"Additional File 6: Detailed information about the loci, the corresponding precursor sequences and structures, and the alignments of all reads for each hairpin of the 32 potentially novel miRNAs and 109 candidate miRNAs" novel160 T24-m0194 scaffold27.0:729747:729852:- 106(nt) -46.40(kcal/mol) ATCAGTTTGAACGGGATATTGGTCCGGTTCAATAAGAAAACAGTGCTCTAAAAGTGCTTGAGCTCTGCTTTTTGATTGAGCCGTGCCAATATCACGTGCCACTGTT T24-m0194 35 ..((((....(((.((((((((..(((((((((.(((((.(((.((((...........)))).))).))))).)))))))))..)))))))).)))...)))).. *************GGATATTGGTCCGGTTCAATA************************************************************************ T24-m0194-5p 7 ***************************************************************************TTGAGCCGTGCCAATATCACG********** T24-m0194-3p 28 -------------GGATATTGGTCCGGTTCAATA------------------------------------------------------------------------ t0796579 2 ---------------ATATTGGTCCGGTTCAATAAG---------------------------------------------------------------------- t1620155 1 ----------------TATTGGTCCGGTTCAATAAG---------------------------------------------------------------------- t4078967 1 ----------------TATTGGTCCGGTTCAATAAGA--------------------------------------------------------------------- t0624806 3 ---------------------------------------------------------------------------TTGAGCCGTGCCAATATCAC----------- t0506093 3 ---------------------------------------------------------------------------TTGAGCCGTGCCAATATCACG---------- t0045298 24 ---------------------------------------------------------------------------TTGAGCCGTGCCAATATCACGT--------- t3000458 1 // novel160 T37-m0213 scaffold27.0:729747:729852:- 106(nt) -46.40(kcal/mol) ATCAGTTTGAACGGGATATTGGTCCGGTTCAATAAGAAAACAGTGCTCTAAAAGTGCTTGAGCTCTGCTTTTTGATTGAGCCGTGCCAATATCACGTGCCACTGTT T37-m0213 67 ..((((....(((.((((((((..(((((((((.(((((.(((.((((...........)))).))).))))).)))))))))..)))))))).)))...)))).. *************GGATATTGGTCCGGTTCAATA************************************************************************ T37-m0213-5p 7 ***************************************************************************TTGAGCCGTGCCAATATCACG********** T37-m0213-3p 58 ----------------TATTGGTCCGGTTCAATAAGA--------------------------------------------------------------------- t0129789 7 ---------------------------TTCAATAAGAAAACAGTGCTC---------------------------------------------------------- t0454446 2 ---------------------------------------------------------------------------TTGAGCCGTGCCAATATCAC----------- t0362430 3 ---------------------------------------------------------------------------TTGAGCCGTGCCAATATCACG---------- t0012477 54 ---------------------------------------------------------------------------TTGAGCCGTGCCAATATCACGT--------- t3400341 1 // novel197 T24-m0241 scaffold322.0:453344:453487:+ 144(nt) -39.20(kcal/mol) ATCCACATTTATCGGGTTTAACGGTTAGAATTGCCATCCCTAGTGTGTGTGTGTACGTATATAGGCCCTTTAACAAGAGGGATCCCCATTTTTCAAAAAGATAGGGACATTCTCTTGACCGTTAGATTTGGCTTTAATGAAATT T24-m0241 34 .....((((..((((((((((((((((((.......(((((..(((((.(((((....))))).))......)))..)))))((((.(((((.....))))).)))).....)).))))))))))))))))....))))..... **********ATCGGGTTTAACGGTTAGAATT**************************************************************************************************************** T24-m0241-5p 7 ***************************************************************************************************************CTCTTGACCGTTAGATTTGGCTT********** T24-m0241-3p 27 ---------TATCGGGTTTAACGGTTAGAATT---------------------------------------------------------------------------------------------------------------- t3617504 1 ---------TATCGGGTTTAACGGTTAGAATTG--------------------------------------------------------------------------------------------------------------- t4118773 1 ----------ATCGGGTTTAACGGTTAGAATTGC-------------------------------------------------------------------------------------------------------------- t0347888 4 ------------CGGGTTTAACGGTTAGAATTGCCA------------------------------------------------------------------------------------------------------------ t1581379 1 --------------------------------------------------------------------------------------------------------------TCTCTTGACCGTTAGATTTGGCT----------- t4177136 1 ---------------------------------------------------------------------------------------------------------------CTCTTGACCGTTAGATTTGGCTT---------- t0051427 22 ---------------------------------------------------------------------------------------------------------------CTCTTGACCGTTAGATTTGGCTTT--------- t0438783 4 // novel197 T37-m0260 scaffold322.0:453344:453487:+ 144(nt) -39.20(kcal/mol) ATCCACATTTATCGGGTTTAACGGTTAGAATTGCCATCCCTAGTGTGTGTGTGTACGTATATAGGCCCTTTAACAAGAGGGATCCCCATTTTTCAAAAAGATAGGGACATTCTCTTGACCGTTAGATTTGGCTTTAATGAAATT T37-m0260 14 .....((((..((((((((((((((((((.......(((((..(((((.(((((....))))).))......)))..)))))((((.(((((.....))))).)))).....)).))))))))))))))))....))))..... **********ATCGGGTTTAACGGTTAGAATT**************************************************************************************************************** T37-m0260-5p 3 ***************************************************************************************************************CTCTTGACCGTTAGATTTGGCTT********** T37-m0260-3p 10 ----------ATCGGGTTTAACGGTTAGAAT----------------------------------------------------------------------------------------------------------------- t0558881 2 -------------GGGTTTAACGGTTAGAAT----------------------------------------------------------------------------------------------------------------- t0951623 1 ------------------------------------------------------------ATAGGCCCTTTAACAAGAGGGATC------------------------------------------------------------ t1188228 1 --------------------------------------------------------------------------------------------------------------TCTCTTGACCGTTAGATTTGGCTT---------- t0281981 3 ---------------------------------------------------------------------------------------------------------------CTCTTGACCGTTAGATTTGGC------------ t2927060 1 ---------------------------------------------------------------------------------------------------------------CTCTTGACCGTTAGATTTGGCTT---------- t0189397 5 ---------------------------------------------------------------------------------------------------------------CTCTTGACCGTTAGATTTGGCTTT--------- t3824707 1 // novel241 T24-m0297 scaffold427.0:352617:352765:+ 149(nt) -73.30(kcal/mol) CTGGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACCGCTTTACCCTGCTTTGCCGTGTCTGGGCCTATGAGCTAGGTGGCTCGATGTAATCGGTCACGGGGCAAAACGGGTCCCGCCTTGCATCAACTGAATCCGAGACCGCGGTGA T24-m0297 264 ...((((((((..(((((.((((((((((.(((((.(((.(((.(((.((((.(((.......)))....))))...(((((.((((...))))))))).))).))).))).))))).)))))))))).)))))..))))))))..... ********************TGGTGCAGGTCGGGAACCGCT************************************************************************************************************ T24-m0297-5p 145 ************************************************************************************************************CGGGTCCCGCCTTGCATCAAC******************** T24-m0297-3p 119 --------------------TGGTGCAGGTCGGGAACCGCT------------------------------------------------------------------------------------------------------------ t0007334 104 --------------------TGGTGCAGGTCGGGAACCGCTT----------------------------------------------------------------------------------------------------------- t0024377 40 ---------------------GGTGCAGGTCGGGAACCGCTT----------------------------------------------------------------------------------------------------------- t1921034 1 ---------------------------------------------------------------------------------------------------------AAACGGGTCCCGCCTTGCATCAAC-------------------- t4697277 1 -----------------------------------------------------------------------------------------------------------ACGGGTCCCGCCTTGCATCAA--------------------- t0343190 4 -----------------------------------------------------------------------------------------------------------ACGGGTCCCGCCTTGCATCAAC-------------------- t1279520 1 ------------------------------------------------------------------------------------------------------------CGGGTCCCGCCTTGCATCAA--------------------- t0095637 13 ------------------------------------------------------------------------------------------------------------CGGGTCCCGCCTTGCATCAAC-------------------- t0007731 100 // novel241 T24-m0334 scaffold494.0:207339:207487:+ 149(nt) -73.30(kcal/mol) CTGGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACCGCTTTACCCTGCTTTGCCGTGTCTGGGCCTATGAGCTAGGTGGCTCGATGTAATCGGTCACGGGGCAAAACGGGTCCCGCCTTGCATCAACTGAATCCGAGACCGCGGTGA T24-m0334 264 ...((((((((..(((((.((((((((((.(((((.(((.(((.(((.((((.(((.......)))....))))...(((((.((((...))))))))).))).))).))).))))).)))))))))).)))))..))))))))..... ********************TGGTGCAGGTCGGGAACCGCT************************************************************************************************************ T24-m0334-5p 145 ************************************************************************************************************CGGGTCCCGCCTTGCATCAAC******************** T24-m0334-3p 119 --------------------TGGTGCAGGTCGGGAACCGCT------------------------------------------------------------------------------------------------------------ t0007334 104 --------------------TGGTGCAGGTCGGGAACCGCTT----------------------------------------------------------------------------------------------------------- t0024377 40 ---------------------GGTGCAGGTCGGGAACCGCTT----------------------------------------------------------------------------------------------------------- t1921034 1 ---------------------------------------------------------------------------------------------------------AAACGGGTCCCGCCTTGCATCAAC-------------------- t4697277 1 -----------------------------------------------------------------------------------------------------------ACGGGTCCCGCCTTGCATCAA--------------------- t0343190 4 -----------------------------------------------------------------------------------------------------------ACGGGTCCCGCCTTGCATCAAC-------------------- t1279520 1 ------------------------------------------------------------------------------------------------------------CGGGTCCCGCCTTGCATCAA--------------------- t0095637 13 ------------------------------------------------------------------------------------------------------------CGGGTCCCGCCTTGCATCAAC-------------------- t0007731 100 // novel262 T24-m0326 scaffold48.0:691765:691886:- 122(nt) -48.10(kcal/mol) GGCTTTGAGGAGGTTTATGGAGTGGAAGGGTAGGAAAGAAGCAACTTCTCTTTTTGGTCTCAAATCCTAAAGATCGAATTTCTTTCCTAACCCTCCCATTCCTTCAATTTCCTAAAGTTTCT T24-m0326 19886 ((((((.((((((((...(((((((.(((((((((((((((....((((((((..((........)).)))))..))))))))))))).))))).)))))))...))))))))))))))... ********************AGTGGAAGGGTAGGAAAGAAG********************************************************************************* T24-m0326-5p 18817 ********************************************************************************TCTTTCCTAACCCTCCCATTCC******************** T24-m0326-3p 332 ----------AGGTTTATGGAGTGGAAGGGT------------------------------------------------------------------------------------------- t0722430 2 -----------GGTTTATGGAGTGGAAGGGTA------------------------------------------------------------------------------------------ t4565041 1 -----------GGTTTATGGAGTGGAAGGGTAG----------------------------------------------------------------------------------------- t0376549 4 ---------------TATGGAGTGGAAGGGTAGGA--------------------------------------------------------------------------------------- t0004586 149 ---------------TATGGAGTGGAAGGGTAGGAA-------------------------------------------------------------------------------------- t0003675 176 ---------------TATGGAGTGGAAGGGTAGGAAA------------------------------------------------------------------------------------- t0016209 56 ---------------TATGGAGTGGAAGGGTAGGAAAG------------------------------------------------------------------------------------ t0002852 214 ---------------TATGGAGTGGAAGGGTAGGAAAGA----------------------------------------------------------------------------------- t0056519 20 ---------------TATGGAGTGGAAGGGTAGGAAAGAA---------------------------------------------------------------------------------- t0021377 45 ----------------ATGGAGTGGAAGGGTAGGA--------------------------------------------------------------------------------------- t0666104 2 ----------------ATGGAGTGGAAGGGTAGGAA-------------------------------------------------------------------------------------- t0967404 2 ----------------ATGGAGTGGAAGGGTAGGAAA------------------------------------------------------------------------------------- t0137923 9 ----------------ATGGAGTGGAAGGGTAGGAAAG------------------------------------------------------------------------------------ t0087818 14 ----------------ATGGAGTGGAAGGGTAGGAAAGA----------------------------------------------------------------------------------- t0133710 10 ----------------ATGGAGTGGAAGGGTAGGAAAGAA---------------------------------------------------------------------------------- t0032335 32 -----------------TGGAGTGGAAGGGTAGGAA-------------------------------------------------------------------------------------- t3576456 1 -----------------TGGAGTGGAAGGGTAGGAAAG------------------------------------------------------------------------------------ t0038467 28 -----------------TGGAGTGGAAGGGTAGGAAAGAAG--------------------------------------------------------------------------------- t2408509 1 -------------------GAGTGGAAGGGTAGGAAAGA----------------------------------------------------------------------------------- t0061473 19 -------------------GAGTGGAAGGGTAGGAAAGAA---------------------------------------------------------------------------------- t0001028 476 -------------------GAGTGGAAGGGTAGGAAAGAAG--------------------------------------------------------------------------------- t0016146 56 -------------------GAGTGGAAGGGTAGGAAAGAAGC-------------------------------------------------------------------------------- t1277849 1 --------------------AGTGGAAGGGTAGGAAAG------------------------------------------------------------------------------------ t1231677 2 --------------------AGTGGAAGGGTAGGAAAGA----------------------------------------------------------------------------------- t0068762 17 --------------------AGTGGAAGGGTAGGAAAGAA---------------------------------------------------------------------------------- t0005257 134 --------------------AGTGGAAGGGTAGGAAAGAAG--------------------------------------------------------------------------------- t0000023 17885 --------------------AGTGGAAGGGTAGGAAAGAAGC-------------------------------------------------------------------------------- t0025795 38 --------------------AGTGGAAGGGTAGGAAAGAAGCA------------------------------------------------------------------------------- t0020281 47 --------------------AGTGGAAGGGTAGGAAAGAAGCAA------------------------------------------------------------------------------ t0123764 10 --------------------AGTGGAAGGGTAGGAAAGAAGCAAC----------------------------------------------------------------------------- t5302160 1 ---------------------GTGGAAGGGTAGGAAAGAA---------------------------------------------------------------------------------- t1260027 1 ---------------------GTGGAAGGGTAGGAAAGAAG--------------------------------------------------------------------------------- t0012334 69 ---------------------GTGGAAGGGTAGGAAAGAAGC-------------------------------------------------------------------------------- t0080415 15 ---------------------GTGGAAGGGTAGGAAAGAAGCA------------------------------------------------------------------------------- t2502635 1 ---------------------GTGGAAGGGTAGGAAAGAAGCAA------------------------------------------------------------------------------ t1020836 2 ----------------------TGGAAGGGTAGGAAAGAAG--------------------------------------------------------------------------------- t0091734 13 ------------------------------TAGGAAAGAAGCAACTTCTCT----------------------------------------------------------------------- t2008018 1 --------------------------------------------------------------------------------TCTTTCCTAACCCTCCCAT----------------------- t5307950 1 --------------------------------------------------------------------------------TCTTTCCTAACCCTCCCATTC--------------------- t1159609 2 --------------------------------------------------------------------------------TCTTTCCTAACCCTCCCATTCC-------------------- t0001703 315 --------------------------------------------------------------------------------TCTTTCCTAACCCTCCCATTCCT------------------- t1168464 2 ---------------------------------------------------------------------------------CTTTCCTAACCCTCCCATTCCT------------------- t0444024 3 ----------------------------------------------------------------------------------TTTCCTAACCCTCCCATTCC-------------------- t0575550 3 ----------------------------------------------------------------------------------TTTCCTAACCCTCCCATTCCTTCA---------------- t0721899 2 ----------------------------------------------------------------------------------TTTCCTAACCCTCCCATTCCTTCAA--------------- t5135737 1 -----------------------------------------------------------------------------------TTCCTAACCCTCCCATTCCTTCA---------------- t1089900 2 -----------------------------------------------------------------------------------TTCCTAACCCTCCCATTCCTTCAA--------------- t2699936 1 // novel290 T24-m0373 scaffold58.0:972403:972504:+ 102(nt) -49.80(kcal/mol) ACCTCTAAAAGAAGATGCACCAGAGAAGTTGAAGTTGAAGATGCACCAAAAGCTCTGATCTTCAGCTTCCACTTCTTTTGGTGCATCTTTTATTAGACCTAT T24-m0373 91 ...(((((.((((((((((((((((((((.((((((((((((((.......))....)))))))))))).))))).))))))))))))))).)))))..... ********************CAGAGAAGTTGAAGTTGAAGA************************************************************* T24-m0373-5p 31 ************************************************************TTCAGCTTCCACTTCTTTTGGT******************** T24-m0373-3p 57 -----TAAAAGAAGATGCACCAGAGAA--------------------------------------------------------------------------- t4626331 1 ---------AGAAGATGCACCAGAGAAGTTGAA--------------------------------------------------------------------- t2285091 1 -------------------CCAGAGAAGTTGAAGTTGAAG-------------------------------------------------------------- t0231551 6 --------------------CAGAGAAGTTGAAGTTGAAGA------------------------------------------------------------- t0048783 23 --------------------CAGAGAAGTTGAAGTTGAAGATGC---------------------------------------------------------- t4374832 1 ---------------------AGAGAAGTTGAAGTTGAAGATGCAC-------------------------------------------------------- t4774863 1 -------------------------AAGTTGAAGTTGAAGATGCACCA------------------------------------------------------ t1754192 1 ------------------------------------------------------------TTCAGCTTCCACTTCTTTTG---------------------- t3927865 1 ------------------------------------------------------------TTCAGCTTCCACTTCTTTTGG--------------------- t0870984 2 ------------------------------------------------------------TTCAGCTTCCACTTCTTTTGGT-------------------- t0016719 54 // novel290 T24-m0374 scaffold58.0:986368:986469:+ 102(nt) -49.80(kcal/mol) ACCTCTAAAAGAAGATGCACCAGAGAAGTTGAAGTTGAAGATGCACCATAAGCTCTGATCTTCAGCTTCCACTTCTTTTGGTGCATCTTTTATTAGACCTAT T24-m0374 91 ...(((((.((((((((((((((((((((.((((((((((((((.......))....)))))))))))).))))).))))))))))))))).)))))..... ********************CAGAGAAGTTGAAGTTGAAGA************************************************************* T24-m0374-5p 31 ************************************************************TTCAGCTTCCACTTCTTTTGGT******************** T24-m0374-3p 57 -----TAAAAGAAGATGCACCAGAGAA--------------------------------------------------------------------------- t4626331 1 ---------AGAAGATGCACCAGAGAAGTTGAA--------------------------------------------------------------------- t2285091 1 -------------------CCAGAGAAGTTGAAGTTGAAG-------------------------------------------------------------- t0231551 6 --------------------CAGAGAAGTTGAAGTTGAAGA------------------------------------------------------------- t0048783 23 --------------------CAGAGAAGTTGAAGTTGAAGATGC---------------------------------------------------------- t4374832 1 ---------------------AGAGAAGTTGAAGTTGAAGATGCAC-------------------------------------------------------- t4774863 1 -------------------------AAGTTGAAGTTGAAGATGCACCA------------------------------------------------------ t1754192 1 ------------------------------------------------------------TTCAGCTTCCACTTCTTTTG---------------------- t3927865 1 ------------------------------------------------------------TTCAGCTTCCACTTCTTTTGG--------------------- t0870984 2 ------------------------------------------------------------TTCAGCTTCCACTTCTTTTGGT-------------------- t0016719 54 // novel345 T24-m0451 scaffold82.0:571491:571637:- 147(nt) -53.50(kcal/mol) AGGTGATGCTGGGTGGATAGAGCTGCTGAGCTATGGATCCCAGAGTCCTATATGTCCTATATCTCAGATCAGATGAGATGCGATGGAAAGGATGATAGGCTTGTGGCTTGCATATCTCAGGAGCTGCATTACCTGTACGCTGCCTCT T24-m0451 974 (((((((((...........((((.(((((.((((.(..(((.((.(((((.((((((.((((.((..((....))..)).))))...))))))))))).)).)))..).)))).))))).)))))))))))))............. ********************AGCTGCTGAGCTATGGATCCC********************************************************************************************************** T24-m0451-5p 13 ***********************************************************************************************************TTGCATATCTCAGGAGCTGC******************** T24-m0451-3p 961 --------------------AGCTGCTGAGCTATGGATCC----------------------------------------------------------------------------------------------------------- t0521201 3 --------------------AGCTGCTGAGCTATGGATCCC---------------------------------------------------------------------------------------------------------- t0126563 10 ----------------------------------------------------------------------------------------------------------CTTGCATATCTCAGGAGCTGC-------------------- t0121242 11 -----------------------------------------------------------------------------------------------------------TTGCATATCTCAGGAGCTGC-------------------- t0000430 937 -----------------------------------------------------------------------------------------------------------TTGCATATCTCAGGAGCTGCA------------------- t0258085 6 -----------------------------------------------------------------------------------------------------------TTGCATATCTCAGGAGCTGCAT------------------ t0479818 3 ------------------------------------------------------------------------------------------------------------TGCATATCTCAGGAGCTGC-------------------- t0357098 4 // novel497 T37-m0242 scaffold30.0:39482:39597:+ 116(nt) -65.77(kcal/mol) CGGATCCTTTTCTCCTAATTTATCAAGTTCGGAGATTCGGGCTATTGAATCAGTCGTTGAATCAAATTTCAGTAGCCTGGATCCTCGAACTTGGTGGATTAGGAGGAAATTGATCC T37-m0242 23 .(((((.((((((((((((((((((((((((..((((((((((((((((..................))))))))))))))))..))))))))))))))))))))))))..))))) ************TCCTAATTTATCAAGTTCGGA*********************************************************************************** T37-m0242-5p 1 *************************************************************************************CGAACTTGGTGGATTAGGAGG********** T37-m0242-3p 22 ---------------TAATTTATCAAGTTCGGAGATTC------------------------------------------------------------------------------ t1580708 1 ----------------------------------------------------------------------------------CCTCGAACTTGGTGGATTAGGAGG---------- t3955173 1 -----------------------------------------------------------------------------------CTCGAACTTGGTGGATTAGGAGGA--------- t3115226 1 ------------------------------------------------------------------------------------TCGAACTTGGTGGATTAGGAGGAA-------- t1631990 1 -------------------------------------------------------------------------------------CGAACTTGGTGGATTAGGAGG---------- t0051004 15 -------------------------------------------------------------------------------------CGAACTTGGTGGATTAGGAGGA--------- t3821174 1 -------------------------------------------------------------------------------------CGAACTTGGTGGATTAGGAGGAA-------- t0692557 2 -------------------------------------------------------------------------------------CGAACTTGGTGGATTAGGAGGAAA------- t2770570 1 // novel540 T37-m0332 scaffold427.0:352617:352765:+ 149(nt) -73.30(kcal/mol) CTGGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACCGCTTTACCCTGCTTTGCCGTGTCTGGGCCTATGAGCTAGGTGGCTCGATGTAATCGGTCACGGGGCAAAACGGGTCCCGCCTTGCATCAACTGAATCCGAGACCGCGGTGA T37-m0332 371 ...((((((((..(((((.((((((((((.(((((.(((.(((.(((.((((.(((.......)))....))))...(((((.((((...))))))))).))).))).))).))))).)))))))))).)))))..))))))))..... ********************TGGTGCAGGTCGGGAACCGCT************************************************************************************************************ T37-m0332-5p 153 ************************************************************************************************************CGGGTCCCGCCTTGCATCAAC******************** T37-m0332-3p 216 --------------------TGGTGCAGGTCGGGAACC--------------------------------------------------------------------------------------------------------------- t0452945 2 --------------------TGGTGCAGGTCGGGAACCG-------------------------------------------------------------------------------------------------------------- t1558907 1 --------------------TGGTGCAGGTCGGGAACCGC------------------------------------------------------------------------------------------------------------- t0468612 2 --------------------TGGTGCAGGTCGGGAACCGCT------------------------------------------------------------------------------------------------------------ t0006487 95 --------------------TGGTGCAGGTCGGGAACCGCTT----------------------------------------------------------------------------------------------------------- t0014598 47 ---------------------GGTGCAGGTCGGGAACCGCTT----------------------------------------------------------------------------------------------------------- t0145226 6 --------------------------------------------------------------GGGCCTATGAGCTAGGTGGCT------------------------------------------------------------------ t0496936 2 -----------------------------------------------------------------------------------------------------------ACGGGTCCCGCCTTGCATCAA--------------------- t0176108 5 -----------------------------------------------------------------------------------------------------------ACGGGTCCCGCCTTGCATCAAC-------------------- t0424588 2 ------------------------------------------------------------------------------------------------------------CGGGTCCCGCCTTGCATCAA--------------------- t0047614 16 ------------------------------------------------------------------------------------------------------------CGGGTCCCGCCTTGCATCAAC-------------------- t0002851 193 // novel540 T37-m0370 scaffold494.0:207339:207487:+ 149(nt) -73.30(kcal/mol) CTGGCGGTCTCTAATTCGCTTGGTGCAGGTCGGGAACCGCTTTACCCTGCTTTGCCGTGTCTGGGCCTATGAGCTAGGTGGCTCGATGTAATCGGTCACGGGGCAAAACGGGTCCCGCCTTGCATCAACTGAATCCGAGACCGCGGTGA T37-m0370 371 ...((((((((..(((((.((((((((((.(((((.(((.(((.(((.((((.(((.......)))....))))...(((((.((((...))))))))).))).))).))).))))).)))))))))).)))))..))))))))..... ********************TGGTGCAGGTCGGGAACCGCT************************************************************************************************************ T37-m0370-5p 153 ************************************************************************************************************CGGGTCCCGCCTTGCATCAAC******************** T37-m0370-3p 216 --------------------TGGTGCAGGTCGGGAACC--------------------------------------------------------------------------------------------------------------- t0452945 2 --------------------TGGTGCAGGTCGGGAACCG-------------------------------------------------------------------------------------------------------------- t1558907 1 --------------------TGGTGCAGGTCGGGAACCGC------------------------------------------------------------------------------------------------------------- t0468612 2 --------------------TGGTGCAGGTCGGGAACCGCT------------------------------------------------------------------------------------------------------------ t0006487 95 --------------------TGGTGCAGGTCGGGAACCGCTT----------------------------------------------------------------------------------------------------------- t0014598 47 ---------------------GGTGCAGGTCGGGAACCGCTT----------------------------------------------------------------------------------------------------------- t0145226 6 --------------------------------------------------------------GGGCCTATGAGCTAGGTGGCT------------------------------------------------------------------ t0496936 2 -----------------------------------------------------------------------------------------------------------ACGGGTCCCGCCTTGCATCAA--------------------- t0176108 5 -----------------------------------------------------------------------------------------------------------ACGGGTCCCGCCTTGCATCAAC-------------------- t0424588 2 ------------------------------------------------------------------------------------------------------------CGGGTCCCGCCTTGCATCAA--------------------- t0047614 16 ------------------------------------------------------------------------------------------------------------CGGGTCCCGCCTTGCATCAAC-------------------- t0002851 193 // novel558 T37-m0378 scaffold51.0:1029861:1029943:+ 83(nt) -28.60(kcal/mol) TCGGATATTTTAACCGTTAGATCTTTGTTTGAAAATACAAAAATAAAGATCTAAAAACGGTTAAAACACCTAAAGTATCTGAT T37-m0378 28 ((((((((((((((((((((((((((((((..........)))))))))))))...))))))))).........)))))))). **********TAACCGTTAGATCTTTGTTTGAA************************************************** T37-m0378-5p 22 ***************************************AAAATAAAGATCTAAAAACGGTTAAA****************** T37-m0378-3p 5 -------TTTTAACCGTTAGATCTTTGTTT----------------------------------------------------- t2948559 1 ---------TTAACCGTTAGATCTTTGTT------------------------------------------------------ t1006409 1 ---------TTAACCGTTAGATCTTTGTTTGAA-------------------------------------------------- t0154985 6 ----------TAACCGTTAGATCTTTGTTTGAA-------------------------------------------------- t0117397 7 ----------TAACCGTTAGATCTTTGTTTGAAA------------------------------------------------- t0134680 7 ------------------------------------ACAAAAATAAAGATCTAAAAACGG----------------------- t3954317 1 --------------------------------------AAAAATAAAGATCTAAAAACGGTT--------------------- t0412179 3 ----------------------------------------AAATAAAGATCTAAAAACGGTTAA------------------- t2226912 1 --------------------------------------------AAAGATCTAAAAACGGTTAAAACA--------------- t3967308 1 // novel564 T37-m0389 scaffold551.0:29882:29991:- 110(nt) -46.10(kcal/mol) CAGCACATCCGGGTCGTTGAAATTTGATCCAACGGCTCTAAATAGGGAGCCCCTTTAAAAGTTATAATAATTGTAATCGTTAGATCAAGTTTGAACGGCCCGAATGGGCT T37-m0389 26 .(((.(((.(((((((((.((((((((((.(((((((((......)))))).........((((((.....)))))).))).)))))))))).))))))))).))).))) *************TCGTTGAAATTTGATCCAACG**************************************************************************** T37-m0389-5p 1 *******************************************************************************TTAGATCAAGTTTGAACGGCC********** T37-m0389-3p 24 ---------------GTTGAAATTTGATCCAACGGCTC------------------------------------------------------------------------ t2152338 1 ---------------------------------------------------------AAAGTTATAATAATTGTAATCGTT----------------------------- t2247394 1 -----------------------------------------------------------------------------CGTTAGATCAAGTTTGAACGGCC---------- t2822639 1 -------------------------------------------------------------------------------TTAGATCAAGTTTGAACGGCC---------- t0096883 9 -------------------------------------------------------------------------------TTAGATCAAGTTTGAACGGCCC--------- t0442278 2 -------------------------------------------------------------------------------TTAGATCAAGTTTGAACGGCCCG-------- t2644596 1 --------------------------------------------------------------------------------TAGATCAAGTTTGAACGGCCCGAA------ t0550108 2 ---------------------------------------------------------------------------------AGATCAAGTTTGAACGGCC---------- t1192247 1 ---------------------------------------------------------------------------------AGATCAAGTTTGAACGGCCCGAAT----- t0108660 8 // novel566 T37-m0392 scaffold566.0:149932:150152:+ 221(nt) -61.00(kcal/mol) AGGCACGTGCCTGCGCGTGGGGGTGCGTGCGGCGGTGAAAAATTATTTTAAAAATTTGGGGATGTTCGTGAGGTTGAGTAGATCACGTTGGTGTATTCATACACCCCATTTGAGCATTGTATGAGAAGTTATTTCTAAAGTTTGGTTATGTGCTTTAAACTTAACGTTTTTATAGTTATTTCGCATATAGGTGAGACGTATCCCGAGGACAAGCGTGGTCA T37-m0392 32 .(((.(((((.((..(.(.(((((((((.((.(.((((((....................((((((((((.(((((((((.(((.....))).))))))...))).)))..))))))).((((((((((((....((((((..........))))))....)))).))))))))....)))))).....).))..))))))))).).).)).)))))))). *************CGCGTGGGGGTGCGTGCGGCGGT***************************************************************************************************************************************************************************************** T37-m0392-5p 1 ********************************************************************************************************************************************************************************************AGGTGAGACGTATCCCGAGGACA********** T37-m0392-3p 30 ------------GCGCGTGGGGGTGCGTGCGGCGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3140988 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTCGCATATAGGTGAGACGTAT-------------------- t2818671 1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGGTGAGACGTATCCCGAGGAC----------- t0288812 3 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAGGTGAGACGTATCCCGAGGACA---------- t2141976 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTGAGACGTATCCCGAGGACA---------- t0035389 21 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTGAGACGTATCCCGAGGACA---------- t2426439 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAGACGTATCCCGAGGACA---------- t0432087 2 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACGTATCCCGAGGACA---------- t0482225 2 // novel615 T37-m0498 scaffold88.0:196339:196591:+ 253(nt) -57.10(kcal/mol) GTAATGCACCTGCCACATTTCAAAGATGCATGATGAGCATATTTTCCGATTATGTTGAGAAAATAATTGAAGTTTTTATGGATGATTTCAGTGTCTTTGGAGATTCCTTTGATGGTTGCTTGCATAATCTAAGTTTGATTCTAAAACGTTGTGTTGAAACTAACCTTGTTCTTAATTGGGAAAAATGTCATTTCATGGTTAAACAAGGCATAGTTTTAAGTCATATCATCTCTGAAAACGGCATTAAAGTTGA T37-m0498 123 .((((.....((((...(((((.(((((.(((((..(((((......((((((((.((((.....(((((((((.........))))))))).))))..(((...((......))...)))))))))))...((((.......))))..)))))((((((((.(((((((..(((((..((((.......))))..))))))))))))..)))))))).)))))..))))).)))))..)))).....)))). ************CCACATTTCAAAGATGCATGAT*************************************************************************************************************************************************************************************************************************** T37-m0498-5p 1 *****************************************************************************************************************************************************************************************************************************CATATCATCTCTGAAAACGGCA********** T37-m0498-3p 118 ------------CCACATTTCAAAGATGCATGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTTCATGGTTAAACAAGGCA------------------------------------------- t ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTAAACAAGGCATAGTTTT------------------------------------ t ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATATCATCTCTGAAAACGG------------ t ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATATCATCTCTGAAAACGGC----------- t ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATATCATCTCTGAAAACGGCAT--------- t -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATCATCTCTGAAAACGG------------ t -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATCATCTCTGAAAACGGCA---------- t -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATCATCTCTGAAAACGGCAT--------- t -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCATCTCTGAAAACGGCAT--------- t -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCATCTCTGAAAACGGCATT-------- t ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATCTCTGAAAACGGCATT-------- t // novel1 T24-m0001 scaffold1.0:124796:124905:+ 110(nt) -46.50(kcal/mol) CACGAAATCCAGACCGTTCAATTTTAATCCAACGGCTCTAAACAGAGGGTCTCCAAAAAGGTTATAATAATTGTAACCGTTGGATTAAAATTGAACGGCCCGAATTTCGT T24-m0001 2692 .(((((((.(.(.((((((((((((((((((((((((((......))))))........(((((((.....))))))))))))))))))))))))))).).).))))))) *************CCGTTCAATTTTAATCCAACG**************************************************************************** T24-m0001-5p 11 *******************************************************************************TTGGATTAAAATTGAACGGCC********** T24-m0001-3p 2622 ---------------GTTCAATTTTAATCCAACGGCTCT----------------------------------------------------------------------- t0853795 2 ----------------TTCAATTTTAATCCAACGGCT------------------------------------------------------------------------- t0154984 9 -----------------TCAATTTTAATCCAACGGCTCTAA--------------------------------------------------------------------- t3141720 1 ------------------CAATTTTAATCCAACGGCTCTAA--------------------------------------------------------------------- t0851834 2 -------------------AATTTTAATCCAACGGCTCTAAAC------------------------------------------------------------------- t0188939 7 --------------------ATTTTAATCCAACGGCTCTAAAC------------------------------------------------------------------- t0898066 2 -------------------------AATCCAACGGCTCTAAACAGAGGG------------------------------------------------------------- t0719580 2 ---------------------------------------------------------------ATAATAATTGTAACCGTTGGATT------------------------ t0954109 2 ---------------------------------------------------------------ATAATAATTGTAACCGTTGGATTA----------------------- t2680116 1 -----------------------------------------------------------------AATAATTGTAACCGTTGGATTAAA--------------------- t0048380 23 ------------------------------------------------------------------ATAATTGTAACCGTTGGATTAA---------------------- t0864543 2 ------------------------------------------------------------------ATAATTGTAACCGTTGGATTAAAA-------------------- t3988174 1 --------------------------------------------------------------------AATTGTAACCGTTGGATTAAAAT------------------- t4213421 1 --------------------------------------------------------------------AATTGTAACCGTTGGATTAAAATT------------------ t2380288 1 ----------------------------------------------------------------------TTGTAACCGTTGGATTAAA--------------------- t4138815 1 --------------------------------------------------------------------------AACCGTTGGATTAAAATTGAACGG------------ t0753671 2 ---------------------------------------------------------------------------ACCGTTGGATTAAAATTGAACGGC----------- t0121797 11 ----------------------------------------------------------------------------CCGTTGGATTAAAATTGAACGGC----------- t0192783 7 ----------------------------------------------------------------------------CCGTTGGATTAAAATTGAACGGCC---------- t0029077 35 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGG------------ t0285157 5 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGGCCC--------- t3439169 1 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGC----------- t0154784 9 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCC--------- t3776071 1 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCCG-------- t3278102 1 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGC----------- t0148569 9 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCC---------- t0000166 2200 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCC--------- t0636808 3 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCGA------- t5297553 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCC---------- t4058380 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCC--------- t0001612 328 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCG-------- t3069810 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCGA------- t2003684 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCGAA------ t0078515 15 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCC--------- t1833637 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCG-------- t2759416 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCGAAT----- t0825854 2 // T24-m0283 scaffold404.0:200279:200388:+ 110(nt) -45.90(kcal/mol) CACGAAATTCAGACCGTTCAATTTTAATCCAACGGCTTTAAACAAGGGGTCCCCTAAAAAGTTATAATAATTGCAACTGTTGGATTAAAATTGAACGGCCCGGATTTCGT T24-m0283 2783 .(((((((((.(.((((((((((((((((((((((.........((((...)))).....((..........))..)))))))))))))))))))))).).))))))))) *************CCGTTCAATTTTAATCCAACG**************************************************************************** T24-m0283-5p 9 *******************************************************************************TTGGATTAAAATTGAACGGCC********** T24-m0283-3p 2668 ----------------TTCAATTTTAATCCAACGGCT------------------------------------------------------------------------- t0154984 9 -----------------------------------------------------------AGTTATAATAATTGCAACTGTTGG--------------------------- t0484873 3 ------------------------------------------------------------GTTATAATAATTGCAACTGTTGGA-------------------------- t2747190 1 -------------------------------------------------------------TTATAATAATTGCAACTGTTGGA-------------------------- t2724444 1 --------------------------------------------------------------TATAATAATTGCAACTGTTGGAT------------------------- t1672490 1 ---------------------------------------------------------------ATAATAATTGCAACTGTTGGATTA----------------------- t4746229 1 -----------------------------------------------------------------AATAATTGCAACTGTTGGATTA----------------------- t1508583 1 -----------------------------------------------------------------AATAATTGCAACTGTTGGATTAAA--------------------- t0525801 3 ---------------------------------------------------------------------ATTGCAACTGTTGGATTAAAAT------------------- t3690879 1 ---------------------------------------------------------------------ATTGCAACTGTTGGATTAAAATTG----------------- t0877662 2 -----------------------------------------------------------------------TGCAACTGTTGGATTAAAATTGAA--------------- t2044687 1 --------------------------------------------------------------------------AACTGTTGGATTAAAATTGAACGG------------ t5380885 1 ---------------------------------------------------------------------------ACTGTTGGATTAAAATTGAACGGC----------- t0233703 6 ----------------------------------------------------------------------------CTGTTGGATTAAAATTGAACGGCC---------- t2954940 1 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGC----------- t0154784 9 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCC--------- t3776071 1 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCCG-------- t3278102 1 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGC----------- t0148569 9 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCC---------- t0000166 2200 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCC--------- t0636808 3 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCGG------- t0011246 74 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCC---------- t4058380 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCC--------- t0001612 328 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCG-------- t3069810 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCGGA------ t0061129 19 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCGGAT----- t1767373 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCC--------- t1833637 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCG-------- t2759416 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCGG------- t4892999 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCGGA------ t1085923 2 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCGGAT----- t0396897 4 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCGGATT---- t4232348 1 ----------------------------------------------------------------------------------GATTAAAATTGAACGGCCCGG------- t0134795 10 -----------------------------------------------------------------------------------ATTAAAATTGAACGGCCCGG------- t3254515 1 -----------------------------------------------------------------------------------ATTAAAATTGAACGGCCCGGA------ t0248151 6 ------------------------------------------------------------------------------------TTAAAATTGAACGGCCCGG------- t4156598 1 ------------------------------------------------------------------------------------TTAAAATTGAACGGCCCGGA------ t0509716 3 ------------------------------------------------------------------------------------TTAAAATTGAACGGCCCGGAT----- t0017068 54 ------------------------------------------------------------------------------------TTAAAATTGAACGGCCCGGATT---- t3455175 1 ------------------------------------------------------------------------------------TTAAAATTGAACGGCCCGGATTTC-- t4153268 1 -------------------------------------------------------------------------------------TAAAATTGAACGGCCCGGAT----- t0807505 2 -------------------------------------------------------------------------------------TAAAATTGAACGGCCCGGATT---- t5404468 1 --------------------------------------------------------------------------------------AAAATTGAACGGCCCGGATTT--- t4244976 1 ---------------------------------------------------------------------------------------AAATTGAACGGCCCGGATTTC-- t0377221 4 ----------------------------------------------------------------------------------------AATTGAACGGCCCGGATTTCG- t0146365 9 // T24-m0285 scaffold408.0:138866:138975:- 110(nt) -47.40(kcal/mol) CACGAAATCCGGATCGTTCAATTTTAATCCAACGGCTCTAAACAGGGGGTCTCCTAAAAAGTTATAATAATTGTAACCGTTGGATTAAAATTGAACGGCCCAGATTTTGT T24-m0285 2704 .((((((((.((..(((((((((((((((((((((((((......)))))).........((((((.....)))))).)))))))))))))))))))..)).)))))))) *************TCGTTCAATTTTAATCCAACG**************************************************************************** T24-m0285-5p 11 *******************************************************************************TTGGATTAAAATTGAACGGCC********** T24-m0285-3p 2629 -ACGAAATCCGGATCGTTCAATTTT------------------------------------------------------------------------------------- t0940235 2 --CGAAATCCGGATCGTTCAATTTTA------------------------------------------------------------------------------------ t5307812 1 -----AATCCGGATCGTTCAATTTTAATC--------------------------------------------------------------------------------- t2245204 1 ---------------GTTCAATTTTAATCCAACGGCTCT----------------------------------------------------------------------- t0853795 2 ----------------TTCAATTTTAATCCAACGGCT------------------------------------------------------------------------- t0154984 9 -----------------TCAATTTTAATCCAACGGCTCTAA--------------------------------------------------------------------- t3141720 1 ------------------CAATTTTAATCCAACGGCTCTAA--------------------------------------------------------------------- t0851834 2 -------------------AATTTTAATCCAACGGCTCTAAAC------------------------------------------------------------------- t0188939 7 --------------------ATTTTAATCCAACGGCTCTAAAC------------------------------------------------------------------- t0898066 2 -------------------------AATCCAACGGCTCTAAACAGG---------------------------------------------------------------- t2540110 1 -------------------------AATCCAACGGCTCTAAACAGGGGG------------------------------------------------------------- t0918272 2 ---------------------------------------------------------------ATAATAATTGTAACCGTTGGATT------------------------ t0954109 2 ---------------------------------------------------------------ATAATAATTGTAACCGTTGGATTA----------------------- t2680116 1 -----------------------------------------------------------------AATAATTGTAACCGTTGGATTAAA--------------------- t0048380 23 ------------------------------------------------------------------ATAATTGTAACCGTTGGATTAA---------------------- t0864543 2 ------------------------------------------------------------------ATAATTGTAACCGTTGGATTAAAA-------------------- t3988174 1 --------------------------------------------------------------------AATTGTAACCGTTGGATTAAAAT------------------- t4213421 1 --------------------------------------------------------------------AATTGTAACCGTTGGATTAAAATT------------------ t2380288 1 ----------------------------------------------------------------------TTGTAACCGTTGGATTAAA--------------------- t4138815 1 --------------------------------------------------------------------------AACCGTTGGATTAAAATTGAACGG------------ t0753671 2 ---------------------------------------------------------------------------ACCGTTGGATTAAAATTGAACGGC----------- t0121797 11 ----------------------------------------------------------------------------CCGTTGGATTAAAATTGAACGGC----------- t0192783 7 ----------------------------------------------------------------------------CCGTTGGATTAAAATTGAACGGCC---------- t0029077 35 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGG------------ t0285157 5 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGGCCC--------- t3439169 1 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGC----------- t0154784 9 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCC--------- t3776071 1 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGC----------- t0148569 9 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCC---------- t0000166 2200 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCC--------- t0636808 3 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCA-------- t0115091 11 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCAG------- t0588941 3 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCC---------- t4058380 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCC--------- t0001612 328 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCA-------- t5171999 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCAG------- t4056555 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCAGA------ t0107431 12 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCC--------- t1833637 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCAGAT----- t4842077 1 // T24-m0292 scaffold414.0:82703:82812:- 110(nt) -41.80(kcal/mol) CACGAAATTCAGACCGTTCAATTTTAATCCAACGGCTTTAAACAGGGGGTTCCTTAAAAAGTTATAATAATTACAACCGTTGGATTAAAATTGAACGGCCCAGATTTTGT T24-m0292 2682 .((((((((..(.((((((((((((((((((((((........((((....))))....(((((...)))))....)))))))))))))))))))))).)..)))))))) *************CCGTTCAATTTTAATCCAACG**************************************************************************** T24-m0292-5p 9 *******************************************************************************TTGGATTAAAATTGAACGGCC********** T24-m0292-3p 2629 ----------------TTCAATTTTAATCCAACGGCT------------------------------------------------------------------------- t0154984 9 -----------------------------------------------------------AGTTATAATAATTACAACCGTT----------------------------- t1308102 1 -----------------------------------------------------------AGTTATAATAATTACAACCGTTGG--------------------------- t0356373 4 ------------------------------------------------------------GTTATAATAATTACAACCGTTGGA-------------------------- t0485717 3 -------------------------------------------------------------TTATAATAATTACAACCGTTGGAT------------------------- t0285432 5 ---------------------------------------------------------------ATAATAATTACAACCGTTGG--------------------------- t3860334 1 ----------------------------------------------------------------TAATAATTACAACCGTTGGATTA----------------------- t3749732 1 ----------------------------------------------------------------TAATAATTACAACCGTTGGATTAA---------------------- t0252272 6 -----------------------------------------------------------------AATAATTACAACCGTTGGATTAAA--------------------- t0276697 5 --------------------------------------------------------------------AATTACAACCGTTGGATTA----------------------- t2192344 1 --------------------------------------------------------------------AATTACAACCGTTGGATTAAAATT------------------ t1294195 1 ---------------------------------------------------------------------ATTACAACCGTTGGATTAAAA-------------------- t2408935 1 ---------------------------------------------------------------------ATTACAACCGTTGGATTAAAATTG----------------- t1118256 2 --------------------------------------------------------------------------AACCGTTGGATTAAAATTGAACGG------------ t0753671 2 ---------------------------------------------------------------------------ACCGTTGGATTAAAATTGAACGGC----------- t0121797 11 ----------------------------------------------------------------------------CCGTTGGATTAAAATTGAACGGC----------- t0192783 7 ----------------------------------------------------------------------------CCGTTGGATTAAAATTGAACGGCC---------- t0029077 35 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGG------------ t0285157 5 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGGCCC--------- t3439169 1 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGC----------- t0154784 9 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCC--------- t3776071 1 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGC----------- t0148569 9 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCC---------- t0000166 2200 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCC--------- t0636808 3 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCA-------- t0115091 11 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCAG------- t0588941 3 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCC---------- t4058380 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCC--------- t0001612 328 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCA-------- t5171999 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCAG------- t4056555 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCAGA------ t0107431 12 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCC--------- t1833637 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCAGAT----- t4842077 1 // mireap-plant T24-m0340 scaffold50.0:857101:857210:- 110(nt) -45.70(kcal/mol) CACAAAATTCAGACCGTTCAATTTTAATCCAACGGCTCTAAACAGGGGGTCCCCTAAAAAGTTATAATAATTGCAACCGTTGGATTAAAATTGAACGGCCCGAATTTCGT T24-m0340 2689 .((.((((((.(.((((((((((((((((((((((........((((....)))).....((..........))..)))))))))))))))))))))).).)))))).)) *************CCGTTCAATTTTAATCCAACG**************************************************************************** T24-m0340-5p 11 *******************************************************************************TTGGATTAAAATTGAACGGCC********** T24-m0340-3p 2622 ---------------GTTCAATTTTAATCCAACGGCTCT----------------------------------------------------------------------- t0853795 2 ----------------TTCAATTTTAATCCAACGGCT------------------------------------------------------------------------- t0154984 9 -----------------TCAATTTTAATCCAACGGCTCTAA--------------------------------------------------------------------- t3141720 1 ------------------CAATTTTAATCCAACGGCTCTAA--------------------------------------------------------------------- t0851834 2 -------------------AATTTTAATCCAACGGCTCTAAAC------------------------------------------------------------------- t0188939 7 --------------------ATTTTAATCCAACGGCTCTAAAC------------------------------------------------------------------- t0898066 2 -------------------------AATCCAACGGCTCTAAACAGG---------------------------------------------------------------- t2540110 1 -------------------------AATCCAACGGCTCTAAACAGGGGG------------------------------------------------------------- t0918272 2 --------------------------------CGGCTCTAAACAGGGGGTCCCCT------------------------------------------------------- t4627158 1 --------------------------------------------------------AAAAGTTATAATAATTGCAACCGT------------------------------ t2276601 1 -------------------------------------------------------------TTATAATAATTGCAACCGTTGGAT------------------------- t2818312 1 --------------------------------------------------------------TATAATAATTGCAACCGTTGGAT------------------------- t2747228 1 ---------------------------------------------------------------ATAATAATTGCAACCGTTGGA-------------------------- t2984505 1 ---------------------------------------------------------------ATAATAATTGCAACCGTTGGATT------------------------ t4722414 1 ---------------------------------------------------------------ATAATAATTGCAACCGTTGGATTA----------------------- t5462754 1 ----------------------------------------------------------------TAATAATTGCAACCGTTGGATTA----------------------- t2516800 1 ----------------------------------------------------------------TAATAATTGCAACCGTTGGATTAA---------------------- t0616403 3 ----------------------------------------------------------------TAATAATTGCAACCGTTGGATTAAA--------------------- t4752830 1 -----------------------------------------------------------------AATAATTGCAACCGTTGGATTA----------------------- t1779737 1 -----------------------------------------------------------------AATAATTGCAACCGTTGGATTAA---------------------- t4034325 1 -----------------------------------------------------------------AATAATTGCAACCGTTGGATTAAA--------------------- t0172476 8 ------------------------------------------------------------------ATAATTGCAACCGTTGGATTAAAA-------------------- t5042542 1 --------------------------------------------------------------------AATTGCAACCGTTGGATTAAAATT------------------ t0480945 3 ---------------------------------------------------------------------ATTGCAACCGTTGGATTAAAATT------------------ t4728417 1 -----------------------------------------------------------------------TGCAACCGTTGGATTAAAATTGAA--------------- t2478900 1 --------------------------------------------------------------------------AACCGTTGGATTAAAATTGAACGG------------ t0753671 2 ---------------------------------------------------------------------------ACCGTTGGATTAAAATTGAACGGC----------- t0121797 11 ----------------------------------------------------------------------------CCGTTGGATTAAAATTGAACGGC----------- t0192783 7 ----------------------------------------------------------------------------CCGTTGGATTAAAATTGAACGGCC---------- t0029077 35 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGG------------ t0285157 5 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGGCCC--------- t3439169 1 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGC----------- t0154784 9 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCC--------- t3776071 1 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCCG-------- t3278102 1 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGC----------- t0148569 9 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCC---------- t0000166 2200 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCC--------- t0636808 3 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCGA------- t5297553 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCC---------- t4058380 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCC--------- t0001612 328 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCG-------- t3069810 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCGA------- t2003684 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCGAA------ t0078515 15 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCC--------- t1833637 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCG-------- t2759416 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCGAAT----- t0825854 2 // T37-m0001 scaffold1.0:124796:124905:+ 110(nt) -46.50(kcal/mol) CACGAAATCCAGACCGTTCAATTTTAATCCAACGGCTCTAAACAGAGGGTCTCCAAAAAGGTTATAATAATTGTAACCGTTGGATTAAAATTGAACGGCCCGAATTTCGT T37-m0001 2964 .(((((((.(.(.((((((((((((((((((((((((((......))))))........(((((((.....))))))))))))))))))))))))))).).).))))))) *************CCGTTCAATTTTAATCCAACG**************************************************************************** T37-m0001-5p 14 *******************************************************************************TTGGATTAAAATTGAACGGCC********** T37-m0001-3p 2908 ---------CAGACCGTTCAATTTTAATCCAAC----------------------------------------------------------------------------- t3762297 1 ----------------TTCAATTTTAATCCAACGGCT------------------------------------------------------------------------- t0058569 14 -----------------TCAATTTTAATCCAACGGCTC------------------------------------------------------------------------ t0373913 3 -----------------TCAATTTTAATCCAACGGCTCTAA--------------------------------------------------------------------- t3609154 1 ------------------CAATTTTAATCCAACGGCTC------------------------------------------------------------------------ t0995572 1 -------------------AATTTTAATCCAACGGCTCTA---------------------------------------------------------------------- t1911338 1 -------------------AATTTTAATCCAACGGCTCTAAAC------------------------------------------------------------------- t0240555 4 --------------------ATTTTAATCCAACGGCTCTAAAC------------------------------------------------------------------- t3375181 1 ---------------------TTTTAATCCAACGGCTCTA---------------------------------------------------------------------- t1683154 1 ---------------------TTTTAATCCAACGGCTCTAAA-------------------------------------------------------------------- t1690489 1 ---------------------TTTTAATCCAACGGCTCTAAACA------------------------------------------------------------------ t3391604 1 ---------------------TTTTAATCCAACGGCTCTAAACAG----------------------------------------------------------------- t3731075 1 ---------------------------------------------------------------ATAATAATTGTAACCGTTGGATTA----------------------- t0683683 2 -----------------------------------------------------------------AATAATTGTAACCGTTGGATTAA---------------------- t0331805 3 -----------------------------------------------------------------AATAATTGTAACCGTTGGATTAAA--------------------- t0066765 12 --------------------------------------------------------------------AATTGTAACCGTTGGATTAAAATT------------------ t0628453 2 --------------------------------------------------------------------------AACCGTTGGATTAAAATTGAACGGC----------- t2835712 1 ---------------------------------------------------------------------------ACCGTTGGATTAAAATTGAACGGC----------- t0162624 6 ----------------------------------------------------------------------------CCGTTGGATTAAAATTGAACGGCC---------- t0030964 24 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGG------------ t0706896 2 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGGCC---------- t3671439 1 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGGCCC--------- t0888336 1 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGC----------- t0043754 18 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCC--------- t0220875 4 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCCG-------- t3810417 1 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGC----------- t0042037 18 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCC---------- t0000152 2432 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCC--------- t0132117 7 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCG-------- t0545455 2 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCGA------- t3632002 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGC----------- t0742953 2 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCC---------- t0322762 3 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCC--------- t0001274 376 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCG-------- t0755707 2 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCGAA------ t0082744 10 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCC---------- t2703579 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCC--------- t1677091 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCGAAT----- t0643085 2 // T37-m0321 scaffold404.0:200279:200388:+ 110(nt) -45.90(kcal/mol) CACGAAATTCAGACCGTTCAATTTTAATCCAACGGCTTTAAACAAGGGGTCCCCTAAAAAGTTATAATAATTGCAACTGTTGGATTAAAATTGAACGGCCCGGATTTCGT T37-m0321 3154 .(((((((((.(.((((((((((((((((((((((.........((((...)))).....((..........))..)))))))))))))))))))))).).))))))))) *************CCGTTCAATTTTAATCCAACG**************************************************************************** T37-m0321-5p 14 *******************************************************************************TTGGATTAAAATTGAACGGCC********** T37-m0321-3p 3006 --CGAAATTCAGACCGTTCAA----------------------------------------------------------------------------------------- t1591940 1 ---------CAGACCGTTCAATTTTAATCCAAC----------------------------------------------------------------------------- t3762297 1 ----------------TTCAATTTTAATCCAACGGCT------------------------------------------------------------------------- t0058569 14 ------------------CAATTTTAATCCAACGGCTT------------------------------------------------------------------------ t0839599 1 ---------------------------------------------------------------------ATTGCAACTGTTGGATTAAAA-------------------- t1789653 1 -----------------------------------------------------------------------TGCAACTGTTGGATTAAAATTGA---------------- t1200293 1 -----------------------------------------------------------------------TGCAACTGTTGGATTAAAATTGAA--------------- t0566342 2 --------------------------------------------------------------------------AACTGTTGGATTAAAATTGAACGG------------ t3755517 1 ---------------------------------------------------------------------------ACTGTTGGATTAAAATTGAACGGC----------- t0749620 2 ----------------------------------------------------------------------------CTGTTGGATTAAAATTGAACGGC----------- t1288235 1 ----------------------------------------------------------------------------CTGTTGGATTAAAATTGAACGGCC---------- t3332912 1 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGC----------- t0043754 18 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCC--------- t0220875 4 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCCG-------- t3810417 1 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGC----------- t0042037 18 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCC---------- t0000152 2432 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCC--------- t0132117 7 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCG-------- t0545455 2 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCGG------- t0007242 86 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCGGA------ t0402292 3 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGC----------- t0742953 2 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCC---------- t0322762 3 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCC--------- t0001274 376 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCG-------- t0755707 2 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCGG------- t3646362 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCGGA------ t0035539 21 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCGGAT----- t1579623 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCC---------- t2703579 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCC--------- t1677091 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCGGAT----- t0174178 5 ----------------------------------------------------------------------------------GATTAAAATTGAACGGCCCGG------- t0049500 16 ----------------------------------------------------------------------------------GATTAAAATTGAACGGCCCGGAT----- t0221342 4 -----------------------------------------------------------------------------------ATTAAAATTGAACGGCCCGG------- t0410379 3 -----------------------------------------------------------------------------------ATTAAAATTGAACGGCCCGGA------ t0048893 16 ------------------------------------------------------------------------------------TTAAAATTGAACGGCCCGGA------ t0252648 4 ------------------------------------------------------------------------------------TTAAAATTGAACGGCCCGGAT----- t0008954 72 ------------------------------------------------------------------------------------TTAAAATTGAACGGCCCGGATT---- t0431247 2 ------------------------------------------------------------------------------------TTAAAATTGAACGGCCCGGATTT--- t2413311 1 -------------------------------------------------------------------------------------TAAAATTGAACGGCCCGGA------ t2199047 1 -------------------------------------------------------------------------------------TAAAATTGAACGGCCCGGATT---- t0135045 7 -------------------------------------------------------------------------------------TAAAATTGAACGGCCCGGATTTC-- t1781370 1 --------------------------------------------------------------------------------------AAAATTGAACGGCCCGGATTT--- t0577312 2 ---------------------------------------------------------------------------------------AAATTGAACGGCCCGGATTTC-- t0399778 3 ---------------------------------------------------------------------------------------AAATTGAACGGCCCGGATTTCGT t1080958 1 ----------------------------------------------------------------------------------------AATTGAACGGCCCGGATTTCG- t0078360 11 // T37-m0322 scaffold408.0:138866:138975:- 110(nt) -47.40(kcal/mol) CACGAAATCCGGATCGTTCAATTTTAATCCAACGGCTCTAAACAGGGGGTCTCCTAAAAAGTTATAATAATTGTAACCGTTGGATTAAAATTGAACGGCCCAGATTTTGT T37-m0322 2979 .