Genomic.Alteration.1 Genomic.Alteration.2 n11 n12 n21 n22 Fisher.p.value Relation.Type Err chr1q32_1-amp_at chr7q11_21-amp_at 54 1 70 11 0.0273066876014775 HIHI 0.0473901098901099 chr3q26_33-amp_at chr7p11_2-amp_at 40 0 83 13 0.0104943044565675 HIHI 0 chr3q26_33-amp_at chr7q11_21-amp_at 54 1 69 12 0.0148527471392721 HIHI 0.0446428571428571 chr3q26_33-amp_at chr7q21_2-amp_at 52 1 71 12 0.0159909857559017 HIHI 0.044973544973545 chr3q26_33-amp_at chr9p21_3-del_at 66 2 57 11 0.016614568086349 HIHI 0.0859213250517598 chr3q26_33-amp_at chr10p15_3-del_at 59 0 64 13 0.000566367687081042 HIHI 0 chr3q26_33-amp_at chr10p13-del_at 59 0 64 13 0.000566367687081042 HIHI 0 chr3q26_33-amp_at chr10p11_23-del_at 57 0 66 13 0.000666117075929539 HIHI 0 chr3q26_33-amp_at chr10q23_31-del_at 44 0 79 13 0.00942451245206 HIHI 0 chr3q26_33-amp_at chr10q26_3-del_at 47 0 76 13 0.00427274652404091 HIHI 0 chr3q26_33-amp_at chr10p-del_at 55 0 68 13 0.000852403701277827 HIHI 0 chr3q26_33-amp_at chr10q-del_at 52 0 71 13 0.00176599836076693 HIHI 0 chr7q11_21-amp_at chr10q23_31-del_at 37 7 18 74 6.16620929817431e-13 HIHI 0.120460704607046 chr12q15-amp_at chr10p15_3-del_at 56 3 63 14 0.0340812929107483 HIHI 0.108333333333333 chr12q15-amp_at chr10p13-del_at 56 3 63 14 0.0340812929107483 HIHI 0.108333333333333 chr12q15-amp_at chr10p11_23-del_at 54 3 65 14 0.0361011931302692 HIHI 0.109195402298851 chr19p13_2-amp_at chr7p11_2-amp_at 38 2 69 27 0.00234569665702798 HIHI 0.0577235772357724 chr19p13_2-amp_at chr7q21_2-amp_at 48 5 59 24 0.00921937740240294 HIHI 0.12962962962963 chr19p13_2-amp_at chr7q31_2-amp_at 50 5 57 24 0.00505545071569114 HIHI 0.12797619047619 chr19p13_2-amp_at chr7q36_1-amp_at 51 5 56 24 0.00298197882070446 HIHI 0.12719298245614 chr19p13_2-amp_at chr10p11_23-del_at 53 4 54 25 0.000542430048007013 HIHI 0.101149425287356 chr19p13_2-amp_at chr10q23_31-del_at 41 3 66 26 0.00359369749882684 HIHI 0.0833333333333333 chr19p13_2-amp_at chr10q26_3-del_at 44 3 63 26 0.00178300622862743 HIHI 0.08125 chr19p13_2-amp_at chr7p-amp_at 48 5 59 24 0.00921937740240294 HIHI 0.12962962962963 chr19p13_2-amp_at chr7q-amp_at 50 4 57 25 0.00119050828863105 HIHI 0.103030303030303 chr19p13_2-amp_at chr10p-del_at 51 4 56 25 0.00111641567350577 HIHI 0.102380952380952 chr19p13_2-amp_at chr10q-del_at 48 4 59 25 0.00228839573764119 HIHI 0.10440251572327 chr19q12-amp_at chr7p11_2-amp_at 39 1 67 29 0.000177845722796655 HIHI 0.028324154209284 chr19q12-amp_at chr7q11_21-amp_at 51 4 55 26 0.000600394615645234 HIHI 0.100230414746544 chr19q12-amp_at chr7q21_2-amp_at 50 3 56 27 0.000216187785872636 HIHI 0.0761648745519713 chr19q12-amp_at chr7q31_2-amp_at 51 4 55 26 0.000600394615645234 HIHI 