Genomic Insights into the Evolutionary Origin of Xanthomonas axonopodis pv. citri and Its Ecological Relatives

Supplemental material

Files in this Data Supplement:

• Supplemental file 1 -

  General assembly characteristics of the strains (Table S1), list of primers used in the study (Table S2), relative parameter values for recombination and mutation generated by Clonal Frame (Table S3), list of CRISPR elements identified in X. axonopodis strains (Table S4), Blast matches of condensation domain and ketosynthase domain (Table S5), comparison of lipopolysaccharide-coding gene clusters in X. axonopodis pathovars to their evolutionary relationship predicted by clonal frame (Fig. S1), Artemis comparison of hybrid NRPS-PKS system carrying contig in X. citri pv. mangiferaeindicae LMG 941 and X. axonopodis pv. citri strain 306 (Fig. S2), and phylogenetic tree of the conserved ketosynthase domain of the PKS system (Fig. S3).

  PDF, 359K

• Supplemental file 2 -

  List of unique genes, their putative function, and GC content in Xanthomonas fruit pathovars (Data Set S1).

  XLSX, 625K

• Supplemental file 3 -

  Annotation of contig 13 containing NRPS/PKS cluster as predicted by antiSMASH and ISGA in Xanthomonas citri pv. mangiferaeindicae (Data Set S2).

  XLSX, 30K