((((((((.((..(((((((((((((((((((((((((......)))))).........((((((.....)))))).)))))))))))))))))))..)).)))))))) *************TCGTTCAATTTTAATCCAACG**************************************************************************** T37-m0322-5p 14 *******************************************************************************TTGGATTAAAATTGAACGGCC********** T37-m0322-3p 2922 -ACGAAATCCGGATCGTTCAATT--------------------------------------------------------------------------------------- t1242916 1 ----------------TTCAATTTTAATCCAACGGCT------------------------------------------------------------------------- t0058569 14 -----------------TCAATTTTAATCCAACGGCTC------------------------------------------------------------------------ t0373913 3 -----------------TCAATTTTAATCCAACGGCTCTAA--------------------------------------------------------------------- t3609154 1 ------------------CAATTTTAATCCAACGGCTC------------------------------------------------------------------------ t0995572 1 -------------------AATTTTAATCCAACGGCTCTA---------------------------------------------------------------------- t1911338 1 -------------------AATTTTAATCCAACGGCTCTAAAC------------------------------------------------------------------- t0240555 4 --------------------ATTTTAATCCAACGGCTCTAAAC------------------------------------------------------------------- t3375181 1 ---------------------TTTTAATCCAACGGCTCTA---------------------------------------------------------------------- t1683154 1 ---------------------TTTTAATCCAACGGCTCTAAA-------------------------------------------------------------------- t1690489 1 ---------------------TTTTAATCCAACGGCTCTAAACA------------------------------------------------------------------ t3391604 1 ---------------------TTTTAATCCAACGGCTCTAAACAG----------------------------------------------------------------- t3731075 1 ---------------------------------------------------------------ATAATAATTGTAACCGTTGGATTA----------------------- t0683683 2 -----------------------------------------------------------------AATAATTGTAACCGTTGGATTAA---------------------- t0331805 3 -----------------------------------------------------------------AATAATTGTAACCGTTGGATTAAA--------------------- t0066765 12 --------------------------------------------------------------------AATTGTAACCGTTGGATTAAAATT------------------ t0628453 2 --------------------------------------------------------------------------AACCGTTGGATTAAAATTGAACGGC----------- t2835712 1 ---------------------------------------------------------------------------ACCGTTGGATTAAAATTGAACGGC----------- t0162624 6 ----------------------------------------------------------------------------CCGTTGGATTAAAATTGAACGGCC---------- t0030964 24 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGG------------ t0706896 2 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGGCC---------- t3671439 1 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGGCCC--------- t0888336 1 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGC----------- t0043754 18 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCC--------- t0220875 4 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCCA-------- t0617871 2 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGC----------- t0042037 18 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCC---------- t0000152 2432 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCC--------- t0132117 7 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCA-------- t0046786 17 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCAG------- t0329333 3 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGC----------- t0742953 2 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCC---------- t0322762 3 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCC--------- t0001274 376 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCAGA------ t0107808 8 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCC---------- t2703579 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCC--------- t1677091 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCAGAT----- t2959127 1 ----------------------------------------------------------------------------------GATTAAAATTGAACGGCCCAGATT---- t2479677 1 ------------------------------------------------------------------------------------TTAAAATTGAACGGCCCAGAT----- t2194516 1 // T37-m0326 scaffold414.0:82703:82812:- 110(nt) -41.80(kcal/mol) CACGAAATTCAGACCGTTCAATTTTAATCCAACGGCTTTAAACAGGGGGTTCCTTAAAAAGTTATAATAATTACAACCGTTGGATTAAAATTGAACGGCCCAGATTTTGT T37-m0326 2969 .((((((((..(.((((((((((((((((((((((........((((....))))....(((((...)))))....)))))))))))))))))))))).)..)))))))) *************CCGTTCAATTTTAATCCAACG**************************************************************************** T37-m0326-5p 14 *******************************************************************************TTGGATTAAAATTGAACGGCC********** T37-m0326-3p 2922 --CGAAATTCAGACCGTTCAA----------------------------------------------------------------------------------------- t1591940 1 ---------CAGACCGTTCAATTTTAATCCAAC----------------------------------------------------------------------------- t3762297 1 ----------------TTCAATTTTAATCCAACGGCT------------------------------------------------------------------------- t0058569 14 ------------------CAATTTTAATCCAACGGCTT------------------------------------------------------------------------ t0839599 1 -----------------------------------------------------------AGTTATAATAATTACAACCGTTGG--------------------------- t0347973 3 ------------------------------------------------------------GTTATAATAATTACAACCGTTGGA-------------------------- t0580381 2 -------------------------------------------------------------TTATAATAATTACAACCGTTGGAT------------------------- t0710235 2 ---------------------------------------------------------------ATAATAATTACAACCGTTGG--------------------------- t1509854 1 ---------------------------------------------------------------ATAATAATTACAACCGTTGGA-------------------------- t1491951 1 ---------------------------------------------------------------ATAATAATTACAACCGTTGGATTA----------------------- t3687140 1 -----------------------------------------------------------------AATAATTACAACCGTTGGATTA----------------------- t0782103 2 -----------------------------------------------------------------AATAATTACAACCGTTGGATTAA---------------------- t1152491 1 -----------------------------------------------------------------AATAATTACAACCGTTGGATTAAA--------------------- t0242046 4 -------------------------------------------------------------------TAATTACAACCGTTGGATT------------------------ t3698521 1 --------------------------------------------------------------------AATTACAACCGTTGGATTAA---------------------- t3142893 1 --------------------------------------------------------------------AATTACAACCGTTGGATTAAAATT------------------ t0880546 1 -----------------------------------------------------------------------TACAACCGTTGGATTAAAATTGAA--------------- t2582689 1 -------------------------------------------------------------------------CAACCGTTGGATTAAAATTGA---------------- t3252873 1 --------------------------------------------------------------------------AACCGTTGGATTAAAATTGAACGGC----------- t2835712 1 ---------------------------------------------------------------------------ACCGTTGGATTAAAATTGAACGGC----------- t0162624 6 ----------------------------------------------------------------------------CCGTTGGATTAAAATTGAACGGCC---------- t0030964 24 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGG------------ t0706896 2 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGGCC---------- t3671439 1 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGGCCC--------- t0888336 1 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGC----------- t0043754 18 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCC--------- t0220875 4 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCCA-------- t0617871 2 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGC----------- t0042037 18 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCC---------- t0000152 2432 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCC--------- t0132117 7 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCA-------- t0046786 17 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCAG------- t0329333 3 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGC----------- t0742953 2 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCC---------- t0322762 3 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCC--------- t0001274 376 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCAGA------ t0107808 8 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCC---------- t2703579 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCC--------- t1677091 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCAGAT----- t2959127 1 ----------------------------------------------------------------------------------GATTAAAATTGAACGGCCCAGATT---- t2479677 1 ------------------------------------------------------------------------------------TTAAAATTGAACGGCCCAGAT----- t2194516 1 // T37-m0373 scaffold50.0:857101:857210:- 110(nt) -45.70(kcal/mol) CACAAAATTCAGACCGTTCAATTTTAATCCAACGGCTCTAAACAGGGGGTCCCCTAAAAAGTTATAATAATTGCAACCGTTGGATTAAAATTGAACGGCCCGAATTTCGT T37-m0373 2969 .((.((((((.(.((((((((((((((((((((((........((((....)))).....((..........))..)))))))))))))))))))))).).)))))).)) *************CCGTTCAATTTTAATCCAACG**************************************************************************** T37-m0373-5p 14 *******************************************************************************TTGGATTAAAATTGAACGGCC********** T37-m0373-3p 2908 ---AAAATTCAGACCGTTCAATTTTAA----------------------------------------------------------------------------------- t3209400 1 ---------CAGACCGTTCAATTTTAATCCAAC----------------------------------------------------------------------------- t3762297 1 ----------------TTCAATTTTAATCCAACGGCT------------------------------------------------------------------------- t0058569 14 -----------------TCAATTTTAATCCAACGGCTC------------------------------------------------------------------------ t0373913 3 -----------------TCAATTTTAATCCAACGGCTCTAA--------------------------------------------------------------------- t3609154 1 ------------------CAATTTTAATCCAACGGCTC------------------------------------------------------------------------ t0995572 1 -------------------AATTTTAATCCAACGGCTCTA---------------------------------------------------------------------- t1911338 1 -------------------AATTTTAATCCAACGGCTCTAAAC------------------------------------------------------------------- t0240555 4 --------------------ATTTTAATCCAACGGCTCTAAAC------------------------------------------------------------------- t3375181 1 ---------------------TTTTAATCCAACGGCTCTA---------------------------------------------------------------------- t1683154 1 ---------------------TTTTAATCCAACGGCTCTAAA-------------------------------------------------------------------- t1690489 1 ---------------------TTTTAATCCAACGGCTCTAAACA------------------------------------------------------------------ t3391604 1 ---------------------TTTTAATCCAACGGCTCTAAACAG----------------------------------------------------------------- t3731075 1 -----------------------------------------------------------AGTTATAATAATTGCAACCGTTGG--------------------------- t1694668 1 --------------------------------------------------------------TATAATAATTGCAACCGTTGG--------------------------- t3206018 1 ---------------------------------------------------------------ATAATAATTGCAACCGTTGGA-------------------------- t3376561 1 ---------------------------------------------------------------ATAATAATTGCAACCGTTGGATTA----------------------- t0802468 2 ----------------------------------------------------------------TAATAATTGCAACCGTTGGATTAA---------------------- t2745884 1 ----------------------------------------------------------------TAATAATTGCAACCGTTGGATTAAA--------------------- t2827674 1 -----------------------------------------------------------------AATAATTGCAACCGTTGGATTA----------------------- t0517116 2 -----------------------------------------------------------------AATAATTGCAACCGTTGGATTAA---------------------- t0538267 2 -----------------------------------------------------------------AATAATTGCAACCGTTGGATTAAA--------------------- t0321181 3 -------------------------------------------------------------------TAATTGCAACCGTTGGATTAAAAT------------------- t0508107 2 --------------------------------------------------------------------AATTGCAACCGTTGGATTAAAATT------------------ t0233849 4 ---------------------------------------------------------------------ATTGCAACCGTTGGATTAAAATT------------------ t2791988 1 ----------------------------------------------------------------------TTGCAACCGTTGGATTAAAATTGA---------------- t3610907 1 -------------------------------------------------------------------------CAACCGTTGGATTAAAATTGA---------------- t3252873 1 --------------------------------------------------------------------------AACCGTTGGATTAAAATTGAACGGC----------- t2835712 1 ---------------------------------------------------------------------------ACCGTTGGATTAAAATTGAACGGC----------- t0162624 6 ----------------------------------------------------------------------------CCGTTGGATTAAAATTGAACGGCC---------- t0030964 24 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGG------------ t0706896 2 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGGCC---------- t3671439 1 -----------------------------------------------------------------------------CGTTGGATTAAAATTGAACGGCCC--------- t0888336 1 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGC----------- t0043754 18 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCC--------- t0220875 4 ------------------------------------------------------------------------------GTTGGATTAAAATTGAACGGCCCG-------- t3810417 1 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGC----------- t0042037 18 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCC---------- t0000152 2432 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCC--------- t0132117 7 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCG-------- t0545455 2 -------------------------------------------------------------------------------TTGGATTAAAATTGAACGGCCCGA------- t3632002 1 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGC----------- t0742953 2 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCC---------- t0322762 3 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCC--------- t0001274 376 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCG-------- t0755707 2 --------------------------------------------------------------------------------TGGATTAAAATTGAACGGCCCGAA------ t0082744 10 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCC---------- t2703579 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCC--------- t1677091 1 ---------------------------------------------------------------------------------GGATTAAAATTGAACGGCCCGAAT----- t0643085 2 // novetl_mir_157 T24-m0188 scaffold266.0:262299:262521:+ 223(nt) -102.10(kcal/mol) ACTGCATTTTCCGAAAATAATGCATCTTCAACGTGGTGTTTGGATGAACGTGTTAAGATCCTACAAATGAAAATATTTCTACAAGGTGAATCACTCGGAAGTACAAAATCAGAGGAAAATTTTTGGTACTTCTCATACTTTTGAGGGGTTCATCTTGTTGTAAGATCTTAATAAGTTCATCCAAACACCATATTGAGGATGCATAGTTTTCAGAAAATACAAT T24-m0188 25264 ..((.((((((.((((((.((((((((((((..((((((((((((((((.((((((((((.((((...(((.....))).((((((((((((.((((((((((....((((((((....))))))))........)))))))))).)))))))))))))))).)))))))))).))))))))))))))))..)))))))))))).)))))).)))))).)).. ************GAAAATAATGCATCTTCAACG********************************************************************************************************************************************************************************************** T24-m0188-5p 15 ************************************************************************************************************************************************************************************************TTGAGGATGCATAGTTTTCAG********** T24-m0188-3p 24849 ---------TCCGAAAATAATGCATCTTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0934898 2 -----------CGAAAATAATGCATCTTCAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2270271 1 -----------CGAAAATAATGCATCTTCAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3846149 1 ------------GAAAATAATGCATCTTCAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0154342 9 -------------AAAATAATGCATCTTCAACGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0701706 2 -------------------ATGCATCTTCAACGTGGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t4169388 1 -------------------ATGCATCTTCAACGTGGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0058261 20 ----------------------CATCTTCAACGTGGTGTTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t4161975 1 -----------------------ATCTTCAACGTGGTGTTTGGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0307159 5 ------------------------TCTTCAACGTGGTGTTTGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0144146 9 ---------------------------------TGGTGTTTGGATGAACGTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3322270 1 -------------------------------------------------------------------------------TACAAGGTGAATCACTCGGAA--------------------------------------------------------------------------------------------------------------------------- t4730152 1 ----------------------------------------------------------------------------------AAGGTGAATCACTCGGAAGTA------------------------------------------------------------------------------------------------------------------------ t3463781 1 -----------------------------------------------------------------------------------AGGTGAATCACTCGGAAGTAC----------------------------------------------------------------------------------------------------------------------- t0962574 2 -----------------------------------------------------------------------------------AGGTGAATCACTCGGAAGTACA---------------------------------------------------------------------------------------------------------------------- t1205002 2 --------------------------------------------------------------------------------------TGAATCACTCGGAAGTACAAAATC----------------------------------------------------------------------------------------------------------------- t5256668 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGTAAGATCTTAATAAG------------------------------------------------ t0665527 2 ----------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGTAAGATCTTAATAAGTT---------------------------------------------- t1583331 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGATCTTAATAAGTTCATC------------------------------------------ t0855083 2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAATAAGTTCATCCAAA-------------------------------------- t3702150 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAATAAGTTCATCCAAACACC---------------------------------- t5421240 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAATAAGTTCATCCAAA-------------------------------------- t0478073 3 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAATAAGTTCATCCAAACACC---------------------------------- t0291519 5 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAAGTTCATCCAAACACC---------------------------------- t0090815 14 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAAGTTCATCCAAACACC---------------------------------- t0310122 5 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAGTTCATCCAAACACCA--------------------------------- t0986395 2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGTTCATCCAAACACCA--------------------------------- t4608976 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGTTCATCCAAACACCAT-------------------------------- t0734900 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACC---------------------------------- t5150576 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCA--------------------------------- t1251002 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCAT-------------------------------- t0603517 3 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCATA------------------------------- t0003760 173 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCCAAACACCATATTGA--------------------------- t0573560 3 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAAACACCATATTGAGGAT----------------------- t0612474 3 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAAACACCATATTGAGGATGCA-------------------- t1965692 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACCATATTGAGGATG---------------------- t2725893 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACCATATTGAGGATGC--------------------- t0261001 5 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACCATATTGAGGATGCA-------------------- t1229477 2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACACCATATTGAGGATGCA-------------------- t0017915 51 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACCATATTGAGGATGCAT------------------- t0460413 3 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACCATATTGAGGATGCATA------------------ t2139928 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCATATTGAGGATGCATAG----------------- t0013035 66 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATATTGAGGATGCATAGT---------------- t3645546 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATTGAGGATGCATAGTTT-------------- t1194692 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTGAGGATGCATAGTTTT------------- t0122560 10 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGAGGATGCATAGTTTT------------- t5294252 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAGGATGCATAGTTTTCA----------- t0192546 7 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAGGATGCATAGTTTTCAG---------- t0110272 11 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTT------------- t0065979 18 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTC------------ t0261205 5 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCA----------- t0022568 43 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAG---------- t0000019 24676 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAGA--------- t0024885 40 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAGAA-------- t0475980 3 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAGAAA------- t1555382 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGATGCATAGTTTTCAG---------- t0102627 12 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGATGCATAGTTTTCAGA--------- t0080530 15 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGATGCATAGTTTTCAG---------- t1190298 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATGCATAGTTTTCAG---------- t0533865 3 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATGCATAGTTTTCAGAAA------- t5020563 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATGCATAGTTTTCAGAAAATA---- t4727500 1 // T24-m0191 scaffold266.0:383731:383953:- 223(nt) -102.10(kcal/mol) ACTGCATTTTCCGAAAATAATGCATCTTCAACGTGGTGTTTGGATGAACGTGTTAAGATCCTACAAATGAAAATATTTCTACAAGGTGAATCACTCGGAAGTACAAAATCAGAGGAAAATTTTTGGTACTTCTCATACTTTTGAGGGGTTCATCTTGTTGTAAGATCTTAATAAGTTCATCCAAACACCATATTGAGGATGCATAGTTTTCAGAAAATACAAT T24-m0191 25264 ..((.((((((.((((((.((((((((((((..((((((((((((((((.((((((((((.((((...(((.....))).((((((((((((.((((((((((....((((((((....))))))))........)))))))))).)))))))))))))))).)))))))))).))))))))))))))))..)))))))))))).)))))).)))))).)).. ************GAAAATAATGCATCTTCAACG********************************************************************************************************************************************************************************************** T24-m0191-5p 15 ************************************************************************************************************************************************************************************************TTGAGGATGCATAGTTTTCAG********** T24-m0191-3p 24849 ---------TCCGAAAATAATGCATCTTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0934898 2 -----------CGAAAATAATGCATCTTCAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2270271 1 -----------CGAAAATAATGCATCTTCAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3846149 1 ------------GAAAATAATGCATCTTCAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0154342 9 -------------AAAATAATGCATCTTCAACGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0701706 2 -------------------ATGCATCTTCAACGTGGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t4169388 1 -------------------ATGCATCTTCAACGTGGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0058261 20 ----------------------CATCTTCAACGTGGTGTTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t4161975 1 -----------------------ATCTTCAACGTGGTGTTTGGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0307159 5 ------------------------TCTTCAACGTGGTGTTTGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0144146 9 ---------------------------------TGGTGTTTGGATGAACGTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3322270 1 -------------------------------------------------------------------------------TACAAGGTGAATCACTCGGAA--------------------------------------------------------------------------------------------------------------------------- t4730152 1 ----------------------------------------------------------------------------------AAGGTGAATCACTCGGAAGTA------------------------------------------------------------------------------------------------------------------------ t3463781 1 -----------------------------------------------------------------------------------AGGTGAATCACTCGGAAGTAC----------------------------------------------------------------------------------------------------------------------- t0962574 2 -----------------------------------------------------------------------------------AGGTGAATCACTCGGAAGTACA---------------------------------------------------------------------------------------------------------------------- t1205002 2 --------------------------------------------------------------------------------------TGAATCACTCGGAAGTACAAAATC----------------------------------------------------------------------------------------------------------------- t5256668 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGTAAGATCTTAATAAG------------------------------------------------ t0665527 2 ----------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGTAAGATCTTAATAAGTT---------------------------------------------- t1583331 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGATCTTAATAAGTTCATC------------------------------------------ t0855083 2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAATAAGTTCATCCAAA-------------------------------------- t3702150 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAATAAGTTCATCCAAACACC---------------------------------- t5421240 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAATAAGTTCATCCAAA-------------------------------------- t0478073 3 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAATAAGTTCATCCAAACACC---------------------------------- t0291519 5 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAAGTTCATCCAAACACC---------------------------------- t0090815 14 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAAGTTCATCCAAACACC---------------------------------- t0310122 5 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAGTTCATCCAAACACCA--------------------------------- t0986395 2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGTTCATCCAAACACCA--------------------------------- t4608976 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGTTCATCCAAACACCAT-------------------------------- t0734900 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACC---------------------------------- t5150576 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCA--------------------------------- t1251002 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCAT-------------------------------- t0603517 3 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCATA------------------------------- t0003760 173 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCCAAACACCATATTGA--------------------------- t0573560 3 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAAACACCATATTGAGGAT----------------------- t0612474 3 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAAACACCATATTGAGGATGCA-------------------- t1965692 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACCATATTGAGGATG---------------------- t2725893 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACCATATTGAGGATGC--------------------- t0261001 5 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACCATATTGAGGATGCA-------------------- t1229477 2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACACCATATTGAGGATGCA-------------------- t0017915 51 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACCATATTGAGGATGCAT------------------- t0460413 3 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACCATATTGAGGATGCATA------------------ t2139928 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCATATTGAGGATGCATAG----------------- t0013035 66 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATATTGAGGATGCATAGT---------------- t3645546 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATTGAGGATGCATAGTTT-------------- t1194692 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTGAGGATGCATAGTTTT------------- t0122560 10 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGAGGATGCATAGTTTT------------- t5294252 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAGGATGCATAGTTTTCA----------- t0192546 7 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAGGATGCATAGTTTTCAG---------- t0110272 11 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTT------------- t0065979 18 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTC------------ t0261205 5 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCA----------- t0022568 43 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAG---------- t0000019 24676 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAGA--------- t0024885 40 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAGAA-------- t0475980 3 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAGAAA------- t1555382 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGATGCATAGTTTTCAG---------- t0102627 12 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGATGCATAGTTTTCAGA--------- t0080530 15 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGATGCATAGTTTTCAG---------- t1190298 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATGCATAGTTTTCAG---------- t0533865 3 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATGCATAGTTTTCAGAAA------- t5020563 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATGCATAGTTTTCAGAAAATA---- t4727500 1 // T37-m0207 scaffold266.0:262299:262521:+ 223(nt) -102.10(kcal/mol) ACTGCATTTTCCGAAAATAATGCATCTTCAACGTGGTGTTTGGATGAACGTGTTAAGATCCTACAAATGAAAATATTTCTACAAGGTGAATCACTCGGAAGTACAAAATCAGAGGAAAATTTTTGGTACTTCTCATACTTTTGAGGGGTTCATCTTGTTGTAAGATCTTAATAAGTTCATCCAAACACCATATTGAGGATGCATAGTTTTCAGAAAATACAAT T37-m0207 29586 ..((.((((((.((((((.((((((((((((..((((((((((((((((.((((((((((.((((...(((.....))).((((((((((((.((((((((((....((((((((....))))))))........)))))))))).)))))))))))))))).)))))))))).))))))))))))))))..)))))))))))).)))))).)))))).)).. ************GAAAATAATGCATCTTCAACG********************************************************************************************************************************************************************************************** T37-m0207-5p 10 ************************************************************************************************************************************************************************************************TTGAGGATGCATAGTTTTCAG********** T37-m0207-3p 29021 -------TTTCCGAAAATAATGCATCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0869423 1 -----------CGAAAATAATGCATCTTCAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1489357 1 ------------GAAAATAATGCATCTTCAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0726586 2 -------------AAAATAATGCATCTTCAACGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0171296 5 ---------------AATAATGCATCTTCAACGTGGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0761703 2 -------------------ATGCATCTTCAACGTGGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0563231 2 -------------------ATGCATCTTCAACGTGGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0029874 25 ----------------------CATCTTCAACGTGGTGTTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0233676 4 -----------------------ATCTTCAACGTGGTGTTTGGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0565317 2 ------------------------TCTTCAACGTGGTGTTTGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0063060 13 ------------------------------ACGTGGTGTTTGGATGAACGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2257299 1 ---------------------------------TGGTGTTTGGATGAACGTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0495876 2 ----------------------------------------------------------------------------------AAGGTGAATCACTCGGAAGTA------------------------------------------------------------------------------------------------------------------------ t0924149 1 -----------------------------------------------------------------------------------AGGTGAATCACTCGGAAGTAC----------------------------------------------------------------------------------------------------------------------- t0904763 1 -----------------------------------------------------------------------------------AGGTGAATCACTCGGAAGTACA---------------------------------------------------------------------------------------------------------------------- t3495026 1 -----------------------------------------------------------------------------------AGGTGAATCACTCGGAAGTACAA--------------------------------------------------------------------------------------------------------------------- t3079724 1 -------------------------------------------------------------------------------------GTGAATCACTCGGAAGTACA---------------------------------------------------------------------------------------------------------------------- t3229214 1 --------------------------------------------------------------------------------------TGAATCACTCGGAAGTACAA--------------------------------------------------------------------------------------------------------------------- t3122167 1 --------------------------------------------------------------------------------------TGAATCACTCGGAAGTACAAA-------------------------------------------------------------------------------------------------------------------- t0344450 3 --------------------------------------------------------------------------------------TGAATCACTCGGAAGTACAAAAT------------------------------------------------------------------------------------------------------------------ t0196223 5 ------------------------------------------------------------------------------------------TCACTCGGAAGTACAAAATCA---------------------------------------------------------------------------------------------------------------- t3919768 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGTAAGATCTTAATAAG------------------------------------------------ t0891453 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGATCTTAATAAGTTCATC------------------------------------------ t0681984 2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAATAAGTTCATCCAAA-------------------------------------- t0299535 3 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAATAAGTTCATCCAAAC------------------------------------- t2828834 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAATAAGTTCATCCAAACACC---------------------------------- t0407288 3 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATAAGTTCATCCAAACACCA--------------------------------- t2977894 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAAGTTCATCCAAACAC----------------------------------- t0638620 2 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAAGTTCATCCAAACACC---------------------------------- t0036944 21 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAAGTTCATCCAAACACC---------------------------------- t0083063 10 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAAGTTCATCCAAACACCATA------------------------------- t0992074 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAGTTCATCCAAACACCA--------------------------------- t1161726 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGTTCATCCAAACACCAT-------------------------------- t0226460 4 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGTTCATCCAAACACCATA------------------------------- t0597287 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCAT-------------------------------- t0613325 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCATA------------------------------- t0002346 229 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCATAT------------------------------ t0298791 3 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCCAAACACCATATTG---------------------------- t3295833 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCCAAACACCATATTGA--------------------------- t1492445 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATCCAAACACCATATTGAG-------------------------- t1466394 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCAAACACCATATTGAGGATGC--------------------- t0567742 2 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAAACACCATATTGAGGAT----------------------- t2626636 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAAACACCATATTGAGGATGCA-------------------- t1873023 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACCATATTGAGGATGC--------------------- t0209536 4 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACCATATTGAGGATGCA-------------------- t0078311 11 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACACCATATTGAGGATGC--------------------- t3350697 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACACCATATTGAGGATGCA-------------------- t0007616 82 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACCATATTGAGGATGCAT------------------- t1361237 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACCATATTGAGGATGCATA------------------ t2130081 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCATATTGAGGATGCATA------------------ t3217609 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCATATTGAGGATGCATAG----------------- t0006791 91 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATATTGAGGATGCATAGT---------------- t1192102 1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATATTGAGGATGCATAGTTT-------------- t0510070 2 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATATTGAGGATGCATAGTTT-------------- t1879622 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATTGAGGATGCATAGTTT-------------- t3384502 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTGAGGATGCATAGTTTT------------- t0210790 4 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGAGGATGCATAGTTTTCAG---------- t2771293 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAGGATGCATAGTTTTCA----------- t0374075 3 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAGGATGCATAGTTTTCAG---------- t0212015 4 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTT------------- t0008510 75 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTC------------ t0050810 15 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCA----------- t0036051 21 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAG---------- t0000017 28826 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAGA--------- t0023609 31 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAGAA-------- t0544952 2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAGAAA------- t0475471 2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAGAAAA------ t0959461 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGATGCATAGTTTTCAG---------- t0046073 17 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGATGCATAGTTTTCAGA--------- t0055077 14 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGATGCATAGTTTTCAGAA-------- t1599497 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGATGCATAGTTTTCAG---------- t0734990 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATGCATAGTTTTCAG---------- t3502167 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATGCATAGTTTTCAGA--------- t3541596 1 // T37-m0210 scaffold266.0:383731:383953:- 223(nt) -102.10(kcal/mol) ACTGCATTTTCCGAAAATAATGCATCTTCAACGTGGTGTTTGGATGAACGTGTTAAGATCCTACAAATGAAAATATTTCTACAAGGTGAATCACTCGGAAGTACAAAATCAGAGGAAAATTTTTGGTACTTCTCATACTTTTGAGGGGTTCATCTTGTTGTAAGATCTTAATAAGTTCATCCAAACACCATATTGAGGATGCATAGTTTTCAGAAAATACAAT T37-m0210 29586 ..((.((((((.((((((.((((((((((((..((((((((((((((((.((((((((((.((((...(((.....))).((((((((((((.((((((((((....((((((((....))))))))........)))))))))).)))))))))))))))).)))))))))).))))))))))))))))..)))))))))))).)))))).)))))).)).. ************GAAAATAATGCATCTTCAACG********************************************************************************************************************************************************************************************** T37-m0210-5p 10 ************************************************************************************************************************************************************************************************TTGAGGATGCATAGTTTTCAG********** T37-m0210-3p 29021 -------TTTCCGAAAATAATGCATCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0869423 1 -----------CGAAAATAATGCATCTTCAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1489357 1 ------------GAAAATAATGCATCTTCAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0726586 2 -------------AAAATAATGCATCTTCAACGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0171296 5 ---------------AATAATGCATCTTCAACGTGGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0761703 2 -------------------ATGCATCTTCAACGTGGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0563231 2 -------------------ATGCATCTTCAACGTGGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0029874 25 ----------------------CATCTTCAACGTGGTGTTTGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0233676 4 -----------------------ATCTTCAACGTGGTGTTTGGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0565317 2 ------------------------TCTTCAACGTGGTGTTTGGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0063060 13 ------------------------------ACGTGGTGTTTGGATGAACGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2257299 1 ---------------------------------TGGTGTTTGGATGAACGTGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0495876 2 ----------------------------------------------------------------------------------AAGGTGAATCACTCGGAAGTA------------------------------------------------------------------------------------------------------------------------ t0924149 1 -----------------------------------------------------------------------------------AGGTGAATCACTCGGAAGTAC----------------------------------------------------------------------------------------------------------------------- t0904763 1 -----------------------------------------------------------------------------------AGGTGAATCACTCGGAAGTACA---------------------------------------------------------------------------------------------------------------------- t3495026 1 -----------------------------------------------------------------------------------AGGTGAATCACTCGGAAGTACAA--------------------------------------------------------------------------------------------------------------------- t3079724 1 -------------------------------------------------------------------------------------GTGAATCACTCGGAAGTACA---------------------------------------------------------------------------------------------------------------------- t3229214 1 --------------------------------------------------------------------------------------TGAATCACTCGGAAGTACAA--------------------------------------------------------------------------------------------------------------------- t3122167 1 --------------------------------------------------------------------------------------TGAATCACTCGGAAGTACAAA-------------------------------------------------------------------------------------------------------------------- t0344450 3 --------------------------------------------------------------------------------------TGAATCACTCGGAAGTACAAAAT------------------------------------------------------------------------------------------------------------------ t0196223 5 ------------------------------------------------------------------------------------------TCACTCGGAAGTACAAAATCA---------------------------------------------------------------------------------------------------------------- t3919768 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTGTAAGATCTTAATAAG------------------------------------------------ t0891453 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGATCTTAATAAGTTCATC------------------------------------------ t0681984 2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAATAAGTTCATCCAAA-------------------------------------- t0299535 3 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAATAAGTTCATCCAAAC------------------------------------- t2828834 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAATAAGTTCATCCAAACACC---------------------------------- t0407288 3 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATAAGTTCATCCAAACACCA--------------------------------- t2977894 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAAGTTCATCCAAACAC----------------------------------- t0638620 2 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAAGTTCATCCAAACACC---------------------------------- t0036944 21 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAAGTTCATCCAAACACC---------------------------------- t0083063 10 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAAGTTCATCCAAACACCATA------------------------------- t0992074 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAGTTCATCCAAACACCA--------------------------------- t1161726 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGTTCATCCAAACACCAT-------------------------------- t0226460 4 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGTTCATCCAAACACCATA------------------------------- t0597287 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCAT-------------------------------- t0613325 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCATA------------------------------- t0002346 229 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCATAT------------------------------ t0298791 3 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCCAAACACCATATTG---------------------------- t3295833 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCCAAACACCATATTGA--------------------------- t1492445 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATCCAAACACCATATTGAG-------------------------- t1466394 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCAAACACCATATTGAGGATGC--------------------- t0567742 2 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAAACACCATATTGAGGAT----------------------- t2626636 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAAACACCATATTGAGGATGCA-------------------- t1873023 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACCATATTGAGGATGC--------------------- t0209536 4 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACCATATTGAGGATGCA-------------------- t0078311 11 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACACCATATTGAGGATGC--------------------- t3350697 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACACCATATTGAGGATGCA-------------------- t0007616 82 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACACCATATTGAGGATGCAT------------------- t1361237 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACACCATATTGAGGATGCATA------------------ t2130081 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCATATTGAGGATGCATA------------------ t3217609 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCATATTGAGGATGCATAG----------------- t0006791 91 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATATTGAGGATGCATAGT---------------- t1192102 1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCATATTGAGGATGCATAGTTT-------------- t0510070 2 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATATTGAGGATGCATAGTTT-------------- t1879622 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATATTGAGGATGCATAGTTT-------------- t3384502 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATATTGAGGATGCATAGTTTT------------- t0210790 4 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGAGGATGCATAGTTTTCAG---------- t2771293 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAGGATGCATAGTTTTCA----------- t0374075 3 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGAGGATGCATAGTTTTCAG---------- t0212015 4 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTT------------- t0008510 75 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTC------------ t0050810 15 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCA----------- t0036051 21 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAG---------- t0000017 28826 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAGA--------- t0023609 31 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAGAA-------- t0544952 2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAGAAA------- t0475471 2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAGGATGCATAGTTTTCAGAAAA------ t0959461 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGATGCATAGTTTTCAG---------- t0046073 17 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGATGCATAGTTTTCAGA--------- t0055077 14 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGATGCATAGTTTTCAGAA-------- t1599497 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGGATGCATAGTTTTCAG---------- t0734990 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATGCATAGTTTTCAG---------- t3502167 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGATGCATAGTTTTCAGA--------- t3541596 1 // novel16 T24-m0016 scaffold103.0:770828:771097:- 270(nt) -79.30(kcal/mol) TTTGATAGGGTTGTCGAAGTAGCTGCCGACTCATTCACTCAAGCACTCAGTAGAGATTAAAGGAGTATCCGGCTTGTCTTATTACTTTCCTTCATTCCTGCTGCACATACATATGTTGCTCTCAGATGTGGCACTTCCAGACCGGACTAGAAGCGACTGCAGATGGACCGTCATCGGATGTGGGACTTGTGCCTTTCCGAAATCATCAGACAATTTGCTACTGTGGTTGTGTGAATGATGCGGGAGATATTTTACATCCCTCTTTCTCTG T24-m0016 137 ...((.((((.(((.((((((.((.(((..((((((((.(((.(((..(((((........((.....))...((((((........(((.((....(((..((((((....))).)))...)))..(..((.((((.((......)).)))).).)..).)).)))......(((((...(((.(....)))).))))).......))))))....)))))))).))).))))))))..))).)).))))))))).))))...)).... ********************AGCTGCCGACTCATTCACTCA************************************************************************************************************************************************************************************************************************************* T24-m0016-5p 25 *************************************************************************************************************************************************************************************************************************************TGTGAATGATGCGGGAGATAT******************** T24-m0016-3p 108 --------------------AGCTGCCGACTCATTCACTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------AGCTGCCGACTCATTCACTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------TCATTCACTCAAGCACTCAGTAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------TGTTGCTCTCAGATGTGGCACT------------------------------------------------------------------------------------------------------------------------ -----------------------------------------------------------------------------------------------------------------------------------------------------------------GATGGACCGTCATCGGATGTGG------------------------------------------------------------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGTGAATGATGCGGGAGATA------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGTGAATGATGCGGGAGATAT----- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGAATGATGCGGGAGATA------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGAATGATGCGGGAGATAT----- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGAATGATGCGGGAGATATT---- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGAATGATGCGGGAGATAT----- // T37-m0018 scaffold103.0:770828:771097:- 270(nt) -79.30(kcal/mol) TTTGATAGGGTTGTCGAAGTAGCTGCCGACTCATTCACTCAAGCACTCAGTAGAGATTAAAGGAGTATCCGGCTTGTCTTATTACTTTCCTTCATTCCTGCTGCACATACATATGTTGCTCTCAGATGTGGCACTTCCAGACCGGACTAGAAGCGACTGCAGATGGACCGTCATCGGATGTGGGACTTGTGCCTTTCCGAAATCATCAGACAATTTGCTACTGTGGTTGTGTGAATGATGCGGGAGATATTTTACATCCCTCTTTCTCTG T37-m0018 126 ...((.((((.(((.((((((.((.(((..((((((((.(((.(((..(((((........((.....))...((((((........(((.((....(((..((((((....))).)))...)))..(..((.((((.((......)).)))).).)..).)).)))......(((((...(((.(....)))).))))).......))))))....)))))))).))).))))))))..))).)).))))))))).))))...)).... ********************AGCTGCCGACTCATTCACTCA************************************************************************************************************************************************************************************************************************************* T37-m0018-5p 11 *************************************************************************************************************************************************************************************************************************************TGTGAATGATGCGGGAGATAT******************** T37-m0018-3p 114 TTTGATAGGGTTGTCGAAGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3373313 1 --------------------AGCTGCCGACTCATTCACTCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGTGAATGATGCGGGAGAT------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTGTGAATGATGCGGGAGATAT----- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGAATGATGCGGGAGAT------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGAATGATGCGGGAGATA------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGAATGATGCGGGAGATAT----- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGAATGATGCGGGAGATATT---- // novel169 T24-m0205 scaffold28.0:521136:521245:+ 110(nt) -32.70(kcal/mol) TAGGAAAAATTAGGATAGGATAAGATAAGGTTAGGTTGGATAAGGTTTGGATAATGTTCTTTCTTTTTAGCTGATTCCTTATCTTCAATGTCTTGAATTAATTCTTCCAG T24-m0205 116 ..((((.((((((..(((((((((((((((...(((((((.((((...(((......))).)))))))))))....))))))))....)))))))..)))))).)))).. **********TAGGATAGGATAAGATAAGGTTA***************************************************************************** T24-m0205-5p 112 ***************************************************************************TCCTTATCTTCAATGTCTTGAATTAAT******** T24-m0205-3p 1 --------ATTAGGATAGGATAAGATAAGGTT------------------------------------------------------------------------------ t0188758 7 ---------TTAGGATAGGATAAGATAAGGT------------------------------------------------------------------------------- t5118022 1 ---------TTAGGATAGGATAAGATAAGGTT------------------------------------------------------------------------------ t0048802 23 ---------TTAGGATAGGATAAGATAAGGTTA----------------------------------------------------------------------------- t2804535 1 ----------TAGGATAGGATAAGATAAGG-------------------------------------------------------------------------------- t2059229 1 ----------TAGGATAGGATAAGATAAGGT------------------------------------------------------------------------------- t5304205 1 ----------TAGGATAGGATAAGATAAGGTT------------------------------------------------------------------------------ t0124185 10 ----------TAGGATAGGATAAGATAAGGTTA----------------------------------------------------------------------------- t0015203 59 -----------AGGATAGGATAAGATAAGGT------------------------------------------------------------------------------- t4718444 1 -----------AGGATAGGATAAGATAAGGTT------------------------------------------------------------------------------ t0427523 4 -----------AGGATAGGATAAGATAAGGTTA----------------------------------------------------------------------------- t0574789 3 -----------AGGATAGGATAAGATAAGGTTAG---------------------------------------------------------------------------- t3171693 1 --------------------------------------------------------------CTTTTTAGCTGATTCCTTATCTTC------------------------ t2973871 1 --------------------------------------------------------------------AGCTGATTCCTTATCTTCAAT--------------------- t2177969 1 --------------------------------------------------------------------AGCTGATTCCTTATCTTCAATGTC------------------ t3952242 1 -------------------------------------------------------------------------ATTCCTTATCTTCAATGTCTTGAA------------- t1999418 1 // novel179 T24-m0219 scaffold292.0:202953:203207:+ 255(nt) -99.40(kcal/mol) TGGGAACGAGGTATGCAGTGCAGCCAAGGATGACTTGCCGGCAACAATGCTCCCATACAATATTTGTATATCAACCCTAATCTTGCAGATCTATATATGTATATATGTATATGTGCATAGCATATACATATGGGATGTATCATGTATGTTGATGTCATCTCATGCGTATATGCATGATAGATAAGATACATGATCTTGTGACAATGAGTTGATCGGCAAGTCGTCTCTGGCTACATTTTTGCCTCCTTTTCTCAT T24-m0219 470 ((((((.((((((...((((.(((((..(((((((((((((((((.......................(((((..........((((.((.(((((((....))))))).)).))))..((((((((.((((((((((((((.......))))).))))))))).)))))))).))))).(((((((.....)))))))........)))).)))))))))))))..))))).))))..))))))...)))))). ********************CAGCCAAGGATGACTTGCCGG********************************************************************************************************************************************************************************************************************** T24-m0219-5p 448 **********************************************************************************************************************************************************************************************************************GGCAAGTCGTCTCTGGCTACA******************** T24-m0219-3p 20 --------------------CAGCCAAGGATGACTTGCCGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------CAGCCAAGGATGACTTGCCGGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------CAGCCAAGGATGACTTGCCGGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGAGTTGATCGGCAAGTCG-------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGCAAGTCGTCTCTGGCTAC--------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAAGTCGTCTCTGGCTA---------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAAGTCGTCTCTGGCTAC--------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAAGTCGTCTCTGGCTACA-------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAAGTCGTCTCTGGCTACAT------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAGTCGTCTCTGGCTAC--------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAGTCGTCTCTGGCTACA-------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGTCGTCTCTGGCTACATT------------------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGGCTACATTTTTGCCTCCT-------- // T37-m0231 scaffold292.0:202953:203206:+ 254(nt) -98.90(kcal/mol) TGGGAACGAGGTATGCAGTGCAGCCAAGGATGACTTGCCGGCAACAATGCTCCCATACAATATTTGTATATCAACCCTAATCTTGCAGATCTATATATGTATATATGTATATGTGCATAGCATATACATATGGGATGTATCATGTATGTTGATGTCATCTCATGCGTATATGCATGATAGATAAGATACATGATCTTGTGACAATGAGTTGATCGGCAAGTCGTCTCTGGCTACATTTTTGCCTCCTTTTCTCA T37-m0231 536 .(((((.((((((...((((.(((((..(((((((((((((((((.......................(((((..........((((.((.(((((((....))))))).)).))))..((((((((.((((((((((((((.......))))).))))))))).)))))))).))))).(((((((.....)))))))........)))).)))))))))))))..))))).))))..))))))...))))). ********************CAGCCAAGGATGACTTGCCGG********************************************************************************************************************************************************************************************************************* T37-m0231-5p 521 **********************************************************************************************************************************************************************************************************************GGCAAGTCGTCTCTGGCTAC******************** T37-m0231-3p 15 --------------------CAGCCAAGGATGACTTGCCG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------CAGCCAAGGATGACTTGCCGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------CAGCCAAGGATGACTTGCCGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAAGTCGTCTCTGGCTAC-------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCAAGTCGTCTCTGGCTACA------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAAGTCGTCTCTGGCTACA------------------- // novel187 T24-m0227 scaffold3.0:1347347:1347448:+ 102(nt) -63.66(kcal/mol) CGTTCTGCAATTTTTGGTACCGTTTCGGGAAGCAGCTTGAGAAATACTCTAGCGCTCCTTCTCAAGCCGCTCCCCGGCAACGGTGCCAAAAATTGCAGAACC T24-m0227 166 .((((((((((((((((((((((((((((.(((.(((((((((...............))))))))).))).))))).))))))))))))))))))))))). ************TTTGGTACCGTTTCGGGAAGC********************************************************************* T24-m0227-5p 12 **********************************************************************TCCCCGGCAACGGTGCCAAAAA********** T24-m0227-3p 149 -----------TTTTGGTACCGTTTCGGGAAG---------------------------------------------------------------------- t1059155 2 ------------TTTGGTACCGTTTCGGGAAGC--------------------------------------------------------------------- t0194649 7 -------------TTGGTACCGTTTCGGGAAGC--------------------------------------------------------------------- t3547918 1 --------------TGGTACCGTTTCGGGAAGCAG------------------------------------------------------------------- t2552805 1 --------------TGGTACCGTTTCGGGAAGCAGC------------------------------------------------------------------ t1538698 1 -------------------CCGTTTCGGGAAGCAGCTTGA-------------------------------------------------------------- t0518788 3 -------------------CCGTTTCGGGAAGCAGCTTGAG------------------------------------------------------------- t3786267 1 ----------------------------------------------------------------AGCCGCTCCCCGGCAACGGTGC---------------- t3456092 1 -------------------------------------------------------------------CGCTCCCCGGCAACGGTGCCAA------------- t0347860 4 -------------------------------------------------------------------CGCTCCCCGGCAACGGTGCCAAA------------ t0506857 3 ----------------------------------------------------------------------TCCCCGGCAACGGTGCCAAAA----------- t0409700 4 ----------------------------------------------------------------------TCCCCGGCAACGGTGCCAAAAA---------- t0005099 137 ----------------------------------------------------------------------TCCCCGGCAACGGTGCCAAAAAT--------- t3284945 1 // T37-m0238 scaffold3.0:1347347:1347448:+ 102(nt) -63.66(kcal/mol) CGTTCTGCAATTTTTGGTACCGTTTCGGGAAGCAGCTTGAGAAATACTCTAGCGCTCCTTCTCAAGCCGCTCCCCGGCAACGGTGCCAAAAATTGCAGAACC T37-m0238 114 .((((((((((((((((((((((((((((.(((.(((((((((...............))))))))).))).))))).))))))))))))))))))))))). ************TTTGGTACCGTTTCGGGAAGC********************************************************************* T37-m0238-5p 8 **********************************************************************TCCCCGGCAACGGTGCCAAAAA********** T37-m0238-3p 104 ------------TTTGGTACCGTTTCGGGAAGC--------------------------------------------------------------------- t0391789 3 -------------TTGGTACCGTTTCGGGAAGC--------------------------------------------------------------------- t1048034 1 -------------TTGGTACCGTTTCGGGAAGCA-------------------------------------------------------------------- t0429267 2 --------------TGGTACCGTTTCGGGAAGCAGC------------------------------------------------------------------ t0472444 2 -------------------CCGTTTCGGGAAGCAGCTTGA-------------------------------------------------------------- t0700605 2 -------------------------------------------------------------------CGCTCCCCGGCAACGGTGCCAA------------- t1893984 1 -------------------------------------------------------------------CGCTCCCCGGCAACGGTGCCAAA------------ t0656821 2 ----------------------------------------------------------------------TCCCCGGCAACGGTGCCAAAA----------- t0592711 2 ----------------------------------------------------------------------TCCCCGGCAACGGTGCCAAAAA---------- t0006393 96 ----------------------------------------------------------------------TCCCCGGCAACGGTGCCAAAAAT--------- t0795459 2 -----------------------------------------------------------------------CCCCGGCAACGGTGCCAAAAAT--------- t2921350 1 // novel2 T24-m0002 scaffold1.0:2288735:2288874:+ 140(nt) -47.60(kcal/mol) GTATTCAATTCATCCTCCAACAAGTCCGTGATCTCTATGCGCAATCTCTTAATTTATGATAAAATCAACAAAGAAATGCTATGAAAAGAAAGTAGTTTGCGGATAGAGATAACGAACTTGTCGTAGGATGAGCTGAAGAT T24-m0002 7687 ...((((.((((((((.(.((((((.(((.((((((((.(((((.(((((......((((...)))).((.((.....)).))......))).)).))))).)))))))).))).)))))).).)))))))).))))