0.100230414746544 chr19q12-amp_at chr7q36_1-amp_at 52 4 54 26 0.000335198949413889 HIHI 0.0996038483305037 chr19q12-amp_at chr10p11_23-del_at 52 5 54 25 0.00152212912730297 HIHI 0.123748609566185 chr19q12-amp_at chr10q23_31-del_at 42 2 64 28 0.000355036699239573 HIHI 0.0544802867383513 chr19q12-amp_at chr10q26_3-del_at 44 3 62 27 0.00101452577570902 HIHI 0.0796370967741935 chr19q12-amp_at chr7p-amp_at 49 4 57 26 0.00121258472525001 HIHI 0.101553166069295 chr19q12-amp_at chr7q-amp_at 50 4 56 26 0.000668859537491393 HIHI 0.100879765395894 chr19q12-amp_at chr10p-del_at 50 5 56 25 0.00290821779040847 HIHI 0.12528801843318 chr19q12-amp_at chr10q-del_at 48 4 58 26 0.00130169026357574 HIHI 0.102251978088862 chr1p36_23-del_at chr7p11_2-amp_at 39 1 78 18 0.0130545069474373 HIHI 0.0371951219512195 chr1p36_23-del_at chr10p15_3-del_at 55 4 62 15 0.0452614533202009 HIHI 0.133333333333333 chr1p36_23-del_at chr10p13-del_at 55 4 62 15 0.0452614533202009 HIHI 0.133333333333333 chr1p22_1-del_at chr9p21_3-del_at 67 1 60 8 0.0329810857696345 HIHI 0.0572463768115942 chr6q22_31-del_at chr7p11_2-amp_at 39 1 80 16 0.0228885427560018 HIHI 0.0399728997289973 chr6q22_31-del_at chr9p21_3-del_at 66 2 53 15 0.0012084709256152 HIHI 0.070048309178744 chr6q22_31-del_at chr10p15_3-del_at 57 2 62 15 0.00729787834448445 HIHI 0.0722222222222222 chr6q22_31-del_at chr10p13-del_at 57 2 62 15 0.00729787834448445 HIHI 0.0722222222222222 chr6q22_31-del_at chr10p11_23-del_at 55 2 64 15 0.00773498685155682 HIHI 0.0727969348659004 chr6q22_31-del_at chr10q23_31-del_at 43 1 76 16 0.0118940549488379 HIHI 0.0388888888888889 chr6q22_31-del_at chr10q26_3-del_at 47 0 72 17 0.000619539965634241 HIHI 0 chr6q22_31-del_at chr10p-del_at 53 2 66 15 0.0152476908445856 HIHI 0.0734126984126984 chr6q22_31-del_at chr10q-del_at 51 1 68 16 0.00270248954935598 HIHI 0.0372117400419287 chr6q26-del_at chr7p11_2-amp_at 38 2 74 22 0.0128378656979588 HIHI 0.064390243902439 chr6q26-del_at chr9p21_3-del_at 64 4 48 20 0.000517275432721485 HIHI 0.108985507246377 chr6q26-del_at chr10p11_23-del_at 53 4 59 20 0.00604992763344414 HIHI 0.11448275862069 chr6q26-del_at chr10q23_31-del_at 42 2 70 22 0.0069640124179084 HIHI 0.0622222222222222 chr6q26-del_at chr10q26_3-del_at 45 2 67 22 0.00208150084317794 HIHI 0.0608333333333333 chr6q26-del_at chr10p-del_at 51 4 61 20 0.010943401214405 HIHI 0.115714285714286 chr6q26-del_at chr10q-del_at 49 3 63 21 0.00479533659014098 HIHI 0.0883018867924528 chr10p15_3-del_at chr7p11_2-amp_at 37 3 22 74 1.48410801948685e-14 HIHI 0.0558161350844278 chr10p13-del_at chr7p11_2-amp_at 37 3 22 74 1.48410801948685e-14 HIHI 0.0558161350844278 chr10p11_23-del_at chr7p11_2-amp_at 37 3 