Gene-Expression Novelty in Allopolyploid Cotton: A Proteomic Perspective

Files in this data supplement:

  • Supporting Information: Figures S1-S4, Table S1, and Files S1-S6 (PDF, 838 KB)
  • Figure S1: Images of 2-DE gels. (PDF, 325 KB)
  • Figure S2: Frequency distribution plots for 2-DE spot volume. (PDF, 202 KB)
  • Figure S3: Panther classification of identified fiber proteins by iTRAQ. (PDF, 446 KB)
  • Figure S4: Pairwise comparison of developmental expression changes among diploid and polyploid cotton. (PDF, 181 KB)
  • Table S1: Protein identification and false discovery rate (FDR) analysis. (PDF, 105 KB)
  • File S1: Normalized spot volumes of 2-DE gels. (.xlsx, 549 KB)
  • File S2: Significant expression changes profiled by 2-DE. (.xlsx, 318 KB)
  • File S3: Protein identification and quantification by ProteinPilot iTRAQ analyses. (.xlsx, 1 MB)
  • File S4: Significant expression changes profiled by iTRAQ. (.xlsx, 220 KB)
  • File S5: GO enrichment analysis. (.xlsx, 97 KB)
  • File S6: Homoeolog-specific peptides and expression changes. (.xlsx, 3 MB)