... ************TCCTCCAACAAGTCCGTGATC*********************************************************************************************************** T24-m0002-5p 501 *************************************************************************************************************TAACGAACTTGTCGTAGGATG********** T24-m0002-3p 6915 ---------TCATCCTCCAACAAGTCCGTG-------------------------------------------------------------------------------------------------------------- t3874939 1 ---------TCATCCTCCAACAAGTCCGTGA------------------------------------------------------------------------------------------------------------- t3879826 1 ----------CATCCTCCAACAAGTCCGTGA------------------------------------------------------------------------------------------------------------- t0258653 6 ----------CATCCTCCAACAAGTCCGTGAT------------------------------------------------------------------------------------------------------------ t0149456 9 -----------ATCCTCCAACAAGTCCGTGAT------------------------------------------------------------------------------------------------------------ t1596558 1 -----------ATCCTCCAACAAGTCCGTGATC----------------------------------------------------------------------------------------------------------- t1369382 1 -----------ATCCTCCAACAAGTCCGTGATCT---------------------------------------------------------------------------------------------------------- t2203850 1 ------------TCCTCCAACAAGTCCGTGA------------------------------------------------------------------------------------------------------------- t0295241 5 ------------TCCTCCAACAAGTCCGTGAT------------------------------------------------------------------------------------------------------------ t0113997 11 ------------TCCTCCAACAAGTCCGTGATC----------------------------------------------------------------------------------------------------------- t0001526 342 ------------TCCTCCAACAAGTCCGTGATCT---------------------------------------------------------------------------------------------------------- t0006914 109 ------------TCCTCCAACAAGTCCGTGATCTCT-------------------------------------------------------------------------------------------------------- t0173279 8 -------------CCTCCAACAAGTCCGTGATCT---------------------------------------------------------------------------------------------------------- t0646797 3 ---------------TCCAACAAGTCCGTGATCTCT-------------------------------------------------------------------------------------------------------- t4886740 1 ---------------TCCAACAAGTCCGTGATCTCTA------------------------------------------------------------------------------------------------------- t0837456 2 -------------------ACAAGTCCGTGATCTCTAT------------------------------------------------------------------------------------------------------ t1849146 1 -------------------ACAAGTCCGTGATCTCTATGC---------------------------------------------------------------------------------------------------- t0459923 3 ------------------------TCCGTGATCTCTATGCGCAAT----------------------------------------------------------------------------------------------- t0670503 2 ---------------------------------TCTATGCGCAATCTCTTAATT-------------------------------------------------------------------------------------- t3936208 1 ---------------------------------TCTATGCGCAATCTCTTAATTTAT----------------------------------------------------------------------------------- t2638774 1 ------------------------------------ATGCGCAATCTCTTAATTTAT----------------------------------------------------------------------------------- t2811126 1 ------------------------------------------------------TATGATAAAATCAACAAAGAA----------------------------------------------------------------- t4395840 1 ------------------------------------------------------------------------------CTATGAAAAGAAAGTAGTTTG----------------------------------------- t0187865 7 -------------------------------------------------------------------------------TATGAAAAGAAAGTAGTTTGC---------------------------------------- t0132118 10 -------------------------------------------------------------------------------TATGAAAAGAAAGTAGTTTGCG--------------------------------------- t0802956 2 --------------------------------------------------------------------------------ATGAAAAGAAAGTAGTTTGCG--------------------------------------- t0714678 2 ---------------------------------------------------------------------------------TGAAAAGAAAGTAGTTTGCGG-------------------------------------- t0113442 11 ---------------------------------------------------------------------------------TGAAAAGAAAGTAGTTTGCGGA------------------------------------- t0498097 3 ----------------------------------------------------------------------------------GAAAAGAAAGTAGTTTGCGGA------------------------------------- t1145919 2 ----------------------------------------------------------------------------------GAAAAGAAAGTAGTTTGCGGAT------------------------------------ t1380235 1 -----------------------------------------------------------------------------------AAAAGAAAGTAGTTTGCGGAT------------------------------------ t0066388 18 ------------------------------------------------------------------------------------AAAGAAAGTAGTTTGCGGATA----------------------------------- t0644226 3 ------------------------------------------------------------------------------------AAAGAAAGTAGTTTGCGGATAG---------------------------------- t1903760 1 ------------------------------------------------------------------------------------AAAGAAAGTAGTTTGCGGATAGAG-------------------------------- t2909625 1 -------------------------------------------------------------------------------------AAGAAAGTAGTTTGCGGATAG---------------------------------- t0106185 12 -------------------------------------------------------------------------------------AAGAAAGTAGTTTGCGGATAGA--------------------------------- t3894286 1 --------------------------------------------------------------------------------------AGAAAGTAGTTTGCGGATAGAG-------------------------------- t1855898 1 --------------------------------------------------------------------------------------AGAAAGTAGTTTGCGGATAGAGAT------------------------------ t4190326 1 --------------------------------------------------------------------------------------AGAAAGTAGTTTGCGGATAGAGATA----------------------------- t4080587 1 ---------------------------------------------------------------------------------------GAAAGTAGTTTGCGGATAGAG-------------------------------- t0358518 4 ---------------------------------------------------------------------------------------GAAAGTAGTTTGCGGATAGAGA------------------------------- t4180767 1 ----------------------------------------------------------------------------------------AAAGTAGTTTGCGGATAGAGA------------------------------- t1090563 2 ----------------------------------------------------------------------------------------AAAGTAGTTTGCGGATAGAGAT------------------------------ t0255163 6 -----------------------------------------------------------------------------------------AAGTAGTTTGCGGATAGAGA------------------------------- t4186064 1 -----------------------------------------------------------------------------------------AAGTAGTTTGCGGATAGAGAT------------------------------ t0021372 45 -----------------------------------------------------------------------------------------AAGTAGTTTGCGGATAGAGATA----------------------------- t2104714 1 -----------------------------------------------------------------------------------------AAGTAGTTTGCGGATAGAGATAA---------------------------- t1956201 1 -----------------------------------------------------------------------------------------AAGTAGTTTGCGGATAGAGATAAC--------------------------- t4644811 1 ------------------------------------------------------------------------------------------AGTAGTTTGCGGATAGAGA------------------------------- t1195259 2 ------------------------------------------------------------------------------------------AGTAGTTTGCGGATAGAGAT------------------------------ t0794907 2 -------------------------------------------------------------------------------------------GTAGTTTGCGGATAGAGATA----------------------------- t4463267 1 -------------------------------------------------------------------------------------------GTAGTTTGCGGATAGAGATAA---------------------------- t0569998 3 --------------------------------------------------------------------------------------------TAGTTTGCGGATAGAGATAAC--------------------------- t3602866 1 -----------------------------------------------------------------------------------------------TTTGCGGATAGAGATAACGAA------------------------ t0303895 5 ------------------------------------------------------------------------------------------------TTGCGGATAGAGATAACGAAC----------------------- t0241255 6 -----------------------------------------------------------------------------------------------------GATAGAGATAACGAACTTGTCGT---------------- t2522884 1 ------------------------------------------------------------------------------------------------------ATAGAGATAACGAACTTGTCG----------------- t4091036 1 ------------------------------------------------------------------------------------------------------ATAGAGATAACGAACTTGTCGTAG-------------- t0383503 4 -------------------------------------------------------------------------------------------------------TAGAGATAACGAACTTGTCGTA--------------- t2337112 1 ----------------------------------------------------------------------------------------------------------AGATAACGAACTTGTCGTAGG------------- t4664728 1 ----------------------------------------------------------------------------------------------------------AGATAACGAACTTGTCGTAGGA------------ t0609124 3 ----------------------------------------------------------------------------------------------------------AGATAACGAACTTGTCGTAGGAT----------- t0133173 10 ----------------------------------------------------------------------------------------------------------AGATAACGAACTTGTCGTAGGATG---------- t0000423 945 ----------------------------------------------------------------------------------------------------------AGATAACGAACTTGTCGTAGGATGA--------- t0786384 2 -----------------------------------------------------------------------------------------------------------GATAACGAACTTGTCGTAGGAT----------- t0989637 2 -----------------------------------------------------------------------------------------------------------GATAACGAACTTGTCGTAGGATG---------- t0640050 3 -----------------------------------------------------------------------------------------------------------GATAACGAACTTGTCGTAGGATGA--------- t0638519 3 ------------------------------------------------------------------------------------------------------------ATAACGAACTTGTCGTAGGA------------ t4273923 1 ------------------------------------------------------------------------------------------------------------ATAACGAACTTGTCGTAGGAT----------- t0014755 60 ------------------------------------------------------------------------------------------------------------ATAACGAACTTGTCGTAGGATG---------- t0000898 533 ------------------------------------------------------------------------------------------------------------ATAACGAACTTGTCGTAGGATGA--------- t0045121 24 ------------------------------------------------------------------------------------------------------------ATAACGAACTTGTCGTAGGATGAG-------- t3147800 1 -------------------------------------------------------------------------------------------------------------TAACGAACTTGTCGTAGGA------------ t0182408 7 -------------------------------------------------------------------------------------------------------------TAACGAACTTGTCGTAGGAT----------- t0009088 88 -------------------------------------------------------------------------------------------------------------TAACGAACTTGTCGTAGGATG---------- t0000065 5144 -------------------------------------------------------------------------------------------------------------TAACGAACTTGTCGTAGGATGA--------- t0017729 52 -------------------------------------------------------------------------------------------------------------TAACGAACTTGTCGTAGGATGAG-------- t2320841 1 --------------------------------------------------------------------------------------------------------------AACGAACTTGTCGTAGGATG---------- t4162045 1 --------------------------------------------------------------------------------------------------------------AACGAACTTGTCGTAGGATGA--------- t0091812 13 --------------------------------------------------------------------------------------------------------------AACGAACTTGTCGTAGGATGAG-------- t0187760 7 --------------------------------------------------------------------------------------------------------------AACGAACTTGTCGTAGGATGAGC------- t1154745 2 ---------------------------------------------------------------------------------------------------------------ACGAACTTGTCGTAGGATG---------- t1064026 2 ---------------------------------------------------------------------------------------------------------------ACGAACTTGTCGTAGGATGAGCTG----- t0520209 3 ----------------------------------------------------------------------------------------------------------------CGAACTTGTCGTAGGATGA--------- t3729016 1 ----------------------------------------------------------------------------------------------------------------CGAACTTGTCGTAGGATGAGC------- t0267848 5 ----------------------------------------------------------------------------------------------------------------CGAACTTGTCGTAGGATGAGCTGA---- t2224353 1 -----------------------------------------------------------------------------------------------------------------GAACTTGTCGTAGGATGAGCTG----- t3346259 1 ------------------------------------------------------------------------------------------------------------------AACTTGTCGTAGGATGAGCT------ t0923889 2 ------------------------------------------------------------------------------------------------------------------AACTTGTCGTAGGATGAGCTG----- t0058242 20 ------------------------------------------------------------------------------------------------------------------AACTTGTCGTAGGATGAGCTGA---- t0078548 15 -------------------------------------------------------------------------------------------------------------------ACTTGTCGTAGGATGAGCTGA---- t2007981 1 -------------------------------------------------------------------------------------------------------------------ACTTGTCGTAGGATGAGCTGAA--- t2487402 1 --------------------------------------------------------------------------------------------------------------------CTTGTCGTAGGATGAGCTGAAGAT t4031312 1 ---------------------------------------------------------------------------------------------------------------------TTGTCGTAGGATGAGCTGAAG-- t0025998 38 ---------------------------------------------------------------------------------------------------------------------TTGTCGTAGGATGAGCTGAAGA- t0073923 16 // T37-m0004 scaffold1.0:2288737:2288872:+ 136(nt) -47.60(kcal/mol) ATTCAATTCATCCTCCAACAAGTCCGTGATCTCTATGCGCAATCTCTTAATTTATGATAAAATCAACAAAGAAATGCTATGAAAAGAAAGTAGTTTGCGGATAGAGATAACGAACTTGTCGTAGGATGAGCTGAAG T37-m0004 5562 .((((.((((((((.(.((((((.(((.((((((((.(((((.(((((......((((...)))).((.((.....)).))......))).)).))))).)))))))).))).)))))).).)))))))).)))). **********TCCTCCAACAAGTCCGTGATC********************************************************************************************************* T37-m0004-5p 497 ***********************************************************************************************************TAACGAACTTGTCGTAGGATG******** T37-m0004-3p 4913 --TCAATTCATCCTCCAACAAGT----------------------------------------------------------------------------------------------------------------- t1190889 1 --TCAATTCATCCTCCAACAAGTC---------------------------------------------------------------------------------------------------------------- t0850808 1 -------TCATCCTCCAACAAGTCCGTG------------------------------------------------------------------------------------------------------------ t0224198 4 --------CATCCTCCAACAAGTCCGTGA----------------------------------------------------------------------------------------------------------- t0087585 10 --------CATCCTCCAACAAGTCCGTGAT---------------------------------------------------------------------------------------------------------- t0176013 5 ---------ATCCTCCAACAAGTCCGTGATC--------------------------------------------------------------------------------------------------------- t0991699 1 ---------ATCCTCCAACAAGTCCGTGATCTC------------------------------------------------------------------------------------------------------- t2320884 1 ----------TCCTCCAACAAGTCCGTGA----------------------------------------------------------------------------------------------------------- t0282249 3 ----------TCCTCCAACAAGTCCGTGAT---------------------------------------------------------------------------------------------------------- t0046256 17 ----------TCCTCCAACAAGTCCGTGATC--------------------------------------------------------------------------------------------------------- t0001474 338 ----------TCCTCCAACAAGTCCGTGATCT-------------------------------------------------------------------------------------------------------- t0005602 109 ----------TCCTCCAACAAGTCCGTGATCTCT------------------------------------------------------------------------------------------------------ t0563154 2 -----------CCTCCAACAAGTCCGTGATCT-------------------------------------------------------------------------------------------------------- t3639700 1 ------------CTCCAACAAGTCCGTGATCTC------------------------------------------------------------------------------------------------------- t1205890 1 -------------TCCAACAAGTCCGTGATCTCT------------------------------------------------------------------------------------------------------ t0377282 3 -------------TCCAACAAGTCCGTGATCTCTA----------------------------------------------------------------------------------------------------- t0658463 2 --------------CCAACAAGTCCGTGATCTCTA----------------------------------------------------------------------------------------------------- t3067880 1 ----------------AACAAGTCCGTGATCTCTATG--------------------------------------------------------------------------------------------------- t1010758 1 -----------------ACAAGTCCGTGATCTCTATGC-------------------------------------------------------------------------------------------------- t0090253 9 -----------------ACAAGTCCGTGATCTCTATGCGCA----------------------------------------------------------------------------------------------- t0595154 2 --------------------AGTCCGTGATCTCTATGCGCA----------------------------------------------------------------------------------------------- t1603658 1 ---------------------GTCCGTGATCTCTATGCGCAA---------------------------------------------------------------------------------------------- t2219808 1 ----------------------TCCGTGATCTCTATGCGCAAT--------------------------------------------------------------------------------------------- t0943707 1 -------------------------------TCTATGCGCAATCTCTTAATT------------------------------------------------------------------------------------ t1620968 1 --------------------------------CTATGCGCAATCTCTTAATTT----------------------------------------------------------------------------------- t0799987 2 ---------------------------------TATGCGCAATCTCTTAATTTA---------------------------------------------------------------------------------- t2000663 1 -------------------------------------------------------------------------ATGCTATGAAAAGAAAGTAGTT----------------------------------------- t3479360 1 ----------------------------------------------------------------------------CTATGAAAAGAAAGTAGTTTG--------------------------------------- t2047439 1 -----------------------------------------------------------------------------TATGAAAAGAAAGTAGTTTG--------------------------------------- t3474047 1 -----------------------------------------------------------------------------TATGAAAAGAAAGTAGTTTGC-------------------------------------- t0537214 2 -----------------------------------------------------------------------------TATGAAAAGAAAGTAGTTTGCG------------------------------------- t0347369 3 ------------------------------------------------------------------------------ATGAAAAGAAAGTAGTTTGCG------------------------------------- t0173059 5 -------------------------------------------------------------------------------TGAAAAGAAAGTAGTTTGCGG------------------------------------ t0189098 5 -------------------------------------------------------------------------------TGAAAAGAAAGTAGTTTGCGGA----------------------------------- t0352191 3 --------------------------------------------------------------------------------GAAAAGAAAGTAGTTTGCGGATAG-------------------------------- t2533313 1 ---------------------------------------------------------------------------------AAAAGAAAGTAGTTTGCGGAT---------------------------------- t0070250 12 ---------------------------------------------------------------------------------AAAAGAAAGTAGTTTGCGGATAGAG------------------------------ t2434077 1 ----------------------------------------------------------------------------------AAAGAAAGTAGTTTGCGGAT---------------------------------- t3116790 1 ----------------------------------------------------------------------------------AAAGAAAGTAGTTTGCGGATAG-------------------------------- t1780978 1 ----------------------------------------------------------------------------------AAAGAAAGTAGTTTGCGGATAGAG------------------------------ t3265971 1 -----------------------------------------------------------------------------------AAGAAAGTAGTTTGCGGATAG-------------------------------- t0081435 10 -----------------------------------------------------------------------------------AAGAAAGTAGTTTGCGGATAGAG------------------------------ t0175571 5 ------------------------------------------------------------------------------------AGAAAGTAGTTTGCGGATAGAG------------------------------ t1710400 1 ------------------------------------------------------------------------------------AGAAAGTAGTTTGCGGATAGAGAT---------------------------- t1994957 1 -------------------------------------------------------------------------------------GAAAGTAGTTTGCGGATAGAG------------------------------ t2487795 1 -------------------------------------------------------------------------------------GAAAGTAGTTTGCGGATAGAGA----------------------------- t1980789 1 --------------------------------------------------------------------------------------AAAGTAGTTTGCGGATAGAG------------------------------ t0481640 2 --------------------------------------------------------------------------------------AAAGTAGTTTGCGGATAGAGA----------------------------- t2273131 1 --------------------------------------------------------------------------------------AAAGTAGTTTGCGGATAGAGAT---------------------------- t0198375 5 ---------------------------------------------------------------------------------------AAGTAGTTTGCGGATAGAGAT---------------------------- t0032861 23 ---------------------------------------------------------------------------------------AAGTAGTTTGCGGATAGAGATA--------------------------- t2077794 1 ---------------------------------------------------------------------------------------AAGTAGTTTGCGGATAGAGATAA-------------------------- t1859012 1 -----------------------------------------------------------------------------------------GTAGTTTGCGGATAGAGATA--------------------------- t2399745 1 -----------------------------------------------------------------------------------------GTAGTTTGCGGATAGAGATAAC------------------------- t0849357 1 ------------------------------------------------------------------------------------------TAGTTTGCGGATAGAGATAAC------------------------- t0458433 2 --------------------------------------------------------------------------------------------GTTTGCGGATAGAGATAACGAA---------------------- t1887442 1 ---------------------------------------------------------------------------------------------TTTGCGGATAGAGATAACGAA---------------------- t0526883 2 ----------------------------------------------------------------------------------------------TTGCGGATAGAGATAACGAAC--------------------- t0172312 5 ----------------------------------------------------------------------------------------------TTGCGGATAGAGATAACGAACT-------------------- t3073649 1 ---------------------------------------------------------------------------------------------------GATAGAGATAACGAACTTGTCGT-------------- t2696102 1 ---------------------------------------------------------------------------------------------------GATAGAGATAACGAACTTGTCGTA------------- t3395920 1 ----------------------------------------------------------------------------------------------------ATAGAGATAACGAACTTGTCG--------------- t1849479 1 ----------------------------------------------------------------------------------------------------ATAGAGATAACGAACTTGTCGT-------------- t1063318 1 ----------------------------------------------------------------------------------------------------ATAGAGATAACGAACTTGTCGTA------------- t2447547 1 --------------------------------------------------------------------------------------------------------AGATAACGAACTTGTCGTAGGA---------- t2527154 1 --------------------------------------------------------------------------------------------------------AGATAACGAACTTGTCGTAGGAT--------- t0106796 8 --------------------------------------------------------------------------------------------------------AGATAACGAACTTGTCGTAGGATG-------- t0002133 250 --------------------------------------------------------------------------------------------------------AGATAACGAACTTGTCGTAGGATGA------- t2181665 1 ---------------------------------------------------------------------------------------------------------GATAACGAACTTGTCGTAGGATG-------- t0748229 2 ----------------------------------------------------------------------------------------------------------ATAACGAACTTGTCGTAGGA---------- t2119330 1 ----------------------------------------------------------------------------------------------------------ATAACGAACTTGTCGTAGGAT--------- t0016151 43 ----------------------------------------------------------------------------------------------------------ATAACGAACTTGTCGTAGGATG-------- t0002504 216 ----------------------------------------------------------------------------------------------------------ATAACGAACTTGTCGTAGGATGA------- t0128686 7 -----------------------------------------------------------------------------------------------------------TAACGAACTTGTCGTAGGA---------- t0101129 8 -----------------------------------------------------------------------------------------------------------TAACGAACTTGTCGTAGGAT--------- t0009888 66 -----------------------------------------------------------------------------------------------------------TAACGAACTTGTCGTAGGATG-------- t0000076 4239 -----------------------------------------------------------------------------------------------------------TAACGAACTTGTCGTAGGATGA------- t0015610 44 -----------------------------------------------------------------------------------------------------------TAACGAACTTGTCGTAGGATGAG------ t2398194 1 ------------------------------------------------------------------------------------------------------------AACGAACTTGTCGTAGGAT--------- t2890800 1 ------------------------------------------------------------------------------------------------------------AACGAACTTGTCGTAGGATG-------- t0329644 3 ------------------------------------------------------------------------------------------------------------AACGAACTTGTCGTAGGATGA------- t0223805 4 ------------------------------------------------------------------------------------------------------------AACGAACTTGTCGTAGGATGAG------ t0570872 2 ------------------------------------------------------------------------------------------------------------AACGAACTTGTCGTAGGATGAGC----- t0687930 2 -------------------------------------------------------------------------------------------------------------ACGAACTTGTCGTAGGATG-------- t1988684 1 --------------------------------------------------------------------------------------------------------------CGAACTTGTCGTAGGATGAGC----- t0066097 12 --------------------------------------------------------------------------------------------------------------CGAACTTGTCGTAGGATGAGCT---- t2820356 1 ---------------------------------------------------------------------------------------------------------------GAACTTGTCGTAGGATGAGCTG--- t0806714 2 ----------------------------------------------------------------------------------------------------------------AACTTGTCGTAGGATGAGCT---- t3650364 1 ----------------------------------------------------------------------------------------------------------------AACTTGTCGTAGGATGAGCTG--- t0097720 9 ----------------------------------------------------------------------------------------------------------------AACTTGTCGTAGGATGAGCTGA-- t0106587 8 -----------------------------------------------------------------------------------------------------------------ACTTGTCGTAGGATGAGCTG--- t1181621 1 -----------------------------------------------------------------------------------------------------------------ACTTGTCGTAGGATGAGCTGA-- t1934927 1 // novel227 T24-m0278 scaffold393.0:361944:362077:+ 134(nt) -52.53(kcal/mol) TCATATTTTGTCCAAGTTGAAGGGTACTCATGAAGAAAAGATATTTCTAGTTCCCCACTAATCTCCACAAAATGATAGGTTTAAAAATGAAAACTTTTCTTCATGAGTAACCTTCAACTTTGACAAAATAGGAC T24-m0278 29 ((.(((((((((.((((((((((.((((((((((((((((...((((.........(((.(((..........))).)))........)))).)))))))))))))))).)))))))))).))))))))).)). **********TCCAAGTTGAAGGGTACTCAT******************************************************************************************************* T24-m0278-5p 28 ********************************************************************************************************GAGTAACCTTCAACTTTGACA********* T24-m0278-3p 1 ----------TCCAAGTTGAAGGGTACTCA-------------------------------------------------------------------------------------------------------- t0745464 2 ----------TCCAAGTTGAAGGGTACTCAT------------------------------------------------------------------------------------------------------- t0042121 26 ---------------------------------------------------------------------------------------------------------AGTAACCTTCAACTTTGACAA-------- t2175554 1 // novel230 T37-m0319 scaffold40.0:732166:732293:+ 128(nt) -63.10(kcal/mol) TAATTCGTATGAGATAAGAGTTTGTCATCTTCATTGTGAAGCGTACAAGAAAGCTCGATGCATCTTGCAGCTGAGAAGAATATTGGTGGTCTCAGAATGAAGATGACAAACTCTATCTCGTACGAATT T37-m0319 126 .(((((((((((((((.((((((((((((((((((.(((..(...(((.....((((.(((.....)))..)))).......)))...)..))).))))))))))))))))))))))))))))))))) *************ATAAGAGTTTGTCATCTTCATT********************************************************************************************* T37-m0319-5p 1 *************************************************************************************************TGAAGATGACAAACTCTATCT********** T37-m0319-3p 121 -------TATGAGATAAGAGTTTGTCATC--------------------------------------------------------------------------------------------------- t2727653 1 -------------ATAAGAGTTTGTCATCTTCATT--------------------------------------------------------------------------------------------- t2680192 1 ------------------------------------------------------------------------------------------CTCAGAATGAAGATGACAAAC----------------- t2747563 1 -------------------------------------------------------------------------------------------TCAGAATGAAGATGACAAACT---------------- t1567785 1 -----------------------------------------------------------------------------------------------AATGAAGATGACAAACTCTAT------------ t0632965 2 ------------------------------------------------------------------------------------------------ATGAAGATGACAAACTCTA------------- t2600513 1 ------------------------------------------------------------------------------------------------ATGAAGATGACAAACTCTATC----------- t2427646 1 -------------------------------------------------------------------------------------------------TGAAGATGACAAACTCTAT------------ t3202390 1 -------------------------------------------------------------------------------------------------TGAAGATGACAAACTCTATC----------- t0091062 9 -------------------------------------------------------------------------------------------------TGAAGATGACAAACTCTATCT---------- t0005873 105 --------------------------------------------------------------------------------------------------GAAGATGACAAACTCTATCTC--------- t1340914 1 ---------------------------------------------------------------------------------------------------AAGATGACAAACTCTATCTC--------- t2666150 1 ------------------------------------------------------------------------------------------------------ATGACAAACTCTATCTCGTAC----- t2234005 1 // novel261 T24-m0325 scaffold48.0:686769:686890:- 122(nt) -50.00(kcal/mol) GGCTTTAAGGAAGTTGTTGGAATGGAAGGGTAGGAAAGAAGAAACTTCTCTTCTATTTTCCAAATTCAAGAGAGAAAATTTCTTTCCTATCCCTCCCATTCCTTCAATTTGCTAAAGTTTCT T24-m0325 3819 (((((((.(.((((((..(((((((.(((((((((((((((....(((((((..(((.....)))..)))))))....))))))))))).)))).)))))))..)))))).))))))))... ********************AATGGAAGGGTAGGAAAGAAG********************************************************************************* T24-m0325-5p 3686 ********************************************************************************TCTTTCCTATCCCTCCCATTCC******************** T24-m0325-3p 98 ----TTAAGGAAGTTGTTGGAATGGA------------------------------------------------------------------------------------------------ t2450387 1 ----------AAGTTGTTGGAATGGAAGGGTAGG---------------------------------------------------------------------------------------- t2550051 1 -----------AGTTGTTGGAATGGAAGGGTA------------------------------------------------------------------------------------------ t1085376 2 --------------TGTTGGAATGGAAGGGTAGGA--------------------------------------------------------------------------------------- t1029010 2 --------------TGTTGGAATGGAAGGGTAGGAA-------------------------------------------------------------------------------------- t2721281 1 --------------TGTTGGAATGGAAGGGTAGGAAAG------------------------------------------------------------------------------------ t1281457 1 ---------------GTTGGAATGGAAGGGTAGGAA-------------------------------------------------------------------------------------- t0910032 2 ----------------TTGGAATGGAAGGGTAGGAA-------------------------------------------------------------------------------------- t4236890 1 ----------------TTGGAATGGAAGGGTAGGAAA------------------------------------------------------------------------------------- t0052539 21 -----------------TGGAATGGAAGGGTAGGAAAG------------------------------------------------------------------------------------ t5520590 1 -------------------GAATGGAAGGGTAGGAAAGAA---------------------------------------------------------------------------------- t0541208 3 --------------------AATGGAAGGGTAGGAAAGA----------------------------------------------------------------------------------- t0008230 95 --------------------AATGGAAGGGTAGGAAAGAA---------------------------------------------------------------------------------- t0004135 160 --------------------AATGGAAGGGTAGGAAAGAAG--------------------------------------------------------------------------------- t0000115 3235 --------------------AATGGAAGGGTAGGAAAGAAGA-------------------------------------------------------------------------------- t0005167 136 --------------------AATGGAAGGGTAGGAAAGAAGAA------------------------------------------------------------------------------- t0049321 22 --------------------AATGGAAGGGTAGGAAAGAAGAAA------------------------------------------------------------------------------ t0408247 4 --------------------AATGGAAGGGTAGGAAAGAAGAAAC----------------------------------------------------------------------------- t3044659 1 ---------------------ATGGAAGGGTAGGAAAGAA---------------------------------------------------------------------------------- t3814333 1 ---------------------ATGGAAGGGTAGGAAAGAAG--------------------------------------------------------------------------------- t0528525 3 ---------------------ATGGAAGGGTAGGAAAGAAGA-------------------------------------------------------------------------------- t0144701 9 ---------------------ATGGAAGGGTAGGAAAGAAGAAAC----------------------------------------------------------------------------- t0554545 3 ----------------------TGGAAGGGTAGGAAAGAAG--------------------------------------------------------------------------------- t0091734 13 --------------------------AGGGTAGGAAAGAAGAAACTT--------------------------------------------------------------------------- t0587947 3 --------------------------------------------------------------------------------TCTTTCCTATCCCTCCCATTCC-------------------- t0008159 96 ---------------------------------------------------------------------------------CTTTCCTATCCCTCCCATTCC-------------------- t2245451 1 ----------------------------------------------------------------------------------TTTCCTATCCCTCCCATTCC-------------------- t3910385 1 // T37-m0362 scaffold48.0:686769:686890:- 122(nt) -50.00(kcal/mol) GGCTTTAAGGAAGTTGTTGGAATGGAAGGGTAGGAAAGAAGAAACTTCTCTTCTATTTTCCAAATTCAAGAGAGAAAATTTCTTTCCTATCCCTCCCATTCCTTCAATTTGCTAAAGTTTCT T37-m0362 3618 (((((((.(.((((((..(((((((.(((((((((((((((....(((((((..(((.....)))..)))))))....))))))))))).)))).)))))))..)))))).))))))))... ********************AATGGAAGGGTAGGAAAGAAG********************************************************************************* T37-m0362-5p 3499 ********************************************************************************TCTTTCCTATCCCTCCCATTCC******************** T37-m0362-3p 86 -----------AGTTGTTGGAATGGAAGGGTA------------------------------------------------------------------------------------------ t2218266 1 -----------AGTTGTTGGAATGGAAGGGTAGGA--------------------------------------------------------------------------------------- t0480675 2 --------------TGTTGGAATGGAAGGGTAGGA--------------------------------------------------------------------------------------- t0175900 5 --------------TGTTGGAATGGAAGGGTAGGAAA------------------------------------------------------------------------------------- t1459580 1 ----------------TTGGAATGGAAGGGTAGGAA-------------------------------------------------------------------------------------- t0575747 2 ----------------TTGGAATGGAAGGGTAGGAAA------------------------------------------------------------------------------------- t0035538 21 ----------------TTGGAATGGAAGGGTAGGAAAG------------------------------------------------------------------------------------ t1580270 1 -------------------GAATGGAAGGGTAGGAAAGA----------------------------------------------------------------------------------- t0324325 3 -------------------GAATGGAAGGGTAGGAAAGAA---------------------------------------------------------------------------------- t0087486 10 --------------------AATGGAAGGGTAGGAAAGA----------------------------------------------------------------------------------- t0005182 117 --------------------AATGGAAGGGTAGGAAAGAA---------------------------------------------------------------------------------- t0003627 159 --------------------AATGGAAGGGTAGGAAAGAAG--------------------------------------------------------------------------------- t0000132 2769 --------------------AATGGAAGGGTAGGAAAGAAGA-------------------------------------------------------------------------------- t0001683 304 --------------------AATGGAAGGGTAGGAAAGAAGAA------------------------------------------------------------------------------- t0014775 46 --------------------AATGGAAGGGTAGGAAAGAAGAAA------------------------------------------------------------------------------ t0093230 9 --------------------AATGGAAGGGTAGGAAAGAAGAAAC----------------------------------------------------------------------------- t0201166 5 ---------------------ATGGAAGGGTAGGAAAGAAG--------------------------------------------------------------------------------- t0097709 9 ---------------------ATGGAAGGGTAGGAAAGAAGA-------------------------------------------------------------------------------- t0034582 22 ---------------------ATGGAAGGGTAGGAAAGAAGAA------------------------------------------------------------------------------- t0133147 7 ---------------------ATGGAAGGGTAGGAAAGAAGAAA------------------------------------------------------------------------------ t0507609 2 ---------------------ATGGAAGGGTAGGAAAGAAGAAAC----------------------------------------------------------------------------- t0039247 19 ----------------------TGGAAGGGTAGGAAAGAAG--------------------------------------------------------------------------------- t0042124 18 --------------------------------------------------------------------------------TCTTTCCTATCCCTCCCATTCC-------------------- t0007425 84 ----------------------------------------------------------------------------------TTTCCTATCCCTCCCATTCC-------------------- t0515267 2 // novel289 T24-m0372 scaffold570.0:250121:250397:+ 277(nt) -161.40(kcal/mol) CAACAGGCCATCTGAAAATCAGATCTGACAAACCACCGCAATTCGCCATGGCAAGCCAGGATAGGAATGAGATTTCACCAAACTCGCAGCACACCCTCCTCCTTCTCTCAATAGACTTGTCTTCTCCCTCAAATGGTAAATAGGATGAAAGAATGGACAAATCCGTTAAGAGAAAAAGGAGAGCGAGCCGCGAGTTTGGTCAAATCTCACACCTACCCTTGCTAACCATGGCGGAGTGCAGTGGTTTGTCAGATCTGATTTTCAGATGGCCAGTTGG T24-m0372 107 ((((.(((((((((((((((((((((((((((((((.(((.((((((((((..(((.(((.((((..((((((((.(((((((((((.((.(.(.(((((..((((((.((..((.((((((..((..(((..(........)..)))..))..)))))).))..)).))))))..))))).).).)).))))))))))).))))))))..)))).))).)))..)))))))))).))).))))))))))))))))))))))))))))))).)))). **********TCTGAAAATCAGATCTGACAA****************************************************************************************************************************************************************************************************************************************************** T24-m0372-5p 104 *******************************************************************************************************************************************************************************************************************************************************GTCAGATCTGATTTTCAGATG********* T24-m0372-3p 1 ----------TCTGAAAATCAGATCTGACA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TCTGAAAATCAGATCTGACAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TCTGAAAATCAGATCTGACAAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------TGAAAATCAGATCTGACAAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------TGAAAATCAGATCTGACAAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTTGTCAGATC -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTTGTCAGATC -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTCAGATC // T37-m0395 scaffold570.0:250121:250397:+ 277(nt) -161.40(kcal/mol) CAACAGGCCATCTGAAAATCAGATCTGACAAACCACCGCAATTCGCCATGGCAAGCCAGGATAGGAATGAGATTTCACCAAACTCGCAGCACACCCTCCTCCTTCTCTCAATAGACTTGTCTTCTCCCTCAAATGGTAAATAGGATGAAAGAATGGACAAATCCGTTAAGAGAAAAAGGAGAGCGAGCCGCGAGTTTGGTCAAATCTCACACCTACCCTTGCTAACCATGGCGGAGTGCAGTGGTTTGTCAGATCTGATTTTCAGATGGCCAGTTGG T37-m0395 104 ((((.(((((((((((((((((((((((((((((((.(((.((((((((((..(((.(((.((((..((((((((.(((((((((((.((.(.(.(((((..((((((.((..((.((((((..((..(((..(........)..)))..))..)))))).))..)).))))))..))))).).).)).))))))))))).))))))))..)))).))).)))..)))))))))).))).))))))))))))))))))))))))))))))).)))). **********TCTGAAAATCAGATCTGACAA****************************************************************************************************************************************************************************************************************************************************** T37-m0395-5p 98 *******************************************************************************************************************************************************************************************************************************************************GTCAGATCTGATTTTCAGATG********* T37-m0395-3p 2 ----------TCTGAAAATCAGATCTGACAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TCTGAAAATCAGATCTGACAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TCTGAAAATCAGATCTGACAAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------TGAAAATCAGATCTGACAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------TGAAAATCAGATCTGACAAAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------TGAAAATCAGATCTGACAAACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------AAATCAGATCTGACAAACCAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------CATGGCAAGCCAGGATAGGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------AGATTTCACCAAACTCGCAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGTTTGTCAGATC ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTCAGATC ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGTCAGATC // novel292 T24-m0376 scaffold588.0:45671:46019:- 349(nt) -119.52(kcal/mol) TTCAGGACGGTCCGATGAGTTGGCCATTCAAGAGTCCCTGGCTCTCAGTGTTCAGTGCGCTGGCTCTGTGTCCAACATGGGCCAACGCCTACTTGCTCGTTCCCGTCAAGTTGAATCATTGATGGCGGAGGTGGAGAGTCTTAAGCAAGAAATCAAACAGCTTAAGTACGAGAATCGAAGTTTGCACGTGCTTGCCAACAATTATTCGACAGGCATGAAGAGGAAGCTTGATGACCTTGATGACCGTCAAAGGCTTGCGGCTTTCTTCTAGAGGCACCTCTTTCCTGCATCATCTAGCGTTCCACCAAGGATTGGGATCTTGAATGATCTATCTTCGGTGCCTCCCGCT T24-m0376 31 ....(((.(((((((.((...(..(((((((((.((((..(((.((((((((((..(((.(((((((((.....))).)))))).)))..(((((..((....)).))))))))).)))))).)))...(((((((.(((((((((.............))))))).)).......((.(..((((((((((((.(...........).))))))))..(((((((((....(.(((((((....))).)))))....)))))))))..((((....))))....)))).).)).....))))))).......)))))))))))))..)..)).)))).)))))).... ************CGATGAGTTGGCCATTCAAGAGT************************************************************************************************************************************************************************************************************************************************************************************************************************** T24-m0376-5p 8 *****************************************************************************************************************************************************************************************************************************************************************************************************************************TCTTGAATGATCTATCTTCGGT********** T24-m0376-3p 22 ----------TCCGATGAGTTGGCCATTCAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------CGATGAGTTGGCCATTCAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------CGATGAGTTGGCCATTCAAGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------CGATGAGTTGGCCATTCAAGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------GATGAGTTGGCCATTCAAGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------TGAGTTGGCCATTCAAGAGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------TGAGTTGGCCATTCAAGAGTCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------AGAAATCAAACAGCTTAAGTACGA------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // T37-m0397 scaffold588.0:45671:46019:- 349(nt) -119.52(kcal/mol) TTCAGGACGGTCCGATGAGTTGGCCATTCAAGAGTCCCTGGCTCTCAGTGTTCAGTGCGCTGGCTCTGTGTCCAACATGGGCCAACGCCTACTTGCTCGTTCCCGTCAAGTTGAATCATTGATGGCGGAGGTGGAGAGTCTTAAGCAAGAAATCAAACAGCTTAAGTACGAGAATCGAAGTTTGCACGTGCTTGCCAACAATTATTCGACAGGCATGAAGAGGAAGCTTGATGACCTTGATGACCGTCAAAGGCTTGCGGCTTTCTTCTAGAGGCACCTCTTTCCTGCATCATCTAGCGTTCCACCAAGGATTGGGATCTTGAATGATCTATCTTCGGTGCCTCCCGCT T37-m0397 32 ....(((.(((((((.((...(..(((((((((.((((..(((.((((((((((..(((.(((((((((.....))).)))))).)))..(((((..((....)).))))))))).)))))).)))...(((((((.(((((((((.............))))))).)).......((.(..((((((((((((.(...........).))))))))..(((((((((....(.(((((((....))).)))))....)))))))))..((((....))))....)))).).)).....))))))).......)))))))))))))..)..)).)))).)))))).... ************CGATGAGTTGGCCATTCAAGAGT************************************************************************************************************************************************************************************************************************************************************************************************************************** T37-m0397-5p 6 *****************************************************************************************************************************************************************************************************************************************************************************************************************************TCTTGAATGATCTATCTTCGGT********** T37-m0397-3p 25 ---AGGACGGTCCGATGAGTTGGCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TCCGATGAGTTGGCCATTCAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------CGATGAGTTGGCCATTCAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------CGATGAGTTGGCCATTCAAGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------CGATGAGTTGGCCATTCAAGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------CGATGAGTTGGCCATTCAAGAGTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------GATGAGTTGGCCATTCAAGAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // novel3 T24-m0003 scaffold1.0:3610315:3610435:+ 121(nt) -58.50(kcal/mol) GGATGAATAACAGTGCAATTCTCCTTTGGCAGAAGTCATTCTGGTGCATGTACTCTTGAGTACTGTCGCTGGATACATATATATGCTTTCTGCCAAAGGAGAATTGCCCTGCAATTCAAAA T24-m0003 34 ...(((((..(((.(((((((((((((((((((((.(((((..(((((.(((((....))))))).)))..)).........))).))))))))))))))))))))).)))..)))))... ************GTGCAATTCTCCTTTGGCAGA**************************************************************************************** T24-m0003-5p 1 ******************************************************************************************TGCCAAAGGAGAATTGCCCTG********** T24-m0003-3p 33 ------------GTGCAATTCTCCTTTGGCAGA---------------------------------------------------------------------------------------- t1774220 1 ----------------------------------------------------------------------------------------TCTGCCAAAGGAGAATTGCCC------------ t4417809 1 ------------------------------------------------------------------------------------------TGCCAAAGGAGAATTGCCCTG---------- t0032572 32 // T37-m0005 scaffold1.0:3610315:3610435:+ 121(nt) -58.50(kcal/mol) GGATGAATAACAGTGCAATTCTCCTTTGGCAGAAGTCATTCTGGTGCATGTACTCTTGAGTACTGTCGCTGGATACATATATATGCTTTCTGCCAAAGGAGAATTGCCCTGCAATTCAAAA T37-m0005 30 ...(((((..(((.(((((((((((((((((((((.(((((..(((((.(((((....))))))).)))..)).........))).))))))))))))))))))))).)))..)))))... ************GTGCAATTCTCCTTTGGCAGA**************************************************************************************** T37-m0005-5p 2 ******************************************************************************************TGCCAAAGGAGAATTGCCCTG********** T37-m0005-3p 28 ------------GTGCAATTCTCCTTTGGCAGA---------------------------------------------------------------------------------------- t1589557 1 ------------GTGCAATTCTCCTTTGGCAGAAGT------------------------------------------------------------------------------------- t2566899 1 ----------------------------------------------------------------------------------------TCTGCCAAAGGAGAATTGCCC------------ t2332708 1 ------------------------------------------------------------------------------------------TGCCAAAGGAGAATTGCCCT----------- t0239097 4 ------------------------------------------------------------------------------------------TGCCAAAGGAGAATTGCCCTG---------- t0032977 23 // novel349 T24-m0458 scaffold862.0:54349:54538:- 190(nt) -84.50(kcal/mol) ATCTTCAACGTGGTGTTTGGATGGACGTGTTAAGATCCTACAAAATTTTCATTTCTTTGAAAATATTTGTACAAGGTGAATCACTCGGAGTACAAAATCAGAGGAAAATTTTTGGTACTTCTCATACTTTTGAGGGGTTCACCTTGTTGTAAGATCTTAATAAGTTCATCCAAACACCATATTGAGGATG T24-m0458 17271 ((((((((..((((((((((((((((.((((((((((.((((..(((((((......)))))))......((((((((((((.(((((((((....((((((((....))))))))........))).)))))).)))))))))))))))).)))))))))).))))))))))))))))..)))))))). **********TGGTGTTTGGATGGACGTGTT*************************************************************************************************************************************************************** T24-m0458-5p 16250 ****************************************************************************************************************************************************************TAAGTTCATCCAAACACCATA********* T24-m0458-3p 188 ATCTTCAACGTGGTGTTTGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0307159 5 -TCTTCAACGTGGTGTTTGGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0144146 9 ---TTCAACGTGGTGTTTGGATGGACG------------------------------------------------------------------------------------------------------------------------------------------------------------------- t4108197 1 ----TCAACGTGGTGTTTGGATGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2967717 1 ----TCAACGTGGTGTTTGGATGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0354803 4 -----CAACGTGGTGTTTGGATGGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0717964 2 -----CAACGTGGTGTTTGGATGGACG------------------------------------------------------------------------------------------------------------------------------------------------------------------- t4839087 1 ------AACGTGGTGTTTGGATGGACGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t1068163 2 -------ACGTGGTGTTTGGATGGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0498661 3 -------ACGTGGTGTTTGGATGGACG------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0036475 29 -------ACGTGGTGTTTGGATGGACGT------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0336452 4 -------ACGTGGTGTTTGGATGGACGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------- t0344128 4 -------ACGTGGTGTTTGGATGGACGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0001984 281 -------ACGTGGTGTTTGGATGGACGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0038839 27 --------CGTGGTGTTTGGATGGACGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0209033 7 ---------GTGGTGTTTGGATGGACGT------------------------------------------------------------------------------------------------------------------------------------------------------------------ t1244495 2 ---------GTGGTGTTTGGATGGACGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------- t0184488 7 ---------GTGGTGTTTGGATGGACGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0058518 20 ---------GTGGTGTTTGGATGGACGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0547324 3 ----------TGGTGTTTGGATGGACGT------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0009802 83 ----------TGGTGTTTGGATGGACGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------- t0004293 155 ----------TGGTGTTTGGATGGACGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0000123 3068 ----------TGGTGTTTGGATGGACGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0000034 11739 ----------TGGTGTTTGGATGGACGTGTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------- t0010074 81 ----------TGGTGTTTGGATGGACGTGTTAA------------------------------------------------------------------------------------------------------------------------------------------------------------- t1089227 2 ----------TGGTGTTTGGATGGACGTGTTAAG------------------------------------------------------------------------------------------------------------------------------------------------------------ t0486495 3 -----------GGTGTTTGGATGGACGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------- t0030971 33 -----------GGTGTTTGGATGGACGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0028035 36 -----------GGTGTTTGGATGGACGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0022890 42 -----------GGTGTTTGGATGGACGTGTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------- t0004875 142 -----------GGTGTTTGGATGGACGTGTTAA------------------------------------------------------------------------------------------------------------------------------------------------------------- t0645345 3 -----------GGTGTTTGGATGGACGTGTTAAG------------------------------------------------------------------------------------------------------------------------------------------------------------ t3572505 1 -----------GGTGTTTGGATGGACGTGTTAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------- t1360467 1 ------------GTGTTTGGATGGACGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t2661220 1 ------------GTGTTTGGATGGACGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t4060930 1 ------------GTGTTTGGATGGACGTGTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------- t0749610 2 ------------GTGTTTGGATGGACGTGTTAA------------------------------------------------------------------------------------------------------------------------------------------------------------- t0068664 17 ------------GTGTTTGGATGGACGTGTTAAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------- t0064118 18 ------------GTGTTTGGATGGACGTGTTAAGATC--------------------------------------------------------------------------------------------------------------------------------------------------------- t2810738 1 -------------TGTTTGGATGGACGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0314966 5 -------------TGTTTGGATGGACGTGTTAA------------------------------------------------------------------------------------------------------------------------------------------------------------- t0955724 2 -------------TGTTTGGATGGACGTGTTAAG------------------------------------------------------------------------------------------------------------------------------------------------------------ t0018164 51 -------------TGTTTGGATGGACGTGTTAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------- t0106498 12 -------------TGTTTGGATGGACGTGTTAAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------- t0033840 31 -------------TGTTTGGATGGACGTGTTAAGATC--------------------------------------------------------------------------------------------------------------------------------------------------------- t0001587 333 --------------GTTTGGATGGACGTGTTAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------- t1023793 2 ---------------TTTGGATGGACGTGTTAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------- t4649538 1 ---------------TTTGGATGGACGTGTTAAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------- t0014979 59 ----------------TTGGATGGACGTGTTAAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------- t0278317 5 ----------------TTGGATGGACGTGTTAAGATC--------------------------------------------------------------------------------------------------------------------------------------------------------- t0002948 209 -----------------TGGATGGACGTGTTAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------- t1957985 1 -----------------TGGATGGACGTGTTAAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------- t3158389 1 -----------------TGGATGGACGTGTTAAGATC--------------------------------------------------------------------------------------------------------------------------------------------------------- t0001023 479 -----------------TGGATGGACGTGTTAAGATCC-------------------------------------------------------------------------------------------------------------------------------------------------------- t0112159 11 -----------------TGGATGGACGTGTTAAGATCCT------------------------------------------------------------------------------------------------------------------------------------------------------- t5480602 1 -----------------TGGATGGACGTGTTAAGATCCTAC----------------------------------------------------------------------------------------------------------------------------------------------------- t1150982 2 ------------------GGATGGACGTGTTAAGATC--------------------------------------------------------------------------------------------------------------------------------------------------------- t3733100 1 -----------------------------------------------------------------------------------------------------------------------------------------------TTGTTGTAAGATCTTAATAAG-------------------------- t0665527 2 -----------------------------------------------------------------------------------------------------------------------------------------------TTGTTGTAAGATCTTAATAAGTT------------------------ t1583331 1 -----------------------------------------------------------------------------------------------------------------------------------------------------TAAGATCTTAATAAGTTCATC-------------------- t0855083 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAATAAGTTCATCCAAA---------------- t3702150 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAATAAGTTCATCCAAACACC------------ t5421240 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAATAAGTTCATCCAAA---------------- t0478073 3 ----------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAATAAGTTCATCCAAACACC------------ t0291519 5 ------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAAGTTCATCCAAACACC------------ t0090815 14 -------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAAGTTCATCCAAACACC------------ t0310122 5 --------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAGTTCATCCAAACACCA----------- t0986395 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGTTCATCCAAACACCA----------- t4608976 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGTTCATCCAAACACCAT---------- t0734900 2 ----------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACC------------ t5150576 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCA----------- t1251002 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCAT---------- t0603517 3 ----------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCATA--------- t0003760 173 --------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCCAAACACCATATTGA----- t0573560 3 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAAACACCATATTGAGGAT- t0612474 3 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAACACCATATTGAGGATG t2725893 1 // T37-m0495 scaffold862.0:54349:54538:- 190(nt) -84.50(kcal/mol) ATCTTCAACGTGGTGTTTGGATGGACGTGTTAAGATCCTACAAAATTTTCATTTCTTTGAAAATATTTGTACAAGGTGAATCACTCGGAGTACAAAATCAGAGGAAAATTTTTGGTACTTCTCATACTTTTGAGGGGTTCACCTTGTTGTAAGATCTTAATAAGTTCATCCAAACACCATATTGAGGATG T37-m0495 23535 ((((((((..((((((((((((((((.((((((((((.((((..(((((((......)))))))......((((((((((((.(((((((((....((((((((....))))))))........))).)))))).)))))))))))))))).)))))))))).))))))))))))))))..)))))))). **********TGGTGTTTGGATGGACGTGTT*************************************************************************************************************************************************************** T37-m0495-5p 22261 ****************************************************************************************************************************************************************TAAGTTCATCCAAACACCATA********* T37-m0495-3p 252 ATCTTCAACGTGGTGTTTGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0565317 2 -TCTTCAACGTGGTGTTTGGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0063060 13 ---TTCAACGTGGTGTTTGGATGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1682137 1 ---TTCAACGTGGTGTTTGGATGGACG------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1874738 1 ----TCAACGTGGTGTTTGGATGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0241060 4 -----CAACGTGGTGTTTGGATGGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0142058 6 ------AACGTGGTGTTTGGATGGACG------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0438456 2 ------AACGTGGTGTTTGGATGGACGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0333093 3 -------ACGTGGTGTTTGGATGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0356723 3 -------ACGTGGTGTTTGGATGGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0126284 7 -------ACGTGGTGTTTGGATGGACG------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0008889 72 -------ACGTGGTGTTTGGATGGACGT------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0039486 19 -------ACGTGGTGTTTGGATGGACGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------- t0032071 23 -------ACGTGGTGTTTGGATGGACGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0000472 838 -------ACGTGGTGTTTGGATGGACGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0006408 96 --------CGTGGTGTTTGGATGGACGT------------------------------------------------------------------------------------------------------------------------------------------------------------------ t1844308 1 --------CGTGGTGTTTGGATGGACGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------- t0256314 4 --------CGTGGTGTTTGGATGGACGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0009393 69 --------CGTGGTGTTTGGATGGACGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t2802654 1 ---------GTGGTGTTTGGATGGACGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------- t0072628 11 ---------GTGGTGTTTGGATGGACGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0031584 24 ---------GTGGTGTTTGGATGGACGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t3891429 1 ----------TGGTGTTTGGATGGACGT------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0005161 117 ----------TGGTGTTTGGATGGACGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------- t0001834 282 ----------TGGTGTTTGGATGGACGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0000065 4759 ----------TGGTGTTTGGATGGACGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0000028 14108 ----------TGGTGTTTGGATGGACGTGTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------- t0007583 83 ----------TGGTGTTTGGATGGACGTGTTAA------------------------------------------------------------------------------------------------------------------------------------------------------------- t0074722 11 ----------TGGTGTTTGGATGGACGTGTTAAG------------------------------------------------------------------------------------------------------------------------------------------------------------ t0583197 2 -----------GGTGTTTGGATGGACGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------- t0004783 124 -----------GGTGTTTGGATGGACGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0003942 147 -----------GGTGTTTGGATGGACGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0004570 129 -----------GGTGTTTGGATGGACGTGTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------- t0001286 374 -----------GGTGTTTGGATGGACGTGTTAA------------------------------------------------------------------------------------------------------------------------------------------------------------- t0767728 2 -----------GGTGTTTGGATGGACGTGTTAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------- t0286576 3 ------------GTGTTTGGATGGACGTGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0680200 2 ------------GTGTTTGGATGGACGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0178455 5 ------------GTGTTTGGATGGACGTGTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------- t0104723 8 ------------GTGTTTGGATGGACGTGTTAA------------------------------------------------------------------------------------------------------------------------------------------------------------- t0019862 36 ------------GTGTTTGGATGGACGTGTTAAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------- t0043666 18 -------------TGTTTGGATGGACGTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0363017 3 -------------TGTTTGGATGGACGTGTTAA------------------------------------------------------------------------------------------------------------------------------------------------------------- t0421370 2 -------------TGTTTGGATGGACGTGTTAAG------------------------------------------------------------------------------------------------------------------------------------------------------------ t0010523 62 -------------TGTTTGGATGGACGTGTTAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------- t0052086 15 -------------TGTTTGGATGGACGTGTTAAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------- t0007685 82 -------------TGTTTGGATGGACGTGTTAAGATC--------------------------------------------------------------------------------------------------------------------------------------------------------- t0000575 718 --------------GTTTGGATGGACGTGTTAAGATC--------------------------------------------------------------------------------------------------------------------------------------------------------- t2996810 1 ---------------TTTGGATGGACGTGTTAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------- t2674664 1 ---------------TTTGGATGGACGTGTTAAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------- t0006069 101 ---------------TTTGGATGGACGTGTTAAGATC--------------------------------------------------------------------------------------------------------------------------------------------------------- t1085016 1 ----------------TTGGATGGACGTGTTAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------- t0211465 4 ----------------TTGGATGGACGTGTTAAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------- t0352735 3 ----------------TTGGATGGACGTGTTAAGATC--------------------------------------------------------------------------------------------------------------------------------------------------------- t0001340 364 -----------------TGGATGGACGTGTTAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------- t1861614 1 -----------------TGGATGGACGTGTTAAGAT---------------------------------------------------------------------------------------------------------------------------------------------------------- t0404061 3 -----------------TGGATGGACGTGTTAAGATC--------------------------------------------------------------------------------------------------------------------------------------------------------- t0001012 457 -----------------TGGATGGACGTGTTAAGATCC-------------------------------------------------------------------------------------------------------------------------------------------------------- t0082102 10 -----------------TGGATGGACGTGTTAAGATCCT------------------------------------------------------------------------------------------------------------------------------------------------------- t3902622 1 -----------------TGGATGGACGTGTTAAGATCCTAC----------------------------------------------------------------------------------------------------------------------------------------------------- t0255411 4 ------------------GGATGGACGTGTTAAGATC--------------------------------------------------------------------------------------------------------------------------------------------------------- t1322164 1 -----------------------------------------------------------------------------------------------------------------------------------------------TTGTTGTAAGATCTTAATAAG-------------------------- t0891453 1 -----------------------------------------------------------------------------------------------------------------------------------------------------TAAGATCTTAATAAGTTCATC-------------------- t0681984 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTAATAAGTTCATCCAAA---------------- t0299535 3 ----------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAATAAGTTCATCCAAAC--------------- t2828834 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------TCTTAATAAGTTCATCCAAACACC------------ t0407288 3 -----------------------------------------------------------------------------------------------------------------------------------------------------------CTTAATAAGTTCATCCAAACACCA----------- t2977894 1 ------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAAGTTCATCCAAACAC------------- t0638620 2 ------------------------------------------------------------------------------------------------------------------------------------------------------------TTAATAAGTTCATCCAAACACC------------ t0036944 21 -------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAAGTTCATCCAAACACC------------ t0083063 10 -------------------------------------------------------------------------------------------------------------------------------------------------------------TAATAAGTTCATCCAAACACCATA--------- t0992074 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAGTTCATCCAAACACCA----------- t1161726 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGTTCATCCAAACACCAT---------- t0226460 4 ---------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAGTTCATCCAAACACCATA--------- t0597287 2 ----------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCAT---------- t0613325 2 ----------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCATA--------- t0002346 229 ----------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTCATCCAAACACCATAT-------- t0298791 3 --------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCCAAACACCATATTG------ t3295833 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATCCAAACACCATATTGA----- t1492445 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATCCAAACACCATATTGAG---- t1466394 1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAAACACCATATTGAGGAT- t2626636 1 // novel37 T24-m0042 scaffold120.0:419196:419295:- 100(nt) -47.10(kcal/mol) TGCACCTCCAACAGTTGAAGCTGCCAGCATGATCTAAGCTATCTTTGTATACAGGAAAGGCTATAGATCATGTGGTAGCTTCACCTGTTGAATGAAGCAC T24-m0042 242 (((..