20 76 2.16031256328864e-15 HIHI 0.0553353658536585 chr12p13_1-del_at chr10q23_31-del_at 44 0 80 12 0.00912822999978083 HIHI 0 chr12p13_1-del_at chr13q14_2-del_at 94 3 30 9 0.000677690019081389 HIHI 0.130690737833595 chr14q13_1-del_at chr9p21_3-del_at 65 3 54 14 0.00790194436802632 HIHI 0.105072463768116 chr14q13_1-del_at chr10q23_31-del_at 43 1 76 16 0.0118940549488379 HIHI 0.0388888888888889 chr14q13_1-del_at chr10q-del_at 50 2 69 15 0.0167973549508557 HIHI 0.0744234800838574 chr15q14-del_at chr7q31_2-amp_at 52 3 66 15 0.0376224185641806 HIHI 0.105733082706767 chr15q14-del_at chr7q36_1-amp_at 53 3 65 15 0.0373264804551874 HIHI 0.105263157894737 chr15q14-del_at chr10p15_3-del_at 56 3 62 15 0.0198657799505837 HIHI 0.103947368421053 chr15q14-del_at chr10p13-del_at 56 3 62 15 0.0198657799505837 HIHI 0.103947368421053 chr15q14-del_at chr10p11_23-del_at 54 3 64 15 0.0217773643715332 HIHI 0.10480943738657 chr15q14-del_at chr10q23_31-del_at 43 1 75 17 0.00703588815856532 HIHI 0.0374269005847953 chr15q14-del_at chr10q26_3-del_at 46 1 72 17 0.00621169767036246 HIHI 0.0367324561403509 chr15q14-del_at chr7p-amp_at 50 3 68 15 0.0408170310622799 HIHI 0.10672514619883 chr15q14-del_at chr10p-del_at 52 3 66 15 0.0376224185641806 HIHI 0.105733082706767 chr15q14-del_at chr10q-del_at 50 2 68 16 0.0169099211929704 HIHI 0.0714995034756703 chr17q11_2-del_at TP53_M_mut_at 98 2 31 5 0.0141782665004243 HIHI 0.13490099009901 chr17q11_2-del_at TP53_mut_at 95 2 34 5 0.0206419833721136 HIHI 0.135204081632653 chr22q13_32-del_at chr10p15_3-del_at 54 5 56 21 0.00757885365899713 HIHI 0.134259259259259 chr22q13_32-del_at chr10p13-del_at 54 5 56 21 0.00757885365899713 HIHI 0.134259259259259 chr22q13_32-del_at chr10p11_23-del_at 52 5 58 21 0.0139417105043999 HIHI 0.135696040868455 chr22q13_32-del_at chr10q23_31-del_at 43 1 67 25 0.000302824437923105 HIHI 0.0296296296296296 chr22q13_32-del_at chr10q26_3-del_at 45 2 65 24 0.00105406711356281 HIHI 0.0578703703703704 chr22q13_32-del_at chr10p-del_at 51 4 59 22 0.00373853206896821 HIHI 0.10978835978836 chr22q13_32-del_at chr10q-del_at 50 2 60 24 0.000234291596440512 HIHI 0.0559049615653389 chr6q-del_at chr9p21_3-del_at 68 0 60 8 0.00628211157516847 HIHI 0 chr6q-del_at chr10q-del_at 52 0 76 8 0.0236197508599056 HIHI 0 chr7p-amp_at chr10q23_31-del_at 36 8 17 75 1.86699214940649e-12 HIHI 0.136507936507937 chr10p-del_at chr7p11_2-amp_at 37 3 18 78 2.76776095167998e-16 HIHI 0.0548780487804878 chr10q-del_at chr7p11_2-amp_at 36 4 16 80 4.51747456316829e-16 HIHI 0.0723098995695839 chr13q-del_at chr10q23_31-del_at 42 2 70 22 0.0069640124179084 HIHI 0.0622222222222222 chr13q-del_at chr10q-del_at 48 4 64 20 0.0200501099149348 