2	9.7
12395	"runt-related transcription factor 1; translocated to, 1 (cyclin D-related)"	Runx1t1	5.4
18124	"nuclear receptor subfamily 4, group A, member 3"	Nr4a3	44.5
72701	zinc fingerprotein 618	Zfp618	2.3
100182	AT-hook transcription factor	Akna	3.5
242509	basonuclin 2	Bnc2	13.5
108079	"protein kinase, AMP-activated, alpha 2 catalytic subunit"	Prkaa2	3.1
230587	GLIS family zinc finger 1	Glis1	2.4
18046	nuclear transcription factor-Y gamma	Nfyc	2
22642	zinc finger and BTB domain containing 17	Zbtb17	2.5
69743	"castor homolog 1, zinc finger (Drosophila)"	Casz1	4.2
100090	zinc finger and BTB domain containing 48	Zbtb48	2.6
17701	"homeobox, msh-like 1"	Msx1	126.2
19017	"peroxisome proliferative activated receptor, gamma, coactivator 1 alpha"	Ppargc1a	2.2
18096	NK6 homeobox 1	Nkx6-1	84.4
16873	LIM homeobox protein 5	Lhx5	2.5
208043	SET domain containing 1B	Setd1b	2.5
22255	UNC homeobox	Uncx	5.3
17135	"v-maf musculoaponeurotic fibrosarcoma oncogene family, protein K (avian)"	Mafk	6.3
56522	poly (A) polymerase beta (testis specific)	Papolb	17
68895	"RAS-like, family 11, member A"	Rasl11a	2.4
114142	forkhead box P2	Foxp2	4.1
208647	cAMP responsive element binding protein 3-like 2	Creb3l2	2.7
21679	TEA domain family member 4	Tead4	18.4
20678.chr6.1	SRY-box containing gene 5	Sox5	2
68992	zinc finger protein 580	Zfp580	2.7
384763	zinc finger protein 667	Zfp667	2.5
22690	zinc finger protein 28	Zfp28	8
18987	"POU domain, class 2, transcription factor 2"	Pou2f2	2.3
210172	zinc finger protein 526	Zfp526	2.2
55942	SERTA domain containing 1	Sertad1	3.6
54131	interferon regulatory factor 3	Irf3	2.2
70461	CREB regulated transcription coactivator 3	Crtc3	2.1
13593	early B cell factor 3	Ebf3	2.5
69752	zinc finger protein 511	Zfp511	2
12827	"collagen, type IV, alpha 2"	Col4a2	2.2
15111	heart and neural crest derivatives expressed transcript 2	Hand2	127.6
66929	ASF1 anti-silencing function 1 homolog B (S. cerevisiae)	Asf1b	2.1
212139	coiled-coil and C2 domain containing 1A	Cc2d1a	2.6
16373	Iroquois related homeobox 3 (Drosophila)	Irx3	10.4
15227	forkhead box F1a	Foxf1a	39.4
53325	BTG3 associated nuclear protein	Banp	2.2
100009600	"zinc finger, GATA-like protein 1"	Zglp1	19.8
57246	T-box 20	Tbx20	11.4
14247	Friend leukemia integration 1	Fli1	4.8
80288	B cell CLL/lymphoma 9-like	Bcl9l	2.7
17127	MAD homolog 3 (Drosophila)	Smad3	2.1
17130	MAD homolog 6 (Drosophila)	Smad6	5
64290	forkhead box B1	Foxb1	8.2
382118	zinc finger protein 167	Zfp167	2.2
21412	transcription factor 21	Tcf21	18.6
15214	hairy/enhancer-of-split related with YRPW motif 2	Hey2	4.4
71371	AT rich interactive domain 5B (MRF1-like)	Arid5b	5.1
83554	follistatin-like 3	Fstl3	27.8
216161	strawberry notch homolog 2 (Drosophila)	Sbno2	2.5
15353	high mobility group 20 B	Hmg20b	2.5
18029	nuclear factor I/C	Nfic	3.2
14797	amino-terminal enhancer of split	Aes	3.1
21886	"transducin-like enhancer of split 2, homolog of Drosophila E(spl)"	Tle2	9.9
66341	EP300 interacting inhibitor of differentiation 3	Eid3	2.9
71137	"regulatory factor X, 4 (influences HLA class II expression)"	Rfx4	5.5
13713	"ELK3, member of ETS oncogene family"	Elk3	3
216285	ALX homeobox 1	Alx1	15.7
14632	GLI-Kruppel family member GLI1	Gli1	10.5