(..((((((.(((((((((((.(((((((((((((.(..(((....)))..).)))).)))))))))))))))))))).))))))...)..))). **********ACAGTTGAAGCTGCCAGCATGA******************************************************************** T24-m0042-5p 240 *********************************************************************ATGTGGTAGCTTCACCTGTTG********** T24-m0042-3p 1 ---ACCTCCAACAGTTGAAGCTGC---------------------------------------------------------------------------- t3415066 1 -------CCAACAGTTGAAGCTGCCAGCATG--------------------------------------------------------------------- t2964459 1 ---------AACAGTTGAAGCTGCCAGCATG--------------------------------------------------------------------- t0196536 7 ----------ACAGTTGAAGCTGCCAGCAT---------------------------------------------------------------------- t2773610 1 ----------ACAGTTGAAGCTGCCAGCATG--------------------------------------------------------------------- t0255781 6 ----------ACAGTTGAAGCTGCCAGCATGA-------------------------------------------------------------------- t0002720 221 ----------ACAGTTGAAGCTGCCAGCATGAT------------------------------------------------------------------- t0385878 4 ---------------------------------------------------------------------ATGTGGTAGCTTCACCTGTTG---------- t3390354 1 // T37-m0046 scaffold120.0:419196:419295:- 100(nt) -47.10(kcal/mol) TGCACCTCCAACAGTTGAAGCTGCCAGCATGATCTAAGCTATCTTTGTATACAGGAAAGGCTATAGATCATGTGGTAGCTTCACCTGTTGAATGAAGCAC T37-m0046 120 (((..(..((((((.(((((((((((.(((((((((((((.(..(((....)))..).)))).)))))))))))))))))))).))))))...)..))). **********ACAGTTGAAGCTGCCAGCATGA******************************************************************** T37-m0046-5p 118 *********************************************************************ATGTGGTAGCTTCACCTGTTG********** T37-m0046-3p 1 ---------AACAGTTGAAGCTGCCAGCATG--------------------------------------------------------------------- t0058908 14 ----------ACAGTTGAAGCTGCCAGCATG--------------------------------------------------------------------- t0265095 4 ----------ACAGTTGAAGCTGCCAGCATGA-------------------------------------------------------------------- t0006222 99 ----------ACAGTTGAAGCTGCCAGCATGATCT----------------------------------------------------------------- t2683798 1 -----------------------------------------TCTTTGTATACAGGAAAGGCT-------------------------------------- t2443908 1 ---------------------------------------------------------------------ATGTGGTAGCTTCACCTGTTG---------- t0816205 1 // novel370 T24-m0486 scaffold980.0:39076:39183:+ 108(nt) -44.60(kcal/mol) AGAGTAGATATGAGCCAAGGATGACTTGCCACAATCTCTAGTATGTGAATGCCCTTCAGTTCCACTTGGTATGCTTTGACAAGTCATCCTTGGTTCACCTTTGCTCTC T24-m0486 286 ((((((((..((((((((((((((((((.((.........((((....)))).....(((.((....))...))).)).))))))))))))))))))..)))))))). **********TGAGCCAAGGATGACTTGCCA***************************************************************************** T24-m0486-5p 278 ******************************************************************************ACAAGTCATCCTTGGTTCACC********* T24-m0486-3p 1 AGAGTAGATATGAGCCAAGGA--------------------------------------------------------------------------------------- t0310697 5 --AGTAGATATGAGCCAAGGATG------------------------------------------------------------------------------------- t1095131 2 ----------TGAGCCAAGGATGACTTGCCA----------------------------------------------------------------------------- t0002016 278 ------------------------------------------------------------------------------ACAAGTCATCCTTGGTTCACC--------- t4937534 1 // T24-m0489 scaffold980.0:102616:102723:- 108(nt) -44.60(kcal/mol) AGAGTAGATATGAGCCAAGGATGACTTGCCACAATCTCTAGTATGTGAATGCCCTTCAGTTCCACTTGGTATGCTTTGACAAGTCATCCTTGGTTCACCTTTGCTCTC T24-m0489 286 ((((((((..((((((((((((((((((.((.........((((....)))).....(((.((....))...))).)).))))))))))))))))))..)))))))). **********TGAGCCAAGGATGACTTGCCA***************************************************************************** T24-m0489-5p 278 ******************************************************************************ACAAGTCATCCTTGGTTCACC********* T24-m0489-3p 1 AGAGTAGATATGAGCCAAGGA--------------------------------------------------------------------------------------- t0310697 5 --AGTAGATATGAGCCAAGGATG------------------------------------------------------------------------------------- t1095131 2 ----------TGAGCCAAGGATGACTTGCCA----------------------------------------------------------------------------- t0002016 278 ------------------------------------------------------------------------------ACAAGTCATCCTTGGTTCACC--------- t4937534 1 // T37-m0526 scaffold980.0:39076:39183:+ 108(nt) -44.60(kcal/mol) AGAGTAGATATGAGCCAAGGATGACTTGCCACAATCTCTAGTATGTGAATGCCCTTCAGTTCCACTTGGTATGCTTTGACAAGTCATCCTTGGTTCACCTTTGCTCTC T37-m0526 341 ((((((((..((((((((((((((((((.((.........((((....)))).....(((.((....))...))).)).))))))))))))))))))..)))))))). **********TGAGCCAAGGATGACTTGCCA***************************************************************************** T37-m0526-5p 335 ******************************************************************************ACAAGTCATCCTTGGTTCACC********* T37-m0526-3p 2 AGAGTAGATATGAGCCAAGGA--------------------------------------------------------------------------------------- t0345216 3 --AGTAGATATGAGCCAAGGATGACT---------------------------------------------------------------------------------- t0922319 1 ---------ATGAGCCAAGGATGACTTGCCA----------------------------------------------------------------------------- t0346400 3 ----------TGAGCCAAGGATGACTTGCCA----------------------------------------------------------------------------- t0001513 332 ------------------------------------------------------------------------------ACAAGTCATCCTTGGTTCACC--------- t0705370 2 // T37-m0529 scaffold980.0:102616:102723:- 108(nt) -44.60(kcal/mol) AGAGTAGATATGAGCCAAGGATGACTTGCCACAATCTCTAGTATGTGAATGCCCTTCAGTTCCACTTGGTATGCTTTGACAAGTCATCCTTGGTTCACCTTTGCTCTC T37-m0529 341 ((((((((..((((((((((((((((((.((.........((((....)))).....(((.((....))...))).)).))))))))))))))))))..)))))))). **********TGAGCCAAGGATGACTTGCCA***************************************************************************** T37-m0529-5p 335 ******************************************************************************ACAAGTCATCCTTGGTTCACC********* T37-m0529-3p 2 AGAGTAGATATGAGCCAAGGA--------------------------------------------------------------------------------------- t0345216 3 --AGTAGATATGAGCCAAGGATGACT---------------------------------------------------------------------------------- t0922319 1 ---------ATGAGCCAAGGATGACTTGCCA----------------------------------------------------------------------------- t0346400 3 ----------TGAGCCAAGGATGACTTGCCA----------------------------------------------------------------------------- t0001513 332 ------------------------------------------------------------------------------ACAAGTCATCCTTGGTTCACC--------- t0705370 2 // novel371 T24-m0487 scaffold980.0:132687:132813:+ 127(nt) -47.10(kcal/mol) GAGTGCAATGGAGCCAAGGATGAATTGCCGGCGCTATAGATAATTAAGTTCATAAATGTGTATACATGCCACCAAAATCCGTATATATTTGCTTGCCGGCAATTTGTTCTTGGCTATGTTGGGTTCT T24-m0487 528 ((((.(((((.(((((((((..((((((((((......((.........)).(((((((((((..((.........))..)))))))))))...))))))))))..))))))))).))))).)))). **********GAGCCAAGGATGAATTGCCGG************************************************************************************************ T24-m0487-5p 489 *************************************************************************************************GGCAATTTGTTCTTGGCTATG********* T24-m0487-3p 39 ----------GAGCCAAGGATGAATTGCCGG------------------------------------------------------------------------------------------------ t0001088 453 -----------AGCCAAGGATGAATTGCCGG------------------------------------------------------------------------------------------------ t0033331 31 ------------GCCAAGGATGAATTGCCGG------------------------------------------------------------------------------------------------ t0288038 5 -----------------------------------------------------------------------------------------------CCGGCAATTTGTTCTTGGCTA----------- t0459818 3 ------------------------------------------------------------------------------------------------CGGCAATTTGTTCTTGGCTAT---------- t0796386 2 -------------------------------------------------------------------------------------------------GGCAATTTGTTCTTGGCTAT---------- t0333533 4 -------------------------------------------------------------------------------------------------GGCAATTTGTTCTTGGCTATG--------- t0034468 30 // T24-m0488 scaffold980.0:9256:9382:- 127(nt) -47.10(kcal/mol) GAGTGCAATGGAGCCAAGGATGAATTGCCGGCGCTATAGATAATTAAGTTCATAAATGTGTATACATGCCACCAAAATCCGTATATATTTGCTTGCCGGCAATTTGTTCTTGGCTATGTTGGGTTCT T24-m0488 528 ((((.(((((.(((((((((..((((((((((......((.........)).(((((((((((..((.........))..)))))))))))...))))))))))..))))))))).))))).)))). **********GAGCCAAGGATGAATTGCCGG************************************************************************************************ T24-m0488-5p 489 *************************************************************************************************GGCAATTTGTTCTTGGCTATG********* T24-m0488-3p 39 ----------GAGCCAAGGATGAATTGCCGG------------------------------------------------------------------------------------------------ t0001088 453 -----------AGCCAAGGATGAATTGCCGG------------------------------------------------------------------------------------------------ t0033331 31 ------------GCCAAGGATGAATTGCCGG------------------------------------------------------------------------------------------------ t0288038 5 -----------------------------------------------------------------------------------------------CCGGCAATTTGTTCTTGGCTA----------- t0459818 3 ------------------------------------------------------------------------------------------------CGGCAATTTGTTCTTGGCTAT---------- t0796386 2 -------------------------------------------------------------------------------------------------GGCAATTTGTTCTTGGCTAT---------- t0333533 4 -------------------------------------------------------------------------------------------------GGCAATTTGTTCTTGGCTATG--------- t0034468 30 // T37-m0527 scaffold980.0:132687:132813:+ 127(nt) -47.10(kcal/mol) GAGTGCAATGGAGCCAAGGATGAATTGCCGGCGCTATAGATAATTAAGTTCATAAATGTGTATACATGCCACCAAAATCCGTATATATTTGCTTGCCGGCAATTTGTTCTTGGCTATGTTGGGTTCT T37-m0527 408 ((((.(((((.(((((((((..((((((((((......((.........)).(((((((((((..((.........))..)))))))))))...))))))))))..))))))))).))))).)))). **********GAGCCAAGGATGAATTGCCGG************************************************************************************************ T37-m0527-5p 379 *************************************************************************************************GGCAATTTGTTCTTGGCTATG********* T37-m0527-3p 29 ----------GAGCCAAGGATGAATTGCCG------------------------------------------------------------------------------------------------- t2584521 1 ----------GAGCCAAGGATGAATTGCCGG------------------------------------------------------------------------------------------------ t0001371 357 -----------AGCCAAGGATGAATTGCCGG------------------------------------------------------------------------------------------------ t0047168 17 ------------GCCAAGGATGAATTGCCGG------------------------------------------------------------------------------------------------ t0392960 3 ------------GCCAAGGATGAATTGCCGGCG---------------------------------------------------------------------------------------------- t3868799 1 -----------------------------------------------------------------------------------------------CCGGCAATTTGTTCTTGGCTA----------- t0172162 5 ------------------------------------------------------------------------------------------------CGGCAATTTGTTCTTGGCTA----------- t1553245 1 ------------------------------------------------------------------------------------------------CGGCAATTTGTTCTTGGCTAT---------- t0241167 4 -------------------------------------------------------------------------------------------------GGCAATTTGTTCTTGGCTAT---------- t0138780 6 -------------------------------------------------------------------------------------------------GGCAATTTGTTCTTGGCTATG--------- t0068615 12 ---------------------------------------------------------------------------------------------------CAATTTGTTCTTGGCTATGTTG------ t2952588 1 // T37-m0528 scaffold980.0:9256:9382:- 127(nt) -47.10(kcal/mol) GAGTGCAATGGAGCCAAGGATGAATTGCCGGCGCTATAGATAATTAAGTTCATAAATGTGTATACATGCCACCAAAATCCGTATATATTTGCTTGCCGGCAATTTGTTCTTGGCTATGTTGGGTTCT T37-m0528 408 ((((.(((((.(((((((((..((((((((((......((.........)).(((((((((((..((.........))..)))))))))))...))))))))))..))))))))).))))).)))). **********GAGCCAAGGATGAATTGCCGG************************************************************************************************ T37-m0528-5p 379 *************************************************************************************************GGCAATTTGTTCTTGGCTATG********* T37-m0528-3p 29 ----------GAGCCAAGGATGAATTGCCG------------------------------------------------------------------------------------------------- t2584521 1 ----------GAGCCAAGGATGAATTGCCGG------------------------------------------------------------------------------------------------ t0001371 357 -----------AGCCAAGGATGAATTGCCGG------------------------------------------------------------------------------------------------ t0047168 17 ------------GCCAAGGATGAATTGCCGG------------------------------------------------------------------------------------------------ t0392960 3 ------------GCCAAGGATGAATTGCCGGCG---------------------------------------------------------------------------------------------- t3868799 1 -----------------------------------------------------------------------------------------------CCGGCAATTTGTTCTTGGCTA----------- t0172162 5 ------------------------------------------------------------------------------------------------CGGCAATTTGTTCTTGGCTA----------- t1553245 1 ------------------------------------------------------------------------------------------------CGGCAATTTGTTCTTGGCTAT---------- t0241167 4 -------------------------------------------------------------------------------------------------GGCAATTTGTTCTTGGCTAT---------- t0138780 6 -------------------------------------------------------------------------------------------------GGCAATTTGTTCTTGGCTATG--------- t0068615 12 ---------------------------------------------------------------------------------------------------CAATTTGTTCTTGGCTATGTTG------ t2952588 1 // novel39 T24-m0044 scaffold1203.0:9350:9440:- 91(nt) -20.10(kcal/mol) ATGAGCATTGCATGGGTAATCAATTTCATCCGCTTAATAAATGCTTCTGCTAAATCATTTTTGAGTATGAACATGAGGAACATGGTGTTCA T24-m0044 99 .(((((((..((((.....(((..(((((..((((((.(((((.((......)).))))))))))))))))..)))....))))))))))) ***************GTAATCAATTTCATCCGCTTAATAAA************************************************** T24-m0044-5p 1 ***********************************************************TTTGAGTATGAACATGAGGAAC********** T24-m0044-3p 98 -----------------AATCAATTTCATCCGCTTAA------------------------------------------------------ t1489054 1 ----------------------------------------------------------TTTTGAGTATGAACATGAGGA------------ t0325604 5 ----------------------------------------------------------TTTTGAGTATGAACATGAGGAA----------- t0030939 33 -----------------------------------------------------------TTTGAGTATGAACATGAGGA------------ t0659606 2 -----------------------------------------------------------TTTGAGTATGAACATGAGGAA----------- t0116481 11 -----------------------------------------------------------TTTGAGTATGAACATGAGGAAC---------- t0020818 46 ------------------------------------------------------------TTGAGTATGAACATGAGGAAC---------- t4989070 1 // novel43 T24-m0048 scaffold1257.0:27692:27812:+ 121(nt) -37.42(kcal/mol) CTTAAGCTTTAACAAACTTTCAAAAACAGAGCTTTGGGATGTTGGCGCGTTAAGCCTCTTGAAGACAGGGGTTCGGTCTTGACCACCAATGCGATTAAGCACTGAAGTTCTGGAGCTTGAA T24-m0048 64 .((((((((.................((((((((..(..((((..((((((.(((((((.......))))))).(((....)))...))))))....)))))..)))))))))))))))). *****************************AGCTTTGGGATGTTGGCGCGTT********************************************************************** T24-m0048-5p 51 *****************************************************************************************TGCGATTAAGCACTGAAGTTCT********** T24-m0048-3p 11 --------------------------CAGAGCTTTGGGATGTTGGCGCGT----------------------------------------------------------------------- t0127134 10 ---------------------------AGAGCTTTGGGATGTTGGCGCGT----------------------------------------------------------------------- t0772818 2 ---------------------------AGAGCTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0273261 5 ----------------------------GAGCTTTGGGATGTTGGCGCGT----------------------------------------------------------------------- t0435447 4 -----------------------------AGCTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0797228 2 -----------------------------AGCTTTGGGATGTTGGCGCGTTAA-------------------------------------------------------------------- t4921079 1 ------------------------------GCTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0375985 4 -------------------------------CTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0704276 2 -------------------------------CTTTGGGATGTTGGCGCGTTA--------------------------------------------------------------------- t0423581 4 -------------------------------CTTTGGGATGTTGGCGCGTTAA-------------------------------------------------------------------- t0100189 12 -------------------------------CTTTGGGATGTTGGCGCGTTAAG------------------------------------------------------------------- t0465243 3 -------------------------------CTTTGGGATGTTGGCGCGTTAAGC------------------------------------------------------------------ t0841705 2 ---------------------------------TTGGGATGTTGGCGCGTTAAGCCT---------------------------------------------------------------- t1133468 2 ----------------------------------------------------------------------------------------ATGCGATTAAGCACTGAAGTTC----------- t2379899 1 -----------------------------------------------------------------------------------------TGCGATTAAGCACTGAAGTTC----------- t4313808 1 -----------------------------------------------------------------------------------------TGCGATTAAGCACTGAAGTTCT---------- t0148081 9 // T24-m0424 scaffold719.0:138893:139013:+ 121(nt) -38.12(kcal/mol) CTTAAGCTTTAACAACCTTTCAAAAACAGAGCTTTGGGATGTTGGCGCGTTAAGCCTCTTGAAGACAGGGGTTCGGTCTTGACCACTAATGCGATTAAGCACTGAAGTTCTGGAGCTTGAA T24-m0424 62 .((((((((.................((((((((..(..((((..(((((((.((((((.......))))))..(((....)))..)))))))....)))))..)))))))))))))))). *****************************AGCTTTGGGATGTTGGCGCGTT********************************************************************** T24-m0424-5p 51 *****************************************************************************************TGCGATTAAGCACTGAAGTTCT********** T24-m0424-3p 11 --------------------------CAGAGCTTTGGGATGTTGGCGCGT----------------------------------------------------------------------- t0127134 10 ---------------------------AGAGCTTTGGGATGTTGGCGCGT----------------------------------------------------------------------- t0772818 2 ---------------------------AGAGCTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0273261 5 ----------------------------GAGCTTTGGGATGTTGGCGCGT----------------------------------------------------------------------- t0435447 4 -----------------------------AGCTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0797228 2 -----------------------------AGCTTTGGGATGTTGGCGCGTTAA-------------------------------------------------------------------- t4921079 1 ------------------------------GCTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0375985 4 -------------------------------CTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0704276 2 -------------------------------CTTTGGGATGTTGGCGCGTTA--------------------------------------------------------------------- t0423581 4 -------------------------------CTTTGGGATGTTGGCGCGTTAA-------------------------------------------------------------------- t0100189 12 -------------------------------CTTTGGGATGTTGGCGCGTTAAG------------------------------------------------------------------- t0465243 3 -------------------------------CTTTGGGATGTTGGCGCGTTAAGC------------------------------------------------------------------ t0841705 2 ----------------------------------------------------------------------------------------ATGCGATTAAGCACTGAAGTTC----------- t2379899 1 -----------------------------------------------------------------------------------------TGCGATTAAGCACTGAAGTTC----------- t4313808 1 -----------------------------------------------------------------------------------------TGCGATTAAGCACTGAAGTTCT---------- t0148081 9 // T37-m0057 scaffold1257.0:27692:27812:+ 121(nt) -37.42(kcal/mol) CTTAAGCTTTAACAAACTTTCAAAAACAGAGCTTTGGGATGTTGGCGCGTTAAGCCTCTTGAAGACAGGGGTTCGGTCTTGACCACCAATGCGATTAAGCACTGAAGTTCTGGAGCTTGAA T37-m0057 70 .((((((((.................((((((((..(..((((..((((((.(((((((.......))))))).(((....)))...))))))....)))))..)))))))))))))))). *****************************AGCTTTGGGATGTTGGCGCGTT********************************************************************** T37-m0057-5p 51 *****************************************************************************************TGCGATTAAGCACTGAAGTTCT********** T37-m0057-3p 17 --------------------------CAGAGCTTTGGGATGTTGGCGCGT----------------------------------------------------------------------- t0053277 15 ---------------------------AGAGCTTTGGGATGTTGGCGCGT----------------------------------------------------------------------- t2034889 1 ---------------------------AGAGCTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0105766 8 ----------------------------GAGCTTTGGGATGTTGGCGCGT----------------------------------------------------------------------- t3635306 1 ----------------------------GAGCTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t1622820 1 -----------------------------AGCTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0344609 3 ------------------------------GCTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0751437 2 -------------------------------CTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0480180 2 -------------------------------CTTTGGGATGTTGGCGCGTTA--------------------------------------------------------------------- t0194445 5 -------------------------------CTTTGGGATGTTGGCGCGTTAA-------------------------------------------------------------------- t0072067 11 -------------------------------CTTTGGGATGTTGGCGCGTTAAG------------------------------------------------------------------- t1501227 1 -------------------------------CTTTGGGATGTTGGCGCGTTAAGC------------------------------------------------------------------ t2771473 1 ---------------------------------TTGGGATGTTGGCGCGTTAAGCCT---------------------------------------------------------------- t0659392 2 ----------------------------------------------------------------------------------------ATGCGATTAAGCACTGAAGTTC----------- t0628381 2 -----------------------------------------------------------------------------------------TGCGATTAAGCACTGAAGTTC----------- t0339477 3 -----------------------------------------------------------------------------------------TGCGATTAAGCACTGAAGTTCT---------- t0065448 12 // T37-m0456 scaffold719.0:138893:139013:+ 121(nt) -38.12(kcal/mol) CTTAAGCTTTAACAACCTTTCAAAAACAGAGCTTTGGGATGTTGGCGCGTTAAGCCTCTTGAAGACAGGGGTTCGGTCTTGACCACTAATGCGATTAAGCACTGAAGTTCTGGAGCTTGAA T37-m0456 68 .((((((((.................((((((((..(..((((..(((((((.((((((.......))))))..(((....)))..)))))))....)))))..)))))))))))))))). *****************************AGCTTTGGGATGTTGGCGCGTT********************************************************************** T37-m0456-5p 51 *****************************************************************************************TGCGATTAAGCACTGAAGTTCT********** T37-m0456-3p 17 --------------------------CAGAGCTTTGGGATGTTGGCGCGT----------------------------------------------------------------------- t0053277 15 ---------------------------AGAGCTTTGGGATGTTGGCGCGT----------------------------------------------------------------------- t2034889 1 ---------------------------AGAGCTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0105766 8 ----------------------------GAGCTTTGGGATGTTGGCGCGT----------------------------------------------------------------------- t3635306 1 ----------------------------GAGCTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t1622820 1 -----------------------------AGCTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0344609 3 ------------------------------GCTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0751437 2 -------------------------------CTTTGGGATGTTGGCGCGTT---------------------------------------------------------------------- t0480180 2 -------------------------------CTTTGGGATGTTGGCGCGTTA--------------------------------------------------------------------- t0194445 5 -------------------------------CTTTGGGATGTTGGCGCGTTAA-------------------------------------------------------------------- t0072067 11 -------------------------------CTTTGGGATGTTGGCGCGTTAAG------------------------------------------------------------------- t1501227 1 -------------------------------CTTTGGGATGTTGGCGCGTTAAGC------------------------------------------------------------------ t2771473 1 ----------------------------------------------------------------------------------------ATGCGATTAAGCACTGAAGTTC----------- t0628381 2 -----------------------------------------------------------------------------------------TGCGATTAAGCACTGAAGTTC----------- t0339477 3 -----------------------------------------------------------------------------------------TGCGATTAAGCACTGAAGTTCT---------- t0065448 12 // novel87 T37-m0102 scaffold160.1:102109:102191:- 83(nt) -55.20(kcal/mol) TACACTTAATACATTTGTACCGACTCTCCAATAGAGGTGGGTCCCACCTCTATTGGAGAGGCGGTACAAATGTGGTAAGGATA T37-m0102 357 ....((((.(((((((((((((.(((((((((((((((((...))))))))))))))))).))))))))))))).)))).... ************ATTTGTACCGACTCTCCAATA************************************************** T37-m0102-5p 1 ****************************************************TTGGAGAGGCGGTACAAATGT********** T37-m0102-3p 354 -------AATACATTTGTACCGACTCTCCAA---------------------------------------------------- t1380977 1 --------ATACATTTGTACCGACTCTCC------------------------------------------------------ t2688866 1 ------------ATTTGTACCGACTCTCCAATAGAG----------------------------------------------- t2791831 1 --------------------------------------------------TATTGGAGAGGCGGTACAAATGT---------- t3600618 1 ---------------------------------------------------ATTGGAGAGGCGGTACAAATG----------- t2325995 1 ---------------------------------------------------ATTGGAGAGGCGGTACAAATGT---------- t2038261 1 ---------------------------------------------------ATTGGAGAGGCGGTACAAATGTGG-------- t1601139 1 ----------------------------------------------------TTGGAGAGGCGGTACAAATG----------- t1137703 1 ----------------------------------------------------TTGGAGAGGCGGTACAAATGT---------- t0001430 346 ------------------------------------------------------GGAGAGGCGGTACAAATGTGG-------- t3726342 1 ------------------------------------------------------GGAGAGGCGGTACAAATGTGGT------- t0490570 2 // novel124 T24-m0142 scaffold205.0:141218:141325:- 108(nt) -43.20(kcal/mol) TAAGCAAATCAGTCATAGGGCTCCTCCCCCTTGGCAGGCACTGGTGTATGGTGCAACTACAATCACTTTCATTGACCTGCCAAAGGAGAGTTGCCCTGCGATTGCTTT T24-m0142 45 .(((((.....(((.((((((..(((.((.((((((((((..((((....(((....)))...)))).....)).)))))))).)).)))..)))))).)))))))). *****************************************************************************TGCCAAAGGAGAGTTGCCCTG********** T24-m0142-3p 45 ---------------------------------------------------------------------------CCTGCCAAAGGAGAGTTGCCC------------ t0178898 8 ----------------------------------------------------------------------------CTGCCAAAGGAGAGTTGCCC------------ t0358773 4 -----------------------------------------------------------------------------TGCCAAAGGAGAGTTGCC------------- t3631730 1 -----------------------------------------------------------------------------TGCCAAAGGAGAGTTGCCCTG---------- t0031767 32 // novel124 T24-m0381 scaffold594.0:182727:182834:+ 108(nt) -43.90(kcal/mol) TAAGCAAATCAGTCATAGGGCTCCTCCCTCTTGGCAGGCACTGGTGAATGATGAAACTACAATCACTTTCATTGACCTGCCAAAGGAGAGTTGCCCTGCGATTGCTTT T24-m0381 45 .(((((.....(((.((((((..((((((.((((((((((..(((((.((.........)).))))).....)).))))))))))).)))..)))))).)))))))). *****************************************************************************TGCCAAAGGAGAGTTGCCCTG********** T24-m0381-3p 45 ---------------------------------------------------------------------------CCTGCCAAAGGAGAGTTGCCC------------ t0178898 8 ----------------------------------------------------------------------------CTGCCAAAGGAGAGTTGCCC------------ t0358773 4 -----------------------------------------------------------------------------TGCCAAAGGAGAGTTGCC------------- t3631730 1 -----------------------------------------------------------------------------TGCCAAAGGAGAGTTGCCCTG---------- t0031767 32 // novel124 T37-m0166 scaffold205.0:141218:141325:- 108(nt) -43.20(kcal/mol) TAAGCAAATCAGTCATAGGGCTCCTCCCCCTTGGCAGGCACTGGTGTATGGTGCAACTACAATCACTTTCATTGACCTGCCAAAGGAGAGTTGCCCTGCGATTGCTTT T37-m0166 18 .(((((.....(((.((((((..(((.((.((((((((((..((((....(((....)))...)))).....)).)))))))).)).)))..)))))).)))))))). *****************************************************************************TGCCAAAGGAGAGTTGCCCTG********** T37-m0166-3p 18 ---------------------------------------------------------------------------CCTGCCAAAGGAGAGTTGCCC------------ t0736773 2 ----------------------------------------------------------------------------CTGCCAAAGGAGAGTTGCCC------------ t0354026 3 ----------------------------------------------------------------------------CTGCCAAAGGAGAGTTGCCCTG---------- t3412496 1 -----------------------------------------------------------------------------TGCCAAAGGAGAGTTGCCC------------ t2220087 1 -----------------------------------------------------------------------------TGCCAAAGGAGAGTTGCCCTG---------- t0075152 11 // novel124 T37-m0404 scaffold594.0:182727:182834:+ 108(nt) -43.90(kcal/mol) TAAGCAAATCAGTCATAGGGCTCCTCCCTCTTGGCAGGCACTGGTGAATGATGAAACTACAATCACTTTCATTGACCTGCCAAAGGAGAGTTGCCCTGCGATTGCTTT T37-m0404 18 .(((((.....(((.((((((..((((((.((((((((((..(((((.((.........)).))))).....)).))))))))))).)))..)))))).)))))))). *****************************************************************************TGCCAAAGGAGAGTTGCCCTG********** T37-m0404-3p 18 ---------------------------------------------------------------------------CCTGCCAAAGGAGAGTTGCCC------------ t0736773 2 ----------------------------------------------------------------------------CTGCCAAAGGAGAGTTGCCC------------ t0354026 3 ----------------------------------------------------------------------------CTGCCAAAGGAGAGTTGCCCTG---------- t3412496 1 -----------------------------------------------------------------------------TGCCAAAGGAGAGTTGCCC------------ t2220087 1 -----------------------------------------------------------------------------TGCCAAAGGAGAGTTGCCCTG---------- t0075152 11 // novel125 T24-m0145 scaffold21.0:1998:2194:- 197(nt) -97.30(kcal/mol) GAAGGCATTTTGAAGGGAGAAATGGATGACAACTTTCCTACTTTGTACAAGTTGAAAATCACTCATGAAGAAAAGTTGTCCCTTTAAATCCTATCACTTTTGTGGGGACTAGTAGGGATATCTTTTCTTCACGAGTAACCTTCAACTTGGAAAAAATACAGAAGTTCTCATCCATTTCCTCCTTCAAAATGTCTTCA T24-m0145 30 ((((((((((((((((..(((((((((((.((((((..((.(((...(((((((((....((((.((((((((((.(((((((.....((((..(((....))))))).....))))))).)))))))))).))))....)))))))))...))).))..)))))).)))))))))))..)))))))))))))))). **********TGAAGGGAGAAATGGATGACA********************************************************************************************************************************************************************** T24-m0145-5p 30 -------TTTTGAAGGGAGAAATGGATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0168862 8 --------TTTGAAGGGAGAAATGGATGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0960501 2 --------TTTGAAGGGAGAAATGGATGACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t5074675 1 ---------TTGAAGGGAGAAATGGATGACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1447433 1 ----------TGAAGGGAGAAATGGATGACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0080314 15 ----------TGAAGGGAGAAATGGATGACAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3298941 1 ----------TGAAGGGAGAAATGGATGACAACT------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0842677 2 // novel147 T24-m0173 scaffold246.0:642401:642670:+ 270(nt) -60.80(kcal/mol) TAAGTGTTTCATGTAGAAGTACACGACGTGTCATTAGAAGCACTTTTAGTTGTCAAAAAACATTTTTAACTCTTTCAAAAGTAATCCCAAAAAAGCTCATAAGAAGCACTTCGACAATTGAGGGCGAATCATTTTGCGGGATTGTTTTGCCTATCCAAAGAGTGAGCTTGGACAAACCCCAATCCAACCAGATAGGTAATCACTCGCCGGTTTTTTTCGACTAATGCTAACTGTTAAAAACGATTCGTAGTACGGATATATATATATATA T24-m0173 29 ...((((...(((((...(((((((((((.....(((.((((...(((((((..(((((((..............(((((.(((((((.......((((...(((....)))......)))).(((((....)))))))))))))))))..........((((((..((((.......))))....(((.....)))..))))))....))))))).)))))))))))..)))......)))..)))).))))...)))))..))))... **********ATGTAGAAGTACACGACGTGTCA********************************************************************************************************************************************************************************************************************************************* T24-m0173-5p 28 ------TTTCATGTAGAAGTACACGACGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t4037470 1 --------TCATGTAGAAGTACACGACGTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0539311 3 ---------CATGTAGAAGTACACGACGTGTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t4064000 1 ----------ATGTAGAAGTACACGACGTGTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0061253 19 ----------ATGTAGAAGTACACGACGTGTCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0294241 5 // novel147 T37-m0190 scaffold246.0:642401:642670:+ 270(nt) -60.80(kcal/mol) TAAGTGTTTCATGTAGAAGTACACGACGTGTCATTAGAAGCACTTTTAGTTGTCAAAAAACATTTTTAACTCTTTCAAAAGTAATCCCAAAAAAGCTCATAAGAAGCACTTCGACAATTGAGGGCGAATCATTTTGCGGGATTGTTTTGCCTATCCAAAGAGTGAGCTTGGACAAACCCCAATCCAACCAGATAGGTAATCACTCGCCGGTTTTTTTCGACTAATGCTAACTGTTAAAAACGATTCGTAGTACGGATATATATATATATA T37-m0190 12 ...((((...(((((...(((((((((((.....(((.((((...(((((((..(((((((..............(((((.(((((((.......((((...(((....)))......)))).(((((....)))))))))))))))))..........((((((..((((.......))))....(((.....)))..))))))....))))))).)))))))))))..)))......)))..)))).))))...)))))..))))... **********ATGTAGAAGTACACGACGTGTCA********************************************************************************************************************************************************************************************************************************************* T37-m0190-5p 12 --------TCATGTAGAAGTACACGACGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2135704 1 --------TCATGTAGAAGTACACGACGTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0775446 2 --------TCATGTAGAAGTACACGACGTGTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t2807523 1 ---------CATGTAGAAGTACACGACGTGTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t1809134 1 ----------ATGTAGAAGTACACGACGTGTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0146684 6 -----------TGTAGAAGTACACGACGTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1087020 1 novel166 T24-m0202 scaffold277.0:310417:310601:- 185(nt) -45.80(kcal/mol) ACACCAAGGATGGATTCCTCAACTGCATATGCATTCCAAACTTTGACAAGAGAGATGGTTGACATGAAGATGATGTAGCTGATAGAAATTAGGTAGTTCACTAATGCGAAAATAGTTAAGCACACAAATTAACCCTCTTGTTGTCAAATTGTAGTAAGGATGCAAGTAGGGATCATTCTAGACCG T24-m0202 39 ......((((((.((((((..(((((((....(((.(((..((((((((..((((.((((((..((.((.(((..((.(((((....))))).))..)))))..(((............)))..))..)))))).)))).))))))))))).)))....)))).)))))))))))))))...... ********************************************************************************************************************************************************AGTAAGGATGCAAGTAGGGATCA********** T24-m0202-3p 39 ------------------------------------------------------------------------------------------------------------------------------------------------------GTAGTAAGGATGCAAGTAGGGATCA---------- t0329669 4 --------------------------------------------------------------------------------------------------------------------------------------------------------AGTAAGGATGCAAGTAGGGATCA---------- t0041114 26 --------------------------------------------------------------------------------------------------------------------------------------------------------AGTAAGGATGCAAGTAGGGATCAT--------- t0451856 3 ----------------------------------------------------------------------------------------------------------------------------------------------------------TAAGGATGCAAGTAGGGATCA---------- t0568049 3 ----------------------------------------------------------------------------------------------------------------------------------------------------------TAAGGATGCAAGTAGGGATCAT--------- t3814027 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------AAGGATGCAAGTAGGGATCA---------- t3723079 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------AAGGATGCAAGTAGGGATCAT--------- t4048124 1 // novel168 T24-m0204 scaffold278.0:159408:159668:+ 261(nt) -133.40(kcal/mol) TTGGATAAGATAAATCACTAGACTCGAGGCATGGTGGAGTAAATGGATGTCTAACTTCTGAATTTGGTCAAGGTTGAAGGTAGAAGATGAGTAATCATGAAGGTAAATTGTCCCTCCTAATCCCCATTGAAAATGGTAGGATTAGGACCGATAAATTTAATGAATACTCCGTCTTCTACCTTCAACTTGGACGAATTTTGGAAGTTTGTCATCCATTTATTCCATTAGTATGCCTGAATCTAGTGAATTGTCCCATCCAAG T24-m0204 87 ((((((..(((((.((((((((.((.(((((((((((((((((((((((.(.((((((..((.((.(((.(((((((((((((((((((((((.((((..((((...(((((..(((((((((((((.....))))..)))))))))..))))))))).)))).)))).))))))))))))))))))).))).)).))..)))))).).))))))))))))))))...))))))))).)))))))).)))))..)))))). **********TAAATCACTAGACTCGAGGCAT************************************************************************************************************************************************************************************************************************************* T24-m0204-5p 85 ----------TAAATCACTAGACTCGAGGCAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------TTGAAGGTAGAAGATGAGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------AAGGTAGAAGATGAGTAATCATGA----------------------------------------------------------------------------------------------------------------------------------------------------------- // novel177 T24-m0216 scaffold290.0:481870:481968:+ 99(nt) -23.20(kcal/mol) GGTGATTGTATTACATTACAATCATCATTAGTGTCATTGGCTTGCAGAACATCTTCCAGCTCTATGTATCCTGATGATAGGAGTGTAAAGGAATTGTTA T24-m0216 119 ((..(((.(.(((((((.(.(((((((...(((.(((.((((.(.((.....)).).))))..))))))..))))))).).))))))).).)))..)). **********TTACATTACAATCATCATTAG******************************************************************** T24-m0216-5p 118 --------TATTACATTACAATCATCATT---------------------------------------------------------------------- t3158729 1 --------TATTACATTACAATCATCATTA--------------------------------------------------------------------- t2526081 1 ---------ATTACATTACAATCATCATTA--------------------------------------------------------------------- t5326654 1 ---------ATTACATTACAATCATCATTAG-------------------------------------------------------------------- t4658477 1 ----------TTACATTACAATCATCATTA--------------------------------------------------------------------- t0836600 2 ----------TTACATTACAATCATCATTAG-------------------------------------------------------------------- t0007554 102 ----------TTACATTACAATCATCATTAGT------------------------------------------------------------------- t0219392 6 -----------TACATTACAATCATCATTAGT------------------------------------------------------------------- t0416364 4 -------------------------------TGTCATTGGCTTGCAGAACAT----------------------------------------------- t5210794 1 // novel188 T24-m0228 scaffold3.0:1985646:1985793:+ 148(nt) -63.70(kcal/mol) GGGTAAAGGACGGTGACAGAAGAGAGTGAGCACACATGGTATTTTCTTGCATGCTGGGTTCATGCTTGAAGCTTTGTGTGCTTACTCTCTATCTGTCACCCACCTCTCTCTCTCTCTCTGAATCATGTTTGTTTTGTATATTTGCCCG T24-m0228 43 (((((((((..(((((((((((((((((((((((((.(((...(((..(((((.......)))))..)))))).)))))))))))))))).)))))))))..))........((.....))...................))))))). **********CGGTGACAGAAGAGAGTGAGC********************************************************************************************************************* T24-m0228-5p 42 ----------CGGTGACAGAAGAGAGTGAGC--------------------------------------------------------------------------------------------------------------------- t0030606 33 ----------CGGTGACAGAAGAGAGTGAGCAC------------------------------------------------------------------------------------------------------------------- t0694124 2 ------------GTGACAGAAGAGAGTGAGCAC------------------------------------------------------------------------------------------------------------------- t0202898 7 ------------------GAAGAGAGTGAGCACACATGGTAT---------------------------------------------------------------------------------------------------------- t2922835 1 // novel19 T24-m0019 scaffold1049.0:16097:16179:- 83(nt) -50.50(kcal/mol) GGGTTCTGTAGGAGTGACCTGAGATCACATATGGCGTTATGTGTTGCGCTTGATGTGTTCTCAGGTCGCCCCTGCGGCACCTT T24-m0019 216 ((((.(((((((.(((((((((((.(((((..(((((........)))))..))))).))))))))))).))))))).)))). **********GGAGTGACCTGAGATCACATA**************************************************** T24-m0019-5p 214 ---------AGGAGTGACCTGAGATCACA------------------------------------------------------ t2189706 1 ----------GGAGTGACCTGAGATCACAT----------------------------------------------------- t0922811 2 ----------GGAGTGACCTGAGATCACATA---------------------------------------------------- t0003295 192 ----------GGAGTGACCTGAGATCACATAT--------------------------------------------------- t1209885 2 ----------GGAGTGACCTGAGATCACATATG-------------------------------------------------- t0207750 7 ----------GGAGTGACCTGAGATCACATATGG------------------------------------------------- t0238515 6 ----------GGAGTGACCTGAGATCACATATGGC------------------------------------------------ t5366789 1 ------------AGTGACCTGAGATCACATATGGCG----------------------------------------------- t0552803 3 ----------------ACCTGAGATCACATATGGCGTT--------------------------------------------- t3691205 1 -----------------CCTGAGATCACATATGGCGT---------------------------------------------- t3334478 1 // T37-m0021 scaffold1049.0:16097:16179:- 83(nt) -50.50(kcal/mol) GGGTTCTGTAGGAGTGACCTGAGATCACATATGGCGTTATGTGTTGCGCTTGATGTGTTCTCAGGTCGCCCCTGCGGCACCTT T37-m0021 615 ((((.(((((((.(((((((((((.(((((..(((((........)))))..))))).))))))))))).))))))).)))). **********GGAGTGACCTGAGATCACATA**************************************************** T37-m0021-5p 611 ---------AGGAGTGACCTGAGATCACATA---------------------------------------------------- t2349655 1 ----------GGAGTGACCTGAGATCAC------------------------------------------------------- t0722080 2 ----------GGAGTGACCTGAGATCACA------------------------------------------------------ t2189757 1 ----------GGAGTGACCTGAGATCACAT----------------------------------------------------- t3638739 1 ----------GGAGTGACCTGAGATCACATA---------------------------------------------------- t0000895 513 ----------GGAGTGACCTGAGATCACATAT--------------------------------------------------- t0077806 11 ----------GGAGTGACCTGAGATCACATATG-------------------------------------------------- t0028340 26 ----------GGAGTGACCTGAGATCACATATGG------------------------------------------------- t0041700 18 ----------GGAGTGACCTGAGATCACATATGGC------------------------------------------------ t0784635 2 ------------AGTGACCTGAGATCACATATGGC------------------------------------------------ t2963413 1 ------------AGTGACCTGAGATCACATATGGCG----------------------------------------------- t0019974 35 ----------------ACCTGAGATCACATATGGCGTTAT------------------------------------------- t3473278 1 -------------------TGAGATCACATATGGCGTTAT------------------------------------------- t0911803 1 ---------------------AGATCACATATGGCGTTATGTGT--------------------------------------- t2962588 1 ------------------------------ATGGCGTTATGTGTTGCGCT--------------------------------- t0982798 1 // novel190 T24-m0230 scaffold31.0:276763:276886:+ 124(nt) -44.59(kcal/mol) AGTGTGCCAGTAACACAGACTGATACACTAAATGTTATAATACGAATGGTTGAATACTCAGAATTTTTTTTTTAATTACTTGTATTATGATACTTAGTGTATCGAATCGTGTTCACGGCATAAT T24-m0230 46 ..((((((.(((((((.((.(((((((((((.(((((((((((((.((((((((................)))))))).))))))))))))).)))))))))))..))))))).)))))))).. **********TAACACAGACTGATACACTAAAT******************************************************************************************* T24-m0230-5p 45 -------CAGTAACACAGACTGATACACTAA--------------------------------------------------------------------------------------------- t4718789 1 --------AGTAACACAGACTGATACACTAAA-------------------------------------------------------------------------------------------- t2507381 1 ---------GTAACACAGACTGATACACTAAAT------------------------------------------------------------------------------------------- t0106089 12 ----------TAACACAGACTGATACACTAAAT------------------------------------------------------------------------------------------- t0036609 29 -----------AACACAGACTGATACACTAAATG------------------------------------------------------------------------------------------ t2035924 1 -----------AACACAGACTGATACACTAAATGT----------------------------------------------------------------------------------------- t1459084 1 --------------ACAGACTGATACACTAAATGTTAT-------------------------------------------------------------------------------------- t5078594 1 // novel190 T24-m0461 scaffold873.0:143667:143790:+ 124(nt) -43.69(kcal/mol) AGTGTGCCAGTAACACAGACTGATACACTAAATGTTATAATATGAATGGTTGAATACTTAGAATTTTTTTTTTAATTGCTTGTATTATGACACTTAGTGTATCGAATCGTGTTCACGGCATAAT T24-m0461 46 ..((((((.(((((((.((.(((((((((((.((((((((((..(..(((((((................)))))))..)..)))))))))).)))))))))))..))))))).)))))))).. **********TAACACAGACTGATACACTAAAT******************************************************************************************* T24-m0461-5p 45 -------CAGTAACACAGACTGATACACTAA--------------------------------------------------------------------------------------------- t4718789 1 --------AGTAACACAGACTGATACACTAAA-------------------------------------------------------------------------------------------- t2507381 1 ---------GTAACACAGACTGATACACTAAAT------------------------------------------------------------------------------------------- t0106089 12 ----------TAACACAGACTGATACACTAAAT------------------------------------------------------------------------------------------- t0036609 29 -----------AACACAGACTGATACACTAAATG------------------------------------------------------------------------------------------ t2035924 1 -----------AACACAGACTGATACACTAAATGT----------------------------------------------------------------------------------------- t1459084 1 --------------ACAGACTGATACACTAAATGTTAT-------------------------------------------------------------------------------------- t5078594 1 // novel190 T24-m0462 scaffold873.0:14371:14494:- 124(nt) -43.69(kcal/mol) AGTGTGCCAGTAACACAGACTGATACACTAAATGTTATAATATGAATGGTTGAATACTTAGAATTTTTTTTTTAATTGCTTGTATTATGACACTTAGTGTATCGAATCGTGTTCACGGCATAAT T24-m0462 46 ..((((((.(((((((.((.(((((((((((.((((((((((..(..(((((((................)))))))..)..)))))))))).)))))))))))..))))))).)))))))).. **********TAACACAGACTGATACACTAAAT******************************************************************************************* T24-m0462-5p 45 -------CAGTAACACAGACTGATACACTAA--------------------------------------------------------------------------------------------- t4718789 1 --------AGTAACACAGACTGATACACTAAA-------------------------------------------------------------------------------------------- t2507381 1 ---------GTAACACAGACTGATACACTAAAT------------------------------------------------------------------------------------------- t0106089 12 ----------TAACACAGACTGATACACTAAAT------------------------------------------------------------------------------------------- t0036609 29 -----------AACACAGACTGATACACTAAATG------------------------------------------------------------------------------------------ t2035924 1 -----------AACACAGACTGATACACTAAATGT----------------------------------------------------------------------------------------- t1459084 1 --------------ACAGACTGATACACTAAATGTTAT-------------------------------------------------------------------------------------- t5078594 1 // novel202 T24-m0245 scaffold338.0:60544:60620:- 77(nt) -19.80(kcal/mol) TCTTGAGAGATTTTATTCTTTAGGTTTATTTCTTTAAGAGAATTGTCTGACTTAAGAGAATGGAAGAATTCTCGATA T24-m0245 32 ..(((((((.((((((((((((((((...(((((...)))))......))))).)))))))))))...))))))).. *********************************************TCTGACTTAAGAGAATGGAAGA********** T24-m0245-3p 31 ---------------------------ATTTCTTTAAGAGAATTGTCTGAC-------------------------- t3134199 1 -------------------------------------------TGTCTGACTTAAGAGAATGGAA------------ t3227582 1 ---------------------------------------------TCTGACTTAAGAGAATGGAA------------ t5492484 1 ---------------------------------------------TCTGACTTAAGAGAATGGAAG----------- t0907958 2 ---------------------------------------------TCTGACTTAAGAGAATGGAAGA---------- t0124693 10 ---------------------------------------------TCTGACTTAAGAGAATGGAAGAA--------- t3593485 1 ---------------------------------------------TCTGACTTAAGAGAATGGAAGAAT-------- t0364001 4 ----------------------------------------------CTGACTTAAGAGAATGGAAGA---------- t2677037 1 ----------------------------------------------CTGACTTAAGAGAATGGAAGAA--------- t0529053 3 -----------------------------------------------TGACTTAAGAGAATGGAAGAA--------- t0306141 5 -----------------------------------------------TGACTTAAGAGAATGGAAGAAT-------- t0525221 3 // novel203 T24-m0246 scaffold34.0:1259907:1260059:+ 153(nt) -45.50(kcal/mol) AAGCTCCTCTTTCCTCTTCTCCTTTCTTGCGGCAGAGATGGTCTATGGAATTTCTGGAGGTTTTTCTGATTTGGGAATGGATTTAGGGAAGTTGGGTGGTACAGCAAGGGTGTGTGGAGGTGTGGAATGGAAGGAGAATGGATGGTGGTGCTG T24-m0246 145 .(((.((.((.(((..((((((((((...(.(((......((((((..(((((((..((((((((((......)))).))))))..)))))))..)))).)).(((......))).....))).)...)))))))))).))).)).)).))). ************************************************************************************************************************TGTGGAATGGAAGGAGAATGGAT********** T24-m0246-3p 139 ---------------------------------------------------------------------------------------------------------------GTGTGGAGGTGTGGAATGGAAGGA------------------ t4977727 1 -----------------------------------------------------------------------------------------------------------------GTGGAGGTGTGGAATGGAAGGAG----------------- t1118084 2 ---------------------------------------------------------------------------------------------------------------------AGGTGTGGAATGGAAGGAGAATGG------------ t1816968 1 -----------------------------------------------------------------------------------------------------------------------GTGTGGAATGGAAGGAGAATGGA----------- t3210679 1 -----------------------------------------------------------------------------------------------------------------------GTGTGGAATGGAAGGAGAATGGAT---------- t1143166 2 ------------------------------------------------------------------------------------------------------------------------TGTGGAATGGAAGGAGAATGG------------ t0126248 10 ------------------------------------------------------------------------------------------------------------------------TGTGGAATGGAAGGAGAATGGA----------- t0102490 12 ------------------------------------------------------------------------------------------------------------------------TGTGGAATGGAAGGAGAATGGAT---------- t0011486 73 ------------------------------------------------------------------------------------------------------------------------TGTGGAATGGAAGGAGAATGGATG--------- t0217680 6 -------------------------------------------------------------------------------------------------------------------------GTGGAATGGAAGGAGAATGGAT---------- t0210711 7 -------------------------------------------------------------------------------------------------------------------------GTGGAATGGAAGGAGAATGGATG--------- t0328094 5 --------------------------------------------------------------------------------------------------------------------------TGGAATGGAAGGAGAATGGA----------- t5476575 1 --------------------------------------------------------------------------------------------------------------------------TGGAATGGAAGGAGAATGGAT---------- t0154922 9 --------------------------------------------------------------------------------------------------------------------------TGGAATGGAAGGAGAATGGATG--------- t0144308 9 --------------------------------------------------------------------------------------------------------------------------TGGAATGGAAGGAGAATGGATGGT------- t2132900 1 ---------------------------------------------------------------------------------------------------------------------------GGAATGGAAGGAGAATGGAT---------- t3268911 1 ---------------------------------------------------------------------------------------------------------------------------GGAATGGAAGGAGAATGGATGGTG------ t5312565 1 ----------------------------------------------------------------------------------------------------------------------------GAATGGAAGGAGAATGGAT---------- t1070305 2 ------------------------------------------------------------------------------------------------------------------------------ATGGAAGGAGAATGGATGGTGGTG--- t1968433 1 // novel203 T24-m0247 scaffold34.0:1294778:1294930:+ 153(nt) -45.50(kcal/mol) AAGCTCCTCTTTCCTCTTCTCCTTTCTTGCGGCAGAGATGGTCTATGGAATTTCTGGAGGTTTTTCTGATTTGGGAATGGATTTAGGGAAGTTGGGTGGTACAGCAAGGGTGTGTGGAGGTGTGGAATGGAAGGAGAATGGATGGTGGTGCTG T24-m0247 145 .(((.((.((.(((..((((((((((...(.(((......((((((..(((((((..((((((((((......)))).))))))..)))))))..)))).)).(((......))).....))).)...)))))))))).))).)).)).))). ************************************************************************************************************************TGTGGAATGGAAGGAGAATGGAT********** T24-m0247-3p 139 ---------------------------------------------------------------------------------------------------------------GTGTGGAGGTGTGGAATGGAAGGA------------------ t4977727 1 -----------------------------------------------------------------------------------------------------------------GTGGAGGTGTGGAATGGAAGGAG----------------- t1118084 2 ---------------------------------------------------------------------------------------------------------------------AGGTGTGGAATGGAAGGAGAATGG------------ t1816968 1 -----------------------------------------------------------------------------------------------------------------------GTGTGGAATGGAAGGAGAATGGA----------- t3210679 1 -----------------------------------------------------------------------------------------------------------------------GTGTGGAATGGAAGGAGAATGGAT---------- t1143166 2 ------------------------------------------------------------------------------------------------------------------------TGTGGAATGGAAGGAGAATGG------------ t0126248 10 ------------------------------------------------------------------------------------------------------------------------TGTGGAATGGAAGGAGAATGGA----------- t0102490 12 ------------------------------------------------------------------------------------------------------------------------TGTGGAATGGAAGGAGAATGGAT---------- t0011486 73 ------------------------------------------------------------------------------------------------------------------------TGTGGAATGGAAGGAGAATGGATG--------- t0217680 6 -------------------------------------------------------------------------------------------------------------------------GTGGAATGGAAGGAGAATGGAT---------- t0210711 7 -------------------------------------------------------------------------------------------------------------------------GTGGAATGGAAGGAGAATGGATG--------- t0328094 5 --------------------------------------------------------------------------------------------------------------------------TGGAATGGAAGGAGAATGGA----------- t5476575 1 --------------------------------------------------------------------------------------------------------------------------TGGAATGGAAGGAGAATGGAT---------- t0154922 9 --------------------------------------------------------------------------------------------------------------------------TGGAATGGAAGGAGAATGGATG--------- t0144308 9 --------------------------------------------------------------------------------------------------------------------------TGGAATGGAAGGAGAATGGATGGT------- t2132900 1 ---------------------------------------------------------------------------------------------------------------------------GGAATGGAAGGAGAATGGAT---------- t3268911 1 ---------------------------------------------------------------------------------------------------------------------------GGAATGGAAGGAGAATGGATGGTG------ t5312565 1 ----------------------------------------------------------------------------------------------------------------------------GAATGGAAGGAGAATGGAT---------- t1070305 2 ------------------------------------------------------------------------------------------------------------------------------ATGGAAGGAGAATGGATGGTGGTG--- t1968433 1 // novel228 T24-m0279 scaffold4.0:564785:564928:- 144(nt) -53.20(kcal/mol) ATATAAAATTTGAGAATTGTTATTGGCACTCCAAAAATCTTATTTTGCACTCCAAACTTACTATAATTAGAAACAAAAATACAATTGTGAGGAGTATAGAATGAGATTTTTGTAGTGCTAATAACAATTCCCTAAACTTTATTC T24-m0279 11 ..(((((.((((.(((((((((((((((((.((((((((((((((((.(((((.......(((....)))..((((........))))..))))).)))))))))))))))).)))))))))))))))))..)))).))))).. **********TGAGAATTGTTATTGGCACTCCA*************************************************************************************************************** T24-m0279-5p 11 ----------TGAGAATTGTTATTGGCACTCCA--------------------------------------------------------------------------------------------------------------- t0314647 5 ----------TGAGAATTGTTATTGGCACTCCAA-------------------------------------------------------------------------------------------------------------- t1262692 1 -----------GAGAATTGTTATTGGCACTCC---------------------------------------------------------------------------------------------------------------- t0970821 2 -----------GAGAATTGTTATTGGCACTCCA--------------------------------------------------------------------------------------------------------------- t4930166 1 -----------GAGAATTGTTATTGGCACTCCAAA------------------------------------------------------------------------------------------------------------- t5028882 1 ------------AGAATTGTTATTGGCACTCCAAAA------------------------------------------------------------------------------------------------------------ t4535616 1 // novel228 T37-m0052 scaffold124.0:713453:713609:+ 157(nt) -31.02(kcal/mol) ATATGGAACAAATCAACAGTGTGAGTACCAAGTAACATTTTCATGATGAACTACATTTGGACGATTAAATGATTTCTGATTCAAATTATTGTTATAAGAATGATCTTAAAATAAAGATTGAGAATGAGAATTGTTATTGGCACTCCAAATTCCTCAT T37-m0052 26 ....((((...........((.((((.((((.((((((((((((.........(((((.((((((....(((........)))....))))))....))))).((((((........))))))))))))).))))))))).))))))..)))).... ****************************************************************************************************************************TGAGAATTGTTATTGGCACTCCA********** T37-m0052-3p 25 --------------AACAGTGTGAGTACCAAGTAACAT----------------------------------------------------------------------------------------------------------------------- t2423235 1 ---------------------------------------------------------------------------------------------------------------------------ATGAGAATTGTTATTGGCACTCCA---------- t0321333 3 ----------------------------------------------------------------------------------------------------------------------------TGAGAATTGTTATTGGCACTCCA---------- t0057395 14 ----------------------------------------------------------------------------------------------------------------------------TGAGAATTGTTATTGGCACTCCAA--------- t0208466 4 -----------------------------------------------------------------------------------------------------------------------------GAGAATTGTTATTGGCACTCCA---------- t3089023 1 -----------------------------------------------------------------------------------------------------------------------------GAGAATTGTTATTGGCACTCCAAA-------- t0722132 2 ------------------------------------------------------------------------------------------------------------------------------AGAATTGTTATTGGCACTCCAAAT------- t3862278 1 // novel228 T37-m0316 scaffold4.0:564785:564928:- 144(nt) -53.20(kcal/mol) ATATAAAATTTGAGAATTGTTATTGGCACTCCAAAAATCTTATTTTGCACTCCAAACTTACTATAATTAGAAACAAAAATACAATTGTGAGGAGTATAGAATGAGATTTTTGTAGTGCTAATAACAATTCCCTAAACTTTATTC T37-m0316 22 ..(((((.((((.(((((((((((((((((.((((((((((((((((.(((((.......(((....)))..((((........))))..))))).)))))))))))))))).)))))))))))))))))..)))).))))).. **********TGAGAATTGTTATTGGCACTCCA*************************************************************************************************************** T37-m0316-5p 22 ----------TGAGAATTGTTATTGGCACTCCA--------------------------------------------------------------------------------------------------------------- t0057395 14 ----------TGAGAATTGTTATTGGCACTCCAA-------------------------------------------------------------------------------------------------------------- t0208466 4 -----------GAGAATTGTTATTGGCACTCCA--------------------------------------------------------------------------------------------------------------- t3089023 1 -----------GAGAATTGTTATTGGCACTCCAAA------------------------------------------------------------------------------------------------------------- t0722132 2 ------------AGAATTGTTATTGGCACTCCAAAA------------------------------------------------------------------------------------------------------------ t2507239 1 // novel233 T24-m0286 scaffold41.0:691160:691236:- 77(nt) -25.20(kcal/mol) AGGAAGAGAAGAGTGCCTAAACGTTCATACAATTCAAGCTTTGAGTTGTTGGAATGTTTAGGTGTAATATGAATTGA T24-m0286 12 ............(..(((((((((((..((((((((.....))))))))..)))))))))))..)............ *********************************************TTGTTGGAATGTTTAGGTGTAA********** T24-m0286-3p 12 -------------------------------------------AGTTGTTGGAATGTTTAGGTGTA----------- t0463722 3 ---------------------------------------------TTGTTGGAATGTTTAGGTGTA----------- t1204296 2 ---------------------------------------------TTGTTGGAATGTTTAGGTGTAA---------- t0222785 6 ----------------------------------------------TGTTGGAATGTTTAGGTGTAA---------- t2677169 1 // novel233 T37-m0323 scaffold41.0:691160:691236:- 77(nt) -25.20(kcal/mol) AGGAAGAGAAGAGTGCCTAAACGTTCATACAATTCAAGCTTTGAGTTGTTGGAATGTTTAGGTGTAATATGAATTGA T37-m0323 22 ............(..(((((((((((..((((((((.....))))))))..)))))))))))..)............ *********************************************TTGTTGGAATGTTTAGGTGTAA********** T37-m0323-3p 22 ------------------------------------------GAGTTGTTGGAATGTTTAGGTGTA----------- t3967724 1 -------------------------------------------AGTTGTTGGAATGTTTAGGTGTA----------- t1456659 1 ---------------------------------------------TTGTTGGAATGTTTAGGTGTA----------- t0133029 7 ---------------------------------------------TTGTTGGAATGTTTAGGTGTAA---------- t0067029 12 ---------------------------------------------TTGTTGGAATGTTTAGGTGTAAT--------- t3673893 1 // novel246 T24-m0303 scaffold432.0:23508:23638:+ 131(nt) -43.71(kcal/mol) CCTTGTTTGGTAGCCGAGGATGATTTGCCTGCAGCCTCGATCCTAAAGAGTAAAGAGGTTTATTACACGATAAAAATCAGAAAAACCCTAGTTGAGTTCTCAGGTAGTCACTCCTTGGCGACTTGACAAGC T24-m0303 31 .((((((.(((.(((((((((((((.(((((.((.((((((.............((..((((((....))))))..))............))))))..)))))))))))).)))))))).))).)))))). **********TAGCCGAGGATGATTTGCCTGC*************************************************************************************************** T24-m0303-5p 31 ----------TAGCCGAGGATGATTTGCCTGC--------------------------------------------------------------------------------------------------- t0033849 31 // novel246 T37-m0337 scaffold432.0:23508:23638:+ 131(nt) -43.71(kcal/mol) CCTTGTTTGGTAGCCGAGGATGATTTGCCTGCAGCCTCGATCCTAAAGAGTAAAGAGGTTTATTACACGATAAAAATCAGAAAAACCCTAGTTGAGTTCTCAGGTAGTCACTCCTTGGCGACTTGACAAGC T37-m0337 5 .((((((.(((.(((((((((((((.(((((.((.((((((.............((..((((((....))))))..))............))))))..)))))))))))).)))))))).))).)))))). **********TAGCCGAGGATGATTTGCCTGC*************************************************************************************************** T37-m0337-5p 5 ----------TAGCCGAGGATGATTTGCCTGC--------------------------------------------------------------------------------------------------- t0197335 5 // novel247 T24-m0304 scaffold432.0:144980:145237:+ 258(nt) -122.30(kcal/mol) GTCAACGCATTTTGAATTCTTCTAGAGTGTCCCTAGAAGACGTGTACATGCGAGAATTAAATGTTTTTTTTATCAAAAGAACTATAAAAAAAGATGTGTGAATTGTTCTAGGCGATGATTGTACAAAGGATCCACGTACACTTATCGCCTAGGACGTGTGAATTCACACGTCCCGTTTAAGAATTATTTCAATAAAACACTTAATTCTCGCTTGTACATGTCTTCTAGGACATTCTAGAAGAATTTGAAACACATTGA T24-m0304 29 .((((.(..(((..((((((((((((((((((.(((((((((((((((.(((((((((((.((((((.................((((....((((((((((((((((((((((((((.(((((...(....)..))))).)))))))))))))).....))))))))))))...)))).(((....)))...)))))).))))))))))).)))))))))))))))))))))))))))))))))..)))..).)))) *********************************************************************************************************************************************************************************************************************************TAGGACATTCTAGAAGAATTTGA********** T24-m0304-3p 29 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGACATTCTAGAAGAATTTGA------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGACATTCTAGAAGAATTTGAA------ ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGACATTCTAGAAGAATTTGA------- // novel250 T24-m0308 scaffold44.2:437600:437739:- 140(nt) -57.40(kcal/mol) AGAGCCGTGTTTGGTAGCCAAGGATGACTTGCCTAATTAGATATCATATATTCCCCAAGTTACTAACAGATTAGTACTTGGGCACATATATATTAGGGTTTCCAGCTAGGCAGTTGTCCTTCGGCTAATCTGACTGGCTC T24-m0308 11 .((((((.(((.((((((((((((..(((.(((((.((.((.(((((((((..(((((((.(((((....)))))))))))).....))))))...))).)).)).))))))))..))))).)))).))).))))))))) ************************************************************************************************************GGCAGTTGTCCTTCGGCTAATC********** T24-m0308-3p 11 -----------------------------------------------------------------------------------------------------------AGGCAGTTGTCCTTCGGCTAATC---------- t5334304 1 ------------------------------------------------------------------------------------------------------------GGCAGTTGTCCTTCGGCTAAT----------- t4204473 1 ------------------------------------------------------------------------------------------------------------GGCAGTTGTCCTTCGGCTAATC---------- t0149346 9 // novel250 T37-m0342 scaffold44.2:437600:437739:- 140(nt) -57.40(kcal/mol) AGAGCCGTGTTTGGTAGCCAAGGATGACTTGCCTAATTAGATATCATATATTCCCCAAGTTACTAACAGATTAGTACTTGGGCACATATATATTAGGGTTTCCAGCTAGGCAGTTGTCCTTCGGCTAATCTGACTGGCTC T37-m0342 24 .((((((.(((.((((((((((((..(((.(((((.((.((.(((((((((..(((((((.(((((....)))))))))))).....))))))...))).)).)).))))))))..))))).)))).))).))))))))) ************************************************************************************************************GGCAGTTGTCCTTCGGCTAATC********** T37-m0342-3p 23 ---------------------------------------------------------------TAACAGATTAGTACTTGGGCA-------------------------------------------------------- t1344927 1 ------------------------------------------------------------------------------------------------------------GGCAGTTGTCCTTCGGCTAAT----------- t0332267 3 ------------------------------------------------------------------------------------------------------------GGCAGTTGTCCTTCGGCTAATC---------- t0037515 20 // novel26 T24-m0026 scaffold112.0:249158:249438:- 281(nt) -56.85(kcal/mol) TTAGTCAGAAAATTGACGTTAAATTGTGAGGTAATAGACTCTCTTAAAAGTGAGACTATCCATCGACTCTCATCATCTTATGTTTTTTGCATAATATTTGCACGAGAATTCATGTTAAACTGTGAGGTAAAAAACTATTACATTACTTTTGTTGTTGTCCTTAAATTTGTTGAGCAACACGACACGAGCATGTGATATGAGAATGAGTAGTGTTATATATTTTTCATTTTTCGGTTGATTTTATACATTTTATTCAATTTAATAGTCAAAAATTAAAAAAA T24-m0026 25 ............((((((((((((((((((((.(((((.((.((.((((((((((..........((((((((..(((((.(((((((((...(((((((.(((.(....).))))))).)))...))))))))).(((((((..(((.((((((.((.(((((.....)))))..)))))))).))).))))))).)))))))))).)))..........)))))))))).))..)).)))))..))))))..))))))))).)))))............ **********AATTGACGTTAAATTGTGAGGTA******************************************************************************************************************************************************************************************************************************************************** T24-m0026-5p 24 ---------AAATTGACGTTAAATTGTGAGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------AATTGACGTTAAATTGTGAGGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------AATTGACGTTAAATTGTGAGGTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------------------------------------------------------------------------------------------TATTTGCACGAGAATTCATGTTA------------------------------------------------------------------------------------------------------------------------------------------ novel266 T24-m0331 scaffold489.0:159566:159675:- 110(nt) -59.00(kcal/mol) TCGTGTTTGCGTTCTGTTTTAGTGTATCCATTATTCTTCTGCGTTCCCATTCTCAAGGATGATGGGAACTTAGAAGAACAATGGATCCACTAAAACAGCACATAAACACG T24-m0331 333 .((((((((.((.(((((((((((.(((((((.((((((((.(((((((((.((...)).))))))))).)))))))).))))))).))))))))))).)).)))))))) *****************************************************************************ACAATGGATCCACTAAAACAGCA********** T24-m0331-3p 327 -----TTTGCGTTCTGTTTTAGTGTA------------------------------------------------------------------------------------ t0250240 6 -----------------------------------------------------------------------------ACAATGGATCCACTAAAAC-------------- t0505749 3 -----------------------------------------------------------------------------ACAATGGATCCACTAAAACAG------------ t0008105 96 -----------------------------------------------------------------------------ACAATGGATCCACTAAAACAGC----------- t0162283 8 -----------------------------------------------------------------------------ACAATGGATCCACTAAAACAGCA---------- t0002936 209 -----------------------------------------------------------------------------ACAATGGATCCACTAAAACAGCAC--------- t1186840 2 ------------------------------------------------------------------------------CAATGGATCCACTAAAACAG------------ t0440470 4 ------------------------------------------------------------------------------CAATGGATCCACTAAAACAGC----------- t3823113 1 ------------------------------------------------------------------------------CAATGGATCCACTAAAACAGCA---------- t0367904 4 // novel266 T24-m0400 scaffold64.0:880045:880154:+ 110(nt) -54.80(kcal/mol) TCGTGTTTGCGTTCTGTTTTAGTGTATCCATTATTCTTCTGCGTTCCCATTCTCAAGGATGATGGGACCTTAGAAGAACAATGGATCCACTAAAACAGCACATAAACACG T24-m0400 333 .((((((((.((.(((((((((((.(((((((.((((((((.(.(((((((.((...)).))))))).).)))))))).))))))).))))))))))).)).)))))))) *****************************************************************************ACAATGGATCCACTAAAACAGCA********** T24-m0400-3p 327 -----TTTGCGTTCTGTTTTAGTGTA------------------------------------------------------------------------------------ t0250240 6 -----------------------------------------------------------------------------ACAATGGATCCACTAAAAC-------------- t0505749 3 -----------------------------------------------------------------------------ACAATGGATCCACTAAAACAG------------ t0008105 96 -----------------------------------------------------------------------------ACAATGGATCCACTAAAACAGC----------- t0162283 8 -----------------------------------------------------------------------------ACAATGGATCCACTAAAACAGCA---------- t0002936 209 -----------------------------------------------------------------------------ACAATGGATCCACTAAAACAGCAC--------- t1186840 2 ------------------------------------------------------------------------------CAATGGATCCACTAAAACAG------------ t0440470 4 ------------------------------------------------------------------------------CAATGGATCCACTAAAACAGC----------- t3823113 1 ------------------------------------------------------------------------------CAATGGATCCACTAAAACAGCA---------- t0367904 4 // novel27 T24-m0027 scaffold1127.0:82618:82936:+ 319(nt) -77.40(kcal/mol) GAAAAATGTGGAGACCCCTACATTGTTGAAGAGAATCCACATATCCATGACCCTGATGATGTTTTCCCTGGCTTGCTCATTAGGATTACTCCACCAATCGAAGAAAGGTAGAATATTACTAGGTTTCTTTTCTCTCCTCTTTTGATTGTAATCTTGTAATATTTGATTTTCAACATGATGGAGAGGGCTAATGGCCTTAGTTTATTGATGGAGTTAACTTGCCACTTATTACTTCGGTTCAGTATAGTGGTATTAATTTATTTTTACGTGTAAGTGAAAGATTTTAAGTTCGACTTATGTAGATGGCTTAACTTAAATC T24-m0027 38 .......((.(((.((.((((((.((((((.((((((..(((...((((..((((((((.((...(....)...))))))))))...((((((.((((.(((((((..(((.......)))..))))))).((((((((..((((....((((...........)))).))))...)).))))))(((.....))).......)))).)))))).....(((((((...((((.......)))).)))))))..............))))...)))...))))))...))))))..))))))..))))).))....... **********************************************************************************************************************************************************************************************************************************************************************************************AGTTCGACTTATGTAGATGGCTT********** T24-m0027-3p 37 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // novel27 T24-m0072 scaffold142.0:191863:192181:- 319(nt) -77.40(kcal/mol) GAAAAATGTGGAGACCCCTACATTGTTGAAGAGAATCCACATATCCATGACCCTGATGATGTTTTCCCTGGCTTGCTCATTAGGATTACTCCACCAATCGAAGAAAGGTAGACTATTACTAGGTTTCTTTTCTCTCCTCTTTTGATTGTAATCTTGTAATATTTGATTTTCAACATGATGGAGAGGGCTAATGGCCTTAGTTTATTGATGGAGTTAACTTGCCACTTATTACTTCGGTTCAGTATAGTGGTATTAATTTATTTTTACGTGTAAGTGAAAGATTTTAAGTTCGACTTATGTAGATGGCTTAACTTAAATC T24-m0072 38 .......((.(((.((.((((((.((((((.((((((..(((...((((..((((((((.((...(....)...))))))))))...((((((.((((.(((((((..(((.......)))..))))))).((((((((..((((....((((...........)))).))))...)).))))))(((.....))).......)))).)))))).....(((((((...((((.......)))).)))))))..............))))...)))...))))))...))))))..))))))..))))).))....... **********************************************************************************************************************************************************************************************************************************************************************************************AGTTCGACTTATGTAGATGGCTT********** T24-m0072-3p 37 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // novel281 T24-m0361 scaffold54.1:88708:88799:- 92(nt) -28.50(kcal/mol) TGAGCAAGTGGCCATTTGCCACAGTGGTGAAAATGTGTTATGCCTTTGCATGCAGCGTGAGTTCGAACTTCGTAGGTGGCTAATTTGACATT T24-m0361 26 ...((((((((((((((((...(((..((((.((((..(((((....)))))..))))...)))).)))..)))))))))).))))).)... ***********************************************************AGTTCGAACTTCGTAGGTGGCTA********** T24-m0361-3p 25 ---------------------------------------------------------TGAGTTCGAACTTCGTAGGTGGCT----------- t3375630 1 // novel281 T37-m0385 scaffold54.1:88708:88799:- 92(nt) -28.50(kcal/mol) TGAGCAAGTGGCCATTTGCCACAGTGGTGAAAATGTGTTATGCCTTTGCATGCAGCGTGAGTTCGAACTTCGTAGGTGGCTAATTTGACATT T37-m0385 11 ...((((((((((((((((...(((..((((.((((..(((((....)))))..))))...)))).)))..)))))))))).))))).)... ***********************************************************AGTTCGAACTTCGTAGGTGGCTA********** T37-m0385-3p 11 ----------------------------------------------------------GAGTTCGAACTTCGTAGGTGGCTA---------- t0286019 3 ----------------------------------------------------------GAGTTCGAACTTCGTAGGTGGCTAA--------- t1056909 1 -----------------------------------------------------------AGTTCGAACTTCGTAGGTGGCTA---------- t0202504 5 -----------------------------------------------------------AGTTCGAACTTCGTAGGTGGCTAA--------- t3735847 1 -----------------------------------------------------------AGTTCGAACTTCGTAGGTGGCTAAT-------- t1377503 1 novel306 T24-m0399 scaffold64.0:868621:868773:+ 153(nt) -77.20(kcal/mol) TTGGGTAGTGCTATCCACACACTCCTTTTTACCTTCCACACACTCCATGTTAATTTCTATCCTTTCATCCTCTTCAATTCATTTGATCTGACAGCAGAAAATTGAAAGGGGTGTGTGAAAGGTAAAAAGGGTTGTGTGGATAGCACCACCCTT T24-m0399 18 ..((((.((((((((((((((..((((((((((((.((((((((((...(((((((((...((.(((......((((.....))))..))).)).)).)))))))..)))))))))).))))))))))))..)))))))))))))).)))).. **************************************************************************************************************************TAAAAAGGGTTGTGTGGATAG********** T24-m0399-3p 18 --------------------------------------------------------------------------------------------------------------------------TAAAAAGGGTTGTGTGGATAG---------- t0080120 15 ---------------------------------------------------------------------------------------------------------------------------AAAAAGGGTTGTGTGGATAGC--------- t0964571 2 ---------------------------------------------------------------------------------------------------------------------------AAAAAGGGTTGTGTGGATAGCA-------- t5378652 1 // novel306 T37-m0424 scaffold64.0:868621:868773:+ 153(nt) -77.20(kcal/mol) TTGGGTAGTGCTATCCACACACTCCTTTTTACCTTCCACACACTCCATGTTAATTTCTATCCTTTCATCCTCTTCAATTCATTTGATCTGACAGCAGAAAATTGAAAGGGGTGTGTGAAAGGTAAAAAGGGTTGTGTGGATAGCACCACCCTT T37-m0424 42 ..((((.((((((((((((((..((((((((((((.((((((((((...(((((((((...((.(((......((((.....))))..))).)).)).)))))))..)))))))))).))))))))))))..)))))))))))))).)))).. **************************************************************************************************************************TAAAAAGGGTTGTGTGGATAG********** T37-m0424-3p 42 --------------------------------------------------------------------------------------------------------------------------TAAAAAGGGTTGTGTGGATA----------- t0933934 1 --------------------------------------------------------------------------------------------------------------------------TAAAAAGGGTTGTGTGGATAG---------- t0017644 40 ---------------------------------------------------------------------------------------------------------------------------AAAAAGGGTTGTGTGGATAGC--------- t0926604 1 // novel308 T24-m0402 scaffold64.0:1088707:1088920:+ 214(nt) -49.90(kcal/mol) ATTATTTTTGAATGTGTGGTGTGGGCGTTGTGTTTGGCCCACGCCTGGGCATGAGGTTATGATTTTTGGGGATTTAAGAATGAGATGTGAGCCATGAGTTTGTCATGTTTTTGCCTATGATGAGTCGATGCCCCCCAACAATTCTGCCTATTTGAAAAAGAAAAAAAATAAAATGAGCTTTAACGAAAAGCCTACGGTACTGTTTACTTTAACA T24-m0402 29 ........((((((.(((.(((((((.((((((((.(((((....)))))...((((...((((.((((((.((((....))))......((..(((.((..(((((........)))))..)))))..)).)))))).))))..)))).........................))))....))))...))))))).)))))))))........ *************************************************************************************************************************************************************************************AACGAAAAGCCTACGGTACTGTT********** T24-m0402-3p 29 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAACGAAAAGCCTACGGTACTGT----------- t1440383 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGAAAAGCCTACGGTACTGT----------- t2247424 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGAAAAGCCTACGGTACTGTT---------- t0106687 12 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGAAAAGCCTACGGTACTGTTT--------- t0193236 7 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAAAAGCCTACGGTACTGTTT--------- t1155736 2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAAAAGCCTACGGTACTGTTTA-------- t0395443 4 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAAAAGCCTACGGTACTGT----------- t4181438 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAGCCTACGGTACTGTTTAC------- t5371409 1 // novel312 T24-m0406 scaffold663.0:187352:187486:- 135(nt) -50.50(kcal/mol) AATTCAAGTTTGAGTTGTTGGAATGTTTAGGCATTTCTTTGATTTCAATGTTTAAATTCAATTCTCTTTGTTTTGTACGTATGAGGAATGGAAGAGAAGAGTGCCTAAACGTTCATACAATTCAAGTTTGAGTTG T24-m0406 26 (((((((..(((((((((..(((((((((((((((.((((..(((((.((........)).(((((..(((.....)))...))))).)))))..)))))))))))))))))))..)))))))))..))))))). **********TGAGTTGTTGGAATGTTTAGGCA****************************************************************************************************** T24-m0406-5p 26 --------TTTGAGTTGTTGGAATGTTTAGGCA------------------------------------------------------------------------------------------------------ t0368257 4 ---------TTGAGTTGTTGGAATGTTTAGGCA------------------------------------------------------------------------------------------------------ t0939702 2 ----------TGAGTTGTTGGAATGTTTAGGCA------------------------------------------------------------------------------------------------------ t0113887 11 ----------TGAGTTGTTGGAATGTTTAGGCAT----------------------------------------------------------------------------------------------------- t0523528 3 -----------GAGTTGTTGGAATGTTTAGGCA------------------------------------------------------------------------------------------------------ t0466317 3 ------------AGTTGTTGGAATGTTTAGGCA------------------------------------------------------------------------------------------------------ t5328965 1 ------------AGTTGTTGGAATGTTTAGGCAT----------------------------------------------------------------------------------------------------- t3060985 1 -------------GTTGTTGGAATGTTTAGGCATT---------------------------------------------------------------------------------------------------- t3918660 1 // novel337 T24-m0442 scaffold80.0:102843:102960:- 118(nt) -29.20(kcal/mol) GGAGCTTTAGGATCCTTTACTGTAGATTTTGTATTCATGGGCATTGGTCTTGTTGATGCTTTAGGGCAAACGACGATAGGTTGGAATGGTATACAAAGTCAACAGATCTTACTAAATA T24-m0442 131 (((.(.....).)))....((((.((((((((((((((.(((....((((((((..((((....))))))))).)))..)))...)))).)))))))))).))))............. ***************************************************************************************GGTATACAAAGTCAACAGATC********** T24-m0442-3p 131 ------------------------------------------------------------------------------------AATGGTATACAAAGTCAACAG------------- t4723991 1 -------------------------------------------------------------------------------------ATGGTATACAAAGTCAACAG------------- t3611416 1 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAG------------- t0055949 20 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAGA------------ t0247916 6 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAGAT----------- t0078739 15 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAGATC---------- t0019958 47 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAGATCT--------- t0303597 5 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAGATCTT-------- t1136306 2 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAGATCTTA------- t0385082 4 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAGATCTTAC------ t0039418 27 ----------------------------------------------------------------------------------------GTATACAAAGTCAACAGATC---------- t5481461 1 ----------------------------------------------------------------------------------------GTATACAAAGTCAACAGATCTTAC------ t3453337 1 ----------------------------------------------------------------------------------------GTATACAAAGTCAACAGATCTTACT----- t4085794 1 // novel337 T37-m0477 scaffold80.0:102843:102960:- 118(nt) -29.20(kcal/mol) GGAGCTTTAGGATCCTTTACTGTAGATTTTGTATTCATGGGCATTGGTCTTGTTGATGCTTTAGGGCAAACGACGATAGGTTGGAATGGTATACAAAGTCAACAGATCTTACTAAATA T37-m0477 364 (((.(.....).)))....((((.((((((((((((((.(((....((((((((..((((....))))))))).)))..)))...)))).)))))))))).))))............. ***************************************************************************************GGTATACAAAGTCAACAGATC********** T37-m0477-3p 364 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAG------------- t0074699 11 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAGA------------ t0028168 26 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAGAT----------- t0032439 23 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAGATC---------- t0002928 189 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAGATCT--------- t0029189 25 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAGATCTT-------- t0191664 5 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAGATCTTA------- t0064671 12 ---------------------------------------------------------------------------------------GGTATACAAAGTCAACAGATCTTAC------ t0012793 53 ----------------------------------------------------------------------------------------GTATACAAAGTCAACAGATC---------- t0207065 5 ----------------------------------------------------------------------------------------GTATACAAAGTCAACAGATCT--------- t1805854 1 ----------------------------------------------------------------------------------------GTATACAAAGTCAACAGATCTT-------- t0992567 1 ----------------------------------------------------------------------------------------GTATACAAAGTCAACAGATCTTAC------ t0166344 5 ----------------------------------------------------------------------------------------GTATACAAAGTCAACAGATCTTACT----- t0104985 8 // novel338 T24-m0443 scaffold80.0:872929:873062:- 134(nt) -68.30(kcal/mol) TAATTTCTCAGAACCTTATCTTTCCAATCTAGAATAGTCACTACCTCCTCAACCTTTGGAAATTAATCTAGATTTGACTTATGATGAAGAGCCAGTGACTATTTTGGATTGGAAAGATAAGGTTTTGAGAAATT T24-m0443 16 .(((((((((((((((((((((((((((((((((((((((((..(((.(((...((((((......)))))).....(....).))).)))..))))))))))))))))))))))))))))))))))))))))) ******************************************************************************************************TTTGGATTGGAAAGATAAGGTT********** T24-m0443-3p 16 ------------------------------------------------------------------------------------------------------TTTGGATTGGAAAGATAAGGTT---------- t0100234 12 ------------------------------------------------------------------------------------------------------TTTGGATTGGAAAGATAAGGTTT--------- t2441914 1 -------------------------------------------------------------------------------------------------------TTGGATTGGAAAGATAAGGTT---------- t3704855 1 --------------------------------------------------------------------------------------------------------TGGATTGGAAAGATAAGGTTT--------- t4346790 1 --------------------------------------------------------------------------------------------------------TGGATTGGAAAGATAAGGTTTTGA------ t4816852 1 // novel338 T37-m0478 scaffold80.0:872929:873062:- 134(nt) -68.30(kcal/mol) TAATTTCTCAGAACCTTATCTTTCCAATCTAGAATAGTCACTACCTCCTCAACCTTTGGAAATTAATCTAGATTTGACTTATGATGAAGAGCCAGTGACTATTTTGGATTGGAAAGATAAGGTTTTGAGAAATT T37-m0478 29 .(((((((((((((((((((((((((((((((((((((((((..(((.(((...((((((......)))))).....(....).))).)))..))))))))))))))))))))))))))))))))))))))))) ******************************************************************************************************TTTGGATTGGAAAGATAAGGTT********** T37-m0478-3p 29 ----------------------------------------------------------------------------------------------------ATTTTGGATTGGAAAGATAAGGT----------- t2904659 1 ----------------------------------------------------------------------------------------------------ATTTTGGATTGGAAAGATAAGGTT---------- t0653835 2 ------------------------------------------------------------------------------------------------------TTTGGATTGGAAAGATAAGGTT---------- t0039470 19 ------------------------------------------------------------------------------------------------------TTTGGATTGGAAAGATAAGGTTT--------- t0357281 3 -------------------------------------------------------------------------------------------------------TTGGATTGGAAAGATAAGGTT---------- t0477273 2 -------------------------------------------------------------------------------------------------------TTGGATTGGAAAGATAAGGTTTTG------- t3425447 1 --------------------------------------------------------------------------------------------------------TGGATTGGAAAGATAAGGTTTT-------- t3423813 1 // novel348 T24-m0454 scaffold848.0:130625:130809:+ 185(nt) -71.76(kcal/mol) AGACTTTCTCCTCCGCCTCCTCCGTCGCCACACCCCAGGTTTTGGGAAGCTCCGATTGGTCGAAATCCGAACATAGGGCCACCGGTTCTTATCACGCCTTCTCGACCTACTGTGCTTCAAACTTCGGGGAAGGTGGGGGTGGGATGGGGCGGGTTTTTGGATAGGAGGGGAGGTGAAAAGAGTTA T24-m0454 35 .(((((((.(((((.(((((((((..(((.(.((((.(((..((..(((..(((..(((((...............))))).)))..)))..)).))).(((((.((((((...((((.......))))..))))))..))))).)))).))))...))))..)))))))))).))...))))). *********************************************************************************************************************************************************TTTTTGGATAGGAGGGGAGGTG********** T24-m0454-3p 35 ------------------------------------------------------------------------------------------------------------------------------------------------------GGGTTTTTGGATAGGAGGGGA-------------- t0779095 2 ------------------------------------------------------------------------------------------------------------------------------------------------------GGGTTTTTGGATAGGAGGGGAG------------- t3284205 1 --------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTTGGATAGGAGGGGAGGTGA--------- t2455719 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGGATAGGAGGGGAGGTG---------- t0074918 16 ---------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGGATAGGAGGGGAGGTGA--------- t0454875 3 ---------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGGATAGGAGGGGAGGTGAA-------- t1307995 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGATAGGAGGGGAGGTG---------- t0741051 2 ----------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGATAGGAGGGGAGGTGA--------- t0246153 6 -----------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATAGGAGGGGAGGTGA--------- t0460085 3 // novel348 T24-m0455 scaffold848.0:68056:68240:- 185(nt) -71.76(kcal/mol) AGACTTTCTCCTCCGCCTCCTCCGTCGCCACACCCCAGGTTTTGGGAAGCTCCGATTGGTCGAAATCCGAACATAGGGCCACCGGTTCTTATCACGCCTTCTCGACCTACTGTGCTTCAAACTTCGGGGAAGGTGGGGGTGGGATGGGGCGGGTTTTTGGATAGGAGGGGAGGTGAAAAGAGTTA T24-m0455 35 .(((((((.(((((.(((((((((..(((.(.((((.(((..((..(((..(((..(((((...............))))).)))..)))..)).))).(((((.((((((...((((.......))))..))))))..))))).)))).))))...))))..)))))))))).))...))))). *********************************************************************************************************************************************************TTTTTGGATAGGAGGGGAGGTG********** T24-m0455-3p 35 ------------------------------------------------------------------------------------------------------------------------------------------------------GGGTTTTTGGATAGGAGGGGA-------------- t0779095 2 ------------------------------------------------------------------------------------------------------------------------------------------------------GGGTTTTTGGATAGGAGGGGAG------------- t3284205 1 --------------------------------------------------------------------------------------------------------------------------------------------------------GTTTTTGGATAGGAGGGGAGGTGA--------- t2455719 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGGATAGGAGGGGAGGTG---------- t0074918 16 ---------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGGATAGGAGGGGAGGTGA--------- t0454875 3 ---------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTGGATAGGAGGGGAGGTGAA-------- t1307995 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGATAGGAGGGGAGGTG---------- t0741051 2 ----------------------------------------------------------------------------------------------------------------------------------------------------------TTTTGGATAGGAGGGGAGGTGA--------- t0246153 6 -----------------------------------------------------------------------------------------------------------------------------------------------------------TTTGGATAGGAGGGGAGGTGA--------- t0460085 3 // novel363 T24-m0478 scaffold94.0:516128:516232:+ 105(nt) -52.80(kcal/mol) TGTAAAGAAGGTGACAGAAGAGAGTGAGCACACGTGGTTCTTTTCTTGCATGAATCCATGTCGGAAGCTCTGTGTGTTCATTCTCTATCTGTCACCTACCATCCT T24-m0478 7 ........((((((((((((((((((((((((((.(((....((((.(((((....))))).))))))).)))))))))))))))).))))))))))........ **********GTGACAGAAGAGAGTGAGCAC************************************************************************** T24-m0478-5p 7 ----------GTGACAGAAGAGAGTGAGCAC-------------------------------------------------------------------------- t0202898 7 // novel363 T37-m0240 scaffold3.0:1985648:1985754:+ 107(nt) -56.50(kcal/mol) GTAAAGGACGGTGACAGAAGAGAGTGAGCACACATGGTATTTTCTTGCATGCTGGGTTCATGCTTGAAGCTTTGTGTGCTTACTCTCTATCTGTCACCCACCTCTCT T37-m0240 25 ....(((..(((((((((((((((((((((((((.(((...(((..(((((.......)))))..)))))).)))))))))))))))).)))))))))..))).... **********GTGACAGAAGAGAGTGAGCAC**************************************************************************** T37-m0240-5p 24 --------CGGTGACAGAAGAGAGTGAGC------------------------------------------------------------------------------ t0106792 8 --------CGGTGACAGAAGAGAGTGAGCA----------------------------------------------------------------------------- t0730536 2 ---------GGTGACAGAAGAGAGTGAGCAC---------------------------------------------------------------------------- t2454353 1 ----------GTGACAGAAGAGAGTGAGCAC---------------------------------------------------------------------------- t0060845 13 ---------------AGAAGAGAGTGAGCACACATGGT--------------------------------------------------------------------- t3029851 1 // novel363 T37-m0519 scaffold94.0:516128:516232:+ 105(nt) -52.80(kcal/mol) TGTAAAGAAGGTGACAGAAGAGAGTGAGCACACGTGGTTCTTTTCTTGCATGAATCCATGTCGGAAGCTCTGTGTGTTCATTCTCTATCTGTCACCTACCATCCT T37-m0519 14 ........((((((((((((((((((((((((((.(((....((((.(((((....))))).))))))).)))))))))))))))).))))))))))........ **********GTGACAGAAGAGAGTGAGCAC************************************************************************** T37-m0519-5p 14 ---------GGTGACAGAAGAGAGTGAGCAC-------------------------------------------------------------------------- t2454353 1 ----------GTGACAGAAGAGAGTGAGCAC-------------------------------------------------------------------------- t0060845 13 // novel379 T37-m0014 scaffold101.0:744867:744996:+ 130(nt) -23.00(kcal/mol) TAATTATGTTTCGTTTTTTTATTTATCTTTTCCAGCCAATTATGTCTTAAAAGAAAAACTTACATGATTATTTTTTGTTAAATTAGTTTTGTGATGGGAAGGCGATGAAGAAGAAAACATTTCTCGATTC T37-m0014 34 ............((((((((.((((((((((((...........(((....))).....(((((.(((((.(((.....))).))))).)))))..)))))).)))))).))))))))............ ***************************************************************************************************AGGCGATGAAGAAGAAAACAT********** T37-m0014-3p 34 ---------------------------------------------------------------------------------------------------AGGCGATGAAGAAGAAAACA----------- t0113268 8 ---------------------------------------------------------------------------------------------------AGGCGATGAAGAAGAAAACAT---------- t0075954 11 ---------------------------------------------------------------------------------------------------AGGCGATGAAGAAGAAAACATT--------- t0382532 3 ---------------------------------------------------------------------------------------------------AGGCGATGAAGAAGAAAACATTT-------- t0081760 10 ---------------------------------------------------------------------------------------------------AGGCGATGAAGAAGAAAACATTTC------- t1272897 1 ---------------------------------------------------------------------------------------------------AGGCGATGAAGAAGAAAACATTTCT------ t1559346 1 // novel385 T37-m0027 scaffold112.0:305682:305818:- 137(nt) -44.80(kcal/mol) ATTGAAAGGGTTGTTGAAGTAGCTGCCGACTCATTCACTCAAGCACTCAGTAGAGATTAAAGGAGTGTAAACGCAGACAATTTGCTACTGTGATTGTGTGAATGAAGCGGGAGATATTTTACATCCCTCTTGCTCTG T37-m0027 61 ...((.((((.(((.((((((.((.(((..((((((((.(((...(.(((((((((((....(.((....)).)....))))).)))))).).))).))))))))..))).)).))))))))).)))).))...... ********************AGCTGCCGACTCATTCACTCA************************************************************************************************ T37-m0027-5p 11 ************************************************************************************************TGTGAATGAAGCGGGAGATAT******************** T37-m0027-3p 48 ----------TTGTTGAAGTAGCTGCCGACTC--------------------------------------------------------------------------------------------------------- t3085308 1 --------------------AGCTGCCGACTCATTCACTCA------------------------------------------------------------------------------------------------ t0077407 11 --------------------------------------------------------------------------------------ACTGTGATTGTGTGAATGAAGCGG--------------------------- t1684517 1 ------------------------------------------------------------------------------------------------TGTGAATGAAGCGGGAGATAT-------------------- t0014646 47 ------------------------------------------------------------------------------------------------TGTGAATGAAGCGGGAGATATT------------------- t2466843 1 // novel393 T37-m0044 scaffold12.0:1089501:1089786:- 286(nt) -119.40(kcal/mol) GTTTGGTACGCATGATTGGATTGGAATGGAGAACACTCGAATTTGAAGGTATACTGATGGTGGAAGTGAATGGTTTTTCATCCCGAGGGGATTAGAAATGGATTAGCTATGAAGTATATTCATCCCATCTAATTCTACCATTTTAAGGAGGAATGGAATGGATAAGTTTTCTTCTTAAGTAATCCATCTTCTATCCTCGAAGCGGTCATGATTTTATCATTTCTCCCGTCAACATACCTTTAATTTAGTAGGTTATCCATTCCAATCCAATCAGGTGCACCAAATG T37-m0044 39 (((((((.(((.((((((((((((((((((.(((.(((....((((((((((..((((((..(((((((.(((....((((.(((.((((((.((((((((((((..((.((((...(((.((((..((((.((((.((.......)))))).))))..)))).)))...)))).))..)))))))).))))))))))....)))..))))..))))))))))..))))))..))))))))))....).))))).)))))))))))))))))).))).))))))). **********CATGATTGGATTGGAATGGAG*************************************************************************************************************************************************************************************************************************************************************** T37-m0044-5p 38 -TTTGGTACGCATGATTGGATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------CATGATTGGATTGGAATGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------CATGATTGGATTGGAATGGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------CATGATTGGATTGGAATGGAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // novel393 T37-m0045 scaffold12.0:1098053:1098339:- 287(nt) -122.90(kcal/mol) GTTTGGTACGCATGATTGGATTGGAATGGAGAACACTTGAATTTCAAGGTATACTGAAGGTGGAAGTTGGATGGTTTTTCATTTGGAGGGGATTAGAAGTGGATTAGCTATGAAGTAAATTCATCCCATCTAATCCTACCATTTTAAGGAGGATTGGACTGGATAAGTTTTCTTCGTAAGTAATCCATCTTCTATCCTCGAAGCGGTCATGATTTTATCATTTCTCCCGTCAACATACCTTTAATTTAGTAGGTTATCCATTCCAATCCAATCAAGTGCACCAAATG T37-m0045 39 (((((((.(((.((((((((((((((((((.(((..(((((((..(((((((..(((.((..(((((..(((((....((((.(.(.((((((.((((((((((((..(((((((.(((((.((((..(((((((((.((.......)))))))))))..)))).))))).)))))))..))))))).)))))))))))....).)..))))..))))))))))..)).)))..))))))).)))))))...))).)))))))))))))))))).))).))))))). **********CATGATTGGATTGGAATGGAG**************************************************************************************************************************************************************************************************************************************************************** T37-m0045-5p 38 -TTTGGTACGCATGATTGGATTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------CATGATTGGATTGGAATGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------CATGATTGGATTGGAATGGAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------CATGATTGGATTGGAATGGAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // novel395 T37-m0049 scaffold1216.0:84252:84457:+ 206(nt) -67.10(kcal/mol) TCTCTTAATCTTCACTTGAAGATCGTTCCTACAAAAAATCATTCGAATCAGATATTGTTGAGTATGTATGAAATCAATAAACAGTTCATCATGAACATGCAATTTGGTACTGACATTGTTGATTTATTTGATACATTGGATGATTAAACAATATCCGATTTAAATGATTTTTAGTACAAATGATCTTCAAATGAAAACTAAGAGAT T37-m0049 49 (((((((.(.((((.((((((((((((..(((.((((((((((..((((.(((((((((.(((((((((.((((((((((.(((((((...((......))...))).))))...)))))))))).....))))))......))).))))))))).))))..)))))))))).)))..)))))))))))).)))).).))))))). **********TTCACTTGAAGATCGTTCCTA******************************************************************************************************************************************************************************* T37-m0049-5p 48 --------TCTTCACTTGAAGATCGTTCCTAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t2966984 1 ---------CTTCACTTGAAGATCGTTCCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0387218 3 ---------CTTCACTTGAAGATCGTTCCTAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t2820620 1 ---------CTTCACTTGAAGATCGTTCCTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0260396 4 ----------TTCACTTGAAGATCGTTCCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0018779 38 -------------ACTTGAAGATCGTTCCTACAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3449787 1 ----------------TGAAGATCGTTCCTACAAAAAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1912781 1 // novel395 T37-m0459 scaffold731.0:205272:205477:+ 206(nt) -67.10(kcal/mol) TCTCTTAATCTTCACTTGAAGATCGTTCCTACAAAAAATCATTCGAATCAGATATTGTTGAGTATGTATGAAATCAATAAACAGTTCATCATGAACATGCAATTTGGTACTGACATTGTTGATTTATTTGATACATTGGATGATTAAACAATATCCGATTTAAATGATTTTTAGTACAAATGATCTTCAAATGAAAACTAAGAGAT T37-m0459 49 (((((((.(.((((.((((((((((((..(((.((((((((((..((((.(((((((((.(((((((((.((((((((((.(((((((...((......))...))).))))...)))))))))).....))))))......))).))))))))).))))..)))))))))).)))..)))))))))))).)))).).))))))). **********TTCACTTGAAGATCGTTCCTA******************************************************************************************************************************************************************************* T37-m0459-5p 48 --------TCTTCACTTGAAGATCGTTCCTAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t2966984 1 ---------CTTCACTTGAAGATCGTTCCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0387218 3 ---------CTTCACTTGAAGATCGTTCCTAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t2820620 1 ---------CTTCACTTGAAGATCGTTCCTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0260396 4 ----------TTCACTTGAAGATCGTTCCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0018779 38 -------------ACTTGAAGATCGTTCCTACAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3449787 1 ----------------TGAAGATCGTTCCTACAAAAAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1912781 1 // novel395 T37-m0460 scaffold731.0:81600:81805:- 206(nt) -67.10(kcal/mol) TCTCTTAATCTTCACTTGAAGATCGTTCCTACAAAAAATCATTCGAATCAGATATTGTTGAGTATGTATGAAATCAATAAACAGTTCATCATGAACATGCAATTTGGTACTGACATTGTTGATTTATTTGATACATTGGATGATTAAACAATATCCGATTTAAATGATTTTTAGTACAAATGATCTTCAAATGAAAACTAAGAGAT T37-m0460 49 (((((((.(.((((.((((((((((((..(((.((((((((((..((((.(((((((((.(((((((((.((((((((((.(((((((...((......))...))).))))...)))))))))).....))))))......))).))))))))).))))..)))))))))).)))..)))))))))))).)))).).))))))). **********TTCACTTGAAGATCGTTCCTA******************************************************************************************************************************************************************************* T37-m0460-5p 48 --------TCTTCACTTGAAGATCGTTCCTAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t2966984 1 ---------CTTCACTTGAAGATCGTTCCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0387218 3 ---------CTTCACTTGAAGATCGTTCCTAC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t2820620 1 ---------CTTCACTTGAAGATCGTTCCTACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0260396 4 ----------TTCACTTGAAGATCGTTCCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0018779 38 -------------ACTTGAAGATCGTTCCTACAAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3449787 1 ----------------TGAAGATCGTTCCTACAAAAAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1912781 1 // novel412 T37-m0072 scaffold137.0:397576:397821:+ 246(nt) -47.90(kcal/mol) ATTTCATTGCACACCGTCGATTTTACAACAATGAACAAATTTTCAGATTACATATGCAAAAAAATTCTTTAGTAGGCCAAAAATCAATTGAATCTTGATAACCCTTTCTTTTTCTTTCTAAAAGCAACGAAACGAAGGGTTCATCACCGAATCAGAATCTTGTTCATAATTGAAATGGTGGGGTCAGGGTTTGTTGACAATTAAAACGTGTTCGTTCATTGTACATCGTGCGGTCAAATTTTGTCA T37-m0072 87 ............(((((((((..(((((.((((((((..((((...........(((.(((......))).))).........(((((.((((((((((((((((((.((((.(((.....)))....)))).))))))))..((((((..(((((((...)))).....)))..)))))).))))))))))))))).....))))..))))))))..))))).)))).)))))............ *********************************************************************************************************************************************************************************************************************GTTCATTGTACATCGTGCGGTCA********** T37-m0072-3p 84 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGTGTTCGTTCATTGTACATCGT----------------- t3577302 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTGTTCGTTCATTGTACATCGTG---------------- t3093887 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGTTCATTGTACATCGTGCGG------------- t2863971 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTCATTGTACATCGTGCGG------------- t1089365 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTCATTGTACATCGTGCGGT------------ t0733832 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTTCATTGTACATCGTGCGGTC----------- t0054110 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTCATTGTACATCGTGCGGTC----------- t0498114 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTCATTGTACATCGTGCGGTCA---------- t0414617 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCATTGTACATCGTGCGGT------------ t0465120 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCATTGTACATCGTGCGGTCA---------- t0016373 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCATTGTACATCGTGCGGTCAA--------- t1485502 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCATTGTACATCGTGCGGTC----------- t0153552 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTGTACATCGTGCGGTCA---------- t0103445 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTGTACATCGTGCGGTCAA--------- t2165165 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGTACATCGTGCGGTCA---------- t0814749 // novel413 T37-m0074 scaffold138.0:605384:605609:- 226(nt) -43.20(kcal/mol) ATTAGCCATGGCTGAATTCACACTCCAATTTTCAGTGTCTATTTCCAGACGGCGTAAAGACAAAGTTAAAAATCAAATGGGTGTACAAATAAATCCACATATTGAATTGGGTTTATGAGGGTATATTAGGTAGTAAATTAGGGTTTAAAGAGATATTAATAGTTTAGTTAAAAATCAAATGGGTGTAAAGAGTAAGTTGGGTGTAGAAATAGGTTACATGGGTTTA T37-m0074 40 .....((((((((...(((((((.(((((((.(..(((((....((....)).....)))))...(((...(((.....(((((((..(((((((((..........)))))))))....)))))))......(((((((..((((....)))).....)))))))...............))).)))...).))))))))))).)))...)))..)))))..... *************************************************************************************************************************************************************************************************AAGTTGGGTGTAGAAATAGGTTA********** T37-m0074-3p 39 --------------------------------------------CCAGACGGCGTAAAGACAAAGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t1134881 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAAGTTGGGTGTAGAAATAGGT------------ t0180726 5 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAGTTGGGTGTAGAAATAGGTT----------- t0189393 5 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTGGGTGTAGAAATAGGTT----------- t1193395 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTGGGTGTAGAAATAGGTTA---------- t0064271 13 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTGGGTGTAGAAATAGGTTAC--------- t0067739 12 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGGTGTAGAAATAGGTTA---------- t2155264 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGGTGTAGAAATAGGTTAC--------- t0568804 2 // novel413 T37-m0261 scaffold323.0:221180:221358:- 179(nt) -28.80(kcal/mol) TTTAAAATTTAAGTTGGGTGTAGAAATAGGTTACATGGTTTAAATAAAATTTTCCTTTTATATAGTGTCTAGTTCTTGGGTCATATTTTATAAACAATTCTAACTTCCTTCAATTCTCATCAAATTTCTCAGAATCTCTTCAATTTCTTAGCCTTCTACCCCAATTACTTAGTTTGGAA T37-m0261 29 ((((((.....(((((((.(((((...((((((....(((((..((((((...(((......(((...)))......)))....)))))))))))....................................(((....))).......))))))))))))))))))......)))))). **********AAGTTGGGTGTAGAAATAGGTTA************************************************************************************************************************************************** T37-m0261-5p 29 ----------AAGTTGGGTGTAGAAATAGGTT--------------------------------------------------------------------------------------------------------------------------------------------------- t1193395 1 ----------AAGTTGGGTGTAGAAATAGGTTA-------------------------------------------------------------------------------------------------------------------------------------------------- t0064271 13 ----------AAGTTGGGTGTAGAAATAGGTTAC------------------------------------------------------------------------------------------------------------------------------------------------- t0067739 12 -------------TTGGGTGTAGAAATAGGTTA-------------------------------------------------------------------------------------------------------------------------------------------------- t2155264 1 -------------TTGGGTGTAGAAATAGGTTAC------------------------------------------------------------------------------------------------------------------------------------------------- t0568804 2 // novel413 T37-m0292 scaffold37.0:855449:855741:- 293(nt) -60.20(kcal/mol) GCTGCCTGTAATGGCTGAATTCACACCCCAATTTTCAGTATAAAAGTGTATAAAAGTGTCAGTCTTGTTGTCAGTCATGGCTGAATTCACACCCTAATTTTCAGTGTCCGTTTCCAGACAGAGTAAAGATAGTTAAAAATCAAATGGGTGAAAAGAAAAATCTACATATTGAATTGGGTTTATGGGGGTATAATAGGTAATAAATTTGGGTTTAAAGAGATATTAATAGTTTAGTTAAAAATCAAATGGATGCAATAAGTAAGTTGGGTGTAGAAATAGGTTACAAAGGTTTA T37-m0292 39 ...((((....(((((...(((((((((.(((((.(.(((((....)))))....(((((...(((((((((..((((((((.(((((((((((..........((((........)))).......(((........)))....)))))...(((....)))......)))))).)).))))))..).))))))))......((((((.(((((..((((.......))))..)))))..)))))).))))).....).))))))))))).)))...)))))...))))... ********************************************************************************************************************************************************************************************************************************************************************AAGTTGGGTGTAGAAATAGGTTA********** T37-m0292-3p 39 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // novel421 T37-m0094 scaffold150.0:108252:108351:- 100(nt) -22.30(kcal/mol) CCCTTTTCGACGGGAAGACTCACAGAGGCATTTTAGCCTTTTTTTTTTTTTTTAGGAAATTGATGAAACCCTACTGTTCAAGTTTTCTCGGCTCACAATT T37-m0094 21 ..........((((((((((.(((((((..(((((..(..((((((.......))))))..).))))).))).))))...)))))))))).......... **********CGGGAAGACTCACAGAGGCAT********************************************************************* T37-m0094-5p 21 ----------CGGGAAGACTCACAGAGGCA---------------------------------------------------------------------- t0419850 2 ----------CGGGAAGACTCACAGAGGCAT--------------------------------------------------------------------- t0107832 8 ----------CGGGAAGACTCACAGAGGCATT-------------------------------------------------------------------- t0161185 6 ----------CGGGAAGACTCACAGAGGCATTT------------------------------------------------------------------- t3030789 1 ----------CGGGAAGACTCACAGAGGCATTTT------------------------------------------------------------------ t0639886 2 -----------GGGAAGACTCACAGAGGCAT--------------------------------------------------------------------- t1278775 1 ------------GGAAGACTCACAGAGGCATT-------------------------------------------------------------------- t2192793 1 // novel423 T37-m0097 scaffold156.0:132777:132938:+ 162(nt) -43.90(kcal/mol) TTTATGACTCGGAGTTCTCATCCGATTCGTGAACATATCCTGGAGTGATTGGGTTCTTCGTCCGGCTGCAAGACGTAAAAGAAAGCGCTACTTGGGAGGCAACCCAATGCACTGAATAAAACAAAGCATGTTCATTGATTTTCGAGAATTACGAGTGCGGAA T37-m0097 44 ......(((((.(((((((....((((.((((((((....((.((((((((((((((((..((((.....((.(((........)))))..)))))))).)))))))).))))........))....)))))))).))))...))))))).)))))...... ***********************************************************************************************************************************TCATTGATTTTCGAGAATTAC********** T37-m0097-3p 44 --------------------------------------------------------------------------------------------------------------------------------TGTTCATTGATTTTCGAGAAT------------- t3041290 1 --------------------------------------------------------------------------------------------------------------------------------TGTTCATTGATTTTCGAGAATT------------ t2773833 1 --------------------------------------------------------------------------------------------------------------------------------TGTTCATTGATTTTCGAGAATTAC---------- t3216817 1 ----------------------------------------------------------------------------------------------------------------------------------TTCATTGATTTTCGAGAATTA----------- t0380894 3 ----------------------------------------------------------------------------------------------------------------------------------TTCATTGATTTTCGAGAATTAC---------- t0063268 13 -----------------------------------------------------------------------------------------------------------------------------------TCATTGATTTTCGAGAATTAC---------- t0028990 25 // novel429 T37-m0106 scaffold164.0:589916:590115:+ 200(nt) -41.30(kcal/mol) TGGAATCTTATCAGTGATAATAGGAAGAGCAAAAGAAACATAATCACTATACCGAGTTGGGTTGGTAATATTTCTCTCTCCTCTGTTCTTGGAAATAGACTCGTGTGGTGAAACTTGCTCTTCATCTAGAAAAGAATTTTCAACTTCAACTTCTTCAACATCCTCATGGTCTTCCACTTTTTCACTTGTAGTGACTTTAA T37-m0106 24 ((((.((((((.(((((.((..((((((.((..((........(((((((((.((((((((..(......)..)))..(((.........)))....))))))))))))))..(((..(((......))).)))............................))..)).))))))...)).))))).)))).)).)))). **********TCAGTGATAATAGGAAGAGCAA************************************************************************************************************************************************************************ T37-m0106-5p 23 ---------ATCAGTGATAATAGGAAGAGCAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0207812 5 ----------TCAGTGATAATAGGAAGAGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1385671 1 ----------TCAGTGATAATAGGAAGAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0438922 2 ----------TCAGTGATAATAGGAAGAGCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0149517 6 ----------TCAGTGATAATAGGAAGAGCAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0532996 2 ----------TCAGTGATAATAGGAAGAGCAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0374730 3 -----------CAGTGATAATAGGAAGAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3389657 1 -----------CAGTGATAATAGGAAGAGCAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0774248 2 -----------CAGTGATAATAGGAAGAGCAAAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0997042 1 -------------------ATAGGAAGAGCAAAAGAAACATAA------------------------------------------------------------------------------------------------------------------------------------------------------------- t3101899 1 // novel438 T37-m0120 scaffold170.2:115946:116158:+ 213(nt) -59.40(kcal/mol) TGGGTTACAAGTTCACGTGACTGAACTCGGCAATTGCAGCTGCACGGGTCAGCTATATAAAGGAATAAGTTTCTGATTAGCTGGTCGATGTGGGACTAAGAAAACAAGTCCACACTTCACATATTAACGTGAATCTCTCTCCTCTATCTGCTCTCTCTCTAATCTGCGGACTGCCATCATTCCCGAGGCTATCACTCTGGAACATGTTGCAAA T37-m0120 116 ...((.(((.((((..((((.((..(((((.(((.(((((((((..(..((((((.....(((((....)))))...))))))..)...((((((((.........))))).))).((((........))))................................))))).))))....))).)))))..))))))....)))).))).))... **********GTTCACGTGACTGAACTCGGCA************************************************************************************************************************************************************************************* T37-m0120-5p 116 --------AAGTTCACGTGACTGAACTCGGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2010876 1 ---------AGTTCACGTGACTGAACTCGGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0078780 11 ----------GTTCACGTGACTGAACTCGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1361652 1 ----------GTTCACGTGACTGAACTCGGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0011457 58 -----------TTCACGTGACTGAACTCGGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0140343 6 -----------TTCACGTGACTGAACTCGGCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0193740 5 ------------TCACGTGACTGAACTCGGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0065365 12 ------------TCACGTGACTGAACTCGGCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0048888 16 -------------CACGTGACTGAACTCGGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0198670 5 -------------CACGTGACTGAACTCGGCAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t2766305 1 // novel439 T37-m0121 scaffold171.0:315538:315755:- 218(nt) -59.80(kcal/mol) GAACCAAGACCACCCTCGTGCTCGTGAGGCTGAGAGGAGTCCAGTGGTACCATTTTCAGGTAAGGTTGTAGCCGTTTTCACGTCGATTCAACAATGGCAGTTTTGAGTACTATTCATGCAAAGTTTATTTAGCACGTTTTTGGGATTTTTTTAAGCTTGTAGGTAGCTTGGTGGTGTCCCAAGGAGCCTCGGAGTGCTTCGTTGGACAAATTTGGACG T37-m0121 23 .............((((..(((.....)))...)))).((((((((.((((.......)))).(((....))).....)))...(.((((((...((((.(((((((.........((((((.....))).)))..((((((((((....(((((((.......)))))))....))))))))))..)))))))))))..))))))).....))))). *****************************************************************************************************************************************************************************************GCCTCGGAGTGCTTCGTTGGACA********** T37-m0121-3p 22 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCAAGGAGCCTCGGAGTGCTT------------------- t0823041 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCTCGGAGTGCTTCGTTGGACA---------- t0193831 5 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTCGGAGTGCTTCGTTGGACA---------- t0058240 14 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGAGTGCTTCGTTGGACA---------- t0714954 2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGAGTGCTTCGTTGGACAA--------- t1762311 1 // novel439 T37-m0346 scaffold447.0:368432:368649:- 218(nt) -59.80(kcal/mol) GAACCAAGACCACCCTCGTGCTCGTGAGGCTGAGAGGAGTCCAGTGGTACCATTTTCAGGTAAGGTTGTAGCCGTTTTCACGTCGATTCAACAATGGCAGTTTTGAGTACTATTCATGCAAAGTTTATTTAGCACGTTTTTGGGATTTTTTTAAGCTTGTAGGTAGCTTGGTGGTGTCCCAAGGAGCCTCGGAGTGCTTCGTTGGACAAATTTGGACG T37-m0346 23 .............((((..(((.....)))...)))).((((((((.((((.......)))).(((....))).....)))...(.((((((...((((.(((((((.........((((((.....))).)))..((((((((((....(((((((.......)))))))....))))))))))..)))))))))))..))))))).....))))). *****************************************************************************************************************************************************************************************GCCTCGGAGTGCTTCGTTGGACA********** T37-m0346-3p 22 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCCAAGGAGCCTCGGAGTGCTT------------------- t0823041 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCTCGGAGTGCTTCGTTGGACA---------- t0193831 5 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTCGGAGTGCTTCGTTGGACA---------- t0058240 14 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGGAGTGCTTCGTTGGACA---------- t0714954 2 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGGAGTGCTTCGTTGGACAA--------- t1762311 1 // novel-mir-447 T37-m0134 scaffold18.0:433237:433381:- 145(nt) -40.20(kcal/mol) CCCATCCCTTTTATTTATATAGTCACGCTTAAGTCATGTCAATATTTTATATTCTTATTATTTTTTATCTTAATATTTCTATAAAAAAATCAATATAAAATGTTAATCTAACTTAACCGTGACCGTACAAAATAAAAAGGGATGG T37-m0134 43 .(((((((((((((((.((..((((((.((((((.(.((.(((((((((((((.......((((((((............))))))))...))))))))))))).)).).)))))).))))))..))..)))).))))))))))) ****************************************************************************************************************TTAACCGTGACCGTACAAAATAA********** T37-m0134-3p 42 -----------------TATAGTCACGCTTAAGTCATGTCA-------------------------------------------------------------------------------------------------------- t2150257 1 -------------------------------------------------------------------------------------------------------------AACTTAACCGTGACCGTACAAAAT------------ t0132912 7 --------------------------------------------------------------------------------------------------------------ACTTAACCGTGACCGTACAA--------------- t3544005 1 --------------------------------------------------------------------------------------------------------------ACTTAACCGTGACCGTACAAAAT------------ t0251805 4 --------------------------------------------------------------------------------------------------------------ACTTAACCGTGACCGTACAAAATA----------- t0407225 3 ---------------------------------------------------------------------------------------------------------------CTTAACCGTGACCGTACAAAA------------- t3493659 1 ---------------------------------------------------------------------------------------------------------------CTTAACCGTGACCGTACAAAATAA---------- t0698295 2 ----------------------------------------------------------------------------------------------------------------TTAACCGTGACCGTACAAAAT------------ t0634941 2 ----------------------------------------------------------------------------------------------------------------TTAACCGTGACCGTACAAAATAA---------- t0037499 20 ----------------------------------------------------------------------------------------------------------------TTAACCGTGACCGTACAAAATAAA--------- t0484345 2 // novel-mir-457 T37-m0148 scaffold197.0:539053:539298:- 246(nt) -67.69(kcal/mol) TGTTGCACTCTGAATGATGGCCTATGACTCCCCAGCTGATTTAGTAGATGAAACCCATGGTATGTCTGAGTCTACATGCCTTGATACTCTTGAACAATTCTGTGACACAATTGTTCAGGTTTACAAAGACAAGTACCTCTGCGAGCCAAATTAAGAATATTTGAATCAGTTCTTTCGCAATGCTGAAGGCCATGGGTTTTCGAGCATGATAGGGTCATTAGACTACATGCATTGAGATTGGAAGAA T37-m0148 33 (.((.((.(((.(((((((.(..(((((((...(((((((((((...((........((((.(((..(((..(((.((.(((..((..(((((((((((.((...)).)))))))))))..))..))).)).))).))).))).))))........))..)))))))))))........((((((((((((...))))))).)))))....)))))))..)....))).)))).))).)).)).). **********TGAATGATGGCCTATGACTCCC********************************************************************************************************************************************************************************************************************** T37-m0148-5p 33 -------CTCTGAATGATGGCCTATGACTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3148178 --------TCTGAATGATGGCCTATGACTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t2306342 ---------CTGAATGATGGCCTATGACTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0353936 ----------TGAATGATGGCCTATGACTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0330658 ----------TGAATGATGGCCTATGACTCCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0032904 -----------GAATGATGGCCTATGACTCCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0604517 // T37-m0269 scaffold34.0:496779:497024:+ 246(nt) -67.69(kcal/mol) TGTTGCACTCTGAATGATGGCCTATGACTCCCCAGCTGATTTAGTAGATGAAACCCATGGTATGTCTGAGTCTACATGCCTTGATACTCTTGAACAATTCTGTGACACAATTGTTCAGGTTTACAAAGACAAGTACCTCTGCGAGCCAAATTAAGAATATTTGAATCAGTTCTTTCGCAATGCTGAAGGCCATGGGTTTTCGAGCATGATAGGGTCATTAGACTACATGCATTGAGATTGGAAGAA T37-m0269 33 (.((.((.(((.(((((((.(..(((((((...(((((((((((...((........((((.(((..(((..(((.((.(((..((..(((((((((((.((...)).)))))))))))..))..))).)).))).))).))).))))........))..)))))))))))........((((((((((((...))))))).)))))....)))))))..)....))).)))).))).)).)).). **********TGAATGATGGCCTATGACTCCC********************************************************************************************************************************************************************************************************************** T37-m0269-5p 33 -------CTCTGAATGATGGCCTATGACTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3148178 --------TCTGAATGATGGCCTATGACTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t2306342 ---------CTGAATGATGGCCTATGACTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0353936 ----------TGAATGATGGCCTATGACTCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0330658 ----------TGAATGATGGCCTATGACTCCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0032904 -----------GAATGATGGCCTATGACTCCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0604517 // novel-mir-476 T37-m0183 scaffold233.0:152195:152413:+ 219(nt) -38.12(kcal/mol) ACGACACGAATGCCAGGTCTAGTCCTAACTTTGGACTTTTGTTTGCAAATTTTGGATTTGTATTTTTAAAATGGGTGTAGAGAAAAATTTATAAATTGAATTAGGTTTGTGAGGGTAGTTTAGGTAGTAAATTTGGATTTAAAGAGATATTGATAGTTTAATTAAAAGTAATATGGGGAAAAGAGTAAGTTGGATGTAGAAAGAGGTTATAAGGGTTGA T37-m0183 96 .((((......(((...((((((((.(((((((((.((((.((((((.((((((((........))))))))...)))))).)))).))))..((((((((((.((((.(......(((((((((.....)))))))))...).)))).....)))))))))).......................))))))))).))))....))).......)))). ******************************************************************************************************************************************************************************************AAGTTGGATGTAGAAAGAGGTTA********** T37-m0183-3p 94 -----------------------------------------------------------------------------------------------------------------------------------------TTTAAAGAGATATTGATAGTTT------------------------------------------------------------ t2550659 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAAGTTGGATGTAGAAAGAGGT------------ t0049801 16 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAAGTTGGATGTAGAAAGAGGTT----------- t0458256 2 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAGTTGGATGTAGAAAGAGGT------------ t3746525 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAGTTGGATGTAGAAAGAGGTT----------- t0049159 16 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTAAGTTGGATGTAGAAAGAGGTTA---------- t0626540 2 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTTGGATGTAGAAAGAGGTT----------- t3361195 1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTGGATGTAGAAAGAGGT------------ t2085023 1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTGGATGTAGAAAGAGGTTA---------- t0015509 44 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTTGGATGTAGAAAGAGGTTAT--------- t0115742 7 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTGGATGTAGAAAGAGGTTA---------- t1739662 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTGGATGTAGAAAGAGGTTATA-------- t0395035 3 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGATGTAGAAAGAGGTTAT--------- t3124787 1 // T37-m0190 scaffold246.0:642401:642670:+ 270(nt) -60.80(kcal/mol) TAAGTGTTTCATGTAGAAGTACACGACGTGTCATTAGAAGCACTTTTAGTTGTCAAAAAACATTTTTAACTCTTTCAAAAGTAATCCCAAAAAAGCTCATAAGAAGCACTTCGACAATTGAGGGCGAATCATTTTGCGGGATTGTTTTGCCTATCCAAAGAGTGAGCTTGGACAAACCCCAATCCAACCAGATAGGTAATCACTCGCCGGTTTTTTTCGACTAATGCTAACTGTTAAAAACGATTCGTAGTACGGATATATATATATATA T37-m0190 12 ...((((...(((((...(((((((((((.....(((.((((...(((((((..(((((((..............(((((.(((((((.......((((...(((....)))......)))).(((((....)))))))))))))))))..........((((((..((((.......))))....(((.....)))..))))))....))))))).)))))))))))..)))......)))..)))).))))...)))))..))))... **********ATGTAGAAGTACACGACGTGTCA********************************************************************************************************************************************************************************************************************************************* T37-m0190-5p 12 --------TCATGTAGAAGTACACGACGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------TCATGTAGAAGTACACGACGTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------TCATGTAGAAGTACACGACGTGTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------CATGTAGAAGTACACGACGTGTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------ATGTAGAAGTACACGACGTGTCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------TGTAGAAGTACACGACGTGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // novel-mir-482 T37-m0199 scaffold251.0:411498:411709:- 212(nt) -61.99(kcal/mol) AGCACGAACAAAGGAGTGGGTCGTATTCATGTTCTCCCTCACATGATCACCTAGATGAGGGTGATGATGAACAGTGCGAAGATCAGCAAAATTCTTATCATCTTTAAGCTGATGTAACCGCTCTCTTATGTCCTTAATTTCATGACCAACTCTCAAGCGGAATGCAACAGGATTAGAGCGGGAAAAGAAACGGCGTACCTTTCTGGTTGTGC T37-m0199 172 .((((((.((((((.(((.(((((.(((...(((((.(((...(((((.......((((((((((((.(((...(((........)))...)))))))))))))))..(((.((((.(((((.......(((...........))).........)))))..)))).))))))))))).)))))..)))))))).))))))).)).)))))) *************************************************************************************************************************************************************************************GAAAAGAAACGGCGTACCTTT********** T37-m0199-3p 165 ------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAACAGGATTAGAGCGGGA----------------------------- t0177909 5 ------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCAACAGGATTAGAGCGGGAA---------------------------- t3478273 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGGAAAAGAAACGGCGT---------------- t3258512 1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAAAGAAACGGCGTACCTTT---------- t0382835 3 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAGAAACGGCGTACCTT----------- t2715402 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAAGAAACGGCGTACCTTT---------- t0006794 91 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGAAACGGCGTACCTT----------- t1568331 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGAAACGGCGTACCTTT---------- t0021505 33 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGAAACGGCGTACCTTTC--------- t0034647 22 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGAAACGGCGTACCTTT---------- t0313918 3 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGAAACGGCGTACCTTTC--------- t0350986 3 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGAAACGGCGTACCTTTCT-------- t0118105 7 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAACGGCGTACCTTTCTGG------ t1128156 1 novel498 T37-m0243 scaffold301.0:287566:287807:+ 242(nt) -66.04(kcal/mol) GCTGCCCTGGTTTTTCACCTTATCAGAAGGTTACTGTTGCACTTCGAATGATGGCCTATGGCTCCCCAGCTGATTCGATGGATGAAACCCATGGTATGTCTGAGTCTACATGCCTTGATACTCTTCAACAATTCTGTGACACAATTGTTCAGGTTCACAAAGACGAGTACCTCCGCGAGCCAAATCAAGAAGATCTAAATCGGTTCTTTTGCAAAGCTGAAGACCATGGGTTTCCGGGCATG T37-m0243 41 ..(((((.((.........((((..((((((.......)).))))..)))).(((((((((.((..(((((..((((.((((.......((.(((((((........))))))).)).(((((.((......((((.((((....))))))))........)).)))))..))))))))......(((((..(((......)))..)))))...)))))..))))))))))).))))))).. *******************************************************************************************************************************************************************************************************************CAAAGCTGAAGACCATGGGTT********** T37-m0243-3p 41 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAGCTGAAGACCATGGG------------ t2914287 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAGCTGAAGACCATGGGTT---------- t0039390 19 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAGCTGAAGACCATGGGTTT--------- t0044035 18 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAGCTGAAGACCATGGGTTTC-------- t2696040 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAGCTGAAGACCATGGGTTT--------- t0742975 2 // novel504 T37-m0249 scaffold308.0:39536:39668:+ 133(nt) -45.70(kcal/mol) TCGTGAATCATATCCGTTCATTGTAAATCATACGGTTTGAATTTATTTTAAATTTCTTTGTTTAAAATTGAACACAAACAATATCTGACGAAAACTGACCGTACGATGTACGATGAATGGACATGATCCACGG T37-m0249 49 .((((.(((((.(((((((((((((.(((.(((((((.(((((((...))))))).((((((....((((........))))....))))))....))))))).))).))))))))))))).))))).)))). ****************************************************************************************************GTACGATGTACGATGAATGGACA********** T37-m0249-3p 49 ---------------------------------------------------------------------------------------------------CGTACGATGTACGATGAATGGACA---------- t0077215 11 ----------------------------------------------------------------------------------------------------GTACGATGTACGATGAATGGACA---------- t0025335 29 ----------------------------------------------------------------------------------------------------GTACGATGTACGATGAATGGACAT--------- t3261488 1 -----------------------------------------------------------------------------------------------------TACGATGTACGATGAATGGA------------ t2808407 1 -----------------------------------------------------------------------------------------------------TACGATGTACGATGAATGGAC----------- t0726182 2 ------------------------------------------------------------------------------------------------------ACGATGTACGATGAATGGACATGA------- t0408153 3 -------------------------------------------------------------------------------------------------------CGATGTACGATGAATGGACATGA------- t2269432 1 -------------------------------------------------------------------------------------------------------CGATGTACGATGAATGGACATGAT------ t3898855 1 // novel509 T37-m0264 scaffold328.0:155365:155484:+ 120(nt) -52.70(kcal/mol) AGAGCATTGTTTGGTAGCCAAGGATGACTTGCCTGCCTCCAATCACATGAATGGCATTGTCGTATGTCTAAAATTCATGTTCGGCTGCCAGGCAGTCTCCTTGGCTAATCTCACAGGCTC T37-m0264 67 .((((.((((..((((((((((((.((((.((((((..((....(((((((((((((......)))))....))))))))..))..).)))))))))))))))))).)))..)))))))) ******************************************************************************************GGCAGTCTCCTTGGCTAATC********** T37-m0264-3p 67 -----------------------------------------------------------------------------------------AGGCAGTCTCCTTGGCTAAT----------- t0071844 11 -----------------------------------------------------------------------------------------AGGCAGTCTCCTTGGCTAATC---------- t0197650 5 ------------------------------------------------------------------------------------------GGCAGTCTCCTTGGCTAAT----------- t0031880 23 ------------------------------------------------------------------------------------------GGCAGTCTCCTTGGCTAATC---------- t0026493 28 // novel516 T37-m0274 scaffold342.0:378778:378874:+ 97(nt) -35.93(kcal/mol) TCCGGGTCGTTGAAATTTGATCCAATGACTACAATTATTATAACATTTAGAAGGGCCCCTTGTTTGTAGCCATTTGATCAAATTTCAACAACCCAAA T37-m0274 31 ...((((.((((((((((((((.((((.((((((..............(.((((...)))).))))))).)))).)))))))))))))).))))... **********TGAAATTTGATCCAATGACTACA**************************************************************** T37-m0274-5p 30 ---------TTGAAATTTGATCCAATGACT------------------------------------------------------------------- t0391754 3 ---------TTGAAATTTGATCCAATGACTACA---------------------------------------------------------------- t3456009 1 ----------TGAAATTTGATCCAATGAC-------------------------------------------------------------------- t0923432 1 ----------TGAAATTTGATCCAATGACTAC----------------------------------------------------------------- t0395338 3 ----------TGAAATTTGATCCAATGACTACA---------------------------------------------------------------- t0084686 10 ----------TGAAATTTGATCCAATGACTACAA--------------------------------------------------------------- t0191992 5 -----------GAAATTTGATCCAATGACTAC----------------------------------------------------------------- t2904713 1 -----------GAAATTTGATCCAATGACTACA---------------------------------------------------------------- t0178035 5 ------------AAATTTGATCCAATGACTACA---------------------------------------------------------------- t3129962 1 --------------ATTTGATCCAATGACTACAA--------------------------------------------------------------- t3945825 1 // novel52 T24-m0057 scaffold1291.0:52980:53266:+ 287(nt) -56.36(kcal/mol) GAAATACCAGTAGATTGTAATACTAAGTGGCTAGTTTTGTTATTTCAAAATTAATAACATATGTAAATCCCCTCGCAGATGCTAAAATCCTTTACTTATCAGTAATTTTGATATAATAAAGAGTGTAGTTAAATACAAATTTATGGACTATATATGAATACCTGTTCACACCTTCATGAGATACTTTTGGTGGTAAAAAACTTCAACCAAGTCTGCCCCAATAATTTGTTAATATTCAATAAAGTCTCACTTGTGTCATTAGTGCTACGGTTTAATAGTGTATTTTT T24-m0057 35 ((((((((..(((((((((.((((((.((((....((((((((.(((((((((.....(((.(((((.......((....))........))))).)))...))))))))).))))))))(((((..((.....))........(((((.(((.((((((....((((........))))......((((.((((....((((.....)))).))))))))...........))))))))).))))))))))..)))))))))).)))))))))...).))))))). **********TAGATTGTAATACTAAGTGGCTA************************************************************************************************************************************************************************************************************************************************************** T24-m0057-5p 35 ----------TAGATTGTAATACTAAGTGGCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------AGATTGTAATACTAAGTGGCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ // T24-m0185 scaffold262.0:313000:313286:+ 287(nt) -52.50(kcal/mol) GAAATACCAGTAGATTGTAATACTAAGTGGCTAGTTCTGTTATTTCCAAATTAATAACATATGTAAATCCCCTCGCAGATGCTAAAATCCTTTACTTATCAGTAATTTTGATATAATAAAGAGTGTAGTTAAATACAAATTTATGGACTATATATGAATACCCGTTCACACCTTCATGAGATACTTTTGGTGGTAAAAAACTTCAACCAAGTCTGCCCAAATAATTTGTTAATATTCAATGAAGTCTCACTTGTGTCATTAGTGCTACGGTTTAATAGTGTATTTTT T24-m0185 35 ((((((((..(((((((((.((((((.((((.........((((..(((((((...((....))..........(((((((((((((..(((((..((((((.....))))))...)))))..((((......))))..((((((((.......(((((....)))))....))))))))....)))))))(((...........)))..)))))).....)))))))..))))..((((((....))).))).)))))))))).)))))))))...).))))))). **********TAGATTGTAATACTAAGTGGCTA************************************************************************************************************************************************************************************************************************************************************** T24-m0185-5p 35 ----------TAGATTGTAATACTAAGTGGCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------AGATTGTAATACTAAGTGGCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ // T37-m0065 scaffold1291.0:52980:53266:+ 287(nt) -56.36(kcal/mol) GAAATACCAGTAGATTGTAATACTAAGTGGCTAGTTTTGTTATTTCAAAATTAATAACATATGTAAATCCCCTCGCAGATGCTAAAATCCTTTACTTATCAGTAATTTTGATATAATAAAGAGTGTAGTTAAATACAAATTTATGGACTATATATGAATACCTGTTCACACCTTCATGAGATACTTTTGGTGGTAAAAAACTTCAACCAAGTCTGCCCCAATAATTTGTTAATATTCAATAAAGTCTCACTTGTGTCATTAGTGCTACGGTTTAATAGTGTATTTTT T37-m0065 15 ((((((((..(((((((((.((((((.((((....((((((((.(((((((((.....(((.(((((.......((....))........))))).)))...))))))))).))))))))(((((..((.....))........(((((.(((.((((((....((((........))))......((((.((((....