HIHI 0.117735849056604 chr15q-del_at chr7q11_21-amp_at 55 0 72 9 0.0109312896574644 HIHI 0 chr15q-del_at chr7q21_2-amp_at 53 0 74 9 0.0121509184158724 HIHI 0 chr15q-del_at chr7q31_2-amp_at 55 0 72 9 0.0109312896574644 HIHI 0 chr15q-del_at chr7q36_1-amp_at 56 0 71 9 0.0105502511340511 HIHI 0 chr15q-del_at chr10q23_31-del_at 44 0 83 9 0.031257319298857 HIHI 0 chr15q-del_at chr10q26_3-del_at 47 0 80 9 0.027226251165175 HIHI 0 chr15q-del_at chr7p-amp_at 53 0 74 9 0.0121509184158724 HIHI 0 chr15q-del_at chr7q-amp_at 54 0 73 9 0.0114636817816951 HIHI 0 chr19p-amp_at chr7p11_2-amp_at 39 1 68 28 0.000199204479936505 HIHI 0.0288617886178862 chr19p-amp_at chr7q11_21-amp_at 51 4 56 25 0.00111641567350577 HIHI 0.102380952380952 chr19p-amp_at chr7q21_2-amp_at 49 4 58 25 0.00222809675290306 HIHI 0.103703703703704 chr19p-amp_at chr7q31_2-amp_at 50 5 57 24 0.00505545071569114 HIHI 0.12797619047619 chr19p-amp_at chr7q36_1-amp_at 52 4 55 25 0.000605310338643549 HIHI 0.101754385964912 chr19p-amp_at chr10p11_23-del_at 52 5 55 24 0.00268999601842806 HIHI 0.126436781609195 chr19p-amp_at chr10q23_31-del_at 42 2 65 27 0.000631621555387414 HIHI 0.0555555555555556 chr19p-amp_at chr10q26_3-del_at 44 3 63 26 0.00178300622862743 HIHI 0.08125 chr19p-amp_at chr7p-amp_at 49 4 58 25 0.00222809675290306 HIHI 0.103703703703704 chr19p-amp_at chr7q-amp_at 49 5 58 24 0.00541002730414513 HIHI 0.128787878787879 chr19p-amp_at chr10p-del_at 50 5 57 24 0.00505545071569114 HIHI 0.12797619047619 chr19p-amp_at chr10q-del_at 48 4 59 25 0.00228839573764119 HIHI 0.10440251572327 chr19q-amp_at chr7p11_2-amp_at 40 0 71 25 6.6080590810443e-05 HIHI 0 chr19q-amp_at chr7q11_21-amp_at 53 2 58 23 0.000194600210161527 HIHI 0.0563186813186813 chr19q-amp_at chr7q21_2-amp_at 51 2 60 23 0.000246296361473313 HIHI 0.056980056980057 chr19q-amp_at chr7q31_2-amp_at 52 3 59 22 0.00129817462274552 HIHI 0.084478021978022 chr19q-amp_at chr7q36_1-amp_at 54 2 57 23 0.000101526308531757 HIHI 0.0560053981106613 chr19q-amp_at chr9p21_3-del_at 63 5 48 20 0.00154081119482378 HIHI 0.132385730211817 chr19q-amp_at chr10p15_3-del_at 54 5 57 20 0.0129717733219674 HIHI 0.137820512820513 chr19q-amp_at chr10p13-del_at 54 5 57 20 0.0129717733219674 HIHI 0.137820512820513 chr19q-amp_at chr10p11_23-del_at 54 3 57 22 0.000647856336275716 HIHI 0.0835543766578249 chr19q-amp_at chr10q23_31-del_at 43 1 68 24 0.000337548235083496 HIHI 0.0303418803418803 chr19q-amp_at chr10q26_3-del_at 45 2 66 23 0.00195292131313368 HIHI 0.0592948717948718 chr19q-amp_at chr7p-amp_at 51 2 60 23 0.000246296361473313 HIHI 0.056980056980057 chr19q-amp_at chr7q-amp_at 52 2 59 23 0.00021086380538748 HIHI 0.0566433566433566 chr19q-amp_at