17937	Ngfi-A binding protein 2	Nab2	2.6
22781	IKAROS family zinc finger 4	Ikzf4	3
11568	AE binding protein 1	Aebp1	2.8
50724	SAP30-like	Sap30l	3
15110	heart and neural crest derivatives expressed transcript 1	Hand1	162.1
214384	myocardin	Myocd	10.6
216874	calmodulin binding transcription activator 2	Camta2	2.1
193043	zinc finger protein 3	Zfp3	2.1
15414	homeobox B6	Hoxb6	102.1
15413	homeobox B5	Hoxb5	37.9
21833	thyroid hormone receptor alpha	Thra	3.3
217166	"nuclear receptor subfamily 1, group D, member 1"	Nr1d1	4.1
20848	signal transducer and activator of transcription 3	Stat3	4.5
19285	polymerase I and transcript release factor	Ptrf	2.4
14055	enhancer of zeste homolog 1 (Drosophila)	Ezh1	2.4
192231	hexamethylene bis-acetamide inducible 1	Hexim1	2.4
17977	nuclear receptor coactivator 1	Ncoa1	2.9
79221.chr12.2	histone deacetylase 9	Hdac9	2.1
11622	aryl-hydrocarbon receptor	Ahr	3
21869	NK2 homeobox 1	Nkx2-1	23
18094	"NK2 transcription factor related, locus 9 (Drosophila)"	Nkx2-9	142.7
15375	forkhead box A1	Foxa1	22.4
81703	Jun dimerization protein 2	Jdp2	21.9
53314	"basic leucine zipper transcription factor, ATF-like"	Batf	18.1
382639	zinc finger and BTB domain containing 42	Zbtb42	3.1
544922	zinc finger with KRAB and SCAN domains 4	Zkscan4	5.8
17702	"homeobox, msh-like 2"	Msx2	3
56541	hyaluronic acid binding protein 4	Habp4	3.9
13865	"nuclear receptor subfamily 2, group F, member 1"	Nr2f1	6.6
15229	forkhead box D1	Foxd1	2.7
54713	Fez family zinc finger 2	Fezf2	2.9
218772	"retinoic acid receptor, beta"	Rarb	2.1
20680	SRY-box containing gene 7	Sox7	4.4
13592	early B cell factor 2	Ebf2	7.8
13709	E74-like factor 1	Elf1	3
12224	Kruppel-like factor 5	Klf5	3.5
252973	grainyhead-like 2 (Drosophila)	Grhl2	2.9
22762	"zinc finger protein, multitype 2"	Zfpm2	14.1
387609	zinc fingers and homeoboxes 2	Zhx2	2.9
380993	zinc finger and AT hook domain containing	Zfat	3
52609	chromobox homolog 7	Cbx7	3.9
15370	"nuclear receptor subfamily 4, group A, member 1"	Nr4a1	6.6
20583	snail homolog 2 (Drosophila)	Snai2	16.5
50913	oligodendrocyte transcription factor 2	Olig2	44.8
13876	avian erythroblastosis virus E-26 (v-ets) oncogene related	Erg	4.4
20997	brachyury	T	7.1
449521	zinc finger protein 213	Zfp213	2.2
14885	"general transcription factor II H, polypeptide 4"	Gtf2h4	2.5
12393	runt related transcription factor 2	Runx2	2.3
224829	transcriptional regulating factor 1	Trerf1	2.4
77889	limb-bud and heart	Lbh	2.2
13819	endothelial PAS domain protein 1	Epas1	24.7
14465	GATA binding protein 6	Gata6	108.4
19290	purine rich element binding protein A	Pura	3
225518	PR domain containing 6	Prdm6	108.8
225631	"one cut domain, family member 2"	Onecut2	2.6
17131	MAD homolog 7 (Drosophila)	Smad7	2.1
110796	teashirt zinc finger family member 1	Tshz1	12.3
225908	predicted gene 98	Gm98	2.6
14237	forkhead box D4	Foxd4	2.2
76073	polycomb group ring finger 5	Pcgf5	6.3
15242	hematopoietically expressed homeobox	Hhex	4.9
56501	E74-like factor 4 (ets domain transcription factor)	Elf4	2
407786	"TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor"	Taf9b	2
18994	"POU domain, class 3, transcription factor 4"	Pou3f4	31.3
245671	Kruppel-like factor 8	Klf8	3.6