((((.....)))).))))))))...........))))))))).))))))))))..)))))))))).)))))))))...).))))))). **********TAGATTGTAATACTAAGTGGCTA************************************************************************************************************************************************************************************************************************************************************** T37-m0065-5p 15 ----------TAGATTGTAATACTAAGTGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TAGATTGTAATACTAAGTGGCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ // T37-m0205 scaffold262.0:313000:313286:+ 287(nt) -52.50(kcal/mol) GAAATACCAGTAGATTGTAATACTAAGTGGCTAGTTCTGTTATTTCCAAATTAATAACATATGTAAATCCCCTCGCAGATGCTAAAATCCTTTACTTATCAGTAATTTTGATATAATAAAGAGTGTAGTTAAATACAAATTTATGGACTATATATGAATACCCGTTCACACCTTCATGAGATACTTTTGGTGGTAAAAAACTTCAACCAAGTCTGCCCAAATAATTTGTTAATATTCAATGAAGTCTCACTTGTGTCATTAGTGCTACGGTTTAATAGTGTATTTTT T37-m0205 15 ((((((((..(((((((((.((((((.((((.........((((..(((((((...((....))..........(((((((((((((..(((((..((((((.....))))))...)))))..((((......))))..((((((((.......(((((....)))))....))))))))....)))))))(((...........)))..)))))).....)))))))..))))..((((((....))).))).)))))))))).)))))))))...).))))))). **********TAGATTGTAATACTAAGTGGCTA************************************************************************************************************************************************************************************************************************************************************** T37-m0205-5p 15 ----------TAGATTGTAATACTAAGTGGC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TAGATTGTAATACTAAGTGGCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ // novel526 mireap-plant T37-m0298 scaffold378.0:87556:87720:- 165(nt) -58.31(kcal/mol) AGTCCCTAAGTTTGTTCACCGTCAATCATTTTGGTTATTCCGCAAAAAAATCTCCAATAAATGAAAAAGCAAGTGAAGGGGTTGATTAGACAAAAATAACCTCAATCTAACTAAGATTTTTCACAAAATGATCTAAATGATTGACAGTGGACAAACTCAGGGACC T37-m0298 145 .((((((.(((((((((((.(((((((((((.(((((((..((.........................))..((((((((((((.((......)).))))))).((((.....))))..)))))..))))))).))))))))))).))))))))))).)))))). **************************************************************************************************************************************AAATGATTGACAGTGGACAAA********** T37-m0298-3p 142 ---------------------------------------------------------------------------------------------------------------------------------GATCTAAATGATTGACAGTGGACA------------ t0297906 3 ------------------------------------------------------------------------------------------------------------------------------------CTAAATGATTGACAGTGGACA------------ t1598915 1 -------------------------------------------------------------------------------------------------------------------------------------TAAATGATTGACAGTGGACA------------ t1783431 1 --------------------------------------------------------------------------------------------------------------------------------------AAATGATTGACAGTGGACAA----------- t1951423 1 --------------------------------------------------------------------------------------------------------------------------------------AAATGATTGACAGTGGACAAA---------- t0008314 76 --------------------------------------------------------------------------------------------------------------------------------------AAATGATTGACAGTGGACAAAC--------- t0010924 60 --------------------------------------------------------------------------------------------------------------------------------------AAATGATTGACAGTGGACAAACT-------- t3304611 1 ---------------------------------------------------------------------------------------------------------------------------------------AATGATTGACAGTGGACAAA---------- t2320549 1 ---------------------------------------------------------------------------------------------------------------------------------------AATGATTGACAGTGGACAAAC--------- t1609850 1 // T37-m0299 scaffold378.0:88565:88728:- 164(nt) -64.00(kcal/mol) AATCCCTAAGTTTGTCCACCGTCAATCATTTTGATCATTCTGCAAAAAATCTCCAATAAATGAAAAAGCAAGTGAAGGGGTTGATTAGACAAAAATAACCTCAATCTAACTAAGATTTTTCACAAAATGATCTAAATGATTGACAGTGGACAAACTCAGGGACC T37-m0299 145 ..(((((.(((((((((((.(((((((((((.(((((((.((..((((((((........((......))......(((((((.((......)).)))))))..........))))))))..)).))))))).))))))))))).))))))))))).))))).. *************************************************************************************************************************************AAATGATTGACAGTGGACAAA********** T37-m0299-3p 142 --------------------------------------------------------------------------------------------------------------------------------GATCTAAATGATTGACAGTGGACA------------ t0297906 3 -----------------------------------------------------------------------------------------------------------------------------------CTAAATGATTGACAGTGGACA------------ t1598915 1 ------------------------------------------------------------------------------------------------------------------------------------TAAATGATTGACAGTGGACA------------ t1783431 1 -------------------------------------------------------------------------------------------------------------------------------------AAATGATTGACAGTGGACAA----------- t1951423 1 -------------------------------------------------------------------------------------------------------------------------------------AAATGATTGACAGTGGACAAA---------- t0008314 76 -------------------------------------------------------------------------------------------------------------------------------------AAATGATTGACAGTGGACAAAC--------- t0010924 60 -------------------------------------------------------------------------------------------------------------------------------------AAATGATTGACAGTGGACAAACT-------- t3304611 1 --------------------------------------------------------------------------------------------------------------------------------------AATGATTGACAGTGGACAAA---------- t2320549 1 --------------------------------------------------------------------------------------------------------------------------------------AATGATTGACAGTGGACAAAC--------- t1609850 1 // novel531 T37-m0306 scaffold39.0:285883:285973:+ 91(nt) -42.40(kcal/mol) CATGGCTGTCGCCGGTCTCTTTGTAGCCTGGTGGCTTCATGTTCCACATGAGGTTCACCGGGTCAACAGTTCGACTGGCACCACAGGAAAC T37-m0306 41 .....((((.(((((((...((((.((((((((((((((((.....))))))).)))))))))..))))...)))))))...))))..... **********************************************************CGGGTCAACAGTTCGACTGGCAC********** T37-m0306-3p 40 --------------------------------------------------------ACCGGGTCAACAGTTCGACTGGCAC---------- t2065731 1 ---------------------------------------------------------CCGGGTCAACAGTTCGACTGGC------------ t0556446 2 ----------------------------------------------------------CGGGTCAACAGTTCGACTGGC------------ t3710573 1 ----------------------------------------------------------CGGGTCAACAGTTCGACTGGCA----------- t0258976 4 ----------------------------------------------------------CGGGTCAACAGTTCGACTGGCAC---------- t0053589 15 -----------------------------------------------------------GGGTCAACAGTTCGACTGGCA----------- t0529690 2 -----------------------------------------------------------GGGTCAACAGTTCGACTGGCAC---------- t0059314 13 ------------------------------------------------------------GGTCAACAGTTCGACTGGCAC---------- t0768921 2 --------------------------------------------------------------TCAACAGTTCGACTGGCACC--------- t3601595 1 // novel533 T37-m0314 scaffold4.0:1838849:1839052:+ 204(nt) -66.60(kcal/mol) TAAATGAGAACAACTTAGGACTCGTTGGGAAGTGCTTTTATATGATTGAAAACGTTTTTAGAAAAAATGTTTTTAAATGACTTAAGTGTTTTTGGAGGATTAACTTGTATTTTTATGAATGATTGGTTCCAAAAACATTTTATCTAAAAACACTTTCAATCATTTAAATACATTTTCCAAACGAGTCCTTATGCTTCAGCCATA T37-m0314 27 .......(((((....((((((((((((((((((..((((.((((((((((..(((((((((......(((.......)))..(((((((((((((((((((..(..((....))..).)))))..))))))))))))))..)))))))))..)))))))))).))))..)))))))).))))))))))..)).)))....... **********CAACTTAGGACTCGTTGGGAAGT*************************************************************************************************************************************************************************** T37-m0314-5p 26 -----GAGAACAACTTAGGACTCGTTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1151787 1 ---------ACAACTTAGGACTCGTTGGGAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0295058 3 ----------CAACTTAGGACTCGTTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1914432 1 ----------CAACTTAGGACTCGTTGGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t1158276 1 ----------CAACTTAGGACTCGTTGGGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0130765 7 ----------CAACTTAGGACTCGTTGGGAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0150419 6 ----------CAACTTAGGACTCGTTGGGAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0102361 8 novel543 T37-m0341 scaffold44.1:311402:311533:+ 132(nt) -25.70(kcal/mol) TTTATACATTAGTCCTTAGTCAAAGTTACATGCATTTTCTTATCGAGAGCAACTTTGATATGTAACGAGTTTATCATCTCATGATATTCTAGTTTAATAATGCAATGACATGTAGAAGGACAATTATACGTA T37-m0341 25 ...........((((((...((..((((..((((((....(((((((......)))))))...(((.((..((((((...))))))..)).)))....)))))).)))).))...))))))........... ***************************************************************************************************ATGCAATGACATGTAGAAGGACA********** T37-m0341-3p 24 -------------------------------------------------------------------------------------ATTCTAGTTTAATAATGCAATGAC----------------------- t1335235 1 --------------------------------------------------------------------------------------------------AATGCAATGACATGTAGAAGGACA---------- t2734174 1 ---------------------------------------------------------------------------------------------------ATGCAATGACATGTAGAAGGACA---------- t0041195 19 ---------------------------------------------------------------------------------------------------ATGCAATGACATGTAGAAGGACAA--------- t0293660 3 ---------------------------------------------------------------------------------------------------ATGCAATGACATGTAGAAGGACAAT-------- t1872760 1 novel560 T37-m0382 scaffold533.0:145177:145280:+ 104(nt) -38.54(kcal/mol) CGGGCCTTTAAAAATTTGATTCAACGGCTAAAAATTATTATAGCTTTAAAAGTTTTTACTAACTTTTCTGTTTTTAGTCATTAGATCAAATTTTAAAGGCCCGG T37-m0382 23 (((((((((((((.((((((..((.((((((((((............(((((((......)))))))..)))))))))).))..))))))))))))))))))). **********AAAATTTGATTCAACGGCTAA************************************************************************* T37-m0382-5p 22 -------TTAAAAATTTGATTCAACGGCTAA------------------------------------------------------------------------- t3627020 1 --------TAAAAATTTGATTCAACGGCT--------------------------------------------------------------------------- t1532546 1 ---------AAAAATTTGATTCAACGGCTAAA------------------------------------------------------------------------ t1940570 1 ---------AAAAATTTGATTCAACGGCTAAAA----------------------------------------------------------------------- t0592241 2 ----------AAAATTTGATTCAACGGCTA-------------------------------------------------------------------------- t3400577 1 ----------AAAATTTGATTCAACGGCTAA------------------------------------------------------------------------- t0192454 5 ----------AAAATTTGATTCAACGGCTAAAA----------------------------------------------------------------------- t1648125 1 ----------AAAATTTGATTCAACGGCTAAAAA---------------------------------------------------------------------- t0266799 4 ------------AATTTGATTCAACGGCTAAAAAT--------------------------------------------------------------------- t0251558 4 ------------AATTTGATTCAACGGCTAAAAATT-------------------------------------------------------------------- t3455953 1 -------------ATTTGATTCAACGGCTAAA------------------------------------------------------------------------ t3625382 1 --------------TTTGATTCAACGGCTAAAAAT--------------------------------------------------------------------- t3893220 1 // novel573 T37-m0408 scaffold604.0:195074:195200:- 127(nt) -45.70(kcal/mol) CGTCCTTCGGTTGAATGCGGGGCGTGCCAACTCGTCCGCCGAGCTCGGCCGAGGAGTAAAATTTGATGATGTCGCGTTGAGCGCGCTGTCGACTTCTGTATCTTGCGATTGCGACCAAGGAAGGAAC T37-m0408 26 ..(((((((((((((((((((..((((..((((.((.((((....)))).)).)))).........(((((.((((.....)))).)))))......))))))))).))).)))))...)))))).. **********************************************************************************************TCTGTATCTTGCGATTGCGACCA********** T37-m0408-3p 25 --------------------------------------------------------------------------------------TGTCGACTTCTGTATCTTGCGATT----------------- t2506832 1 ---------------------------------------------------------------------------------------------TTCTGTATCTTGCGATTGCGACCA---------- t3105646 1 ----------------------------------------------------------------------------------------------TCTGTATCTTGCGATTGCGACCA---------- t0032065 23 ----------------------------------------------------------------------------------------------TCTGTATCTTGCGATTGCGACCAA--------- t2011358 1 // novel579 T37-m0420 scaffold63.0:363770:363967:+ 198(nt) -62.90(kcal/mol) TGGTTCCTGAGTGTGTCCACTATGTATCATTTTGGTGTGAAAAATTTCAGTTAAATAAGAATAAAATAACAAAAATACTCTTAATTTTTGTCGAATCATTTTGGCCCATTGTGGGTACTTTTGTCATTTTAATCTTTATTTAACAAATATTTTCTATGAAAGAACCAAAATGATTGATGGTAGACAAACACAGGGATC T37-m0420 41 .((((((((.((.((((.(((((..(((((((((((..(((((((((..(((((((((((.((((((.((((((.(((((.((((....((((((....))))))..)))).))))).)))))).)))))).)).))))))))))))).))))).........)))))))))))..))))).)))).)).)))))))) *********************************************************************************************************************************************************************CAAAATGATTGATGGTAGACAAA********** T37-m0420-3p 41 -------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCAAAATGATTGATGGTAGACAA----------- t1998612 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAAAATGATTGATGGTAGACAAA---------- t0529041 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAATGATTGATGGTAGAC------------- t3303023 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAATGATTGATGGTAGACA------------ t0178451 5 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAATGATTGATGGTAGACAA----------- t0175532 5 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAATGATTGATGGTAGACAAA---------- t0134103 7 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAAATGATTGATGGTAGACAAAC--------- t0156505 6 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATGATTGATGGTAGACA------------ t0750664 2 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATGATTGATGGTAGACAA----------- t0117976 7 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAATGATTGATGGTAGACAAAC--------- t0518397 2 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATGATTGATGGTAGACAAAC--------- t2986403 1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGATTGATGGTAGACAAA---------- t0758118 2 // novel585 T37-m0431 scaffold66.0:222014:222100:- 87(nt) -27.70(kcal/mol) TGCTAAAAGTAAAATATCGTGCTTATTTTAAAAGCAATGGTTTCCAGACAACAGCTTTTAAAAGCAGCATGTAGGTTGCTTTTAAAA T37-m0431 32 ...(((((((((..((.((((((..((((((((((....(((....)))....))))))))))..))))))))..)))))))))... ******************************************************CTTTTAAAAGCAGCATGTAGGTT********** T37-m0431-3p 32 ----------------------------------------------------AGCTTTTAAAAGCAGCATGTAGGT----------- t0718390 2 ------------------------------------------------------CTTTTAAAAGCAGCATGTAGG------------ t0226272 4 ------------------------------------------------------CTTTTAAAAGCAGCATGTAGGT----------- t0243337 4 ------------------------------------------------------CTTTTAAAAGCAGCATGTAGGTT---------- t0075018 11 -------------------------------------------------------TTTTAAAAGCAGCATGTAGGT----------- t0141215 6 --------------------------------------------------------TTTAAAAGCAGCATGTAGGT----------- t3944787 1 --------------------------------------------------------TTTAAAAGCAGCATGTAGGTT---------- t0401791 3 ---------------------------------------------------------TTAAAAGCAGCATGTAGGTT---------- t1920292 1 // novel586 T37-m0432 scaffold66.0:332854:332980:- 127(nt) -33.00(kcal/mol) AAAAATTATGTGAAATAAGGATCAAAATGACAAAATTACCCTCAATATAATAAACAATAAACCAAAATGATTTGACATAAATTAAGGGTATTTTTATCATTTTGTCCTTATTTTATGGAGAATTTTC T37-m0432 25 .((((((.(((((((((((((.((((((((.((((.((((((...(((........)))...((((....))))..........)))))).)))).)))))))))))))))))))))...)))))). **********TGAAATAAGGATCAAAATGACA*********************************************************************************************** T37-m0432-5p 24 ----------TGAAATAAGGATCAAAATGAC------------------------------------------------------------------------------------------------ t3275473 1 ----------TGAAATAAGGATCAAAATGACA----------------------------------------------------------------------------------------------- t0042255 18 ------------AAATAAGGATCAAAATGACAAAAT------------------------------------------------------------------------------------------- t0347364 3 -------------AATAAGGATCAAAATGACAAAA-------------------------------------------------------------------------------------------- t0555335 2 ---------------TAAGGATCAAAATGACAAAATTA----------------------------------------------------------------------------------------- t2112572 1 // novel598 T37-m0455 scaffold718.0:213274:213563:+ 290(nt) -75.30(kcal/mol) CAAGTGATTTGAGTTTTCAGTGATTGTGAAAGGGATTATGATGATAATATGATTATTAATGTTTAAAATCTGTATCTTTCTTACTTACCTTATCTATATTATGATTATTAATTATTATGGTTGCTGGTCAAGTTGTTGGTTGCTGTTTAAATCGATTTCTTATTATTTAGATGGATGGATTGTTGGTGGTTCAGGATGGATTTGGATCCCATCCGGATCCAAACTGTGAGGATTTTAGGGATTCTCACATATTAGTCATTCATCGTGCATCGTGCGGTCAAAAATTATTT T37-m0455 38 .(((((((((.(((..((((..(((.(((.((.((((((((((((...((((((((.(((((.(((.....(((.......))).....)))...)))))))))))))..)))))))))))).))..))))))..))))..)))((((((((.(((.....))))))))))).....(((((((((((...((.(((((((((((((((.....))))))))..((((((((((.....))))))))))........))))))).))))))).))))))..))))))))) *****************************************************************************************************************************************************************************************************************************************************************ATTCATCGTGCATCGTGCGGTCA********** T37-m0455-3p 37 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGGATTCTCACATATTAG --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // novel6 T24-m0006 scaffold1.0:3495733:3495907:- 175(nt) -43.23(kcal/mol) TGGATTGAATAAATTAATGAAGATCAAAGGACAAAAGTTAACAGGGATGTGTGAAAGATAAAAAATGTACGTGAATAATACCACCCCAAACATGTAATGATTTTCATATTCCAGTTTTTTCTTATGCACTTCTCTTGTTTTTGTTATTTGGTTCTTTCTTTATTTATTCAATCTT T24-m0006 227 .(((((((((((((.((.((((((((((.(((((((....(((((((.(((((.((((.((((....((((((.................))))))(((.....))).......)))).)))).))))).)).)))))))))))).))))).))))).)).))))))))))))). **********AAATTAATGAAGATCAAAGGACA********************************************************************************************************************************************** T24-m0006-5p 224 -------AATAAATTAATGAAGATCAAAGGA------------------------------------------------------------------------------------------------------------------------------------------------ t0198982 7 --------ATAAATTAATGAAGATCAAAGGA------------------------------------------------------------------------------------------------------------------------------------------------ t1316878 1 --------ATAAATTAATGAAGATCAAAGGAC----------------------------------------------------------------------------------------------------------------------------------------------- t0014066 62 --------ATAAATTAATGAAGATCAAAGGACA---------------------------------------------------------------------------------------------------------------------------------------------- t0036398 29 ---------TAAATTAATGAAGATCAAAGGACA---------------------------------------------------------------------------------------------------------------------------------------------- t1051450 2 ----------AAATTAATGAAGATCAAAGGACA---------------------------------------------------------------------------------------------------------------------------------------------- t0006165 119 ----------AAATTAATGAAGATCAAAGGACAA--------------------------------------------------------------------------------------------------------------------------------------------- t2604075 1 -----------AATTAATGAAGATCAAAGGACA---------------------------------------------------------------------------------------------------------------------------------------------- t0911156 2 ------------ATTAATGAAGATCAAAGGACA---------------------------------------------------------------------------------------------------------------------------------------------- t3891142 1 -----------------------------------AGTTAACAGGGATGTGTGAAAGATA------------------------------------------------------------------------------------------------------------------- t3716827 1 ---------------------------------------AACAGGGATGTGTGAAAGATAAAA---------------------------------------------------------------------------------------------------------------- t4820130 1 ----------------------------------------ACAGGGATGTGTGAAAGATAAAAA--------------------------------------------------------------------------------------------------------------- t5278187 1 // T37-m0009 scaffold1.0:3495733:3495907:- 175(nt) -43.23(kcal/mol) TGGATTGAATAAATTAATGAAGATCAAAGGACAAAAGTTAACAGGGATGTGTGAAAGATAAAAAATGTACGTGAATAATACCACCCCAAACATGTAATGATTTTCATATTCCAGTTTTTTCTTATGCACTTCTCTTGTTTTTGTTATTTGGTTCTTTCTTTATTTATTCAATCTT T37-m0009 85 .(((((((((((((.((.((((((((((.(((((((....(((((((.(((((.((((.((((....((((((.................))))))(((.....))).......)))).)))).))))).)).)))))))))))).))))).))))).)).))))))))))))). **********AAATTAATGAAGATCAAAGGACA********************************************************************************************************************************************** T37-m0009-5p 82 ------GAATAAATTAATGAAGATCAAAGG------------------------------------------------------------------------------------------------------------------------------------------------- t0625361 2 -------AATAAATTAATGAAGATCAAAGGA------------------------------------------------------------------------------------------------------------------------------------------------ t1034277 1 --------ATAAATTAATGAAGATCAAAGGAC----------------------------------------------------------------------------------------------------------------------------------------------- t0033355 22 --------ATAAATTAATGAAGATCAAAGGACA---------------------------------------------------------------------------------------------------------------------------------------------- t0143023 6 ----------AAATTAATGAAGATCAAAGGACA---------------------------------------------------------------------------------------------------------------------------------------------- t0013457 50 ------------ATTAATGAAGATCAAAGGACA---------------------------------------------------------------------------------------------------------------------------------------------- t1555097 1 -------------TTAATGAAGATCAAAGGACA---------------------------------------------------------------------------------------------------------------------------------------------- t0943738 1 -------------TTAATGAAGATCAAAGGACAA--------------------------------------------------------------------------------------------------------------------------------------------- t1879355 1 -----------------------------------AGTTAACAGGGATGTGTGAAAGAT-------------------------------------------------------------------------------------------------------------------- t2783682 1 // novel601 T37-m0465 scaffold76.0:66058:66153:+ 96(nt) -72.10(kcal/mol) CTTCACTTTGGCCAGGATTGGGTTCAGGTACTCGCCTTTATTAATGGCATTATCAATAAAGGCGAGTACATGAACCCAATCCTGGCCAAAGTGAAC T37-m0465 26 .(((((((((((((((((((((((((.(((((((((((((((.(((....))).))))))))))))))).))))))))))))))))))))))))). **********GCCAGGATTGGGTTCAGGTAC***************************************************************** T37-m0465-5p 26 -------TTGGCCAGGATTGGGTTCAGGTA------------------------------------------------------------------ t0830060 1 ---------GGCCAGGATTGGGTTCAGGTA------------------------------------------------------------------ t0094149 9 ----------GCCAGGATTGGGTTCAGGTA------------------------------------------------------------------ t3810488 1 ----------GCCAGGATTGGGTTCAGGTAC----------------------------------------------------------------- t0064571 13 -----------CCAGGATTGGGTTCAGGTA------------------------------------------------------------------ t0571901 2 // novel603 T37-m0470 scaffold779.0:96088:96313:+ 226(nt) -47.20(kcal/mol) GGGAGAGTTTTTGGAAGTTAGTCACGGCTTAAGGGGAAGAAAATTGGGATAATGTTGCGGCTGCTTGTATGAATGAATATATGGAATTAGGGTGAATGATTATAGGTTTTGGAATTGAATAATGGGATGGATGTGTGTGACGGCTTGGGAAGTGGCACGGGACTGTATGATGGCTGCGGCAGATTGTTATTTTATGGGATGGTGGCTCGGTTTTGGGGGGCTGCTG T37-m0470 68 ((.((..((((..(((.(.((((((.(((((........(((((.(.(((..(((((((((((((((((...((..((.((......))..))..))...)))))))...................((((.(.(((((.((..(....)..)).))))).).)))).....)))))))))).))).).))))).)))).).)))))).).)))..)))).)).)). **********TTGGAAGTTAGTCACGGCTTAA************************************************************************************************************************************************************************************************** T37-m0470-5p 66 -------TTTTTGGAAGTTAGTCACGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t3793020 1 --------TTTTGGAAGTTAGTCACGGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2382549 1 ---------TTTGGAAGTTAGTCACGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t3972594 1 ---------TTTGGAAGTTAGTCACGGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3550060 1 ---------TTTGGAAGTTAGTCACGGCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3595349 1 ---------TTTGGAAGTTAGTCACGGCTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0028486 26 ---------TTTGGAAGTTAGTCACGGCTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0189985 5 ----------TTGGAAGTTAGTCACGGCTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0026131 28 -----------TGGAAGTTAGTCACGGCTTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0852712 1 -----------TGGAAGTTAGTCACGGCTTAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1021340 1 -------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCACGGGACTGTATGATGGCT--------------------------------------------------- t1429426 1 ------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGGACTGTATGATGGCTGCGGC---------------------------------------------- t2176223 1 // novel69 T24-m0076 scaffold144.0:774926:775122:- 197(nt) -78.90(kcal/mol) GCTTTTGAGGGGAATGTTGTCTGGCTCGAGGACACTTTCCTTGATCTATAATCTCTGGATCAACAACCGTTATATACCTATACATATATCTATATATGTGTATGTGTTTGTATATGTTGTGTGTATCATCTGCATACATAGATGATCAGGTTAAGTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTCATGGCT T24-m0076 753 (((.(((.((((((((..((((((..(((.((((((...((((((((..........(((((.(......(((((((..((((((((((........))))))))))..))))))).((((((((.....))))))))..).))))))))))))).)))))).)))..))))))..)))))))).))).....))). **********GGAATGTTGTCTGGCTCGAGG********************************************************************************************************************************************************************** T24-m0076-5p 751 ---TTTGAGGGGAATGTTGTCTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2521880 1 -------AGGGGAATGTTGTCTGGCTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2260767 1 ---------GGGAATGTTGTCTGGCTCGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2332562 1 ----------GGAATGTTGTCTGGCTCGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0291227 5 ----------GGAATGTTGTCTGGCTCGAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0000622 699 ----------GGAATGTTGTCTGGCTCGAGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0150887 9 ----------GGAATGTTGTCTGGCTCGAGGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2806349 1 ----------GGAATGTTGTCTGGCTCGAGGACA------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1133911 2 -----------GAATGTTGTCTGGCTCGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2010398 1 -----------GAATGTTGTCTGGCTCGAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0303295 5 -----------GAATGTTGTCTGGCTCGAGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0040507 26 -----------GAATGTTGTCTGGCTCGAGGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t4529118 1 -------------------------------------------------------------------------------------------------------------------------------------------------------TAAGTAGTGTCGTCGGACCAGGCT---------------------- t4305599 1 // T24-m0139 scaffold200.0:628639:628809:- 171(nt) -68.82(kcal/mol) TTTTTTGAGGGGAATGTTGTCTGGCTCGAGGCCTCTAGCTAGATCTATGATCTCCATCTCAATTGGTGACAATTTTAACCACCAATCTTAAAAGTTTTACAGTACCAGTTGAGAAAGATCATTGATTCTATGTTTAGCGACCTCGGACCAGGCTTCATTCCCCCCAATTAC T24-m0139 843 ....(((.((((((((..((((((..(((((.(.(((((((((((.(((((((...((((((((((((....((((((.........)))))).........)))))))))))).))))))).)).)))).).)))).).)))))..))))))..)))))))).))).... **********GGAATGTTGTCTGGCTCGAGG******************************************************************************************************************************************** T24-m0139-5p 842 ---TTTGAGGGGAATGTTGTCTGG--------------------------------------------------------------------------------------------------------------------------------------------------- t2521880 1 -------AGGGGAATGTTGTCTGGCTC------------------------------------------------------------------------------------------------------------------------------------------------ t2260767 1 ---------GGGAATGTTGTCTGGCTCGAG--------------------------------------------------------------------------------------------------------------------------------------------- t2332562 1 ----------GGAATGTTGTCTGGCTCGAG--------------------------------------------------------------------------------------------------------------------------------------------- t0291227 5 ----------GGAATGTTGTCTGGCTCGAGG-------------------------------------------------------------------------------------------------------------------------------------------- t0000622 699 ----------GGAATGTTGTCTGGCTCGAGGC------------------------------------------------------------------------------------------------------------------------------------------- t0024867 40 ----------GGAATGTTGTCTGGCTCGAGGCCT----------------------------------------------------------------------------------------------------------------------------------------- t2558818 1 -----------GAATGTTGTCTGGCTCGAG--------------------------------------------------------------------------------------------------------------------------------------------- t2010398 1 -----------GAATGTTGTCTGGCTCGAGG-------------------------------------------------------------------------------------------------------------------------------------------- t0303295 5 -----------GAATGTTGTCTGGCTCGAGGC------------------------------------------------------------------------------------------------------------------------------------------- t0010202 80 -----------GAATGTTGTCTGGCTCGAGGCC------------------------------------------------------------------------------------------------------------------------------------------ t0185655 7 ------------AATGTTGTCTGGCTCGAGGCC------------------------------------------------------------------------------------------------------------------------------------------ t3709487 1 -------------ATGTTGTCTGGCTCGAGGCCT----------------------------------------------------------------------------------------------------------------------------------------- t1617270 1 // T24-m0201 scaffold275.0:393002:393190:+ 189(nt) -72.20(kcal/mol) GCTTTTGAGGGGAATGTTGTCTGGCTCGAGGACTCTTTTCATATTGATCTATAATCCCCTAGATCAACAACCTATATATATATATATCTGTATGTGTATGTATATGTTGCGTTTACCAACTGCATACACAGAGATGATCAGGTGAATTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTTATGGCT T24-m0201 750 (((.(((.((((((((..((((((..(((.(((.((.(((((.((((((((........)))))))).................(((((...((((((((((...((((.(....))))))))))))))).))))).....)))))..)).))).)))..))))))..)))))))).))).....))). **********GGAATGTTGTCTGGCTCGAGG************************************************************************************************************************************************************** T24-m0201-5p 749 ---TTTGAGGGGAATGTTGTCTGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2521880 1 -------AGGGGAATGTTGTCTGGCTC------------------------------------------------------------------------------------------------------------------------------------------------------------------ t2260767 1 ---------GGGAATGTTGTCTGGCTCGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------- t2332562 1 ----------GGAATGTTGTCTGGCTCGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0291227 5 ----------GGAATGTTGTCTGGCTCGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------- t0000622 699 ----------GGAATGTTGTCTGGCTCGAGGA------------------------------------------------------------------------------------------------------------------------------------------------------------- t0150887 9 ----------GGAATGTTGTCTGGCTCGAGGAC------------------------------------------------------------------------------------------------------------------------------------------------------------ t2806349 1 -----------GAATGTTGTCTGGCTCGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------- t2010398 1 -----------GAATGTTGTCTGGCTCGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------- t0303295 5 -----------GAATGTTGTCTGGCTCGAGGA------------------------------------------------------------------------------------------------------------------------------------------------------------- t0040507 26 -----------GAATGTTGTCTGGCTCGAGGAC------------------------------------------------------------------------------------------------------------------------------------------------------------ t4529118 1 // T24-m0408 scaffold67.0:1032896:1033067:+ 172(nt) -67.79(kcal/mol) TTTTTTGAGGGGAATGTTGTCTGGCTCGAGGCCTCTTAACTAGATCTATGATCTTCATCTCAATTGGTGACAATTTTATCCACCAATCTTAAAAAAATTACAGTCCCAGTTGAGAAAGATCATTGATTCTACGTTTAGTGACGTCGGACCAGGCTTCATTCCCCCCAATTAC T24-m0408 843 ....(((.((((((((..((((((..(((.(.(.((.(((((((((.((((((((..((((((((((.(((((((((................))))))...))))))))))))))))))))).)).)))).))).)).).).)))..))))))..)))))))).))).... **********GGAATGTTGTCTGGCTCGAGG********************************************************************************************************************************************* T24-m0408-5p 842 ---TTTGAGGGGAATGTTGTCTGG---------------------------------------------------------------------------------------------------------------------------------------------------- t2521880 1 -------AGGGGAATGTTGTCTGGCTC------------------------------------------------------------------------------------------------------------------------------------------------- t2260767 1 ---------GGGAATGTTGTCTGGCTCGAG---------------------------------------------------------------------------------------------------------------------------------------------- t2332562 1 ----------GGAATGTTGTCTGGCTCGAG---------------------------------------------------------------------------------------------------------------------------------------------- t0291227 5 ----------GGAATGTTGTCTGGCTCGAGG--------------------------------------------------------------------------------------------------------------------------------------------- t0000622 699 ----------GGAATGTTGTCTGGCTCGAGGC-------------------------------------------------------------------------------------------------------------------------------------------- t0024867 40 ----------GGAATGTTGTCTGGCTCGAGGCCT------------------------------------------------------------------------------------------------------------------------------------------ t2558818 1 -----------GAATGTTGTCTGGCTCGAG---------------------------------------------------------------------------------------------------------------------------------------------- t2010398 1 -----------GAATGTTGTCTGGCTCGAGG--------------------------------------------------------------------------------------------------------------------------------------------- t0303295 5 -----------GAATGTTGTCTGGCTCGAGGC-------------------------------------------------------------------------------------------------------------------------------------------- t0010202 80 -----------GAATGTTGTCTGGCTCGAGGCC------------------------------------------------------------------------------------------------------------------------------------------- t0185655 7 ------------AATGTTGTCTGGCTCGAGGCC------------------------------------------------------------------------------------------------------------------------------------------- t3709487 1 -------------ATGTTGTCTGGCTCGAGGCCT------------------------------------------------------------------------------------------------------------------------------------------ t1617270 1 // T24-m0432 scaffold75.0:598615:598785:- 171(nt) -65.04(kcal/mol) TTTTTTGAGGGGAATGTTGTCTGGCTCGAGGCCTCTAGTTAGATCTATGATCTCCATCTCAATTGGTGACAATTTTAACCACCAATCTTAAAAATTTTACAGTACCAGTTGAGAAAGATGATTGTTTCTATGTTTAGCGACCTCGGACCAGGCTTCATTCCCCCCAATTAC T24-m0432 843 ....(((.((((((((..((((((..(((((.(.((((.((((...(..(((((..((((((((((((..((((((..............))))))......))))))))))))..)).)))..).))))...)))).).)))))..))))))..)))))))).))).... **********GGAATGTTGTCTGGCTCGAGG******************************************************************************************************************************************** T24-m0432-5p 842 ---TTTGAGGGGAATGTTGTCTGG--------------------------------------------------------------------------------------------------------------------------------------------------- t2521880 1 -------AGGGGAATGTTGTCTGGCTC------------------------------------------------------------------------------------------------------------------------------------------------ t2260767 1 ---------GGGAATGTTGTCTGGCTCGAG--------------------------------------------------------------------------------------------------------------------------------------------- t2332562 1 ----------GGAATGTTGTCTGGCTCGAG--------------------------------------------------------------------------------------------------------------------------------------------- t0291227 5 ----------GGAATGTTGTCTGGCTCGAGG-------------------------------------------------------------------------------------------------------------------------------------------- t0000622 699 ----------GGAATGTTGTCTGGCTCGAGGC------------------------------------------------------------------------------------------------------------------------------------------- t0024867 40 ----------GGAATGTTGTCTGGCTCGAGGCCT----------------------------------------------------------------------------------------------------------------------------------------- t2558818 1 -----------GAATGTTGTCTGGCTCGAG--------------------------------------------------------------------------------------------------------------------------------------------- t2010398 1 -----------GAATGTTGTCTGGCTCGAGG-------------------------------------------------------------------------------------------------------------------------------------------- t0303295 5 -----------GAATGTTGTCTGGCTCGAGGC------------------------------------------------------------------------------------------------------------------------------------------- t0010202 80 -----------GAATGTTGTCTGGCTCGAGGCC------------------------------------------------------------------------------------------------------------------------------------------ t0185655 7 ------------AATGTTGTCTGGCTCGAGGCC------------------------------------------------------------------------------------------------------------------------------------------ t3709487 1 -------------ATGTTGTCTGGCTCGAGGCCT----------------------------------------------------------------------------------------------------------------------------------------- t1617270 1 // T37-m0084 scaffold144.0:774926:775122:- 197(nt) -78.90(kcal/mol) GCTTTTGAGGGGAATGTTGTCTGGCTCGAGGACACTTTCCTTGATCTATAATCTCTGGATCAACAACCGTTATATACCTATACATATATCTATATATGTGTATGTGTTTGTATATGTTGTGTGTATCATCTGCATACATAGATGATCAGGTTAAGTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTCATGGCT T37-m0084 298 (((.(((.((((((((..((((((..(((.((((((...((((((((..........(((((.(......(((((((..((((((((((........))))))))))..))))))).((((((((.....))))))))..).))))))))))))).)))))).)))..))))))..)))))))).))).....))). **********GGAATGTTGTCTGGCTCGAGG********************************************************************************************************************************************************************** T37-m0084-5p 298 -------AGGGGAATGTTGTCTGGCTCGAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1480437 1 ----------GGAATGTTGTCTGGCTCGAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3677723 1 ----------GGAATGTTGTCTGGCTCGAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0001805 286 ----------GGAATGTTGTCTGGCTCGAGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0578448 2 ----------GGAATGTTGTCTGGCTCGAGGAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0706986 2 -----------GAATGTTGTCTGGCTCGAGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0171280 5 ------------AATGTTGTCTGGCTCGAGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3737794 1 // T37-m0156 scaffold200.0:628639:628809:- 171(nt) -68.82(kcal/mol) TTTTTTGAGGGGAATGTTGTCTGGCTCGAGGCCTCTAGCTAGATCTATGATCTCCATCTCAATTGGTGACAATTTTAACCACCAATCTTAAAAGTTTTACAGTACCAGTTGAGAAAGATCATTGATTCTATGTTTAGCGACCTCGGACCAGGCTTCATTCCCCCCAATTAC T37-m0156 373 ....(((.((((((((..((((((..(((((.(.(((((((((((.(((((((...((((((((((((....((((((.........)))))).........)))))))))))).))))))).)).)))).).)))).).)))))..))))))..)))))))).))).... **********GGAATGTTGTCTGGCTCGAGG******************************************************************************************************************************************** T37-m0156-5p 372 -------AGGGGAATGTTGTCTGGCTCGAGG-------------------------------------------------------------------------------------------------------------------------------------------- t1480437 1 ----------GGAATGTTGTCTGGCTCGAG--------------------------------------------------------------------------------------------------------------------------------------------- t3677723 1 ----------GGAATGTTGTCTGGCTCGAGG-------------------------------------------------------------------------------------------------------------------------------------------- t0001805 286 ----------GGAATGTTGTCTGGCTCGAGGC------------------------------------------------------------------------------------------------------------------------------------------- t0054284 15 -----------GAATGTTGTCTGGCTCGAGGC------------------------------------------------------------------------------------------------------------------------------------------- t0010009 65 -----------GAATGTTGTCTGGCTCGAGGCC------------------------------------------------------------------------------------------------------------------------------------------ t0315898 3 ------------AATGTTGTCTGGCTCGAGG-------------------------------------------------------------------------------------------------------------------------------------------- t3737794 1 ---------------------------------------------------------------------------------------------------------------------------------------AGCGACCTCGGACCAGGCTT---------------- t1623052 1 // T37-m0218 scaffold275.0:393002:393190:+ 189(nt) -72.20(kcal/mol) GCTTTTGAGGGGAATGTTGTCTGGCTCGAGGACTCTTTTCATATTGATCTATAATCCCCTAGATCAACAACCTATATATATATATATCTGTATGTGTATGTATATGTTGCGTTTACCAACTGCATACACAGAGATGATCAGGTGAATTAGTGTCGTCGGACCAGGCTTCATTCCCCCCAATTTATGGCT T37-m0218 298 (((.(((.((((((((..((((((..(((.(((.((.(((((.((((((((........)))))))).................(((((...((((((((((...((((.(....))))))))))))))).))))).....)))))..)).))).)))..))))))..)))))))).))).....))). **********GGAATGTTGTCTGGCTCGAGG************************************************************************************************************************************************************** T37-m0218-5p 298 -------AGGGGAATGTTGTCTGGCTCGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------- t1480437 1 ----------GGAATGTTGTCTGGCTCGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------- t3677723 1 ----------GGAATGTTGTCTGGCTCGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------- t0001805 286 ----------GGAATGTTGTCTGGCTCGAGGA------------------------------------------------------------------------------------------------------------------------------------------------------------- t0578448 2 ----------GGAATGTTGTCTGGCTCGAGGAC------------------------------------------------------------------------------------------------------------------------------------------------------------ t0706986 2 -----------GAATGTTGTCTGGCTCGAGGA------------------------------------------------------------------------------------------------------------------------------------------------------------- t0171280 5 ------------AATGTTGTCTGGCTCGAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------- t3737794 1 // T37-m0435 scaffold67.0:1032896:1033067:+ 172(nt) -67.79(kcal/mol) TTTTTTGAGGGGAATGTTGTCTGGCTCGAGGCCTCTTAACTAGATCTATGATCTTCATCTCAATTGGTGACAATTTTATCCACCAATCTTAAAAAAATTACAGTCCCAGTTGAGAAAGATCATTGATTCTACGTTTAGTGACGTCGGACCAGGCTTCATTCCCCCCAATTAC T37-m0435 372 ....(((.((((((((..((((((..(((.(.(.((.(((((((((.((((((((..((((((((((.(((((((((................))))))...))))))))))))))))))))).)).)))).))).)).).).)))..))))))..)))))))).))).... **********GGAATGTTGTCTGGCTCGAGG********************************************************************************************************************************************* T37-m0435-5p 372 -------AGGGGAATGTTGTCTGGCTCGAGG--------------------------------------------------------------------------------------------------------------------------------------------- t1480437 1 ----------GGAATGTTGTCTGGCTCGAG---------------------------------------------------------------------------------------------------------------------------------------------- t3677723 1 ----------GGAATGTTGTCTGGCTCGAGG--------------------------------------------------------------------------------------------------------------------------------------------- t0001805 286 ----------GGAATGTTGTCTGGCTCGAGGC-------------------------------------------------------------------------------------------------------------------------------------------- t0054284 15 -----------GAATGTTGTCTGGCTCGAGGC-------------------------------------------------------------------------------------------------------------------------------------------- t0010009 65 -----------GAATGTTGTCTGGCTCGAGGCC------------------------------------------------------------------------------------------------------------------------------------------- t0315898 3 ------------AATGTTGTCTGGCTCGAGG--------------------------------------------------------------------------------------------------------------------------------------------- t3737794 1 // T37-m0464 scaffold75.0:598615:598785:- 171(nt) -65.04(kcal/mol) TTTTTTGAGGGGAATGTTGTCTGGCTCGAGGCCTCTAGTTAGATCTATGATCTCCATCTCAATTGGTGACAATTTTAACCACCAATCTTAAAAATTTTACAGTACCAGTTGAGAAAGATGATTGTTTCTATGTTTAGCGACCTCGGACCAGGCTTCATTCCCCCCAATTAC T37-m0464 373 ....(((.((((((((..((((((..(((((.(.((((.((((...(..(((((..((((((((((((..((((((..............))))))......))))))))))))..)).)))..).))))...)))).).)))))..))))))..)))))))).))).... **********GGAATGTTGTCTGGCTCGAGG******************************************************************************************************************************************** T37-m0464-5p 372 -------AGGGGAATGTTGTCTGGCTCGAGG-------------------------------------------------------------------------------------------------------------------------------------------- t1480437 1 ----------GGAATGTTGTCTGGCTCGAG--------------------------------------------------------------------------------------------------------------------------------------------- t3677723 1 ----------GGAATGTTGTCTGGCTCGAGG-------------------------------------------------------------------------------------------------------------------------------------------- t0001805 286 ----------GGAATGTTGTCTGGCTCGAGGC------------------------------------------------------------------------------------------------------------------------------------------- t0054284 15 -----------GAATGTTGTCTGGCTCGAGGC------------------------------------------------------------------------------------------------------------------------------------------- t0010009 65 -----------GAATGTTGTCTGGCTCGAGGCC------------------------------------------------------------------------------------------------------------------------------------------ t0315898 3 ------------AATGTTGTCTGGCTCGAGG-------------------------------------------------------------------------------------------------------------------------------------------- t3737794 1 ---------------------------------------------------------------------------------------------------------------------------------------AGCGACCTCGGACCAGGCTT---------------- t1623052 1 // novel8 T24-m0008 scaffold1.0:3618540:3618679:- 140(nt) -49.50(kcal/mol) GTGAATTACGGAGCAGTCTCCTCTTGGCAAACTGCCTATATCTTCTACATACGAAATTGAATACATGCACATGGTGGTCTGGCCACATGATCTAATGAGAAAGGCTGTCTGCCAAAGGAGATCTGCTCAGCAATTCTACT T24-m0008 31 (((((((.(.((((((((((((.((((((.((.((((...((((...((........))..........((((.(((.....))))))).......)))).)))).)).)))))))))))).)))))).).))))).)). **********GAGCAGTCTCCTCTTGGCAAAC************************************************************************************************************ T24-m0008-5p 31 ----------GAGCAGTCTCCTCTTGGCA--------------------------------------------------------------------------------------------------------------- t2393076 1 ----------GAGCAGTCTCCTCTTGGCAA-------------------------------------------------------------------------------------------------------------- t0374403 4 ----------GAGCAGTCTCCTCTTGGCAAA------------------------------------------------------------------------------------------------------------- t1227945 2 ----------GAGCAGTCTCCTCTTGGCAAAC------------------------------------------------------------------------------------------------------------ t0046696 24 // T37-m0010 scaffold1.0:3618540:3618679:- 140(nt) -49.50(kcal/mol) GTGAATTACGGAGCAGTCTCCTCTTGGCAAACTGCCTATATCTTCTACATACGAAATTGAATACATGCACATGGTGGTCTGGCCACATGATCTAATGAGAAAGGCTGTCTGCCAAAGGAGATCTGCTCAGCAATTCTACT T37-m0010 59 (((((((.(.((((((((((((.((((((.((.((((...((((...((........))..........((((.(((.....))))))).......)))).)))).)).)))))))))))).)))))).).))))).)). **********GAGCAGTCTCCTCTTGGCAAAC************************************************************************************************************ T37-m0010-5p 58 ----------GAGCAGTCTCCTCTTGGCA--------------------------------------------------------------------------------------------------------------- t2504521 1 ----------GAGCAGTCTCCTCTTGGCAA-------------------------------------------------------------------------------------------------------------- t0097846 9 ----------GAGCAGTCTCCTCTTGGCAAA------------------------------------------------------------------------------------------------------------- t0162950 6 ----------GAGCAGTCTCCTCTTGGCAAAC------------------------------------------------------------------------------------------------------------ t0016700 42 --------------AGTCTCCTCTTGGCAAACTGCC-------------------------------------------------------------------------------------------------------- t2709019 1 // novel83 T24-m0092 scaffold16.0:214370:214501:+ 132(nt) -59.10(kcal/mol) CCCAATTAGGACCAAAGTATCACGGAGCGCAAAGAGAAGCAGAAAGATCGCCGCCGCTTTTCACCCGAATCGTAGGCCTTTGGCGTCTCTGCTCGTATCTTTGCGTTCCACTGATTCTTTCGCCCTGATTGG T24-m0092 24 .(((((((((.(.((((.((((.((((((((((((..((((((..((.(((((((((..(((....)))..)).)))....))))))))))))....))))))))))))..)))).)))).).))))))))) ****************************************************************************************************TTGCGTTCCACTGATTCTTTCG********** T24-m0092-3p 24 ---------------------------------------------------------------------------------------------------TTTGCGTTCCACTGATTCTTTCG---------- t4791116 1 ----------------------------------------------------------------------------------------------------TTGCGTTCCACTGATTCTTTCG---------- t0048072 23 // novel84 T24-m0093 scaffold16.0:1278137:1278227:+ 91(nt) -36.80(kcal/mol) GGATATTTGAAATTTGATCTAACGGCTAAAAATATGAGCTGCTTTAAAAGTTTTAATAATTTTAGTCGTTAGATTAAATTTCAATAACCCA T24-m0093 27 ((....(((((((((((((((((((((((((.((((((((........)))))..))).)))))))))))))))))))))))))....)). **********AATTTGATCTAACGGCTAAAAAT********************************************************** T24-m0093-5p 27 ----------AATTTGATCTAACGGCTA--------------------------------------------------------------- t5225195 1 ----------AATTTGATCTAACGGCTAAAA------------------------------------------------------------ t4549064 1 ----------AATTTGATCTAACGGCTAAAAAT---------------------------------------------------------- t0102756 12 ----------AATTTGATCTAACGGCTAAAAATA--------------------------------------------------------- t5039473 1 -----------ATTTGATCTAACGGCTAAAAATA--------------------------------------------------------- t2348765 1 ------------TTTGATCTAACGGCTAAAAAT---------------------------------------------------------- t0654348 3 ------------TTTGATCTAACGGCTAAAAATA--------------------------------------------------------- t0196748 7 ------------TTTGATCTAACGGCTAAAAATAT-------------------------------------------------------- t3518915 1 // novel99 T24-m0114 scaffold189.0:22699:22765:- 67(nt) -59.20(kcal/mol) ATCCTCATGACCAAGGAGTGTGGGCCGTTGGATGTCCAACGACCCACACTCCTTGGTCATGAGGATC T24-m0114 24 ((((((((((((((((((((((((.((((((....)))))).)))))))))))))))))))))))). **********CCAAGGAGTGTGGGCCGTTGG************************************ T24-m0114-5p 23 ----TCATGACCAAGGAGTGTGGGCCGT--------------------------------------- t2617117 1 -------TGACCAAGGAGTGTGGGCCGT--------------------------------------- t0585592 3 --------GACCAAGGAGTGTGGGCCGTTGGA----------------------------------- t1040949 2 ---------ACCAAGGAGTGTGGGCCGTTGGAT---------------------------------- t2369861 1 ----------CCAAGGAGTGTGGGCCGTTGG------------------------------------ t0175793 8 ----------CCAAGGAGTGTGGGCCGTTGGA----------------------------------- t0597980 3 ----------CCAAGGAGTGTGGGCCGTTGGAT---------------------------------- t4337700 1 -----------CAAGGAGTGTGGGCCGTTGGA----------------------------------- t1056593 2 ------------AAGGAGTGTGGGCCGTTGGAT---------------------------------- t1058442 2 -------------AGGAGTGTGGGCCGTTGGATGTCC------------------------------ t5264150 1 novel113 T24-m0130 scaffold2.0:3084527:3084621:+ 95(nt) -36.20(kcal/mol) TAAAATGGGTGGAACGAGCTGTTCCACGGGACAAGTTTTGAGTGAATTTTCGTTCCACCTCACCCCCTGGAACGACTCGTTCCATATCCGTGGAA T24-m0130 30 ....((((((((((((((.(((((((.(((........((((.((((....))))...)))).))).))))))).))))))))))..)))).... **********GGAACGAGCTGTTCCACGGGACA************************************************************** T24-m0130-5p 29 ---------TGGAACGAGCTGTTCCACGGGACA-------------------------------------------------------------- t1165926 2 ---------TGGAACGAGCTGTTCCACGGGACAA------------------------------------------------------------- t5086939 1 ----------GGAACGAGCTGTTCCACGGGACA-------------------------------------------------------------- t0046127 24 ----------GGAACGAGCTGTTCCACGGGACAA------------------------------------------------------------- t1464596 1 -----------GAACGAGCTGTTCCACGGGACA-------------------------------------------------------------- t3733480 1 -------------------------ACGGGACAAGTTTTGAGTGAATT----------------------------------------------- t4857594 1 // T37-m0150 scaffold2.0:3084527:3084621:+ 95(nt) -36.20(kcal/mol) TAAAATGGGTGGAACGAGCTGTTCCACGGGACAAGTTTTGAGTGAATTTTCGTTCCACCTCACCCCCTGGAACGACTCGTTCCATATCCGTGGAA T37-m0150 24 ....((((((((((((((.(((((((.(((........((((.((((....))))...)))).))).))))))).))))))))))..)))).... **********GGAACGAGCTGTTCCACGGGACA************************************************************** T37-m0150-5p 23 ---------TGGAACGAGCTGTTCCACGGGACA-------------------------------------------------------------- t3079945 1 ----------GGAACGAGCTGTTCCACGGGACA-------------------------------------------------------------- t0040296 19 ------------AACGAGCTGTTCCACGGGACA-------------------------------------------------------------- t1920327 1 ------------AACGAGCTGTTCCACGGGACAAGT----------------------------------------------------------- t2760928 1 -------------ACGAGCTGTTCCACGGGACAAGT----------------------------------------------------------- t2554159 1 --------------CGAGCTGTTCCACGGGACAAGT----------------------------------------------------------- t2783852 1 // novel116 T24-m0133 scaffold2.0:3777558:3777647:+ 90(nt) -21.90(kcal/mol) ATTTTTCCCATTGGAAACCTTTGCTTGGTGTTCATGTCGAAGGACCAACGTATATGTCTTGTTCACCGTAGGCAGTGGTTCAAGAAGAAG T24-m0133 26 .((((((...((((..(((.((((((((((..((.(((....)))..(((....)))..))..)))))..))))).))))))))))))). **********************************************************TTGTTCACCGTAGGCAGTGGTT********** T24-m0133-3p 26 ---------------------------------------------------------CTTGTTCACCGTAGGCAGTGGTT---------- t4366119 1 ----------------------------------------------------------TTGTTCACCGTAGGCAGTGGTT---------- t0068263 17 -----------------------------------------------------------TGTTCACCGTAGGCAGTGGTT---------- t0412156 4 -----------------------------------------------------------TGTTCACCGTAGGCAGTGGTTC--------- t0398550 4 // T37-m0153 scaffold2.0:3777558:3777647:+ 90(nt) -21.90(kcal/mol) ATTTTTCCCATTGGAAACCTTTGCTTGGTGTTCATGTCGAAGGACCAACGTATATGTCTTGTTCACCGTAGGCAGTGGTTCAAGAAGAAG T37-m0153 26 .((((((...((((..(((.((((((((((..((.(((....)))..(((....)))..))..)))))..))))).))))))))))))). **********************************************************TTGTTCACCGTAGGCAGTGGTT********** T37-m0153-3p 26 ----------------------------------------------------------TTGTTCACCGTAGGCAGTGGTT---------- t0046277 17 -----------------------------------------------------------TGTTCACCGTAGGCAGTGGTT---------- t0346315 3 -----------------------------------------------------------TGTTCACCGTAGGCAGTGGTTC--------- t0175449 5 -------------------------------------------------------------TTCACCGTAGGCAGTGGTTC--------- t2344922 1 // novel123 T24-m0141 scaffold205.0:347556:347765:+ 210(nt) -120.90(kcal/mol) GTTTGTTTGTAACAGTTGCAAACACATCTTCATTATTGCGGATCATAGTGATCACGGCTGTAGCGGCAGTTTCACCGGTTGTCAGATCGGTCACTAGATGTGAGGGAGGTGACCTCTAAAAGGCTTAGAAATAGGCCGGTTGCTGCAACAGCCATGATCACTCCGATCCGTAGTACTGATGAAGATGTGTTTGCAACTGTTATAAACAAA T24-m0141 24 .(((((((((((((((((((((((((((((((((((((((((((..((((((((.((((((.(((((((..(((((..((.(((.(((........))).))).)).))))).........((((((....))))))..))))))).)))))).))))))))..))))))))))...))))))))))))))))))))))))))))))))) ***********************************************************************************************************************************************************************************TGAAGATGTGTTTGCAACTGT********** T24-m0141-3p 24 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATGAAGATGTGTTTGCAAC------------- t5245944 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGAAGATGTGTTTGCAACTGT---------- t1096038 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGAAGATGTGTTTGCAACTGTT--------- t2437060 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAGATGTGTTTGCAACTG----------- t0979666 2 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAGATGTGTTTGCAACTGT---------- t2177457 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGATGTGTTTGCAACTGT---------- t0085931 14 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGATGTGTTTGCAACTGTT--------- t0675108 2 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGATGTGTTTGCAACTGTTA-------- t3487072 1 // T24-m0143 scaffold205.0:347557:347766:- 210(nt) -105.12(kcal/mol) GTTTGTTTATAACAGTTGCAAACACATCTTCATCAGTACTACGGATCGGAGTGATCATGGCTGTTGCAGCAACCGGCCTATTTCTAAGCCTTTTAGAGGTCACCTCCCTCACATCTAGTGACCGATCTGACAACCGGTGAAACTGCCGCTACAGCCGTGATCACTATGATCCGCAATAATGAAGATGTGTTTGCAACTGTTACAAACAAA T24-m0143 21 .(((((((.((((((((((((((((((((((((........(((((((.(((((((((((((((.((.((((((((......((((((...)))))).((((..((..((((.....))))..))..))))..))))).....))).)).))))))))))))))).))))))).....)))))))))))))))))))))))).))))))) ***********************************************************************************************************************************************************************************TGAAGATGTGTTTGCAACTGT********** T24-m0143-3p 21 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAGATGTGTTTGCAACTG----------- t0979666 2 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAGATGTGTTTGCAACTGT---------- t2177457 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGATGTGTTTGCAACTGT---------- t0085931 14 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGATGTGTTTGCAACTGTT--------- t0675108 2 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGATGTGTTTGCAACTGTTA-------- t3487072 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGATGTGTTTGCAACTGTTAC------- t4266253 1 // T37-m0164 scaffold205.0:347556:347765:+ 210(nt) -120.90(kcal/mol) GTTTGTTTGTAACAGTTGCAAACACATCTTCATTATTGCGGATCATAGTGATCACGGCTGTAGCGGCAGTTTCACCGGTTGTCAGATCGGTCACTAGATGTGAGGGAGGTGACCTCTAAAAGGCTTAGAAATAGGCCGGTTGCTGCAACAGCCATGATCACTCCGATCCGTAGTACTGATGAAGATGTGTTTGCAACTGTTATAAACAAA T37-m0164 35 .(((((((((((((((((((((((((((((((((((((((((((..((((((((.((((((.(((((((..(((((..((.(((.(((........))).))).)).))))).........((((((....))))))..))))))).)))))).))))))))..))))))))))...))))))))))))))))))))))))))))))))) ***********************************************************************************************************************************************************************************TGAAGATGTGTTTGCAACTGT********** T37-m0164-3p 35 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGAAGATGTGTTTGCAACTG----------- t2494344 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGAAGATGTGTTTGCAACTGTT--------- t0356971 3 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAGATGTGTTTGCAACTGT---------- t0591032 2 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGATGTGTTTGCAACTG----------- t3428585 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGATGTGTTTGCAACTGT---------- t0036321 21 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGATGTGTTTGCAACTGTT--------- t0167473 5 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGATGTGTTTGCAACTGTTA-------- t0550992 2 // T37-m0167 scaffold205.0:347557:347766:- 210(nt) -105.12(kcal/mol) GTTTGTTTATAACAGTTGCAAACACATCTTCATCAGTACTACGGATCGGAGTGATCATGGCTGTTGCAGCAACCGGCCTATTTCTAAGCCTTTTAGAGGTCACCTCCCTCACATCTAGTGACCGATCTGACAACCGGTGAAACTGCCGCTACAGCCGTGATCACTATGATCCGCAATAATGAAGATGTGTTTGCAACTGTTACAAACAAA T37-m0167 32 .(((((((.((((((((((((((((((((((((........(((((((.(((((((((((((((.((.((((((((......((((((...)))))).((((..((..((((.....))))..))..))))..))))).....))).)).))))))))))))))).))))))).....)))))))))))))))))))))))).))))))) ***********************************************************************************************************************************************************************************TGAAGATGTGTTTGCAACTGT********** T37-m0167-3p 32 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAAGATGTGTTTGCAACTGT---------- t0591032 2 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGATGTGTTTGCAACTG----------- t3428585 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGATGTGTTTGCAACTGT---------- t0036321 21 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGATGTGTTTGCAACTGTT--------- t0167473 5 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGATGTGTTTGCAACTGTTA-------- t0550992 2 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGATGTGTTTGCAACTGTTAC------- t3051338 1 // novel126 T24-m0146 scaffold21.0:922450:922540:- 91(nt) -20.56(kcal/mol) TCTCGTACTTAAGTTGTTTGATCTCTTGTTTCAGGTTCTCCACCTCCGCCATCAAAGATTCAACCTGACGGGAGCGAACAAGGAGGCGTTG T24-m0146 1254 ...(((.(((...(((((((..((((((..(((((((........................)))))))))))))))))))).))))))... ***********************************************************TCAACCTGACGGGAGCGAACAA********** T24-m0146-3p 1250 --------------------------------------------------------GATTCAACCTGACGGGAGCGAA------------- t0137635 9 ---------------------------------------------------------ATTCAACCTGACGGGAGCGAACAA---------- t0560970 3 ----------------------------------------------------------TTCAACCTGACGGGAGCGAAC------------ t4811959 1 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACA----------- t0570181 3 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAA---------- t4652520 1 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAAG--------- t0035046 30 -----------------------------------------------------------TCAACCTGACGGGAGCGAA------------- t4851623 1 -----------------------------------------------------------TCAACCTGACGGGAGCGAACA----------- t0130292 10 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAA---------- t0000644 680 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAAG--------- t0220357 6 ------------------------------------------------------------CAACCTGACGGGAGCGAACA----------- t3298133 1 ------------------------------------------------------------CAACCTGACGGGAGCGAACAA---------- t0121440 11 ------------------------------------------------------------CAACCTGACGGGAGCGAACAAG--------- t0000988 491 -------------------------------------------------------------AACCTGACGGGAGCGAACAA---------- t3037287 1 -------------------------------------------------------------AACCTGACGGGAGCGAACAAG--------- t4062295 1 --------------------------------------------------------------ACCTGACGGGAGCGAACAAG--------- t2074405 1 ---------------------------------------------------------------CCTGACGGGAGCGAACAAG--------- t0654386 3 ----------------------------------------------------------------CTGACGGGAGCGAACAAG--------- t1290125 1 // T24-m0147 scaffold21.0:930378:930468:- 91(nt) -20.56(kcal/mol) TCTCGTACTTAAGTTGTTTGATCTCTTGTTTCAGGTTCTCCACCTCCGCCATCAAAGATTCAACCTGACGGGAGCGAACAAGGAGGCGTTG T24-m0147 1254 ...(((.(((...(((((((..((((((..(((((((........................)))))))))))))))))))).))))))... ***********************************************************TCAACCTGACGGGAGCGAACAA********** T24-m0147-3p 1250 --------------------------------------------------------GATTCAACCTGACGGGAGCGAA------------- t0137635 9 ---------------------------------------------------------ATTCAACCTGACGGGAGCGAACAA---------- t0560970 3 ----------------------------------------------------------TTCAACCTGACGGGAGCGAAC------------ t4811959 1 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACA----------- t0570181 3 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAA---------- t4652520 1 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAAG--------- t0035046 30 -----------------------------------------------------------TCAACCTGACGGGAGCGAA------------- t4851623 1 -----------------------------------------------------------TCAACCTGACGGGAGCGAACA----------- t0130292 10 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAA---------- t0000644 680 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAAG--------- t0220357 6 ------------------------------------------------------------CAACCTGACGGGAGCGAACA----------- t3298133 1 ------------------------------------------------------------CAACCTGACGGGAGCGAACAA---------- t0121440 11 ------------------------------------------------------------CAACCTGACGGGAGCGAACAAG--------- t0000988 491 -------------------------------------------------------------AACCTGACGGGAGCGAACAA---------- t3037287 1 -------------------------------------------------------------AACCTGACGGGAGCGAACAAG--------- t4062295 1 --------------------------------------------------------------ACCTGACGGGAGCGAACAAG--------- t2074405 1 ---------------------------------------------------------------CCTGACGGGAGCGAACAAG--------- t0654386 3 ----------------------------------------------------------------CTGACGGGAGCGAACAAG--------- t1290125 1 // T24-m0179 scaffold254.0:12758:12848:- 91(nt) -20.56(kcal/mol) TCTCGTACTTAAGTTGTTTGATCTCTTGTTTCAGGTTCTCCACCTCCGCCATCAAAGATTCAACCTGACGGGAGCGAACAAGGAGGCGTTG T24-m0179 1254 ...(((.(((...(((((((..((((((..(((((((........................)))))))))))))))))))).))))))