chr10p-del_at 52 3 59 22 0.00129817462274552 HIHI 0.084478021978022 chr19q-amp_at chr10q-del_at 49 3 62 22 0.0027097375515351 HIHI 0.0859941944847605 chr20p-amp_at chr7p11_2-amp_at 40 0 66 30 7.15409059322244e-06 HIHI 0 chr20p-amp_at chr9p21_3-del_at 63 5 43 25 5.23780751105371e-05 HIHI 0.116877045348294 chr20p-amp_at chr10p11_23-del_at 53 4 53 26 0.000288140658508997 HIHI 0.0989988876529477 chr20p-amp_at chr10q23_31-del_at 42 2 64 28 0.000355036699239573 HIHI 0.0544802867383513 chr20p-amp_at chr10q26_3-del_at 44 3 62 27 0.00101452577570902 HIHI 0.0796370967741935 chr20p-amp_at chr7p-amp_at 48 5 58 25 0.00538971261306001 HIHI 0.126941457586619 chr20p-amp_at chr10p-del_at 51 4 55 26 0.000600394615645234 HIHI 0.100230414746544 chr20p-amp_at chr10q-del_at 48 4 58 26 0.00130169026357574 HIHI 0.102251978088862 chr20q-amp_at chr7p11_2-amp_at 40 0 64 32 3.16115877037279e-06 HIHI 0 chr20q-amp_at chr9p21_3-del_at 62 6 42 26 8.27847023817898e-05 HIHI 0.134387351778656 chr20q-amp_at chr10p11_23-del_at 52 5 52 27 0.00047700579934849 HIHI 0.118861024033438 chr20q-amp_at chr10q23_31-del_at 41 3 63 29 0.0011001054069749 HIHI 0.0787878787878788 chr20q-amp_at chr10q26_3-del_at 43 4 61 28 0.00265578726607352 HIHI 0.102272727272727 chr20q-amp_at chr10p-del_at 50 5 54 27 0.000947849591706863 HIHI 0.120400432900433 chr20q-amp_at chr10q-del_at 47 5 57 27 0.00319119917501547 HIHI 0.12292738707833 chr22q-del_at chr10p15_3-del_at 56 3 60 17 0.00646348463608958 HIHI 0.0964285714285714 chr22q-del_at chr10p13-del_at 56 3 60 17 0.00646348463608958 HIHI 0.0964285714285714 chr22q-del_at chr10p11_23-del_at 54 3 62 17 0.0125572443150368 HIHI 0.0972906403940887 chr22q-del_at chr10q23_31-del_at 43 1 73 19 0.00369842132076474 HIHI 0.0349206349206349 chr22q-del_at chr10q26_3-del_at 45 2 71 18 0.0113987095277876 HIHI 0.0684523809523809 chr22q-del_at chr10p-del_at 53 2 63 18 0.00254234628500956 HIHI 0.0654761904761905 chr22q-del_at chr10q-del_at 51 1 65 19 0.000774069445961265 HIHI 0.0332434860736747 NF1_N_mut_at chr7p-amp_at 53 0 76 7 0.0425609787204315 HIHI 0 NF1_N_mut_at chr7q-amp_at 54 0 75 7 0.0417740508552901 HIHI 0 EGFR_mut_at chr7p11_2-amp_at 39 1 75 21 0.00415553396510281 HIHI 0.0339342523860021 PTEN_mut_at chr7p11_2-amp_at 36 4 70 26 0.0396776945555496 HIHI 0.113296616837136 PTEN_mut_at chr7q11_21-amp_at 50 5 56 25 0.00290821779040847 HIHI 0.12528801843318 PTEN_mut_at chr7q21_2-amp_at 48 5 58 25 0.00538971261306001 HIHI 0.126941457586619 PTEN_mut_at chr10q23_31-del_at 39 5 67 25 0.0465762666115999 HIHI 0.136200716845878 RB1_mut_at chr13q14_2-del_at 95 2 31 8 0.000723757917694676 HIHI 0.101113172541744 RB1_mut_at PTEN_mut_at 104 2 22 8 8.0265176150447e-05 HIHI 