Comparative Analysis of Subtyping Methods against a Whole-Genome-Sequencing Standard for Salmonella enterica Serotype Enteritidis

Supplemental material

Files in this Data Supplement:

• Supplemental file 1 -

  Fig. S1 (Maximum likelihood tree based on core genome SNPs that combines the isolates used in the current study and a previous study)

  PDF, 1.0M

• Supplemental file 2 -

  Table S1 (Summary of PFGE and MLVA results)

  XLSX, 13K

• Supplemental file 3 -

  Table S2 (Summary of CRISPR-MLVST results)

  XLSX, 23K

• Supplemental file 4 -

  Table S3 (Summary of sequencing coverage)

  XLSX, 11K