... ***********************************************************TCAACCTGACGGGAGCGAACAA********** T24-m0179-3p 1250 --------------------------------------------------------GATTCAACCTGACGGGAGCGAA------------- t0137635 9 ---------------------------------------------------------ATTCAACCTGACGGGAGCGAACAA---------- t0560970 3 ----------------------------------------------------------TTCAACCTGACGGGAGCGAAC------------ t4811959 1 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACA----------- t0570181 3 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAA---------- t4652520 1 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAAG--------- t0035046 30 -----------------------------------------------------------TCAACCTGACGGGAGCGAA------------- t4851623 1 -----------------------------------------------------------TCAACCTGACGGGAGCGAACA----------- t0130292 10 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAA---------- t0000644 680 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAAG--------- t0220357 6 ------------------------------------------------------------CAACCTGACGGGAGCGAACA----------- t3298133 1 ------------------------------------------------------------CAACCTGACGGGAGCGAACAA---------- t0121440 11 ------------------------------------------------------------CAACCTGACGGGAGCGAACAAG--------- t0000988 491 -------------------------------------------------------------AACCTGACGGGAGCGAACAA---------- t3037287 1 -------------------------------------------------------------AACCTGACGGGAGCGAACAAG--------- t4062295 1 --------------------------------------------------------------ACCTGACGGGAGCGAACAAG--------- t2074405 1 ---------------------------------------------------------------CCTGACGGGAGCGAACAAG--------- t0654386 3 ----------------------------------------------------------------CTGACGGGAGCGAACAAG--------- t1290125 1 // T24-m0436 scaffold768.0:104282:104372:+ 91(nt) -20.56(kcal/mol) TCTCGTACTTAAGTTGTTTGATCTCTTGTTTCAGGTTCTCCACCTCCGCCATCAAAGATTCAACCTGACGGGAGCGAACAAGGAGGCGTTG T24-m0436 1256 ...(((.(((...(((((((..((((((..(((((((........................)))))))))))))))))))).))))))... ***********************************************************TCAACCTGACGGGAGCGAACAA********** T24-m0436-3p 1251 ---------------------------------------------------TCAAAGATTCAACCTGACGGGAGC---------------- t2196620 1 --------------------------------------------------------GATTCAACCTGACGGGAGCGAA------------- t0137635 9 ---------------------------------------------------------ATTCAACCTGACGGGAGCGA-------------- t3254562 1 ---------------------------------------------------------ATTCAACCTGACGGGAGCGAACAA---------- t0560970 3 ----------------------------------------------------------TTCAACCTGACGGGAGCGAAC------------ t4811959 1 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACA----------- t0570181 3 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAA---------- t4652520 1 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAAG--------- t0035046 30 -----------------------------------------------------------TCAACCTGACGGGAGCGAA------------- t4851623 1 -----------------------------------------------------------TCAACCTGACGGGAGCGAACA----------- t0130292 10 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAA---------- t0000644 680 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAAG--------- t0220357 6 ------------------------------------------------------------CAACCTGACGGGAGCGAACA----------- t3298133 1 ------------------------------------------------------------CAACCTGACGGGAGCGAACAA---------- t0121440 11 ------------------------------------------------------------CAACCTGACGGGAGCGAACAAG--------- t0000988 491 -------------------------------------------------------------AACCTGACGGGAGCGAACAA---------- t3037287 1 -------------------------------------------------------------AACCTGACGGGAGCGAACAAG--------- t4062295 1 --------------------------------------------------------------ACCTGACGGGAGCGAACAAG--------- t2074405 1 ---------------------------------------------------------------CCTGACGGGAGCGAACAAG--------- t0654386 3 ----------------------------------------------------------------CTGACGGGAGCGAACAAG--------- t1290125 1 // T24-m0437 scaffold768.0:115512:115602:- 91(nt) -20.56(kcal/mol) TCTCGTACTTAAGTTGTTTGATCTCTTGTTTCAGGTTCTCCACCTCCGCCATCAAAGATTCAACCTGACGGGAGCGAACAAGGAGGCGTTG T24-m0437 1254 ...(((.(((...(((((((..((((((..(((((((........................)))))))))))))))))))).))))))... ***********************************************************TCAACCTGACGGGAGCGAACAA********** T24-m0437-3p 1250 --------------------------------------------------------GATTCAACCTGACGGGAGCGAA------------- t0137635 9 ---------------------------------------------------------ATTCAACCTGACGGGAGCGAACAA---------- t0560970 3 ----------------------------------------------------------TTCAACCTGACGGGAGCGAAC------------ t4811959 1 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACA----------- t0570181 3 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAA---------- t4652520 1 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAAG--------- t0035046 30 -----------------------------------------------------------TCAACCTGACGGGAGCGAA------------- t4851623 1 -----------------------------------------------------------TCAACCTGACGGGAGCGAACA----------- t0130292 10 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAA---------- t0000644 680 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAAG--------- t0220357 6 ------------------------------------------------------------CAACCTGACGGGAGCGAACA----------- t3298133 1 ------------------------------------------------------------CAACCTGACGGGAGCGAACAA---------- t0121440 11 ------------------------------------------------------------CAACCTGACGGGAGCGAACAAG--------- t0000988 491 -------------------------------------------------------------AACCTGACGGGAGCGAACAA---------- t3037287 1 -------------------------------------------------------------AACCTGACGGGAGCGAACAAG--------- t4062295 1 --------------------------------------------------------------ACCTGACGGGAGCGAACAAG--------- t2074405 1 ---------------------------------------------------------------CCTGACGGGAGCGAACAAG--------- t0654386 3 ----------------------------------------------------------------CTGACGGGAGCGAACAAG--------- t1290125 1 // T37-m0171 scaffold21.0:922450:922540:- 91(nt) -20.56(kcal/mol) TCTCGTACTTAAGTTGTTTGATCTCTTGTTTCAGGTTCTCCACCTCCGCCATCAAAGATTCAACCTGACGGGAGCGAACAAGGAGGCGTTG T37-m0171 990 ...(((.(((...(((((((..((((((..(((((((........................)))))))))))))))))))).))))))... ***********************************************************TCAACCTGACGGGAGCGAACAA********** T37-m0171-3p 988 --------------------------------------------------------GATTCAACCTGACGGGAGCGAA------------- t0100424 8 --------------------------------------------------------GATTCAACCTGACGGGAGCGAACA----------- t3482655 1 ---------------------------------------------------------ATTCAACCTGACGGGAGCGAACAA---------- t0457697 2 ----------------------------------------------------------TTCAACCTGACGGGAGCGAA------------- t0242401 4 ----------------------------------------------------------TTCAACCTGACGGGAGCGAAC------------ t0255272 4 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACA----------- t0080571 10 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAA---------- t2679233 1 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAAG--------- t0035808 21 -----------------------------------------------------------TCAACCTGACGGGAGCGAACA----------- t0137826 6 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAA---------- t0000883 517 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAAG--------- t0073179 11 ------------------------------------------------------------CAACCTGACGGGAGCGAACA----------- t3839861 1 ------------------------------------------------------------CAACCTGACGGGAGCGAACAA---------- t0046889 17 ------------------------------------------------------------CAACCTGACGGGAGCGAACAAG--------- t0001252 381 -------------------------------------------------------------AACCTGACGGGAGCGAACAAG--------- t0543536 2 --------------------------------------------------------------ACCTGACGGGAGCGAACAAG--------- t0571872 2 ---------------------------------------------------------------CCTGACGGGAGCGAACAAG--------- t0800652 2 // T37-m0172 scaffold21.0:930378:930468:- 91(nt) -20.56(kcal/mol) TCTCGTACTTAAGTTGTTTGATCTCTTGTTTCAGGTTCTCCACCTCCGCCATCAAAGATTCAACCTGACGGGAGCGAACAAGGAGGCGTTG T37-m0172 990 ...(((.(((...(((((((..((((((..(((((((........................)))))))))))))))))))).))))))... ***********************************************************TCAACCTGACGGGAGCGAACAA********** T37-m0172-3p 988 --------------------------------------------------------GATTCAACCTGACGGGAGCGAA------------- t0100424 8 --------------------------------------------------------GATTCAACCTGACGGGAGCGAACA----------- t3482655 1 ---------------------------------------------------------ATTCAACCTGACGGGAGCGAACAA---------- t0457697 2 ----------------------------------------------------------TTCAACCTGACGGGAGCGAA------------- t0242401 4 ----------------------------------------------------------TTCAACCTGACGGGAGCGAAC------------ t0255272 4 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACA----------- t0080571 10 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAA---------- t2679233 1 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAAG--------- t0035808 21 -----------------------------------------------------------TCAACCTGACGGGAGCGAACA----------- t0137826 6 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAA---------- t0000883 517 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAAG--------- t0073179 11 ------------------------------------------------------------CAACCTGACGGGAGCGAACA----------- t3839861 1 ------------------------------------------------------------CAACCTGACGGGAGCGAACAA---------- t0046889 17 ------------------------------------------------------------CAACCTGACGGGAGCGAACAAG--------- t0001252 381 -------------------------------------------------------------AACCTGACGGGAGCGAACAAG--------- t0543536 2 --------------------------------------------------------------ACCTGACGGGAGCGAACAAG--------- t0571872 2 ---------------------------------------------------------------CCTGACGGGAGCGAACAAG--------- t0800652 2 // T37-m0201 scaffold254.0:12758:12848:- 91(nt) -20.56(kcal/mol) TCTCGTACTTAAGTTGTTTGATCTCTTGTTTCAGGTTCTCCACCTCCGCCATCAAAGATTCAACCTGACGGGAGCGAACAAGGAGGCGTTG T37-m0201 990 ...(((.(((...(((((((..((((((..(((((((........................)))))))))))))))))))).))))))... ***********************************************************TCAACCTGACGGGAGCGAACAA********** T37-m0201-3p 988 --------------------------------------------------------GATTCAACCTGACGGGAGCGAA------------- t0100424 8 --------------------------------------------------------GATTCAACCTGACGGGAGCGAACA----------- t3482655 1 ---------------------------------------------------------ATTCAACCTGACGGGAGCGAACAA---------- t0457697 2 ----------------------------------------------------------TTCAACCTGACGGGAGCGAA------------- t0242401 4 ----------------------------------------------------------TTCAACCTGACGGGAGCGAAC------------ t0255272 4 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACA----------- t0080571 10 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAA---------- t2679233 1 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAAG--------- t0035808 21 -----------------------------------------------------------TCAACCTGACGGGAGCGAACA----------- t0137826 6 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAA---------- t0000883 517 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAAG--------- t0073179 11 ------------------------------------------------------------CAACCTGACGGGAGCGAACA----------- t3839861 1 ------------------------------------------------------------CAACCTGACGGGAGCGAACAA---------- t0046889 17 ------------------------------------------------------------CAACCTGACGGGAGCGAACAAG--------- t0001252 381 -------------------------------------------------------------AACCTGACGGGAGCGAACAAG--------- t0543536 2 --------------------------------------------------------------ACCTGACGGGAGCGAACAAG--------- t0571872 2 ---------------------------------------------------------------CCTGACGGGAGCGAACAAG--------- t0800652 2 // T37-m0466 scaffold768.0:104282:104372:+ 91(nt) -20.56(kcal/mol) TCTCGTACTTAAGTTGTTTGATCTCTTGTTTCAGGTTCTCCACCTCCGCCATCAAAGATTCAACCTGACGGGAGCGAACAAGGAGGCGTTG T37-m0466 993 ...(((.(((...(((((((..((((((..(((((((........................)))))))))))))))))))).))))))... ***********************************************************TCAACCTGACGGGAGCGAACAA********** T37-m0466-3p 991 --------------------------------------------------------GATTCAACCTGACGGGAGCGA-------------- t2527093 1 --------------------------------------------------------GATTCAACCTGACGGGAGCGAA------------- t0100424 8 --------------------------------------------------------GATTCAACCTGACGGGAGCGAACA----------- t3482655 1 ---------------------------------------------------------ATTCAACCTGACGGGAGCGA-------------- t0789866 2 ---------------------------------------------------------ATTCAACCTGACGGGAGCGAACAA---------- t0457697 2 ----------------------------------------------------------TTCAACCTGACGGGAGCGAA------------- t0242401 4 ----------------------------------------------------------TTCAACCTGACGGGAGCGAAC------------ t0255272 4 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACA----------- t0080571 10 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAA---------- t2679233 1 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAAG--------- t0035808 21 -----------------------------------------------------------TCAACCTGACGGGAGCGAACA----------- t0137826 6 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAA---------- t0000883 517 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAAG--------- t0073179 11 ------------------------------------------------------------CAACCTGACGGGAGCGAACA----------- t3839861 1 ------------------------------------------------------------CAACCTGACGGGAGCGAACAA---------- t0046889 17 ------------------------------------------------------------CAACCTGACGGGAGCGAACAAG--------- t0001252 381 -------------------------------------------------------------AACCTGACGGGAGCGAACAAG--------- t0543536 2 --------------------------------------------------------------ACCTGACGGGAGCGAACAAG--------- t0571872 2 ---------------------------------------------------------------CCTGACGGGAGCGAACAAG--------- t0800652 2 // T37-m0467 scaffold768.0:115512:115602:- 91(nt) -20.56(kcal/mol) TCTCGTACTTAAGTTGTTTGATCTCTTGTTTCAGGTTCTCCACCTCCGCCATCAAAGATTCAACCTGACGGGAGCGAACAAGGAGGCGTTG T37-m0467 990 ...(((.(((...(((((((..((((((..(((((((........................)))))))))))))))))))).))))))... ***********************************************************TCAACCTGACGGGAGCGAACAA********** T37-m0467-3p 988 --------------------------------------------------------GATTCAACCTGACGGGAGCGAA------------- t0100424 8 --------------------------------------------------------GATTCAACCTGACGGGAGCGAACA----------- t3482655 1 ---------------------------------------------------------ATTCAACCTGACGGGAGCGAACAA---------- t0457697 2 ----------------------------------------------------------TTCAACCTGACGGGAGCGAA------------- t0242401 4 ----------------------------------------------------------TTCAACCTGACGGGAGCGAAC------------ t0255272 4 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACA----------- t0080571 10 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAA---------- t2679233 1 ----------------------------------------------------------TTCAACCTGACGGGAGCGAACAAG--------- t0035808 21 -----------------------------------------------------------TCAACCTGACGGGAGCGAACA----------- t0137826 6 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAA---------- t0000883 517 -----------------------------------------------------------TCAACCTGACGGGAGCGAACAAG--------- t0073179 11 ------------------------------------------------------------CAACCTGACGGGAGCGAACA----------- t3839861 1 ------------------------------------------------------------CAACCTGACGGGAGCGAACAA---------- t0046889 17 ------------------------------------------------------------CAACCTGACGGGAGCGAACAAG--------- t0001252 381 -------------------------------------------------------------AACCTGACGGGAGCGAACAAG--------- t0543536 2 --------------------------------------------------------------ACCTGACGGGAGCGAACAAG--------- t0571872 2 ---------------------------------------------------------------CCTGACGGGAGCGAACAAG--------- t0800652 2 // novel127 T24-m0148 scaffold211.0:201972:202216:+ 245(nt) -51.20(kcal/mol) ATGTCTTGGATTTATTTCATGGAATGTCCACACAGCATGTCATATAATTTTCCGGTCATTCTTGTAAATTTGGTAACCCAAATATTGTGGCACTACCATTTTGCTGCATAAAAGTTATTAGAGAAATGCTGTGACTCTTTCAAAAGTGAATTTTTCCATAGATTTTCTGTCATATCATGCTTTTAACATAATGTTTTTAATGTTAGCACGAGAATTGACGTTAAACTGTGAGGTAACAAAGAGTT T24-m0148 326 ...((((....(((((((((((((((((..((((((((.((..((((((((................((((((....))))))..((..(((.........)))..))..))))))))....)).)))))))).(((.......((.((((((......)))))).)).........((((...(((((..........))))))))).)))....))))))...)))))))))))..))))... ********************************************************************************************************************************************************************************************************************AATTGACGTTAAACTGTGAGGTA********** T24-m0148-3p 316 -----------------------------------------------------------------------------------------------------------------------------ATGCTGTGACTCTTTCAAAAGTGA------------------------------------------------------------------------------------------------ t2844237 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTTAGCACGAGAATTGACGTT----------------------- t0730175 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGAATTGACGTTAAACTGTGAGG------------ t1171111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATTGACGTTAAACTGTGAGGT----------- t0126385 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATTGACGTTAAACTGTGAGGTA---------- t2751747 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATTGACGTTAAACTGTGAGGTA---------- t0058484 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGACGTTAAACTGTGAGG------------ t5517967 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGACGTTAAACTGTGAGGT----------- t0862506 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGACGTTAAACTGTGAGGTA---------- t0002954 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGACGTTAAACTGTGAGGTAA--------- t0016395 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGACGTTAAACTGTGAGGTAAC-------- t4155650 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACGTTAAACTGTGAGGTA---------- t0326674 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACGTTAAACTGTGAGGTAA--------- t3178196 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACGTTAAACTGTGAGGTAAC-------- t0170410 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGACGTTAAACTGTGAGGTA---------- t4065088 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACGTTAAACTGTGAGGTAACAA------ t2235475 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGTTAAACTGTGAGGTAACAAA----- t1143585 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGTTAAACTGTGAGGTAACAAAG---- t0851365 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGTTAAACTGTGAGGTAACAAAG---- t4719218 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTAAACTGTGAGGTAACAAAGAG-- t2143820 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAACTGTGAGGTAACAAAGAG-- t1811366 // T37-m0173 scaffold211.0:201972:202216:+ 245(nt) -51.20(kcal/mol) ATGTCTTGGATTTATTTCATGGAATGTCCACACAGCATGTCATATAATTTTCCGGTCATTCTTGTAAATTTGGTAACCCAAATATTGTGGCACTACCATTTTGCTGCATAAAAGTTATTAGAGAAATGCTGTGACTCTTTCAAAAGTGAATTTTTCCATAGATTTTCTGTCATATCATGCTTTTAACATAATGTTTTTAATGTTAGCACGAGAATTGACGTTAAACTGTGAGGTAACAAAGAGTT T37-m0173 213 ...((((....(((((((((((((((((..((((((((.((..((((((((................((((((....))))))..((..(((.........)))..))..))))))))....)).)))))))).(((.......((.((((((......)))))).)).........((((...(((((..........))))))))).)))....))))))...)))))))))))..))))... ********************************************************************************************************************************************************************************************************************AATTGACGTTAAACTGTGAGGTA********** T37-m0173-3p 207 -----------------------------------------------------------------------------------------------------------------------------ATGCTGTGACTCTTTCAAAAGTGA------------------------------------------------------------------------------------------------ t3169753 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGAGAATTGACGTTAAACTG----------------- t3663737 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATTGACGTTAAACTGTGA-------------- t1134520 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATTGACGTTAAACTGTGAGGT----------- t0188416 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAATTGACGTTAAACTGTGAGGTA---------- t0377658 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATTGACGTTAAACTGTGAGGTA---------- t0041448 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATTGACGTTAAACTGTGAGGTAA--------- t2738121 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGACGTTAAACTGTGAGG------------ t3958094 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGACGTTAAACTGTGAGGT----------- t2994460 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGACGTTAAACTGTGAGGTA---------- t0004535 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTGACGTTAAACTGTGAGGTAA--------- t0018450 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACGTTAAACTGTGAGG------------ t3129216 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACGTTAAACTGTGAGGTA---------- t3783605 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACGTTAAACTGTGAGGTAA--------- t3663211 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGACGTTAAACTGTGAGGTAAC-------- t1230837 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGACGTTAAACTGTGAGGTA---------- t0323236 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACGTTAAACTGTGAGGTAACAA------ t2272305 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GACGTTAAACTGTGAGGTAACAAA----- t2841974 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGTTAAACTGTGAGGTAACAAA----- t2331827 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGTTAAACTGTGAGGTAACAAAG---- t2874957 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTAAACTGTGAGGTAACAAAGAG-- t2136061 // novel134 T24-m0156 scaffold222.0:500979:501111:+ 133(nt) -69.90(kcal/mol) GGCCACTGGATCAAATGATCCGGGCCTTTCAAATTTCATTTAACGGCCTACTTGTTTTGATCCTTTAAAACTGTAGTAATTTTTTACCGTTGGATAAAATTTGGACGGTCCGGATCATTTGATCCGGCAGCCT T24-m0156 58 (((..(((((((((((((((((((((.(((((((((.(((((((((.((((..(((((((....))))))).))))..........))))))))).))))))))).)))))))))))))))))))))..))). **********TCAAATGATCCGGGCCTTTCA****************************************************************************************************** T24-m0156-5p 57 ---------ATCAAATGATCCGGGCCTTTC------------------------------------------------------------------------------------------------------- t0057808 20 ----------TCAAATGATCCGGGCCTTT-------------------------------------------------------------------------------------------------------- t3799863 1 ----------TCAAATGATCCGGGCCTTTC------------------------------------------------------------------------------------------------------- t5080350 1 ----------TCAAATGATCCGGGCCTTTCA------------------------------------------------------------------------------------------------------ t0029991 34 ----------TCAAATGATCCGGGCCTTTCAAAT--------------------------------------------------------------------------------------------------- t4012615 1 ----------------------------------------------------------------------------TAATTTTTTACCGTTGGATA------------------------------------- t4587564 1 // T37-m0476 scaffold8.0:1407300:1407433:+ 134(nt) -51.30(kcal/mol) GGCCACCAGATCAAATGATCCGGGCCTTTCAAATTTCATTTAACGGCCCACCTGTTTTGACCTCTTAAAAGCTGTGATAATATTTGGCTGTTGGTTGAAATTTTGAAGGTCCAAATTACTTGATCCGATGGCTT T37-m0476 45 (((((.(.((((((.((((..((((((((.((((((((.((((((((((((..(((((.........))))).))).........))))))))).)))))))).))))))))..)))).)))))).).))))). **********TCAAATGATCCGGGCCTTTCA******************************************************************************************************* T37-m0476-5p 44 --------GATCAAATGATCCGGGCCTTT--------------------------------------------------------------------------------------------------------- t0936833 1 ---------ATCAAATGATCCGGGCCTTTC-------------------------------------------------------------------------------------------------------- t0084028 10 ----------TCAAATGATCCGGGCCTTTCA------------------------------------------------------------------------------------------------------- t0022318 32 -----------CAAATGATCCGGGCCTTTCAAAT---------------------------------------------------------------------------------------------------- t3588488 1 ------------------------------------------------------------------------------------------TTGGTTGAAATTTTGAAGGTC----------------------- t2153607 1 novel158 T24-m0192 scaffold268.0:218547:218739:- 193(nt) -44.44(kcal/mol) ACTTAATTGGCTTGTTCTCATGCATTTATGTTGTTTTTCCTTAGTTAGTTTAGTGTTTAAAGTCATTTTCGTGCAATTTCAGGTTTTAGTGTCAAAGTATGAAAAAAGAAGCAATTTGGAGCATTCTAGAGCATTTTTGGGCCAAGATTGGATAGTGCAAGCATGGAGGCATGAGGATGGACAAATTTGAAGG T24-m0192 76 .(((..(((..(..(((((((((.((((((((((...(((.......(((((((((((.......(((((((((.....((........)).....))))))))).((((((........)).)))).))))))...))))).......)))....)).)))))))).)))))))))..).))).....))). ****************************************************************************************************************************************************************GCATGGAGGCATGAGGATGGACA********** T24-m0192-3p 74 --------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCATGGAGGCATGAGGATGGACA---------- t0969268 2 ---------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATGGAGGCATGAGGATGGACA---------- t0088519 14 ----------------------------------------------------------------------------------------------------------------------------------------------------------------GCATGGAGGCATGAGGATGGACA---------- t0017993 51 ----------------------------------------------------------------------------------------------------------------------------------------------------------------GCATGGAGGCATGAGGATGGACAA--------- t3274739 1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAGGCATGAGGATGGACA---------- t0312032 5 -------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAGGCATGAGGATGGACA---------- t5066777 1 --------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGGCATGAGGATGGACA---------- t1482424 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGCATGAGGATGGACAA--------- t2421742 1 // T37-m0211 scaffold268.0:218547:218739:- 193(nt) -44.44(kcal/mol) ACTTAATTGGCTTGTTCTCATGCATTTATGTTGTTTTTCCTTAGTTAGTTTAGTGTTTAAAGTCATTTTCGTGCAATTTCAGGTTTTAGTGTCAAAGTATGAAAAAAGAAGCAATTTGGAGCATTCTAGAGCATTTTTGGGCCAAGATTGGATAGTGCAAGCATGGAGGCATGAGGATGGACAAATTTGAAGG T37-m0211 48 .(((..(((..(..(((((((((.((((((((((...(((.......(((((((((((.......(((((((((.....((........)).....))))))))).((((((........)).)))).))))))...))))).......)))....)).)))))))).)))))))))..).))).....))). ****************************************************************************************************************************************************************GCATGGAGGCATGAGGATGGACA********** T37-m0211-3p 48 --------------------------------------------------------------------------------------------------------------------------------------------------------------AAGCATGGAGGCATGAGGATGGACA---------- t0977384 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------AGCATGGAGGCATGAGGATGGACA---------- t0052166 15 ----------------------------------------------------------------------------------------------------------------------------------------------------------------GCATGGAGGCATGAGGATGGACA---------- t0026076 28 ----------------------------------------------------------------------------------------------------------------------------------------------------------------GCATGGAGGCATGAGGATGGACAA--------- t3805441 1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGAGGCATGAGGATGGACA---------- t2433727 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAGGCATGAGGATGGACA---------- t3290751 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGAGGCATGAGGATGGACAA--------- t2383818 1 novel17 T24-m0017 scaffold103.0:807736:807904:- 169(nt) -93.10(kcal/mol) ATTGTCTAGGACACACCAATATCAACTTTATTTGTTCATTAATACTTATAAAGTCATTACACTAGAATTTTCTTTCAAAGAAAATTCTAGTGTATTGACTTTATAAGTATTAATGGCTTTGGTATTAATTAATGAACAAATAAAGTTGATATTGGTGTGTCCTCTATAA T24-m0017 212 .((((..((((((((((((((((((((((((((((((((((.((((((((((((((.((((((((((((((((.....)))))))))))))))).)))))))))))))).(((((.(...).)))))..))))))))))))))))))))))))))))))))))..)))) ******************************************************************************************************************************************AATAAAGTTGATATTGGTGTG********** T24-m0017-3p 212 ----------------------------------------------------------------------------------------------------------------------------------------CAAATAAAGTTGATATTGGTG------------ t2148953 1 -----------------------------------------------------------------------------------------------------------------------------------------AAATAAAGTTGATATTGGTGT----------- t0925781 2 -----------------------------------------------------------------------------------------------------------------------------------------AAATAAAGTTGATATTGGTGTG---------- t2001854 1 ------------------------------------------------------------------------------------------------------------------------------------------AATAAAGTTGATATTGGTGTG---------- t0002991 207 ------------------------------------------------------------------------------------------------------------------------------------------AATAAAGTTGATATTGGTGTGT--------- t5251622 1 // T37-m0019 scaffold103.0:807736:807904:- 169(nt) -93.10(kcal/mol) ATTGTCTAGGACACACCAATATCAACTTTATTTGTTCATTAATACTTATAAAGTCATTACACTAGAATTTTCTTTCAAAGAAAATTCTAGTGTATTGACTTTATAAGTATTAATGGCTTTGGTATTAATTAATGAACAAATAAAGTTGATATTGGTGTGTCCTCTATAA T37-m0019 235 .((((..((((((((((((((((((((((((((((((((((.((((((((((((((.((((((((((((((((.....)))))))))))))))).)))))))))))))).(((((.(...).)))))..))))))))))))))))))))))))))))))))))..)))) ******************************************************************************************************************************************AATAAAGTTGATATTGGTGTG********** T37-m0019-3p 232 --------------------------------------------------------------------------------------------------------------------------------------AACAAATAAAGTTGATATTGG-------------- t3330878 1 -----------------------------------------------------------------------------------------------------------------------------------------AAATAAAGTTGATATTGGTGT----------- t0405731 3 -----------------------------------------------------------------------------------------------------------------------------------------AAATAAAGTTGATATTGGTGTG---------- t1925952 1 ------------------------------------------------------------------------------------------------------------------------------------------AATAAAGTTGATATTGGTGT----------- t1800634 1 ------------------------------------------------------------------------------------------------------------------------------------------AATAAAGTTGATATTGGTGTG---------- t0002416 223 ------------------------------------------------------------------------------------------------------------------------------------------AATAAAGTTGATATTGGTGTGT--------- t0763457 2 ---------------------------------------------------------------------------------------------------------------------------------------------AAAGTTGATATTGGTGTGTCCT------ t0683358 2 ----------------------------------------------------------------------------------------------------------------------------------------------AAGTTGATATTGGTGTGTCCT------ t0431826 2 // novel172 T24-m0208 scaffold282.0:137092:137161:- 70(nt) -21.10(kcal/mol) GAGTAAGGCTTTAAGTACAGTACGGAGTCATGTGAGCTTCCTTCATACTGTGTCTTGATAGTGCTTGCAA T24-m0208 47 ..((((((((((((((((((((.((((....(....)...)))).))))))).))))).))).))))).. **********TTAAGTACAGTACGGAGTCATG************************************** T24-m0208-5p 47 ---------TTTAAGTACAGTACGGAGTCA---------------------------------------- t4975451 1 ---------TTTAAGTACAGTACGGAGTCAT--------------------------------------- t0068387 17 ----------TTAAGTACAGTACGGAGTCAT--------------------------------------- t4441558 1 ----------TTAAGTACAGTACGGAGTCATG-------------------------------------- t0043231 25 -----------TAAGTACAGTACGGAGTCATG-------------------------------------- t0454768 3 // T37-m0193 scaffold249.0:126506:126575:- 70(nt) -24.00(kcal/mol) GAGTAAGGTTTTAAGTACAGTACGGAGTCATGTGAGCTTCCTTCGTACTGTGTCTTAATAGTGCTTGCAA T37-m0193 54 ..(((((...(((((((((((((((((....(....)...)))))))))))).))))).....))))).. **********TTAAGTACAGTACGGAGTCATG************************************** T37-m0193-5p 54 ---------TTTAAGTACAGTACGGAGTCA---------------------------------------- t0157626 6 ---------TTTAAGTACAGTACGGAGTCAT--------------------------------------- t0057881 14 ----------TTAAGTACAGTACGGAGTCAT--------------------------------------- t2367919 1 ----------TTAAGTACAGTACGGAGTCATG-------------------------------------- t0022747 32 -----------TAAGTACAGTACGGAGTCATG-------------------------------------- t1194365 1 // T37-m0227 scaffold282.0:137092:137161:- 70(nt) -21.10(kcal/mol) GAGTAAGGCTTTAAGTACAGTACGGAGTCATGTGAGCTTCCTTCATACTGTGTCTTGATAGTGCTTGCAA T37-m0227 54 ..((((((((((((((((((((.((((....(....)...)))).))))))).))))).))).))))).. **********TTAAGTACAGTACGGAGTCATG************************************** T37-m0227-5p 54 ---------TTTAAGTACAGTACGGAGTCA---------------------------------------- t0157626 6 ---------TTTAAGTACAGTACGGAGTCAT--------------------------------------- t0057881 14 ----------TTAAGTACAGTACGGAGTCAT--------------------------------------- t2367919 1 ----------TTAAGTACAGTACGGAGTCATG-------------------------------------- t0022747 32 novel186 T24-m0226 scaffold299.0:354790:354870:- 81(nt) -33.10(kcal/mol) GGGGCGTTTCGGGCACTTCTTCTGCATCATCTGCTCTCTCATGATCGGGTGTAGAGTGTAGAGGGGTGCTATTCATGTGCA T24-m0226 54 .(.((((....((((((.(((((((((..(((((.(((........))).))))))))))))))))))))....)))).). ************************************************GTGTAGAGTGTAGAGGGGTGCTA********** T24-m0226-3p 53 ------------------------------------------------GTGTAGAGTGTAGAGGGGTGCTA---------- t0027031 37 -------------------------------------------------TGTAGAGTGTAGAGGGGTGCTA---------- t0273806 5 --------------------------------------------------GTAGAGTGTAGAGGGGTGCTA---------- t0175784 8 ---------------------------------------------------TAGAGTGTAGAGGGGTGCTA---------- t0505678 3 ----------------------------------------------------AGAGTGTAGAGGGGTGCTATTCAT----- t2904293 1 // T24-m0310 scaffold447.0:179360:179440:- 81(nt) -33.10(kcal/mol) GGGGCGTTTCGGGCACTTCTTCTGCATCATCTGCTCTCTCATGATCGGGTGTAGAGTGTAGAGGGGTGCTATTCATGTGCA T24-m0310 61 .(.((((....((((((.(((((((((..(((((.(((........))).))))))))))))))))))))....)))).). ************************************************GTGTAGAGTGTAGAGGGGTGCTA********** T24-m0310-3p 60 ---------------------------------------------CGGGTGTAGAGTGTAGAGGGGTGC------------ t0256834 6 ---------------------------------------------CGGGTGTAGAGTGTAGAGGGGTGCT----------- t4504642 1 ------------------------------------------------GTGTAGAGTGTAGAGGGGTGCTA---------- t0027031 37 -------------------------------------------------TGTAGAGTGTAGAGGGGTGCTA---------- t0273806 5 --------------------------------------------------GTAGAGTGTAGAGGGGTGCTA---------- t0175784 8 ---------------------------------------------------TAGAGTGTAGAGGGGTGCTA---------- t0505678 3 ----------------------------------------------------AGAGTGTAGAGGGGTGCTATTCAT----- t2904293 1 // T37-m0236 scaffold299.0:354790:354870:- 81(nt) -33.10(kcal/mol) GGGGCGTTTCGGGCACTTCTTCTGCATCATCTGCTCTCTCATGATCGGGTGTAGAGTGTAGAGGGGTGCTATTCATGTGCA T37-m0236 60 .(.((((....((((((.(((((((((..(((((.(((........))).))))))))))))))))))))....)))).). ************************************************GTGTAGAGTGTAGAGGGGTGCTA********** T37-m0236-3p 60 ------------------------------------------------GTGTAGAGTGTAGAGGGGTGCTA---------- t0023197 31 ------------------------------------------------GTGTAGAGTGTAGAGGGGTGCTAT--------- t0576350 2 -------------------------------------------------TGTAGAGTGTAGAGGGGTGCTA---------- t0235915 4 --------------------------------------------------GTAGAGTGTAGAGGGGTGCTA---------- t0040482 19 ---------------------------------------------------TAGAGTGTAGAGGGGTGCTA---------- t0250013 4 // T37-m0345 scaffold447.0:179360:179440:- 81(nt) -33.10(kcal/mol) GGGGCGTTTCGGGCACTTCTTCTGCATCATCTGCTCTCTCATGATCGGGTGTAGAGTGTAGAGGGGTGCTATTCATGTGCA T37-m0345 63 .(.((((....((((((.(((((((((..(((((.(((........))).))))))))))))))))))))....)))).). ************************************************GTGTAGAGTGTAGAGGGGTGCTA********** T37-m0345-3p 63 ---------------------------------------------CGGGTGTAGAGTGTAGAGGGGTGC------------ t0753123 2 ---------------------------------------------CGGGTGTAGAGTGTAGAGGGGTGCT----------- t2461258 1 ------------------------------------------------GTGTAGAGTGTAGAGGGGTGCTA---------- t0023197 31 ------------------------------------------------GTGTAGAGTGTAGAGGGGTGCTAT--------- t0576350 2 -------------------------------------------------TGTAGAGTGTAGAGGGGTGCTA---------- t0235915 4 --------------------------------------------------GTAGAGTGTAGAGGGGTGCTA---------- t0040482 19 ---------------------------------------------------TAGAGTGTAGAGGGGTGCTA---------- t0250013 4 novel189 T24-m0229 scaffold3.0:2868101:2868208:- 108(nt) -50.50(kcal/mol) CTTAGGGTAGAAATTGACAGAAGAGAGTGAGCACACAGAGGCACTTGCCATAAAGCGTATGCCATTGCTTTTGCGTGCTCATGTCTCTTTCTGTCAGCTTCCCCATTT T24-m0229 36 ....(((..(((.(((((((((((((((((((((.((((((((..((.((((.....)))).)).)))))))).)))))))).)))).))))))))).)))))).... ****************************************************************************GCTCATGTCTCTTTCTGTCAGC********** T24-m0229-3p 36 --------------------------------------------------------------------------GTGCTCATGTCTCTTTCTGTCA------------ t0594899 3 ---------------------------------------------------------------------------TGCTCATGTCTCTTTCTGTCA------------ t2818295 1 ---------------------------------------------------------------------------TGCTCATGTCTCTTTCTGTCAGC---------- t0640639 3 ----------------------------------------------------------------------------GCTCATGTCTCTTTCTGTCAGC---------- t0037409 28 ------------------------------------------------------------------------------TCATGTCTCTTTCTGTCAGC---------- t2355903 1 // T37-m0241 scaffold3.0:2868101:2868208:- 108(nt) -50.50(kcal/mol) CTTAGGGTAGAAATTGACAGAAGAGAGTGAGCACACAGAGGCACTTGCCATAAAGCGTATGCCATTGCTTTTGCGTGCTCATGTCTCTTTCTGTCAGCTTCCCCATTT T37-m0241 28 ....(((..(((.(((((((((((((((((((((.((((((((..((.((((.....)))).)).)))))))).)))))))).)))).))))))))).)))))).... ****************************************************************************GCTCATGTCTCTTTCTGTCAGC********** T37-m0241-3p 28 -------------------------------------------------------------------------CGTGCTCATGTCTCTTTCTGTCA------------ t1943696 1 --------------------------------------------------------------------------GTGCTCATGTCTCTTTCTGTCA------------ t0582022 2 ---------------------------------------------------------------------------TGCTCATGTCTCTTTCTGTCA------------ t3131209 1 ---------------------------------------------------------------------------TGCTCATGTCTCTTTCTGTCAGC---------- t0160427 6 ----------------------------------------------------------------------------GCTCATGTCTCTTTCTGTCAG----------- t2077727 1 ----------------------------------------------------------------------------GCTCATGTCTCTTTCTGTCAGC---------- t0049254 16 ----------------------------------------------------------------------------GCTCATGTCTCTTTCTGTCAGCT--------- t3422962 1 novel211 T24-m0258 scaffold351.0:13145:13253:- 109(nt) -21.59(kcal/mol) CTGAGATGATAGTTCATGGACTAAATCGGCACTTCAACCTATTTATTATTATGAGTTAGTAAGGGTTCAATTAATAACTGATTTATTTTATGTTATCTGTGAATTTCTA T24-m0258 109 ..(((((.((((..((((((.((((((((......(((((..((((((........)))))))))))..........)))))))).))))))....))))..))))).. **********AGTTCATGGACTAAATCGGCACT**************************************************************************** T24-m0258-5p 109 --------ATAGTTCATGGACTAAATCGGCAC----------------------------------------------------------------------------- t0806403 2 ---------TAGTTCATGGACTAAATCGGC------------------------------------------------------------------------------- t4122954 1 ---------TAGTTCATGGACTAAATCGGCACT---------------------------------------------------------------------------- t3000816 1 ----------AGTTCATGGACTAAATCGGCAC----------------------------------------------------------------------------- t0311577 5 ----------AGTTCATGGACTAAATCGGCACT---------------------------------------------------------------------------- t0011820 72 ----------AGTTCATGGACTAAATCGGCACTT--------------------------------------------------------------------------- t0048854 23 ----------AGTTCATGGACTAAATCGGCACTTC-------------------------------------------------------------------------- t3542526 1 -----------GTTCATGGACTAAATCGGCACTTC-------------------------------------------------------------------------- t5417960 1 -------------TCATGGACTAAATCGGCACTT--------------------------------------------------------------------------- t2552116 1 -------------TCATGGACTAAATCGGCACTTCA------------------------------------------------------------------------- t0674508 2 // T37-m0279 scaffold351.0:13145:13253:- 109(nt) -21.59(kcal/mol) CTGAGATGATAGTTCATGGACTAAATCGGCACTTCAACCTATTTATTATTATGAGTTAGTAAGGGTTCAATTAATAACTGATTTATTTTATGTTATCTGTGAATTTCTA T37-m0279 81 ..(((((.((((..((((((.((((((((......(((((..((((((........)))))))))))..........)))))))).))))))....))))..))))).. **********AGTTCATGGACTAAATCGGCACT**************************************************************************** T37-m0279-5p 78 ------TGATAGTTCATGGACTAAATCGGC------------------------------------------------------------------------------- t0813598 2 ---------TAGTTCATGGACTAAATCGGC------------------------------------------------------------------------------- t1896333 1 ----------AGTTCATGGACTAAATCGGCAC----------------------------------------------------------------------------- t2392643 1 ----------AGTTCATGGACTAAATCGGCACT---------------------------------------------------------------------------- t0014062 49 ----------AGTTCATGGACTAAATCGGCACTT--------------------------------------------------------------------------- t0029683 25 -------------TCATGGACTAAATCGGCACTT--------------------------------------------------------------------------- t2739369 1 -------------TCATGGACTAAATCGGCACTTCA------------------------------------------------------------------------- t0986056 1 ---------------ATGGACTAAATCGGCACTTCA------------------------------------------------------------------------- t3257158 1 // novel218 T24-m0267 scaffold367.0:389501:389757:- 257(nt) -96.60(kcal/mol) GGTAACAATGTGTTTGAGGAAATTGAGACGTTACAACACGGTTGAAAAAGAAAATAAACATGACGAAGAAACAGGATTGCGAGGGACATTTTGAACAATTGCTCGTAAAAAGGCTTCTAACCCCTTCCTCAATTGTGACCTGTATCGCGGGTCAACTGGTCACAATGCCTCCTTCAATCCTTTTTTTTTTTCATCATGATTCTTTTCATTTTCGGCTGTCATGTACCCTCTCAAGTTCCTCAAACAGATTGATACCA T24-m0267 42 ((((.((((.(((((((((((.((((((.(.((((..(((((((((((.(((((.((.(((((.(((((((.(((((((.(((((.((((.(((.((...(((........))).....................(((((((.....)))))))..)).))).)))).).)))))))))))....))))))).))))).)).))))).)))))))))))..)))).).)))))).))))))))))).)))).)))). **********TGTTTGAGGAAATTGAGACGTT********************************************************************************************************************************************************************************************************************************* T24-m0267-5p 42 ----------TGTTTGAGGAAATTGAGACGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------TGTTTGAGGAAATTGAGACGTTAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------TTGAGGAAATTGAGACGTTACAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // T24-m0388 scaffold620.0:192125:192381:+ 257(nt) -99.75(kcal/mol) GGTAACAATGTGTTTGAGGAAATTGAGACGTTACAACACGGTTGAAAAAGAAAATAAACATGACGAAGAAACAGGATTGCGAGGGACATTTTGAACAATTGCTCGTAAAAAGGCTTCTAACCCCTTCCTCAATTGTGACCTTTATCGCGGGTCAATTGGTCACAATGCCTCCTTCAATCCTTTTTTTTTTTCATCATGATTCTTTTCATTTTCGGCTGTCATGTACCCTCTCAAGTTCCTCAAACAGATTGATACCA T24-m0388 42 ((((.((((.(((((((((((.((((((.(.((((..(((((((((((.(((((.((.(((((.(((((((.(((((((.(((((.((((.(((.(((((((((((..((((((......................).)))))...))))).)))))).))).)))).).)))))))))))....))))))).))))).)).))))).)))))))))))..)))).).)))))).))))))))))).)))).)))). **********TGTTTGAGGAAATTGAGACGTT********************************************************************************************************************************************************************************************************************************* T24-m0388-5p 42 ----------TGTTTGAGGAAATTGAGACGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------TGTTTGAGGAAATTGAGACGTTAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------TTGAGGAAATTGAGACGTTACAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // T37-m0290 scaffold367.0:389501:389757:- 257(nt) -96.60(kcal/mol) GGTAACAATGTGTTTGAGGAAATTGAGACGTTACAACACGGTTGAAAAAGAAAATAAACATGACGAAGAAACAGGATTGCGAGGGACATTTTGAACAATTGCTCGTAAAAAGGCTTCTAACCCCTTCCTCAATTGTGACCTGTATCGCGGGTCAACTGGTCACAATGCCTCCTTCAATCCTTTTTTTTTTTCATCATGATTCTTTTCATTTTCGGCTGTCATGTACCCTCTCAAGTTCCTCAAACAGATTGATACCA T37-m0290 47 ((((.((((.(((((((((((.((((((.(.((((..(((((((((((.(((((.((.(((((.(((((((.(((((((.(((((.((((.(((.((...(((........))).....................(((((((.....)))))))..)).))).)))).).)))))))))))....))))))).))))).)).))))).)))))))))))..)))).).)))))).))))))))))).)))).)))). **********TGTTTGAGGAAATTGAGACGTT********************************************************************************************************************************************************************************************************************************* T37-m0290-5p 47 ----------TGTTTGAGGAAATTGAGACGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------TGTTTGAGGAAATTGAGACGTTAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // T37-m0415 scaffold620.0:192125:192381:+ 257(nt) -99.75(kcal/mol) GGTAACAATGTGTTTGAGGAAATTGAGACGTTACAACACGGTTGAAAAAGAAAATAAACATGACGAAGAAACAGGATTGCGAGGGACATTTTGAACAATTGCTCGTAAAAAGGCTTCTAACCCCTTCCTCAATTGTGACCTTTATCGCGGGTCAATTGGTCACAATGCCTCCTTCAATCCTTTTTTTTTTTCATCATGATTCTTTTCATTTTCGGCTGTCATGTACCCTCTCAAGTTCCTCAAACAGATTGATACCA T37-m0415 47 ((((.((((.(((((((((((.((((((.(.((((..(((((((((((.(((((.((.(((((.(((((((.(((((((.(((((.((((.(((.(((((((((((..((((((......................).)))))...))))).)))))).))).)))).).)))))))))))....))))))).))))).)).))))).)))))))))))..)))).).)))))).))))))))))).)))).)))). **********TGTTTGAGGAAATTGAGACGTT********************************************************************************************************************************************************************************************************************************* T37-m0415-5p 47 ----------TGTTTGAGGAAATTGAGACGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------TGTTTGAGGAAATTGAGACGTTAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // novel218 T24-m0267 scaffold367.0:389501:389757:- 257(nt) -96.60(kcal/mol) GGTAACAATGTGTTTGAGGAAATTGAGACGTTACAACACGGTTGAAAAAGAAAATAAACATGACGAAGAAACAGGATTGCGAGGGACATTTTGAACAATTGCTCGTAAAAAGGCTTCTAACCCCTTCCTCAATTGTGACCTGTATCGCGGGTCAACTGGTCACAATGCCTCCTTCAATCCTTTTTTTTTTTCATCATGATTCTTTTCATTTTCGGCTGTCATGTACCCTCTCAAGTTCCTCAAACAGATTGATACCA T24-m0267 42 ((((.((((.(((((((((((.((((((.(.((((..(((((((((((.(((((.((.(((((.(((((((.(((((((.(((((.((((.(((.((...(((........))).....................(((((((.....)))))))..)).))).)))).).)))))))))))....))))))).))))).)).))))).)))))))))))..)))).).)))))).))))))))))).)))).)))). **********TGTTTGAGGAAATTGAGACGTT********************************************************************************************************************************************************************************************************************************* T24-m0267-5p 42 ----------TGTTTGAGGAAATTGAGACGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------TGTTTGAGGAAATTGAGACGTTAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------TTGAGGAAATTGAGACGTTACAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // T24-m0388 scaffold620.0:192125:192381:+ 257(nt) -99.75(kcal/mol) GGTAACAATGTGTTTGAGGAAATTGAGACGTTACAACACGGTTGAAAAAGAAAATAAACATGACGAAGAAACAGGATTGCGAGGGACATTTTGAACAATTGCTCGTAAAAAGGCTTCTAACCCCTTCCTCAATTGTGACCTTTATCGCGGGTCAATTGGTCACAATGCCTCCTTCAATCCTTTTTTTTTTTCATCATGATTCTTTTCATTTTCGGCTGTCATGTACCCTCTCAAGTTCCTCAAACAGATTGATACCA T24-m0388 42 ((((.((((.(((((((((((.((((((.(.((((..(((((((((((.(((((.((.(((((.(((((((.(((((((.(((((.((((.(((.(((((((((((..((((((......................).)))))...))))).)))))).))).)))).).)))))))))))....))))))).))))).)).))))).)))))))))))..)))).).)))))).))))))))))).)))).)))). **********TGTTTGAGGAAATTGAGACGTT********************************************************************************************************************************************************************************************************************************* T24-m0388-5p 42 ----------TGTTTGAGGAAATTGAGACGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------TGTTTGAGGAAATTGAGACGTTAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------TTGAGGAAATTGAGACGTTACAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // T37-m0290 scaffold367.0:389501:389757:- 257(nt) -96.60(kcal/mol) GGTAACAATGTGTTTGAGGAAATTGAGACGTTACAACACGGTTGAAAAAGAAAATAAACATGACGAAGAAACAGGATTGCGAGGGACATTTTGAACAATTGCTCGTAAAAAGGCTTCTAACCCCTTCCTCAATTGTGACCTGTATCGCGGGTCAACTGGTCACAATGCCTCCTTCAATCCTTTTTTTTTTTCATCATGATTCTTTTCATTTTCGGCTGTCATGTACCCTCTCAAGTTCCTCAAACAGATTGATACCA T37-m0290 47 ((((.((((.(((((((((((.((((((.(.((((..(((((((((((.(((((.((.(((((.(((((((.(((((((.(((((.((((.(((.((...(((........))).....................(((((((.....)))))))..)).))).)))).).)))))))))))....))))))).))))).)).))))).)))))))))))..)))).).)))))).))))))))))).)))).)))). **********TGTTTGAGGAAATTGAGACGTT********************************************************************************************************************************************************************************************************************************* T37-m0290-5p 47 ----------TGTTTGAGGAAATTGAGACGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------TGTTTGAGGAAATTGAGACGTTAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // T37-m0415 scaffold620.0:192125:192381:+ 257(nt) -99.75(kcal/mol) GGTAACAATGTGTTTGAGGAAATTGAGACGTTACAACACGGTTGAAAAAGAAAATAAACATGACGAAGAAACAGGATTGCGAGGGACATTTTGAACAATTGCTCGTAAAAAGGCTTCTAACCCCTTCCTCAATTGTGACCTTTATCGCGGGTCAATTGGTCACAATGCCTCCTTCAATCCTTTTTTTTTTTCATCATGATTCTTTTCATTTTCGGCTGTCATGTACCCTCTCAAGTTCCTCAAACAGATTGATACCA T37-m0415 47 ((((.((((.(((((((((((.((((((.(.((((..(((((((((((.(((((.((.(((((.(((((((.(((((((.(((((.((((.(((.(((((((((((..((((((......................).)))))...))))).)))))).))).)))).).)))))))))))....))))))).))))).)).))))).)))))))))))..)))).).)))))).))))))))))).)))).)))). **********TGTTTGAGGAAATTGAGACGTT********************************************************************************************************************************************************************************************************************************* T37-m0415-5p 47 ----------TGTTTGAGGAAATTGAGACGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TGTTTGAGGAAATTGAGACGTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------TGTTTGAGGAAATTGAGACGTTAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // novel22 T24-m0022 scaffold1086.0:87127:87318:+ 192(nt) -95.30(kcal/mol) TTATACTTTTCGACAAGACGAAGAGAATGGTATCTTTTTTTAATTGTTAACTCGTTGTGGTTTGGCCGAAAAACTGCTGGAAAGTGTCAACCTAAAAATTGTTTAGCTTTTTTCGAGCCGTTTTTTGACCAAACCAGGGCGAGTTAGCCTTCAAAAAAGGTACCATTCTCTTCATCTTGTCAAGAAGTATTA T24-m0022 46 ..((((((((.(((((((.(((((((((((((((((((((.....(((((((((((.((((((((.((((((((.(((.(((((.......(((((.....)))))...))))).))).)))))))).)))))))).)))))))))))....))))))))))))))))))))).))))))).)))))))).. **********CGACAAGACGAAGAGAATGGTA**************************************************************************************************************************************************************** T24-m0022-5p 46 ---------TCGACAAGACGAAGAGAATGG------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0615838 3 ----------CGACAAGACGAAGAGAATGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------- t3632585 1 ----------CGACAAGACGAAGAGAATGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0032434 32 ----------CGACAAGACGAAGAGAATGGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t5090456 1 -----------GACAAGACGAAGAGAATGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------- t3450456 1 -----------GACAAGACGAAGAGAATGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------- t4805476 1 ------------ACAAGACGAAGAGAATGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0396619 4 ------------ACAAGACGAAGAGAATGGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0934500 2 -------------CAAGACGAAGAGAATGGTATC-------------------------------------------------------------------------------------------------------------------------------------------------------------- t3209639 1 // T24-m0412 scaffold684.0:171920:172116:- 197(nt) -92.50(kcal/mol) ATATACTCATCGACAAGACGAAGAGAATGGTATCTTTATTTACTGCTAACTCGCTGTGGTTTGGCCGAAAACTGCTTGAAAGTGGCTAACTCAAAAATGGTTAGCCACTTAGCCACTTTCGAGCCGTTGTCCAACCAAACCAAGGTGAGTTAGCCTTCGAAAAAGTACCATTCTCTTTGTCTCATCAAAAAGTATTA T24-m0412 47 ..(((((....((..(((((((((((((((((.((((.((....(((((((((((.((((((((..((.(((.((((((((((((((((........(((....))).)))))))))))))))).))).))...)))))))).)))))))))))....)).)))))))))))))))))))))..))....))))).. **********CGACAAGACGAAGAGAATGGTA********************************************************************************************************************************************************************* T24-m0412-5p 46 ---------TCGACAAGACGAAGAGAATGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0615838 3 ----------CGACAAGACGAAGAGAATGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3632585 1 ----------CGACAAGACGAAGAGAATGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0032434 32 ----------CGACAAGACGAAGAGAATGGTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t5090456 1 -----------GACAAGACGAAGAGAATGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3450456 1 -----------GACAAGACGAAGAGAATGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t4805476 1 ------------ACAAGACGAAGAGAATGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0396619 4 ------------ACAAGACGAAGAGAATGGTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0934500 2 -------------CAAGACGAAGAGAATGGTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3209639 1 --------------------------------------------------------------------------------------------------------------AGCCACTTTCGAGCCGTTGTCCAA--------------------------------------------------------------- t3854645 1 // T37-m0023 scaffold1086.0:87127:87318:+ 192(nt) -95.30(kcal/mol) TTATACTTTTCGACAAGACGAAGAGAATGGTATCTTTTTTTAATTGTTAACTCGTTGTGGTTTGGCCGAAAAACTGCTGGAAAGTGTCAACCTAAAAATTGTTTAGCTTTTTTCGAGCCGTTTTTTGACCAAACCAGGGCGAGTTAGCCTTCAAAAAAGGTACCATTCTCTTCATCTTGTCAAGAAGTATTA T37-m0023 39 ..((((((((.(((((((.(((((((((((((((((((((.....(((((((((((.((((((((.((((((((.(((.(((((.......(((((.....)))))...))))).))).)))))))).)))))))).)))))))))))....))))))))))))))))))))).))))))).)))))))).. **********CGACAAGACGAAGAGAATGGTA**************************************************************************************************************************************************************** T37-m0023-5p 39 ---------TCGACAAGACGAAGAGAATGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------- t2775188 1 ----------CGACAAGACGAAGAGAATGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0028332 26 -----------GACAAGACGAAGAGAATGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------- t0904608 1 -----------GACAAGACGAAGAGAATGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------- t2904675 1 ------------ACAAGACGAAGAGAATGGTA---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0501953 2 ------------ACAAGACGAAGAGAATGGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0409887 3 ------------ACAAGACGAAGAGAATGGTATCTT------------------------------------------------------------------------------------------------------------------------------------------------------------ t0730304 2 -------------CAAGACGAAGAGAATGGTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------- t3280731 1 -------------CAAGACGAAGAGAATGGTATC-------------------------------------------------------------------------------------------------------------------------------------------------------------- t0781578 2 // T37-m0442 scaffold684.0:171920:172116:- 197(nt) -92.50(kcal/mol) ATATACTCATCGACAAGACGAAGAGAATGGTATCTTTATTTACTGCTAACTCGCTGTGGTTTGGCCGAAAACTGCTTGAAAGTGGCTAACTCAAAAATGGTTAGCCACTTAGCCACTTTCGAGCCGTTGTCCAACCAAACCAAGGTGAGTTAGCCTTCGAAAAAGTACCATTCTCTTTGTCTCATCAAAAAGTATTA T37-m0442 40 ..(((((....((..(((((((((((((((((.((((.((....(((((((((((.((((((((..((.(((.((((((((((((((((........(((....))).)))))))))))))))).))).))...)))))))).)))))))))))....)).)))))))))))))))))))))..))....))))).. **********CGACAAGACGAAGAGAATGGTA********************************************************************************************************************************************************************* T37-m0442-5p 39 ---------TCGACAAGACGAAGAGAATGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2775188 1 ----------CGACAAGACGAAGAGAATGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0028332 26 -----------GACAAGACGAAGAGAATGGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0904608 1 -----------GACAAGACGAAGAGAATGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t2904675 1 ------------ACAAGACGAAGAGAATGGTA--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0501953 2 ------------ACAAGACGAAGAGAATGGTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0409887 3 ------------ACAAGACGAAGAGAATGGTATCTT----------------------------------------------------------------------------------------------------------------------------------------------------------------- t0730304 2 -------------CAAGACGAAGAGAATGGTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3280731 1 -------------CAAGACGAAGAGAATGGTATC------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0781578 2 -------------------------------------------------------------------AAAACTGCTTGAAAGTGGCTAACT---------------------------------------------------------------------------------------------------------- t1553839 1 // novel222 T24-m0273 scaffold384.0:240454:240742:- 289(nt) -66.06(kcal/mol) ATCTATTTTCAGGGACGACATTGATTGATTTTAAATTTTAGGAACAATCTTGATGACACAAGTCAATTTCAAAGATCATTTATGATATAAACCCTTAATTTTATTTAAAGGTAAAATTAAAGGTAGGCCTTCATCATTTTAGGTGCCCAATTTGTTCTCTAACGAAATGCTATCATAGCTGGAAGAATCTCAGTTGTGTATAGATAAGACGTCAACCTTAACCTCATACCTGCCTTATTCTTGTGTGCTTCGAGAAAAATCTGTGTTGAGTTGCTCTCCCGAGATAGAC T24-m0273 61 .((((((((..((((((((.(..((.((((((...............((((((.((((((((............((((....))))....(((.((((......)))).))).......((((((((.............((((......((((((....))))))...((((((((((((((....)).)))))))).))))...........))))..........))))))))...))))))).).))))))))))))...))..))))).))))..)))))))). **********AGGGACGACATTGATTGATTTTA**************************************************************************************************************************************************************************************************************************************************************** T24-m0273-5p 59 --CTATTTTCAGGGACGACATTGATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----TTTTCAGGGACGACATTGATTGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------TTCAGGGACGACATTGATTGATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------TCAGGGACGACATTGATTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------TCAGGGACGACATTGATTGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------TCAGGGACGACATTGATTGATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------TCAGGGACGACATTGATTGATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------TCAGGGACGACATTGATTGATTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------CAGGGACGACATTGATTGATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------AGGGACGACATTGATTGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------AGGGACGACATTGATTGATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------AGGGACGACATTGATTGATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------AGGGACGACATTGATTGATTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------AGGGACGACATTGATTGATTTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------AGGGACGACATTGATTGATTTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------GGGACGACATTGATTGATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------GGGACGACATTGATTGATTTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ // T37-m0303 scaffold384.0:240454:240742:- 289(nt) -66.06(kcal/mol) ATCTATTTTCAGGGACGACATTGATTGATTTTAAATTTTAGGAACAATCTTGATGACACAAGTCAATTTCAAAGATCATTTATGATATAAACCCTTAATTTTATTTAAAGGTAAAATTAAAGGTAGGCCTTCATCATTTTAGGTGCCCAATTTGTTCTCTAACGAAATGCTATCATAGCTGGAAGAATCTCAGTTGTGTATAGATAAGACGTCAACCTTAACCTCATACCTGCCTTATTCTTGTGTGCTTCGAGAAAAATCTGTGTTGAGTTGCTCTCCCGAGATAGAC T37-m0303 33 .((((((((..((((((((.(..((.((((((...............((((((.((((((((............((((....))))....(((.((((......)))).))).......((((((((.............((((......((((((....))))))...((((((((((((((....)).)))))))).))))...........))))..........))))))))...))))))).).))))))))))))...))..))))).))))..)))))))). **********AGGGACGACATTGATTGATTTTA**************************************************************************************************************************************************************************************************************************************************************** T37-m0303-5p 32 -----TTTTCAGGGACGACATTGATTGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------TTCAGGGACGACATTGATTGATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------TCAGGGACGACATTGATTGATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------AGGGACGACATTGATTGATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------AGGGACGACATTGATTGATTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------AGGGACGACATTGATTGATTTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------AGGGACGACATTGATTGATTTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------AGGGACGACATTGATTGATTTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------GGGACGACATTGATTGATTTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // novel225 T24-m0276 scaffold39.0:876295:876501:- 207(nt) -70.00(kcal/mol) ACATCTTAGGTGGCATTTGATATGAACAGCCACATCATTTGAATTAATCAGATTTTTAAATTTAATTATTATTTAATAAAAAATAATTAAGAAAAATTAGTTAATTAAATGATGATTGTCGTATACGAGGAGTTTTCCTCCTTTCTTTCTTTGGGTTTTGCAAATTTTAATGATGTGACTGTCCACATCAGATGTCACCTAAGGTAG T24-m0276 97 ..(((((((((((((((((((.((.((((.(((((((((.(((((...((((..((((((..(((((((((((((((......(((((((......))))))))))))))))))))))........((((((.....))))))......)))))).))))..))))).))))))))).)))).)).))))))))))))))))))).. ******************************************************************************************************************************************************************************GTGACTGTCCACATCAGATGTCA********** T24-m0276-3p 96 -------------------ATATGAACAGCCACATCATTTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t5205987 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GATGTGACTGTCCACATCAGATGT------------ t3032722 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGACTGTCCACATCAGATGT------------ t0255675 6 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGACTGTCCACATCAGATGTC----------- t0075495 16 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGACTGTCCACATCAGATGTCA---------- t0157104 8 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGACTGTCCACATCAGATGTC----------- t0937298 2 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGACTGTCCACATCAGATGTCA---------- t0704537 2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGACTGTCCACATCAGATGTCA---------- t0015935 57 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACTGTCCACATCAGATGTC----------- t4180265 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACTGTCCACATCAGATGTCA---------- t1556133 1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACTGTCCACATCAGATGTCACC-------- t4391286 1 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTCCACATCAGATGTCACCTA------ t3886956 1 // T37-m0079 scaffold140.0:539877:539981:- 105(nt) -40.10(kcal/mol) TCATTTAGGTATCATTTGATGTGGACAACCATATCATTTGAAAAATTTGTAAAACTGATTAATTCAAATAATGTGACTGTCCACATCAGATGTCATCTAAGATGG T37-m0079 106 .(((((((((..(((((((((((((((..(((((.(((((((.((((.(.....).))))..))))))).)))))..)))))))))))))))..)))).))))). ************************************************************************GTGACTGTCCACATCAGATGTCA********** T37-m0079-3p 102 ---------------------------------------------------------ATTAATTCAAATAATGTGACTGTC------------------------ t3198451 1 ------------------------------------------------------------------AATAATGTGACTGTCCACATCAGA--------------- t2383164 1 ---------------------------------------------------------------------AATGTGACTGTCCACATCAGATGT------------ t2431368 1 ----------------------------------------------------------------------ATGTGACTGTCCACATCAGAT-------------- t3566607 1 ----------------------------------------------------------------------ATGTGACTGTCCACATCAGATGT------------ t0734117 2 ----------------------------------------------------------------------ATGTGACTGTCCACATCAGATGTC----------- t0040166 19 ----------------------------------------------------------------------ATGTGACTGTCCACATCAGATGTCA---------- t0287056 3 -----------------------------------------------------------------------TGTGACTGTCCACATCAGATGTCA---------- t0480478 2 -----------------------------------------------------------------------TGTGACTGTCCACATCAGATGTCAT--------- t3383716 1 ------------------------------------------------------------------------GTGACTGTCCACATCAGATG------------- t2533870 1 ------------------------------------------------------------------------GTGACTGTCCACATCAGATGTCA---------- t0009243 70 ------------------------------------------------------------------------GTGACTGTCCACATCAGATGTCAT--------- t0619635 2 ------------------------------------------------------------------------------GTCCACATCAGATGTCATCTA------ t3363907 1 -------------------------------------------------------------------------------TCCACATCAGATGTCATCTAAGAT-- t2736583 1 // T37-m0307 scaffold39.0:876295:876501:- 207(nt) -70.00(kcal/mol) ACATCTTAGGTGGCATTTGATATGAACAGCCACATCATTTGAATTAATCAGATTTTTAAATTTAATTATTATTTAATAAAAAATAATTAAGAAAAATTAGTTAATTAAATGATGATTGTCGTATACGAGGAGTTTTCCTCCTTTCTTTCTTTGGGTTTTGCAAATTTTAATGATGTGACTGTCCACATCAGATGTCACCTAAGGTAG T37-m0307 102 ..(((((((((((((((((((.((.((((.(((((((((.(((((...((((..((((((..(((((((((((((((......(((((((......))))))))))))))))))))))........((((((.....))))))......)))))).))))..))))).))))))))).)))).)).))))))))))))))))))).. ******************************************************************************************************************************************************************************GTGACTGTCCACATCAGATGTCA********** T37-m0307-3p 99 ------TAGGTGGCATTTGATATGAACAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1264968 1 -------AGGTGGCATTTGATATGAACAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1735830 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGACTGTCCACATCAGAT-------------- t3566607 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGACTGTCCACATCAGATGT------------ t0734117 2 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGACTGTCCACATCAGATGTC----------- t0040166 19 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGTGACTGTCCACATCAGATGTCA---------- t0287056 3 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTGACTGTCCACATCAGATGTCA---------- t0480478 2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGACTGTCCACATCAGATG------------- t2533870 1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGACTGTCCACATCAGATGTCA---------- t0009243 70 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGTCCACATCAGATGTCACCTA------ t1548796 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTCCACATCAGATGTCACC-------- t2387728 1 // novel226 T24-m0277 scaffold390.0:276680:276962:- 283(nt) -69.50(kcal/mol) TGGAATGGTTTATGGGATATTAGGGTGATGGAATGGATGCACGGATTATGGGAGAAAATAAATCAGATGCTAGGGTGTTTTAAAAGGGTGCGGCTTTGTATGTAAAACCTAGGGTTTGAAATATGTTTTGTTCCAGAAATTAACCCTAGCTTATTTTTATTAACTAAAATTAAATTAAAGGCTGCTAGAATAAGGGAAATTAAAACATAAATATAAAGGTGCGGCTAGGAAGGGAAATAGGGCTAGGGCCTTGGTTTTGTGTCCTAAAGTGCCTATAAGGCCG T24-m0277 38 ......((((((((((((.(((((((.(..((((.((......((((.(((((.((((((..((((((.(((((..........((((.....))))..........))))).))))))....)))))).)))))..))))..(((((((((((((((.((((......))))......((((((...................................))))))......))))))).))))))))..)).))))