0.100254885301614 FKBP9_mut_at chr7p11_2-amp_at 40 0 85 11 0.0333624618789809 HIHI 0 FKBP9_mut_at chr10p15_3-del_at 58 1 67 10 0.023267634400065 HIHI 0.05 FKBP9_mut_at chr10p13-del_at 58 1 67 10 0.023267634400065 HIHI 0.05 FKBP9_mut_at chr10p11_23-del_at 56 1 69 10 0.0251532029604133 HIHI 0.0502873563218391 FKBP9_mut_at chr10q23_31-del_at 44 0 81 11 0.0162689138861054 HIHI 0 FKBP9_mut_at chr10p-del_at 55 0 70 11 0.0030012513715755 HIHI 0 FKBP9_mut_at chr10q-del_at 52 0 73 11 0.00673423855467414 HIHI 0 NF1_mut_at chr7q11_21-amp_at 53 2 67 14 0.0155221580574765 HIHI 0.0766806722689076 NF1_mut_at chr7q21_2-amp_at 51 2 69 14 0.027274639384477 HIHI 0.0773420479302832 NF1_mut_at chr7q31_2-amp_at 53 2 67 14 0.0155221580574765 HIHI 0.0766806722689076 NF1_mut_at chr7q36_1-amp_at 54 2 66 14 0.0144559584035224 HIHI 0.0763673890608875 chr7p11_2-amp_at chr11p15_5-del_at 23 94 7 2 0.000598759383349681 HILO 0.110309278350515 chr7p11_2-amp_at IDH1_mut_at 23 96 7 0 2.41119228128531e-05 HILO 0 chr7q11_21-amp_at chr11p15_5-del_at 37 80 8 1 0.0011141431310538 HILO 0.0560975609756098 chr7q11_21-amp_at IDH1_mut_at 38 81 7 0 0.000537474159896159 HILO 0 chr7q21_2-amp_at chr11p15_5-del_at 36 81 7 2 0.00742469425355185 HILO 0.111904761904762 chr7q21_2-amp_at chr11p11_2-del_at 38 81 5 2 0.045172260074909 HILO 0.136904761904762 chr7q21_2-amp_at IDH1_mut_at 38 81 5 2 0.045172260074909 HILO 0.136904761904762 chr7q31_2-amp_at chr11p15_5-del_at 38 79 7 2 0.0100432110715591 HILO 0.11219512195122 chr12q14_1-amp_at PTEN_mut_at 71 25 28 2 0.023248524744324 HILO 0.0679723502304147 chr12q15-amp_at chr9p-del_at 86 17 23 0 0.0405387293266473 HILO 0 chr12q15-amp_at TP53_mut_at 71 16 38 1 0.0213026924393078 HILO 0.0402777777777778 chr19p13_2-amp_at chr13q14_2-del_at 61 26 36 3 0.00584718445503366 HILO 0.0875 chr19q12-amp_at chr13q14_2-del_at 61 26 35 4 0.0225307222260811 HILO 0.114516129032258 chr19q12-amp_at chr14q24_2-del_at 77 29 19 1 0.0421487996296719 HILO 0.0399385560675883 chr19q12-amp_at chr17p13_1-del_at 83 30 13 0 0.0370945868608658 HILO 0 chr19q12-amp_at TP53_mut_at 61 26 35 4 0.0225307222260811 HILO 0.114516129032258 chr21q21_1-amp_at chr10q26_3-del_at 31 6 87 2 0.00800910838010836 HILO 0.122222222222222 chr21q21_1-amp_at chr10p-del_at 39 6 79 2 0.0241109448923553 HILO 0.123306233062331 chr21q21_1-amp_at chr10q-del_at 36 6 82 2 0.0164589324128373 HILO 0.122875816993464 chr6q26-del_at chr13q14_2-del_at 66 21 36 3 0.0299532642416826 HILO 0.0975 chr9p21_3-del_at chr12q12-del_at 47 66 11 2 0.00606900464336433 HILO 0.0859213250517598 chr9p21_3-del_at chr12q15-del_at 48 68 10 0 0.000270840849338811 HILO 0 chr9p21_3-del_at RB1_mut_at 49 67 9 1 0.00553861689288547 