High-Throughput RNA Sequencing-Based Virome Analysis of 50 Lymphoma Cell Lines from the Cancer Cell Line Encyclopedia Project

Supplemental material

Files in this Data Supplement:

• Supplemental file 1 -

  Fig. S1 (FPKM ratio of EBV lytic genes in Hs 611.T to other analyzed EBV-positive cell lines.)

  PDF, 438K

• Supplemental file 2 -

  Table S1 (List of all virus genomes with accession numbers for virome study.)

  XLSX, 56K

• Supplemental file 3 -

  Table S2 (Number of reads aligned to each virus in each cell line.)

  XLSX, 19K

• Supplemental file 4 -

  Table S3 (EBV integration analysis, Raji cell line.)

  XLSX, 53K

• Supplemental file 5 -

  Table S4 (MuLV integration analysis, DEL cell line.)

  XLSX, 53K

• Supplemental file 6 -

  Table S5 (HTLV-1 integration analysis, HuT 102 cell line.)

  XLSX, 19K

• Supplemental file 7 -

  Table S6 (HTLV-1 integration analysis, MJ cell line.)

  XLSX, 52K

• Supplemental file 8 -

  Table S7 (Evidence of new splicing of BARTs in the BamHI A region of the EBV genome.)

  XLSX, 10K