HILO 0.0527009222661397 chr10p15_3-del_at chr11p15_5-del_at 40 77 9 0 0.000124766223420024 HILO 0 chr10p15_3-del_at IDH1_mut_at 42 77 7 0 0.00101740261862019 HILO 0 chr10p13-del_at chr11p15_5-del_at 40 77 9 0 0.000124766223420024 HILO 0 chr10p13-del_at IDH1_mut_at 42 77 7 0 0.00101740261862019 HILO 0 chr10p11_23-del_at chr11p15_5-del_at 38 79 9 0 8.27531073704242e-05 HILO 0 chr10p11_23-del_at IDH1_mut_at 40 79 7 0 0.000744884060061215 HILO 0 chr10q23_31-del_at ERBB2_M_mut_at 29 90 5 2 0.0153247791792374 HILO 0.135752688172043 chr10q23_31-del_at IDH1_mut_at 29 90 5 2 0.0153247791792374 HILO 0.135752688172043 chr10q26_3-del_at chr11p11_2-del_at 32 87 5 2 0.0227898283501849 HILO 0.136111111111111 chr10q26_3-del_at ERBB2_M_mut_at 32 87 5 2 0.0227898283501849 HILO 0.136111111111111 chr11p15_5-del_at chr7p-amp_at 36 7 81 2 0.00742469425355184 HILO 0.111904761904762 chr11p15_5-del_at chr7q-amp_at 36 8 81 1 0.000925640585643126 HILO 0.0560240963855422 chr11p15_5-del_at chr10p-del_at 37 8 80 1 0.0011141431310538 HILO 0.0560975609756098 chr11p15_5-del_at chr10q-del_at 34 8 83 1 0.00062918437959173 HILO 0.0558823529411765 chr13q14_2-del_at chr19p-amp_at 62 35 25 4 0.0234562581135665 HILO 0.116666666666667 chr13q14_2-del_at chr19q-amp_at 64 37 23 2 0.00673683796810295 HILO 0.0634615384615385 chr13q14_2-del_at chr20p-amp_at 61 35 26 4 0.0225307222260811 HILO 0.114516129032258 chr13q14_2-del_at chr20q-amp_at 60 34 27 5 0.0449290176056849 HILO 0.138257575757576 chr13q14_2-del_at EGFR_mut_at 67 37 20 2 0.0203235153309439 HILO 0.0684782608695652 chr14q24_2-del_at chr19p-amp_at 78 19 28 1 0.0423620675916625 HILO 0.0404761904761905 chr14q24_2-del_at chr19q-amp_at 81 20 25 0 0.0125356001632693 HILO 0 chr14q24_2-del_at chr20p-amp_at 77 19 29 1 0.042148799629672 HILO 0.0399385560675883 chr14q31_3-del_at chr19q-amp_at 83 18 25 0 0.0225609663804775 HILO 0 chr17p13_1-del_at chr19p-amp_at 84 13 29 0 0.0381740341748203 HILO 0 chr7p-amp_at IDH1_mut_at 36 83 7 0 0.000381660943845454 HILO 0 chr7q-amp_at IDH1_mut_at 38 81 6 1 0.00730964857458776 HILO 0.0685240963855422 chr10p-del_at IDH1_mut_at 38 81 7 0 0.000537474159896159 HILO 0 chr10q-del_at ERBB2_M_mut_at 37 82 5 2 0.0406609239357665 HILO 0.136764705882353 chr10q-del_at IDH1_mut_at 36 83 6 1 0.00553852160371078 HILO 0.0683823529411765 chr14q-del_at chr19q-amp_at 86 15 25 0 0.040442307440285 HILO 0 chr19p-amp_at TP53_mut_at 61 26 36 3 0.00584718445503366 HILO 0.0875 chr19q-amp_at TP53_mut_at 64 23 37 2 0.00673683796810295 HILO 0.0634615384615385 chr20p-amp_at TP53_mut_at 61 26 35 4 0.0225307222260811 HILO 0.114516129032258 chr20q-amp_at TP53_mut_at 59 28 35 4 0.00838510331302859 HILO 0.110606060606061