..)))))))).)).))))))).))). **********TATGGGATATTAGGGTGATGGA*********************************************************************************************************************************************************************************************************************************************************** T24-m0277-5p 38 ---------TTATGGGATATTAGGGTGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------TTATGGGATATTAGGGTGATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------TTATGGGATATTAGGGTGATGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------TTATGGGATATTAGGGTGATGGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------TATGGGATATTAGGGTGATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TATGGGATATTAGGGTGATGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TATGGGATATTAGGGTGATGGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------ATGGGATATTAGGGTGATGGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------TGGGATATTAGGGTGATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // T37-m0308 scaffold390.0:276680:276962:- 283(nt) -69.50(kcal/mol) TGGAATGGTTTATGGGATATTAGGGTGATGGAATGGATGCACGGATTATGGGAGAAAATAAATCAGATGCTAGGGTGTTTTAAAAGGGTGCGGCTTTGTATGTAAAACCTAGGGTTTGAAATATGTTTTGTTCCAGAAATTAACCCTAGCTTATTTTTATTAACTAAAATTAAATTAAAGGCTGCTAGAATAAGGGAAATTAAAACATAAATATAAAGGTGCGGCTAGGAAGGGAAATAGGGCTAGGGCCTTGGTTTTGTGTCCTAAAGTGCCTATAAGGCCG T37-m0308 34 ......((((((((((((.(((((((.(..((((.((......((((.(((((.((((((..((((((.(((((..........((((.....))))..........))))).))))))....)))))).)))))..))))..(((((((((((((((.((((......))))......((((((...................................))))))......))))))).))))))))..)).))))..)))))))).)).))))))).))). **********TATGGGATATTAGGGTGATGGA*********************************************************************************************************************************************************************************************************************************************************** T37-m0308-5p 33 ---------TTATGGGATATTAGGGTGAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------TTATGGGATATTAGGGTGATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TATGGGATATTAGGGTGATGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TATGGGATATTAGGGTGATGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------TATGGGATATTAGGGTGATGGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ -----------ATGGGATATTAGGGTGATGGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------TGGGATATTAGGGTGATGGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ---------------------------------TGGATGCACGGATTATGGGAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ novel253 T24-m0314 scaffold457.0:134220:134412:- 193(nt) -63.60(kcal/mol) CCGAGCAAGCAGGCGTTGGCTCATGTTGGACACAGAGCCCGCACACTGAACGCTAAGAGCGAGGGACTCTTGAACGGCCAACTCATCGGACCGTCCTGACAGCAGCCTACTATCTTTTGGAGTGAGGAGGTTCCTAGCTACTATTGTAGCTGTTGTGGCGTCCTGCATCACGGAGTCTTCACCTGTAAGAGGA T24-m0314 57 ((...(..(((((.(..(((((((((.((((..(((((((.(.(.((........)).).).))).))))......((((.......(((((.((((.((.....((...........)).)).))))))))).(((((((....)))))))...)))))))).))))....)))))..).)))))..).)). **********AGGCGTTGGCTCATGTTGGACA***************************************************************************************************************************************************************** T24-m0314-5p 57 ----------AGGCGTTGGCTCATGTTGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0431595 4 ----------AGGCGTTGGCTCATGTTGGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0335480 4 ----------AGGCGTTGGCTCATGTTGGACA----------------------------------------------------------------------------------------------------------------------------------------------------------------- t0022806 42 ----------AGGCGTTGGCTCATGTTGGACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------- t2569481 1 -----------GGCGTTGGCTCATGTTGGACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0258642 6 // T37-m0349 scaffold457.0:134220:134412:- 193(nt) -63.60(kcal/mol) CCGAGCAAGCAGGCGTTGGCTCATGTTGGACACAGAGCCCGCACACTGAACGCTAAGAGCGAGGGACTCTTGAACGGCCAACTCATCGGACCGTCCTGACAGCAGCCTACTATCTTTTGGAGTGAGGAGGTTCCTAGCTACTATTGTAGCTGTTGTGGCGTCCTGCATCACGGAGTCTTCACCTGTAAGAGGA T37-m0349 55 ((...(..(((((.(..(((((((((.((((..(((((((.(.(.((........)).).).))).))))......((((.......(((((.((((.((.....((...........)).)).))))))))).(((((((....)))))))...)))))))).))))....)))))..).)))))..).)). **********AGGCGTTGGCTCATGTTGGACA***************************************************************************************************************************************************************** T37-m0349-5p 55 ----------AGGCGTTGGCTCATGTTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3702023 1 ----------AGGCGTTGGCTCATGTTGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0745712 2 ----------AGGCGTTGGCTCATGTTGGAC------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0117906 7 ----------AGGCGTTGGCTCATGTTGGACA----------------------------------------------------------------------------------------------------------------------------------------------------------------- t0018924 37 -----------GGCGTTGGCTCATGTTGGACA----------------------------------------------------------------------------------------------------------------------------------------------------------------- t0656021 2 -----------GGCGTTGGCTCATGTTGGACAC---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0162939 6 // novel256 T24-m0318 scaffold469.0:10805:11055:- 251(nt) -83.00(kcal/mol) ACTCTTGAATGGCTAACTCATCGGACCGTCCTGAAAGCAGCTGACTATCTTTAGGAGTGAGAAGGTTCCGAGCTACTATCGTAGCTATTGTTGCATCCGTCATCACAGAGTCTTCACCTGTAAGAGGGCCATTAGAAGATAAGAAAGACGGGCACCATACCTTACCCTGACGCGGCGCGACCGGATCACTGCTGAGACTCAAATATAAGCAAATATTAGATGGGTTAGATGAGTTAGCCATTTTCAAGAAG T24-m0318 168 ..((((((((((((((((((((...(((((.....(((((.(((......(((((.(((((.........((((((....))))))..((.(((..(((((......(.((((((........))))))).(((.....)))....)))))))).))...))))))))))..(((.....)))..))))))))........(((((......))))).)))))....))))))))))))))..)))))).. **********GGCTAACTCATCGGACCGTCC**************************************************************************************************************************************************************************************************************************** T24-m0318-5p 164 --------ATGGCTAACTCATCGGACCGTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t38 ----------GGCTAACTCATCGGACCGTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t03 ----------GGCTAACTCATCGGACCGTCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t00 ----------GGCTAACTCATCGGACCGTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t00 -----------GCTAACTCATCGGACCGTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t04 ------------CTAACTCATCGGACCGTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t01 ------------CTAACTCATCGGACCGTCCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t46 ------------CTAACTCATCGGACCGTCCTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t37 -------------TAACTCATCGGACCGTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t38 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTGCTGAGACTCAAATATAAGCA---------------------------------------- t17 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGATGAGTTAGCCATTTTCA----- t46 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGATGAGTTAGCCATTTTCAA---- t17 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGATGAGTTAGCCATTTTCAA---- t27 // T37-m0358 scaffold469.0:10805:11055:- 251(nt) -83.00(kcal/mol) ACTCTTGAATGGCTAACTCATCGGACCGTCCTGAAAGCAGCTGACTATCTTTAGGAGTGAGAAGGTTCCGAGCTACTATCGTAGCTATTGTTGCATCCGTCATCACAGAGTCTTCACCTGTAAGAGGGCCATTAGAAGATAAGAAAGACGGGCACCATACCTTACCCTGACGCGGCGCGACCGGATCACTGCTGAGACTCAAATATAAGCAAATATTAGATGGGTTAGATGAGTTAGCCATTTTCAAGAAG T37-m0358 133 ..((((((((((((((((((((...(((((.....(((((.(((......(((((.(((((.........((((((....))))))..((.(((..(((((......(.((((((........))))))).(((.....)))....)))))))).))...))))))))))..(((.....)))..))))))))........(((((......))))).)))))....))))))))))))))..)))))).. **********GGCTAACTCATCGGACCGTCC**************************************************************************************************************************************************************************************************************************** T37-m0358-5p 132 ----------GGCTAACTCATCGGACCGTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t06 ----------GGCTAACTCATCGGACCGTCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t00 ----------GGCTAACTCATCGGACCGTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t00 ----------GGCTAACTCATCGGACCGTCCTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t26 -----------GCTAACTCATCGGACCGTCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t13 ------------CTAACTCATCGGACCGTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t00 ------------CTAACTCATCGGACCGTCCTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t06 ------------CTAACTCATCGGACCGTCCTGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t13 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGATGAGTTAGCCATTTTCA----- t26 // novel257 T24-m0319 scaffold473.0:207933:208258:+ 326(nt) -94.80(kcal/mol) ATTGGGAAGAAGCTCTACTTGCTAGTTTTCAGGTCAGATCGATTTTGATAGATCACGTGCTTGAAGCTTAAGCAGGGGATCTAGAGTCTCAAGAATTATCAGAGGCAGTGTCACGAGGAAAAAAAGAAAGATCTCATGATCTGGGAATCTGATGGCATGCTTATGCAGGAAAAACGGATGTACGTGCCGGATATTGCAGAACTAAATAAAGATATTCTCGATAAAGCACATATATCGCCATATGCGATGCATCCTGGGAGTACCAAGATGTATCACACTATTCGATCTTTCTGCTACTGGCCTGGCATGAAAAGAGAGATTGCTGA T24-m0319 96 .(..(.((....((((.(((..((....(((((((((.(((.......((((((.(.(((((((...))))))).).))))))..(((((...........))))).......)))........(((((((((..................(((((.(((....))).........((((((.((((....(((((.((((((......))...)))))))))..)))).))))))))))).((.((((((((.(((.....))).)))))))).))......)))))))))....)))))))))..))..))))))).)).)..) ******************************************************************************************************************************************************************************************************************************************************************************************************TACTGGCCTGGCATGAAAAGAG********** T24-m0319-3p 96 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // T24-m0320 scaffold473.0:296258:296583:- 326(nt) -94.80(kcal/mol) ATTGGGAAGAAGCTCTACTTGCTAGTTTTCAGGTCAGATCGATTTTGATAGATCACGTGCTTGAAGCTTAAGCAGGGGATCTAGAGTCTCAAGAATTATCAGAGGCAGTGTCACGAGGAAAAAAAGAAAGATCTCATGATCTGGGAATCTGATGGCATGCTTATGCAGGAAAAACGGATGTACGTGCCGGATATTGCAGAACTAAATAAAGATATTCTCGATAAAGCACATATATCGCCATATGCGATGCATCCTGGGAGTACCAAGATGTATCACACTATTCGATCTTTCTGCTACTGGCCTGGCATGAAAAGAGAGATTGCTGA T24-m0320 96 .(..(.((....((((.(((..((....(((((((((.(((.......((((((.(.(((((((...))))))).).))))))..(((((...........))))).......)))........(((((((((..................(((((.(((....))).........((((((.((((....(((((.((((((......))...)))))))))..)))).))))))))))).((.((((((((.(((.....))).)))))))).))......)))))))))....)))))))))..))..))))))).)).)..) ******************************************************************************************************************************************************************************************************************************************************************************************************TACTGGCCTGGCATGAAAAGAG********** T24-m0320-3p 96 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // T37-m0359 scaffold473.0:207933:208258:+ 326(nt) -94.80(kcal/mol) ATTGGGAAGAAGCTCTACTTGCTAGTTTTCAGGTCAGATCGATTTTGATAGATCACGTGCTTGAAGCTTAAGCAGGGGATCTAGAGTCTCAAGAATTATCAGAGGCAGTGTCACGAGGAAAAAAAGAAAGATCTCATGATCTGGGAATCTGATGGCATGCTTATGCAGGAAAAACGGATGTACGTGCCGGATATTGCAGAACTAAATAAAGATATTCTCGATAAAGCACATATATCGCCATATGCGATGCATCCTGGGAGTACCAAGATGTATCACACTATTCGATCTTTCTGCTACTGGCCTGGCATGAAAAGAGAGATTGCTGA T37-m0359 66 .(..(.((....((((.(((..((....(((((((((.(((.......((((((.(.(((((((...))))))).).))))))..(((((...........))))).......)))........(((((((((..................(((((.(((....))).........((((((.((((....(((((.((((((......))...)))))))))..)))).))))))))))).((.((((((((.(((.....))).)))))))).))......)))))))))....)))))))))..))..))))))).)).)..) ******************************************************************************************************************************************************************************************************************************************************************************************************TACTGGCCTGGCATGAAAAGAG********** T37-m0359-3p 66 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // T37-m0360 scaffold473.0:296258:296583:- 326(nt) -94.80(kcal/mol) ATTGGGAAGAAGCTCTACTTGCTAGTTTTCAGGTCAGATCGATTTTGATAGATCACGTGCTTGAAGCTTAAGCAGGGGATCTAGAGTCTCAAGAATTATCAGAGGCAGTGTCACGAGGAAAAAAAGAAAGATCTCATGATCTGGGAATCTGATGGCATGCTTATGCAGGAAAAACGGATGTACGTGCCGGATATTGCAGAACTAAATAAAGATATTCTCGATAAAGCACATATATCGCCATATGCGATGCATCCTGGGAGTACCAAGATGTATCACACTATTCGATCTTTCTGCTACTGGCCTGGCATGAAAAGAGAGATTGCTGA T37-m0360 66 .(..(.((....((((.(((..((....(((((((((.(((.......((((((.(.(((((((...))))))).).))))))..(((((...........))))).......)))........(((((((((..................(((((.(((....))).........((((((.((((....(((((.((((((......))...)))))))))..)))).))))))))))).((.((((((((.(((.....))).)))))))).))......)))))))))....)))))))))..))..))))))).)).)..) ******************************************************************************************************************************************************************************************************************************************************************************************************TACTGGCCTGGCATGAAAAGAG********** T37-m0360-3p 66 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // novel260 T24-m0323 scaffold475.0:139477:139650:- 174(nt) -48.90(kcal/mol) AGCAAAAACAATTGAGGTGGTCTTATTCCCATGTTATTGATGACCATATCGTTGGTTTACAAGGAAACATAAACGAACTAGTGGCGGAGCTCATGAGTGAAGAAAAACAAGGTCGAGTTGTGTCTATCTGTGGGATGGGCGGGTTGGGGAAGACCACTCTCGCCAAGGAAGTTT T24-m0323 35 .............((((((((((..((((((.........(((((.....(((.(((((...(....).))))).)))..((..(...(((....)))...)....))..)))))...(.((((((((.....)))))))).).))))))))))))).)))............. ***********************************************************************************************************************************************TTGGGGAAGACCACTCTCGCC********** T24-m0323-3p 35 -----------------------------------------------------------------------------------------------------------------------------------------------TTGGGGAAGACCACTCTCGCC---------- t0030247 34 -----------------------------------------------------------------------------------------------------------------------------------------------TTGGGGAAGACCACTCTCGCCA--------- t2202856 1 // T24-m0411 scaffold681.0:19671:19844:+ 174(nt) -48.90(kcal/mol) AGCAAAAACAATTGAGGTGGTCTTATTCCCATGTTATTGATGACCATATCGTTGGTTTACAAGGAAACATAAACGAACTAGTGGCGGAGCTCATGAGTGAAGAAAAACAAGGTCGAGTTGTGTCCATTTGTGGGATGGGCGGGTTGGGGAAGACCACTCTCGCCAAGGAAGTTT T24-m0411 35 .............((((((((((..((((((.........(((((.....(((.(((((...(....).))))).)))..((..(...(((....)))...)....))..)))))...(.((((((((.....)))))))).).))))))))))))).)))............. ***********************************************************************************************************************************************TTGGGGAAGACCACTCTCGCC********** T24-m0411-3p 35 -----------------------------------------------------------------------------------------------------------------------------------------------TTGGGGAAGACCACTCTCGCC---------- t0030247 34 -----------------------------------------------------------------------------------------------------------------------------------------------TTGGGGAAGACCACTCTCGCCA--------- t2202856 1 // T37-m0361 scaffold475.0:139477:139650:- 174(nt) -48.90(kcal/mol) AGCAAAAACAATTGAGGTGGTCTTATTCCCATGTTATTGATGACCATATCGTTGGTTTACAAGGAAACATAAACGAACTAGTGGCGGAGCTCATGAGTGAAGAAAAACAAGGTCGAGTTGTGTCTATCTGTGGGATGGGCGGGTTGGGGAAGACCACTCTCGCCAAGGAAGTTT T37-m0361 25 .............((((((((((..((((((.........(((((.....(((.(((((...(....).))))).)))..((..(...(((....)))...)....))..)))))...(.((((((((.....)))))))).).))))))))))))).)))............. ***********************************************************************************************************************************************TTGGGGAAGACCACTCTCGCC********** T37-m0361-3p 25 -----------------------------------------------------------------------------------------------------------------------------------------------TTGGGGAAGACCACTCTCGCC---------- t0029934 25 // T37-m0440 scaffold681.0:19671:19844:+ 174(nt) -48.90(kcal/mol) AGCAAAAACAATTGAGGTGGTCTTATTCCCATGTTATTGATGACCATATCGTTGGTTTACAAGGAAACATAAACGAACTAGTGGCGGAGCTCATGAGTGAAGAAAAACAAGGTCGAGTTGTGTCCATTTGTGGGATGGGCGGGTTGGGGAAGACCACTCTCGCCAAGGAAGTTT T37-m0440 25 .............((((((((((..((((((.........(((((.....(((.(((((...(....).))))).)))..((..(...(((....)))...)....))..)))))...(.((((((((.....)))))))).).))))))))))))).)))............. ***********************************************************************************************************************************************TTGGGGAAGACCACTCTCGCC********** T37-m0440-3p 25 -----------------------------------------------------------------------------------------------------------------------------------------------TTGGGGAAGACCACTCTCGCC---------- t0029934 25 // novel265 T24-m0330 scaffold487.0:112937:113020:+ 84(nt) -22.00(kcal/mol) GGTGTATGAGTTTGTTGAGGTTGTTGATCCAAAGGGCCGTTGGGGCTTGATCTTTAGGATGAACAGATGATGAATGATGAACAC T24-m0330 82 .((((....(((..(((...(((((.((((((((((((.....))))....)))).)))).))))).)))..))).....)))) ****************************************************TTTAGGATGAACAGATGATGAA********** T24-m0330-3p 81 ----------------------------------------------------TTTAGGATGAACAGATGATG------------ t4706717 1 ----------------------------------------------------TTTAGGATGAACAGATGATGA----------- t0090629 14 ----------------------------------------------------TTTAGGATGAACAGATGATGAA---------- t0013354 65 -----------------------------------------------------TTAGGATGAACAGATGATGA----------- t4191633 1 ----------------------------------------------------------ATGAACAGATGATGAATGATGAA--- t1660084 1 // T37-m0365 scaffold487.0:112937:113020:+ 84(nt) -22.00(kcal/mol) GGTGTATGAGTTTGTTGAGGTTGTTGATCCAAAGGGCCGTTGGGGCTTGATCTTTAGGATGAACAGATGATGAATGATGAACAC T37-m0365 102 .((((....(((..(((...(((((.((((((((((((.....))))....)))).)))).))))).)))..))).....)))) ****************************************************TTTAGGATGAACAGATGATGAA********** T37-m0365-3p 102 ----------------------------------------------------TTTAGGATGAACAGATGATGA----------- t0039025 20 ----------------------------------------------------TTTAGGATGAACAGATGATGAA---------- t0008642 74 -----------------------------------------------------TTAGGATGAACAGATGATGA----------- t1996886 1 -----------------------------------------------------TTAGGATGAACAGATGATGAA---------- t0145384 6 -------------------------------------------------------AGGATGAACAGATGATGAATGATG----- t1435644 1 // novel276 T24-m0354 scaffold52.0:99128:99488:- 361(nt) -107.80(kcal/mol) TAGGTTTTGACAACCTTTCAAAAACAGAGCTTTGGGGTGTTGGTGTGTTAAGTCGTTTGAACACGGAAGTTCGGTCTTACCCACCAATTTGATCAAGTGCCGAATTTCTGGGTTTTGAATGATTCAGCCTATCGAAGACTGACACTCGAATGGGAGGTTTAGGCTCATCTTGATTTTGTTCAATGCTCACGCTGATATGTTGAGCCCTAGCGTTCTTCGCTTTGCTTGAAATCTTCACAGGTGCATTTGGTGTGAAGCCAAGTCCAGCTTTGTTGTTGTCAACTCCGTAATCATGGTCCTTCAACTTCTTTTGAGTCTCGGTGAGGTCACGATCTTTGTCGTTGACGGTGTTTAAAACCTT T24-m0354 721 .(((((((((..(((..((((..((((((..(((.....((((((.(((.(((((((..((..(((((((((((((((...((......))...))).))))))))))))...))..))))))).))).))))))..(((((.(((((((..(((((((.(((..(((...(((((((..(((.(((((.((......)))))))...((((.....)))))))..))))))).....((.((.(((((((.....))))))).)).))..((((....)))).........)))..)))..)))))))))))))).))))).......))).))))))..)))).)))..))))))))). *****************************************************************************************************************************************************************************************************************************************************************************************************************************************CGATCTTTGTCGTTGACGGTGT********** T24-m0354-3p 718 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // T37-m0380 scaffold52.0:99128:99488:- 361(nt) -107.80(kcal/mol) TAGGTTTTGACAACCTTTCAAAAACAGAGCTTTGGGGTGTTGGTGTGTTAAGTCGTTTGAACACGGAAGTTCGGTCTTACCCACCAATTTGATCAAGTGCCGAATTTCTGGGTTTTGAATGATTCAGCCTATCGAAGACTGACACTCGAATGGGAGGTTTAGGCTCATCTTGATTTTGTTCAATGCTCACGCTGATATGTTGAGCCCTAGCGTTCTTCGCTTTGCTTGAAATCTTCACAGGTGCATTTGGTGTGAAGCCAAGTCCAGCTTTGTTGTTGTCAACTCCGTAATCATGGTCCTTCAACTTCTTTTGAGTCTCGGTGAGGTCACGATCTTTGTCGTTGACGGTGTTTAAAACCTT T37-m0380 638 .(((((((((..(((..((((..((((((..(((.....((((((.(((.(((((((..((..(((((((((((((((...((......))...))).))))))))))))...))..))))))).))).))))))..(((((.(((((((..(((((((.(((..(((...(((((((..(((.(((((.((......)))))))...((((.....)))))))..))))))).....((.((.(((((((.....))))))).)).))..((((....)))).........)))..)))..)))))))))))))).))))).......))).))))))..)))).)))..))))))))). *****************************************************************************************************************************************************************************************************************************************************************************************************************************************CGATCTTTGTCGTTGACGGTGT********** T37-m0380-3p 637 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // novel28 T24-m0028 scaffold113.0:437650:437768:+ 119(nt) -61.12(kcal/mol) CTATTACTCTCCTCCTCTTGGTGATCGCCCTGCTTAATATGGCCTTCTGAATTCAGGGAACTTCTGGATTCAGGGCCTGCATATGGACAGGGTGGTTACCAATGGGATGACGGTGATAT T24-m0028 711 .(((((((.((.((((.(((((((((((((((((......((((..(((((((((((.....))))))))))))))).......)).))))))))))))))).)))).)).))))))). ****************************************************************************************AGGGTGGTTACCAATGGGATG********** T24-m0028-3p 693 -------------------------------------------------------------TTCTGGATTCAGGGCCTGCATA------------------------------------ t5365209 1 ---------------------------------------------------------------------------------TATGGACAGGGTGGTTACCAA----------------- t1431298 1 ----------------------------------------------------------------------------------ATGGACAGGGTGGTTACCAAT---------------- t0090763 14 -----------------------------------------------------------------------------------TGGACAGGGTGGTTACCAAT---------------- t4323668 1 ----------------------------------------------------------------------------------------AGGGTGGTTACCAATGGGA------------ t4563346 1 ----------------------------------------------------------------------------------------AGGGTGGTTACCAATGGGAT----------- t0009108 88 ----------------------------------------------------------------------------------------AGGGTGGTTACCAATGGGATG---------- t0000772 600 ----------------------------------------------------------------------------------------AGGGTGGTTACCAATGGGATGA--------- t0538094 3 -------------------------------------------------------------------------------------------GTGGTTACCAATGGGATGACGG------ t4877787 1 --------------------------------------------------------------------------------------------TGGTTACCAATGGGATGACG------- t4974334 1 // T37-m0031 scaffold113.0:437650:437768:+ 119(nt) -61.12(kcal/mol) CTATTACTCTCCTCCTCTTGGTGATCGCCCTGCTTAATATGGCCTTCTGAATTCAGGGAACTTCTGGATTCAGGGCCTGCATATGGACAGGGTGGTTACCAATGGGATGACGGTGATAT T37-m0031 737 .(((((((.((.((((.(((((((((((((((((......((((..(((((((((((.....))))))))))))))).......)).))))))))))))))).)))).)).))))))). ****************************************************************************************AGGGTGGTTACCAATGGGATG********** T37-m0031-3p 708 --------------------------------------------------------------TCTGGATTCAGGGCCTGCATAT----------------------------------- t3008717 1 --------------------------------------------------------------------TTCAGGGCCTGCATATGGACA------------------------------ t2808115 1 ---------------------------------------------------------------------------------TATGGACAGGGTGGTTACCAA----------------- t0452773 2 ---------------------------------------------------------------------------------TATGGACAGGGTGGTTACCAAT---------------- t1437706 1 ----------------------------------------------------------------------------------ATGGACAGGGTGGTTACCAAT---------------- t0031594 24 ----------------------------------------------------------------------------------------AGGGTGGTTACCAATGGGA------------ t0247073 4 ----------------------------------------------------------------------------------------AGGGTGGTTACCAATGGGAT----------- t0004869 122 ----------------------------------------------------------------------------------------AGGGTGGTTACCAATGGGATG---------- t0000771 581 ----------------------------------------------------------------------------------------AGGGTGGTTACCAATGGGATGA--------- t3626378 1 // novel280 T24-m0360 scaffold535.0:290933:291079:+ 147(nt) -36.80(kcal/mol) TTGAGACTGATGTTGAAATCAAGGCTTCTGCTGTCCACGAGTACTTAACCCGCAGGCCACACCATCCAAGCACTATCAGCTCTGATAAAATCAAGACTTGTGACATGAAGGTGACCGGGGAAGTGTTGGTTCTGTCATCAACTGGAA T24-m0360 36 ((.((..(((((.(..((((((.((((((.(.((((((((((.(((........((.....))..........(((((....))))).....))))))))))..........))).).)))))).))))))..).))))).)).)). **********TGTTGAAATCAAGGCTTCTGC******************************************************************************************************************** T24-m0360-5p 36 ----------TGTTGAAATCAAGGCTTCTGC-------------------------------------------------------------------------------------------------------------------- t0027397 36 // T37-m0383 scaffold535.0:290933:291079:+ 147(nt) -36.80(kcal/mol) TTGAGACTGATGTTGAAATCAAGGCTTCTGCTGTCCACGAGTACTTAACCCGCAGGCCACACCATCCAAGCACTATCAGCTCTGATAAAATCAAGACTTGTGACATGAAGGTGACCGGGGAAGTGTTGGTTCTGTCATCAACTGGAA T37-m0383 28 ((.((..(((((.(..((((((.((((((.(.((((((((((.(((........((.....))..........(((((....))))).....))))))))))..........))).).)))))).))))))..).))))).)).)). **********TGTTGAAATCAAGGCTTCTGC******************************************************************************************************************** T37-m0383-5p 28 ----------TGTTGAAATCAAGGCTTCTGC-------------------------------------------------------------------------------------------------------------------- t0025748 28 // novel296 T24-m0384 scaffold608.0:110529:110604:+ 76(nt) -26.30(kcal/mol) GAGGGTGGCCAGAGAAGACGACGGAATATTCCATCAGTTTGGATGGAATATTCCTAACGGCGTTAGGTTAACTTTA T24-m0384 14 ((((.(((((.((...(.((..(((((((((((((......)))))))))))))...)).).)).))))).)))). **********AGAGAAGACGACGGAATATTCCA******************************************* T24-m0384-5p 14 -------GCCAGAGAAGACGACGGAATATT---------------------------------------------- t5474908 1 --------CCAGAGAAGACGACGGAATAT----------------------------------------------- t3113274 1 ---------CAGAGAAGACGACGGAATATTCCA------------------------------------------- t4571461 1 ----------AGAGAAGACGACGGAATAT----------------------------------------------- t4829750 1 ----------AGAGAAGACGACGGAATATTCCA------------------------------------------- t0430749 4 ----------AGAGAAGACGACGGAATATTCCAT------------------------------------------ t0574749 3 -----------GAGAAGACGACGGAATATTCCA------------------------------------------- t2574767 1 ------------AGAAGACGACGGAATATTCCA------------------------------------------- t4135849 1 -------------GAAGACGACGGAATATTCCA------------------------------------------- t3599027 1 // T37-m0410 scaffold608.0:110529:110604:+ 76(nt) -26.30(kcal/mol) GAGGGTGGCCAGAGAAGACGACGGAATATTCCATCAGTTTGGATGGAATATTCCTAACGGCGTTAGGTTAACTTTA T37-m0410 21 ((((.(((((.((...(.((..(((((((((((((......)))))))))))))...)).).)).))))).)))). **********AGAGAAGACGACGGAATATTCCA******************************************* T37-m0410-5p 21 -------GCCAGAGAAGACGACGGAATATT---------------------------------------------- t3894378 1 -------GCCAGAGAAGACGACGGAATATTC--------------------------------------------- t0596085 2 --------CCAGAGAAGACGACGGAATAT----------------------------------------------- t0763791 2 ----------AGAGAAGACGACGGAATATT---------------------------------------------- t1205913 1 ----------AGAGAAGACGACGGAATATTCCA------------------------------------------- t0132297 7 ----------AGAGAAGACGACGGAATATTCCAT------------------------------------------ t0310640 3 -----------GAGAAGACGACGGAATATTCCA------------------------------------------- t2772714 1 ------------AGAAGACGACGGAATATTCCA------------------------------------------- t0327942 3 ------------AGAAGACGACGGAATATTCCATCA---------------------------------------- t2303979 1 // novel309 T24-m0403 scaffold64.0:452413:452516:- 104(nt) -56.00(kcal/mol) ACGAGTGGTGCTGACAGAAGAGAGTGAGCACACACGGGCAATTGTATAAAGCTATACCTTAGCGTGATGTGTGCTCACTTCTCTTTCTGTCAGCCGCCGGCCGC T24-m0403 57 .((..(((((((((((((((((((((((((((((((.((.(..(((((....)))))..).)).)).))))))))))).)))).))))))))).)))))..)). ***********************************************************************TGCTCACTTCTCTTTCTGTCAGC********** T24-m0403-3p 57 -----------------------------------------------------------------------TGCTCACTTCTCTTTCTGTCAG----------- t5410474 1 -----------------------------------------------------------------------TGCTCACTTCTCTTTCTGTCAGC---------- t0025755 38 ------------------------------------------------------------------------GCTCACTTCTCTTTCTGTCAG----------- t0835917 2 ------------------------------------------------------------------------GCTCACTTCTCTTTCTGTCAGC---------- t0073379 16 // T37-m0426 scaffold64.0:452413:452516:- 104(nt) -56.00(kcal/mol) ACGAGTGGTGCTGACAGAAGAGAGTGAGCACACACGGGCAATTGTATAAAGCTATACCTTAGCGTGATGTGTGCTCACTTCTCTTTCTGTCAGCCGCCGGCCGC T37-m0426 42 .((..(((((((((((((((((((((((((((((((.((.(..(((((....)))))..).)).)).))))))))))).)))).))))))))).)))))..)). ***********************************************************************TGCTCACTTCTCTTTCTGTCAGC********** T37-m0426-3p 42 -----------------------------------------------------------------------TGCTCACTTCTCTTTCTGTCAGC---------- t0029042 25 ------------------------------------------------------------------------GCTCACTTCTCTTTCTGTCAGC---------- t0049510 16 --------------------------------------------------------------------------TCACTTCTCTTTCTGTCAGCCGC------- t2761280 1 // novel317 T24-m0414 scaffold69.0:1033952:1034099:+ 148(nt) -70.20(kcal/mol) AGGATGGGGATCCTCCTGATCATGAAATTTGGACCGTTCAAATTTAACCAACGGTTGTAATTATTATAACTTTTTAGAAGATCTCTGTTTAAAATCGTTGGATCAAATTTAAATGATCCGGATTTCGTGGTCAGGAGGATGCTCATCC T24-m0414 80 .(((((((.((((((((((((((((((((((((.((((.((((((..((((((((((((.....)))))).(((((((((....)).))))))).))))))...)))))).)))).)))))))))))))))))))))))).))))))) *********************************************************************************************************************CCGGATTTCGTGGTCAGGAGG********** T24-m0414-3p 78 ------------------------------------------------CAACGGTTGTAATTATTAT--------------------------------------------------------------------------------- t1833754 1 -------------------------------------------------AACGGTTGTAATTATTATAA------------------------------------------------------------------------------- t3996028 1 --------------------------------------------------------------------------------------------------------------------TCCGGATTTCGTGGTCAGGAGGAT-------- t2213882 1 ---------------------------------------------------------------------------------------------------------------------CCGGATTTCGTGGTCAGGAGG---------- t0013093 66 ---------------------------------------------------------------------------------------------------------------------CCGGATTTCGTGGTCAGGAGGA--------- t0443860 3 ---------------------------------------------------------------------------------------------------------------------CCGGATTTCGTGGTCAGGAGGAT-------- t1116348 2 ----------------------------------------------------------------------------------------------------------------------CGGATTTCGTGGTCAGGAGG---------- t0977201 2 ----------------------------------------------------------------------------------------------------------------------CGGATTTCGTGGTCAGGAGGA--------- t0588907 3 ----------------------------------------------------------------------------------------------------------------------CGGATTTCGTGGTCAGGAGGAT-------- t2169804 1 // T37-m0445 scaffold69.0:1033952:1034099:+ 148(nt) -70.20(kcal/mol) AGGATGGGGATCCTCCTGATCATGAAATTTGGACCGTTCAAATTTAACCAACGGTTGTAATTATTATAACTTTTTAGAAGATCTCTGTTTAAAATCGTTGGATCAAATTTAAATGATCCGGATTTCGTGGTCAGGAGGATGCTCATCC T37-m0445 125 .(((((((.((((((((((((((((((((((((.((((.((((((..((((((((((((.....)))))).(((((((((....)).))))))).))))))...)))))).)))).)))))))))))))))))))))))).))))))) *********************************************************************************************************************CCGGATTTCGTGGTCAGGAGG********** T37-m0445-3p 125 --------------------------------------------------------------------------------------------------------------------TCCGGATTTCGTGGTCAGGAGGA--------- t1624870 1 --------------------------------------------------------------------------------------------------------------------TCCGGATTTCGTGGTCAGGAGGAT-------- t2240534 1 ---------------------------------------------------------------------------------------------------------------------CCGGATTTCGTGGTCAGGAGG---------- t0006156 100 ---------------------------------------------------------------------------------------------------------------------CCGGATTTCGTGGTCAGGAGGA--------- t0282412 3 ---------------------------------------------------------------------------------------------------------------------CCGGATTTCGTGGTCAGGAGGAT-------- t0068237 12 ----------------------------------------------------------------------------------------------------------------------CGGATTTCGTGGTCAGGAG----------- t2207590 1 ----------------------------------------------------------------------------------------------------------------------CGGATTTCGTGGTCAGGAGGA--------- t0233477 4 ----------------------------------------------------------------------------------------------------------------------CGGATTTCGTGGTCAGGAGGAT-------- t0339299 3 // novel319 T24-m0417 scaffold704.0:113496:113651:+ 156(nt) -40.50(kcal/mol) AATTCGCCTCGCATCTAGATTTTTAGCTATGTAGCCGGGGCTCCAACCAAGGGTTTACAATGTGGTTCAAAACTCCGAAAGATTGGTAGGTTATGCACAGGTTAGATCATTCGAGGCCTCAGTATTTGGTGGAACGCTAGATGACGCAGGAAAAAG T24-m0417 53 ......((((((((((((...(((.((((.(((.(.(((((..(.......((((((...((((...((.((((((((....))))..)))).))))))...))))))....)..))))).)))).)))).)))..))))))).)).)))...... ****************************************************************************************************************************TTTGGTGGAACGCTAGATGACG********** T24-m0417-3p 53 --------------------------------------------------------------------------------------------------------------------------TATTTGGTGGAACGCTAGATGA------------ t3162174 1 ---------------------------------------------------------------------------------------------------------------------------ATTTGGTGGAACGCTAGATGAC----------- t0442220 3 ---------------------------------------------------------------------------------------------------------------------------ATTTGGTGGAACGCTAGATGACG---------- t2170648 1 ---------------------------------------------------------------------------------------------------------------------------ATTTGGTGGAACGCTAGATGACGC--------- t0195992 7 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGAC----------- t4755078 1 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGACG---------- t0030629 33 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGACGC--------- t1046969 2 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGACGCA-------- t0295004 5 // T24-m0418 scaffold704.0:129291:129446:+ 156(nt) -40.50(kcal/mol) AATTCGCCTCGCATCTAGATTTTTAGCTATGTAGCCGGGGCTCCAACCAAGGGTTTACAATGTGGTTCAAAACTCCGAAAGATTGGTAGGTTATGCACAGGTTAGATCATTCGAGGCCTCAGTATTTGGTGGAACGCTAGATGACGCAGGAAAAAG T24-m0418 53 ......((((((((((((...(((.((((.(((.(.(((((..(.......((((((...((((...((.((((((((....))))..)))).))))))...))))))....)..))))).)))).)))).)))..))))))).)).)))...... ****************************************************************************************************************************TTTGGTGGAACGCTAGATGACG********** T24-m0418-3p 53 --------------------------------------------------------------------------------------------------------------------------TATTTGGTGGAACGCTAGATGA------------ t3162174 1 ---------------------------------------------------------------------------------------------------------------------------ATTTGGTGGAACGCTAGATGAC----------- t0442220 3 ---------------------------------------------------------------------------------------------------------------------------ATTTGGTGGAACGCTAGATGACG---------- t2170648 1 ---------------------------------------------------------------------------------------------------------------------------ATTTGGTGGAACGCTAGATGACGC--------- t0195992 7 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGAC----------- t4755078 1 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGACG---------- t0030629 33 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGACGC--------- t1046969 2 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGACGCA-------- t0295004 5 // T37-m0451 scaffold704.0:113496:113651:+ 156(nt) -40.50(kcal/mol) AATTCGCCTCGCATCTAGATTTTTAGCTATGTAGCCGGGGCTCCAACCAAGGGTTTACAATGTGGTTCAAAACTCCGAAAGATTGGTAGGTTATGCACAGGTTAGATCATTCGAGGCCTCAGTATTTGGTGGAACGCTAGATGACGCAGGAAAAAG T37-m0451 57 ......((((((((((((...(((.((((.(((.(.(((((..(.......((((((...((((...((.((((((((....))))..)))).))))))...))))))....)..))))).)))).)))).)))..))))))).)).)))...... ****************************************************************************************************************************TTTGGTGGAACGCTAGATGACG********** T37-m0451-3p 56 ----------------------------------------------------------------------------------------------------GTTAGATCATTCGAGGCCTCA----------------------------------- t2375283 1 ---------------------------------------------------------------------------------------------------------------------------ATTTGGTGGAACGCTAGATGAC----------- t0836640 1 ---------------------------------------------------------------------------------------------------------------------------ATTTGGTGGAACGCTAGATGACGC--------- t0087178 10 ---------------------------------------------------------------------------------------------------------------------------ATTTGGTGGAACGCTAGATGACGCA-------- t3054286 1 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGAC----------- t2830965 1 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGACG---------- t0023213 31 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGACGC--------- t0145222 6 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGACGCA-------- t0136603 6 // T37-m0452 scaffold704.0:129291:129446:+ 156(nt) -40.50(kcal/mol) AATTCGCCTCGCATCTAGATTTTTAGCTATGTAGCCGGGGCTCCAACCAAGGGTTTACAATGTGGTTCAAAACTCCGAAAGATTGGTAGGTTATGCACAGGTTAGATCATTCGAGGCCTCAGTATTTGGTGGAACGCTAGATGACGCAGGAAAAAG T37-m0452 57 ......((((((((((((...(((.((((.(((.(.(((((..(.......((((((...((((...((.((((((((....))))..)))).))))))...))))))....)..))))).)))).)))).)))..))))))).)).)))...... ****************************************************************************************************************************TTTGGTGGAACGCTAGATGACG********** T37-m0452-3p 56 ----------------------------------------------------------------------------------------------------GTTAGATCATTCGAGGCCTCA----------------------------------- t2375283 1 ---------------------------------------------------------------------------------------------------------------------------ATTTGGTGGAACGCTAGATGAC----------- t0836640 1 ---------------------------------------------------------------------------------------------------------------------------ATTTGGTGGAACGCTAGATGACGC--------- t0087178 10 ---------------------------------------------------------------------------------------------------------------------------ATTTGGTGGAACGCTAGATGACGCA-------- t3054286 1 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGAC----------- t2830965 1 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGACG---------- t0023213 31 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGACGC--------- t0145222 6 ----------------------------------------------------------------------------------------------------------------------------TTTGGTGGAACGCTAGATGACGCA-------- t0136603 6 // novel327 T24-m0427 scaffold74.0:82938:83033:+ 96(nt) -19.86(kcal/mol) GACATACTTCAGTTACACTGACTGTTGAGGAACCTCATTAAAATCTTAGTGTCTTTTATATTTTGTTCTTGCATTCGGGTTAGCTTGAGTTGGTTC T24-m0427 83 (((..((((.(((((..((((.(((..((((((..((((((....)))))).............))))))))).))))..))))).))))..))). **********AGTTACACTGACTGTTGAGGAA**************************************************************** T24-m0427-5p 80 ---------CAGTTACACTGACTGTTGAGGA----------------------------------------------------------------- t3233485 1 ----------AGTTACACTGACTGTTGAGGA----------------------------------------------------------------- t0071814 16 ----------AGTTACACTGACTGTTGAGGAA---------------------------------------------------------------- t0016503 55 ----------AGTTACACTGACTGTTGAGGAAC--------------------------------------------------------------- t4136584 1 ----------AGTTACACTGACTGTTGAGGAACC-------------------------------------------------------------- t0242047 6 -----------GTTACACTGACTGTTGAGGAA---------------------------------------------------------------- t2092040 1 -----------------------------------------------------TTTTATATTTTGTTCTTGCATT--------------------- t0902022 2 ------------------------------------------------------TTTATATTTTGTTCTTGCATT--------------------- t1440053 1 // T37-m0461 scaffold74.0:82938:83033:+ 96(nt) -19.86(kcal/mol) GACATACTTCAGTTACACTGACTGTTGAGGAACCTCATTAAAATCTTAGTGTCTTTTATATTTTGTTCTTGCATTCGGGTTAGCTTGAGTTGGTTC T37-m0461 46 (((..((((.(((((..((((.(((..((((((..((((((....)))))).............))))))))).))))..))))).))))..))). **********AGTTACACTGACTGTTGAGGAA**************************************************************** T37-m0461-5p 45 ---------CAGTTACACTGACTGTTGAGGA----------------------------------------------------------------- t0785948 2 ---------CAGTTACACTGACTGTTGAGGAA---------------------------------------------------------------- t0756062 2 ---------CAGTTACACTGACTGTTGAGGAAC--------------------------------------------------------------- t1985148 1 ----------AGTTACACTGACTGTTGAGG------------------------------------------------------------------ t1323828 1 ----------AGTTACACTGACTGTTGAGGA----------------------------------------------------------------- t0079804 10 ----------AGTTACACTGACTGTTGAGGAA---------------------------------------------------------------- t0033075 23 ----------AGTTACACTGACTGTTGAGGAACC-------------------------------------------------------------- t0173708 5 -----------GTTACACTGACTGTTGAGGAA---------------------------------------------------------------- t2059242 1 ----------------------------------------------------CTTTTATATTTTGTTCTTGCAT---------------------- t3482225 1 // novel331 T24-m0431 scaffold742.0:196581:196790:+ 210(nt) -52.51(kcal/mol) CGTTTTCTAATTTGGTTGGTAGTTTGATGTACACAATGGTGTGCTATAGATCGGATATTTCTCATGCAGTTGGTATAGTGAATCGCTATGCGCATAATGTAGGTAAGTTGCATTAGCATGCAACAAAATAGATATTGGGGTATCTCCATACATGGCTTAATTTTTCAACCTTCAGCTTCATCAAATGACATATCAAAAGTTAGATATGCT T24-m0431 28 .((..(((((((((((..((.((((((((........(((..(((((..((.((((((..(...((((..((((((((((...)))))))).))...)))).....(((((((....)))))))............)..))))).).))..)))))...........)))........)))))))).))..)))))..))))))...)). **********TTTGGTTGGTAGTTTGATGTA*********************************************************************************************************************************************************************************** T24-m0431-5p 28 ---------ATTTGGTTGGTAGTTTGATGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0116407 11 ----------TTTGGTTGGTAGTTTGATGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t2308204 1 ----------TTTGGTTGGTAGTTTGATGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0072237 16 // T37-m0463 scaffold742.0:196581:196790:+ 210(nt) -52.51(kcal/mol) CGTTTTCTAATTTGGTTGGTAGTTTGATGTACACAATGGTGTGCTATAGATCGGATATTTCTCATGCAGTTGGTATAGTGAATCGCTATGCGCATAATGTAGGTAAGTTGCATTAGCATGCAACAAAATAGATATTGGGGTATCTCCATACATGGCTTAATTTTTCAACCTTCAGCTTCATCAAATGACATATCAAAAGTTAGATATGCT T37-m0463 30 .((..(((((((((((..((.((((((((........(((..(((((..((.((((((..(...((((..((((((((((...)))))))).))...)))).....(((((((....)))))))............)..))))).).))..)))))...........)))........)))))))).))..)))))..))))))...)). **********TTTGGTTGGTAGTTTGATGTA*********************************************************************************************************************************************************************************** T37-m0463-5p 30 --------AATTTGGTTGGTAGTTTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1617059 1 ---------ATTTGGTTGGTAGTTTGATGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0079183 10 ----------TTTGGTTGGTAGTTTGATGTA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0039736 19 // novel336 T24-m0440 scaffold790.0:105801:106131:+ 331(nt) -88.80(kcal/mol) AGAACAATGACAAAGGAAAGAACATGGAGAAAGAATGATATGAGATACTCTTGCTTTCGACTTTGATGATACGAGATACTTTCGCTTTTGAAGAAGTACTAGCGATTTGACGACGTCGCGTGGCGAGGCTTTGCTATTTGGCGACGGTGCCAGCGGAAGGTTGTTAAGGCTTCTTGAGCTCTTTGATTATAACAACAATGTTGAGCTTGGATTTGACTTAAACTCCTCCGTCTGGATTATGCGGTTCTGCAAGGAAGGGCATCGTGCTACAGTGATTTGTTCTAGCTCATTGTGTTGCATTATTCTCTGCTTGTTTCTTTTGCATAGCCAA T24-m0440 24 ......(((.(((((((((.((...((((((..((((..(((((....(((((((..((((.(((..(((.((...((((((..(....)..))))))....)))))...))).))))...)))))))..(..((...((((.((((((((.(((((.((...(((((.....(..(((((.(((..........)))....)))))..)......)))))...)))))))........((((....))))......)))))))))))).))..)..........))))).......)))).))))))..)).))))))))))))...... **********CAAAGGAAAGAACATGGAGAA************************************************************************************************************************************************************************************************************************************************************************************************************ T24-m0440-5p 23 ------ATGACAAAGGAAAGAACATGGAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------GACAAAGGAAAGAACATGGAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------GACAAAGGAAAGAACATGGAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------ACAAAGGAAAGAACATGGAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------ACAAAGGAAAGAACATGGAGAAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------CAAAGGAAAGAACATGGAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------CAAAGGAAAGAACATGGAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------AAAGGAAAGAACATGGAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // T37-m0473 scaffold790.0:105801:106131:+ 331(nt) -88.80(kcal/mol) AGAACAATGACAAAGGAAAGAACATGGAGAAAGAATGATATGAGATACTCTTGCTTTCGACTTTGATGATACGAGATACTTTCGCTTTTGAAGAAGTACTAGCGATTTGACGACGTCGCGTGGCGAGGCTTTGCTATTTGGCGACGGTGCCAGCGGAAGGTTGTTAAGGCTTCTTGAGCTCTTTGATTATAACAACAATGTTGAGCTTGGATTTGACTTAAACTCCTCCGTCTGGATTATGCGGTTCTGCAAGGAAGGGCATCGTGCTACAGTGATTTGTTCTAGCTCATTGTGTTGCATTATTCTCTGCTTGTTTCTTTTGCATAGCCAA T37-m0473 19 ......(((.(((((((((.((...((((((..((((..(((((....(((((((..((((.(((..(((.((...((((((..(....)..))))))....)))))...))).))))...)))))))..(..((...((((.((((((((.(((((.((...(((((.....(..(((((.(((..........)))....)))))..)......)))))...)))))))........((((....))))......)))))))))))).))..)..........))))).......)))).))))))..)).))))))))))))...... **********CAAAGGAAAGAACATGGAGAA************************************************************************************************************************************************************************************************************************************************************************************************************ T37-m0473-5p 19 --------GACAAAGGAAAGAACATGGAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------ACAAAGGAAAGAACATGGAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ---------ACAAAGGAAAGAACATGGAGAAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ----------CAAAGGAAAGAACATGGAGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------CAAAGGAAAGAACATGGAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------CAAAGGAAAGAACATGGAGAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ----------CAAAGGAAAGAACATGGAGAAAGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------AAAGGAAAGAACATGGAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------AAGGAAAGAACATGGAGAAAGAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- // novel343 T24-m0449 scaffold815.0:156360:156527:- 168(nt) -54.84(kcal/mol) ATTGTGGGCTTTGGAATTGGAAGGAAATGCATAGCCTTGGGGTTGGTTTAAGAGAGAATGGGCTAGGCCCTTTGTTTTATGTCCAAAATGAATACAAGGCCTTCAAATTCGTCCAACACTTTGGCTCCAATCATATGTTATCCATTCCAAGCCCAATTTTGCTCCAAA T24-m0449 45 .(((.((((.((((..(((((((((...(((((...(((((((..(.......((((((..(..(((((..(((((((((.......))))).))))))))).)..)))).)).......)..)))))))...)))))..))).))))))..))))....))))))). **********TTGGAATTGGAAGGAAATGCATA*************************************************************************************************************************************** T24-m0449-5p 44 ---------TTTGGAATTGGAAGGAAATGCATA--------------------------------------------------------------------------------------------------------------------------------------- t1014047 2 ----------TTGGAATTGGAAGGAAATGCATA--------------------------------------------------------------------------------------------------------------------------------------- t0023204 42 --------------------------------------------------------------------------------------------------------------------------GGCTCCAATCATATGTTATCCA------------------------ t3277808 1 // T37-m0483 scaffold815.0:156360:156527:- 168(nt) -54.84(kcal/mol) ATTGTGGGCTTTGGAATTGGAAGGAAATGCATAGCCTTGGGGTTGGTTTAAGAGAGAATGGGCTAGGCCCTTTGTTTTATGTCCAAAATGAATACAAGGCCTTCAAATTCGTCCAACACTTTGGCTCCAATCATATGTTATCCATTCCAAGCCCAATTTTGCTCCAAA T37-m0483 28 .(((.((((.((((..(((((((((...(((((...(((((((..(.......((((((..(..(((((..(((((((((.......))))).))))))))).)..)))).)).......)..)))))))...)))))..))).))))))..))))....))))))). **********TTGGAATTGGAAGGAAATGCATA*************************************************************************************************************************************** T37-m0483-5p 28 ----------TTGGAATTGGAAGGAAATGCATA--------------------------------------------------------------------------------------------------------------------------------------- t0026867 27 -----------TGGAATTGGAAGGAAATGCATA--------------------------------------------------------------------------------------------------------------------------------------- t2530739 1 novel351 T24-m0464 scaffold887.0:72068:72137:+ 70(nt) -22.90(kcal/mol) TTCAATGTGTTGAAAACACAGCTCGGTACACCAAGTATTAGTATACTGGGTCGTGTTCCCACCATTGAAA T24-m0464 25 (((((((.((.(..(((((.((((((((.((.........)).)))))))).)))))..)))))))))). **********TGAAAACACAGCTCGGTACACCA************************************* T24-m0464-5p 24 ----------TGAAAACACAGCTCGGTACACCA------------------------------------- t0156248 9 ----------TGAAAACACAGCTCGGTACACCAA------------------------------------ t0192008 7 -----------GAAAACACAGCTCGGTACACCAA------------------------------------ t5049007 1 -----------GAAAACACAGCTCGGTACACCAAG----------------------------------- t3180401 1 ------------AAAACACAGCTCGGTACACCA------------------------------------- t0946644 2 ------------AAAACACAGCTCGGTACACCAAGT---------------------------------- t0762588 2 -------------AAACACAGCTCGGTACACCAAGT---------------------------------- t1150184 2 --------------AACACAGCTCGGTACACCAAGTAT-------------------------------- t1320737 1 // T37-m0500 scaffold887.0:72068:72137:+ 70(nt) -22.90(kcal/mol) TTCAATGTGTTGAAAACACAGCTCGGTACACCAAGTATTAGTATACTGGGTCGTGTTCCCACCATTGAAA T37-m0500 13 (((((((.((.(..(((((.((((((((.((.........)).)))))))).)))))..)))))))))). **********TGAAAACACAGCTCGGTACACCA************************************* T37-m0500-5p 13 ----------TGAAAACACAGCTCGGTACACCA------------------------------------- t0099902 9 ----------TGAAAACACAGCTCGGTACACCAA------------------------------------ t0675103 2 -----------GAAAACACAGCTCGGTACACCAAG----------------------------------- t3666398 1 ------------AAAACACAGCTCGGTACACCA------------------------------------- t3895552 1 // novel352 T24-m0465 scaffold888.0:134510:134639:+ 130(nt) -32.70(kcal/mol) CCTTGCCCGATCTTGAGAGGATGCACTGTTTTCCTCCCTAATGGTTTCTCCAAGATTTCCTATATCCAGATAGATCTTGGTATCCACTACCGAAGTAAGGTAGTTCTTCCTAGTAATGTCCAAGGCAACA T24-m0465 43 ..(((((.(((((((.(((((...((((((.........))))))))))))))))))...........((((...((.((.....((((((.......))))))....)).))...))))...))))).. **********TCTTGAGAGGATGCACTGTTTT************************************************************************************************** T24-m0465-5p 43 -------CGATCTTGAGAGGATGCACTG------------------------------------------------------------------------------------------------------ t3292180 1 ---------ATCTTGAGAGGATGCACTGTTT--------------------------------------------------------------------------------------------------- t1172701 2 ----------TCTTGAGAGGATGCACTGTTT--------------------------------------------------------------------------------------------------- t0847396 2 ----------TCTTGAGAGGATGCACTGTTTT-------------------------------------------------------------------------------------------------- t0026363 38 // T37-m0501 scaffold888.0:134510:134639:+ 130(nt) -32.70(kcal/mol) CCTTGCCCGATCTTGAGAGGATGCACTGTTTTCCTCCCTAATGGTTTCTCCAAGATTTCCTATATCCAGATAGATCTTGGTATCCACTACCGAAGTAAGGTAGTTCTTCCTAGTAATGTCCAAGGCAACA T37-m0501 37 ..(((((.(((((((.(((((...((((((.........))))))))))))))))))...........((((...((.((.....((((((.......))))))....)).))...))))...))))).. **********TCTTGAGAGGATGCACTGTTTT************************************************************************************************** T37-m0501-5p 36 ----GCCCGATCTTGAGAGGATGCACT------------------------------------------------------------------------------------------------------- t3410942 1 -------CGATCTTGAGAGGATGCACTGT----------------------------------------------------------------------------------------------------- t2352604 1 ----------TCTTGAGAGGATGCACTGTT---------------------------------------------------------------------------------------------------- t3309805 1 ----------TCTTGAGAGGATGCACTGTTT--------------------------------------------------------------------------------------------------- t0368765 3 ----------TCTTGAGAGGATGCACTGTTTT-------------------------------------------------------------------------------------------------- t0023485 31 novel4 T24-m0004 scaffold1.0:57557:57709:- 153(nt) -73.95(kcal/mol) CTTGAACTTCTCACACTATGGAGCGATGGTCCTTTTGGGGAACTCTATTTGAACTTTCATCCAACATAAAAGGTTTAAAGGGGGAAATAAAGGATGGAAGTTCTAACGGGATTACCCAAAAGGACCATTGCTCCACATTGTGATAAGTTCATG T24-m0004 54 ..(((((((.(((((.(.(((((((((((((((((((((.((..(..((.((((((((((((.............................)))))))))))).))..)..)).))))))))))))))))))))).).))))).))))))).. **********TCACACTATGGAGCGATGGTC************************************************************************************************************************** T24-m0004-5p 53 --------TCTCACACTATGGAGCGATGG---------------------------------------------------------------------------------------------------------------------------- t4950184 1 --------TCTCACACTATGGAGCGATGGTCC------------------------------------------------------------------------------------------------------------------------- t3941404 1 ----------TCACACTATGGAGCGATGG---------------------------------------------------------------------------------------------------------------------------- t1592042 1 ----------TCACACTATGGAGCGATGGTC-------------------------------------------------------------------------------------------------------------------------- t0018400 50 ------------------------------------------------------------------------------------------AGGATGGAAGTTCTAACGGGATT---------------------------------------- t2186421 1 // T37-m0006 scaffold1.0:57557:57709:- 153(nt) -73.95(kcal/mol) CTTGAACTTCTCACACTATGGAGCGATGGTCCTTTTGGGGAACTCTATTTGAACTTTCATCCAACATAAAAGGTTTAAAGGGGGAAATAAAGGATGGAAGTTCTAACGGGATTACCCAAAAGGACCATTGCTCCACATTGTGATAAGTTCATG T37-m0006 58 ..(((((((.(((((.(.(((((((((((((((((((((.((..(..((.((((((((((((.............................)))))))))))).))..)..)).))))))))))))))))))))).).))))).))))))).. **********TCACACTATGGAGCGATGGTC************************************************************************************************************************** T37-m0006-5p 58 --------TCTCACACTATGGAGCGATGGTCC------------------------------------------------------------------------------------------------------------------------- t0521031 2 ----------TCACACTATGGAGCGATGGTC-------------------------------------------------------------------------------------------------------------------------- t0012350 54 ----------TCACACTATGGAGCGATGGTCC------------------------------------------------------------------------------------------------------------------------- t3189413 1 -----------CACACTATGGAGCGATGGTC-------------------------------------------------------------------------------------------------------------------------- t3243337 1 novel60 T24-m0065 scaffold139.0:251700:251901:+ 202(nt) -37.00(kcal/mol) AAAAATAGTACAACTTTACTTGGATTGTTGATATAATGTTAAATATGTTTATGTTGTCTCGTTAAAACCTTGATAGGAAAAACACAGTGGGAAAAATCCTAATCAAAGGAAAAATAGTACAACATGCATGTATCATGGATGCTCCCCTTAATATATATCTCCCCCTGATTCTGCATTCTCCAAATTTAGTTGTTTGGTAAGT T24-m0065 286 ....((...((((((..(.(((((.(((.((..(((((...(((((....)))))....)))))...(((....))).......(((.((((....((((......))))............(((.((((...)))).)))..................)))).)))..)).)))...))))).)..))))))...)).... **********CAACTTTACTTGGATTGTTGAT************************************************************************************************************************************************************************** T24-m0065-5p 278 --------TACAACTTTACTTGGATTGTTGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0974727 2 ---------ACAACTTTACTTGGATTGTTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0444940 3 ---------ACAACTTTACTTGGATTGTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0644547 3 ----------CAACTTTACTTGGATTGTTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0069691 17 ----------CAACTTTACTTGGATTGTTGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0003189 197 ----------CAACTTTACTTGGATTGTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0041724 26 ----------CAACTTTACTTGGATTGTTGATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0054153 21 -------------CTTTACTTGGATTGTTGATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0145730 9 --------------------------------------------------------------------------------------------------------------AAAATAGTACAACATGCATG------------------------------------------------------------------------ t5309617 1 ---------------------------------------------------------------------------------------------------------------------TACAACATGCATGTATCATGGAT-------------------------------------------------------------- t3740788 1 ---------------------------------------------------------------------------------------------------------------------TACAACATGCATGTATCATGGATG------------------------------------------------------------- t1047400 2 ----------------------------------------------------------------------------------------------------------------------ACAACATGCATGTATCATGGATGC------------------------------------------------------------ t2810408 1 --------------------------------------------------------------------------------------------------------------------------CATGCATGTATCATGGATGCTC---------------------------------------------------------- t2822801 1 ----------------------------------------------------------------------------------------------------------------------------TGCATGTATCATGGATGCTCCC-------------------------------------------------------- t3106010 1 -----------------------------------------------------------------------------------------------------------------------------GCATGTATCATGGATGCTCCCC------------------------------------------------------- t1582034 1 // T24-m0106 scaffold173.0:381273:381399:+ 127(nt) -21.80(kcal/mol) AAAAAGAGTACAACTTTACTTGGATTGTTGATATAATGTTAAATATGCTTATGTTGCCTCGTTAAAACCTTGATAGGAAAAGCCCAGTGGGAAAAATCTTAATTGAAGGAAAAGGAGTACAACATGC T24-m0106 278 .......((((..((((.(((.(((((..(((.(((((...(((((....)))))....)))))...(((....))).....(((...)))....))).))))).)))..))))..))))....... **********CAACTTTACTTGGATTGTTGAT*********************************************************************************************** T24-m0106-5p 278 --------TACAACTTTACTTGGATTGTTGAT----------------------------------------------------------------------------------------------- t0974727 2 ---------ACAACTTTACTTGGATTGTTGA------------------------------------------------------------------------------------------------ t0444940 3 ---------ACAACTTTACTTGGATTGTTGATA---------------------------------------------------------------------------------------------- t0644547 3 ----------CAACTTTACTTGGATTGTTGA------------------------------------------------------------------------------------------------ t0069691 17 ----------CAACTTTACTTGGATTGTTGAT----------------------------------------------------------------------------------------------- t0003189 197 ----------CAACTTTACTTGGATTGTTGATA---------------------------------------------------------------------------------------------- t0041724 26 ----------CAACTTTACTTGGATTGTTGATAT--------------------------------------------------------------------------------------------- t0054153 21 -------------CTTTACTTGGATTGTTGATATA-------------------------------------------------------------------------------------------- t0145730 9 // T24-m0107 scaffold173.0:700494:700620:- 127(nt) -21.80(kcal/mol) AAAAAGAGTACAACTTTACTTGGATTGTTGATATAATGTTAAATATGCTTATGTTGCCTCGTTAAAACCTTGATAGGAAAAGCCCAGTGGGAAAAATCTTAATTGAAGGAAAAGGAGTACAACATGC T24-m0107 278 .......((((..((((.(((.(((((..(((.(((((...(((((....)))))....)))))...(((....))).....(((...)))....))).))))).)))..))))..))))....... **********CAACTTTACTTGGATTGTTGAT*********************************************************************************************** T24-m0107-5p 278 --------TACAACTTTACTTGGATTGTTGAT----------------------------------------------------------------------------------------------- t0974727 2 ---------ACAACTTTACTTGGATTGTTGA------------------------------------------------------------------------------------------------ t0444940 3 ---------ACAACTTTACTTGGATTGTTGATA---------------------------------------------------------------------------------------------- t0644547 3 ----------CAACTTTACTTGGATTGTTGA------------------------------------------------------------------------------------------------ t0069691 17 ----------CAACTTTACTTGGATTGTTGAT----------------------------------------------------------------------------------------------- t0003189 197 ----------CAACTTTACTTGGATTGTTGATA---------------------------------------------------------------------------------------------- t0041724 26 ----------CAACTTTACTTGGATTGTTGATAT--------------------------------------------------------------------------------------------- t0054153 21 -------------CTTTACTTGGATTGTTGATATA-------------------------------------------------------------------------------------------- t0145730 9 // T37-m0076 scaffold139.0:251700:251901:+ 202(nt) -37.00(kcal/mol) AAAAATAGTACAACTTTACTTGGATTGTTGATATAATGTTAAATATGTTTATGTTGTCTCGTTAAAACCTTGATAGGAAAAACACAGTGGGAAAAATCCTAATCAAAGGAAAAATAGTACAACATGCATGTATCATGGATGCTCCCCTTAATATATATCTCCCCCTGATTCTGCATTCTCCAAATTTAGTTGTTTGGTAAGT T37-m0076 158 ....((...((((((..(.(((((.(((.((..(((((...(((((....)))))....)))))...(((....))).......(((.((((....((((......))))............(((.((((...)))).)))..................)))).)))..)).)))...))))).)..))))))...)).... **********CAACTTTACTTGGATTGTTGAT************************************************************************************************************************************************************************** T37-m0076-5p 156 --------TACAACTTTACTTGGATTGTTGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1035866 1 ---------ACAACTTTACTTGGATTGTTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0916047 1 ---------ACAACTTTACTTGGATTGTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0764949 2 ----------CAACTTTACTTGGATTGTTGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0037522 20 ----------CAACTTTACTTGGATTGTTGAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0006383 97 ----------CAACTTTACTTGGATTGTTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0048664 16 ----------CAACTTTACTTGGATTGTTGATAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0092358 9 -------------CTTTACTTGGATTGTTGATATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0087015 10 -----------------------------------------------------------------------------------------------------------------------CAACATGCATGTATCATGGAT-------------------------------------------------------------- t1504594 1 -----------------------------------------------------------------------------------------------------------------------------GCATGTATCATGGATGCTCCC-------------------------------------------------------- t2583019 1 // T37-m0124 scaffold173.0:381273:381399:+ 127(nt) -21.80(kcal/mol) AAAAAGAGTACAACTTTACTTGGATTGTTGATATAATGTTAAATATGCTTATGTTGCCTCGTTAAAACCTTGATAGGAAAAGCCCAGTGGGAAAAATCTTAATTGAAGGAAAAGGAGTACAACATGC T37-m0124 157 .......((((..((((.(((.(((((..(((.(((((...(((((....)))))....)))))...(((....))).....(((...)))....))).))))).)))..))))..))))....... **********CAACTTTACTTGGATTGTTGAT*********************************************************************************************** T37-m0124-5p 156 ----AGAGTACAACTTTACTTGGATTG---------------------------------------------------------------------------------------------------- t3438232 1 --------TACAACTTTACTTGGATTGTTGAT----------------------------------------------------------------------------------------------- t1035866 1 ---------ACAACTTTACTTGGATTGTTGA------------------------------------------------------------------------------------------------ t0916047 1 ---------ACAACTTTACTTGGATTGTTGATA---------------------------------------------------------------------------------------------- t0764949 2 ----------CAACTTTACTTGGATTGTTGA------------------------------------------------------------------------------------------------ t0037522 20 ----------CAACTTTACTTGGATTGTTGAT----------------------------------------------------------------------------------------------- t0006383 97 ----------CAACTTTACTTGGATTGTTGATA---------------------------------------------------------------------------------------------- t0048664 16 ----------CAACTTTACTTGGATTGTTGATAT--------------------------------------------------------------------------------------------- t0092358 9 -------------CTTTACTTGGATTGTTGATATA-------------------------------------------------------------------------------------------- t0087015 10 // T37-m0125 scaffold173.0:700494:700620:- 127(nt) -21.80(kcal/mol) AAAAAGAGTACAACTTTACTTGGATTGTTGATATAATGTTAAATATGCTTATGTTGCCTCGTTAAAACCTTGATAGGAAAAGCCCAGTGGGAAAAATCTTAATTGAAGGAAAAGGAGTACAACATGC T37-m0125 157 .......((((..((((.(((.(((((..(((.(((((...(((((....)))))....)))))...(((....))).....(((...)))....))).))))).)))..))))..))))....... **********CAACTTTACTTGGATTGTTGAT*********************************************************************************************** T37-m0125-5p 156 ----AGAGTACAACTTTACTTGGATTG---------------------------------------------------------------------------------------------------- t3438232 1 --------TACAACTTTACTTGGATTGTTGAT----------------------------------------------------------------------------------------------- t1035866 1 ---------ACAACTTTACTTGGATTGTTGA------------------------------------------------------------------------------------------------ t0916047 1 ---------ACAACTTTACTTGGATTGTTGATA---------------------------------------------------------------------------------------------- t0764949 2 ----------CAACTTTACTTGGATTGTTGA------------------------------------------------------------------------------------------------ t0037522 20 ----------CAACTTTACTTGGATTGTTGAT----------------------------------------------------------------------------------------------- t0006383 97 ----------CAACTTTACTTGGATTGTTGATA---------------------------------------------------------------------------------------------- t0048664 16 ----------CAACTTTACTTGGATTGTTGATAT--------------------------------------------------------------------------------------------- t0092358 9 -------------CTTTACTTGGATTGTTGATATA-------------------------------------------------------------------------------------------- t0087015 10 // novel67 T24-m0074 scaffold144.0:39341:39536:+ 196(nt) -53.81(kcal/mol) TAGAGAGCAGAATAGGCGTAGATAGACCGTGGGAATCTCAGAAAAAAGAAATAAAATCTCCAAAAAATAAGAAAAAAAAAGGAAGAGAAGTTATGGTTTTTAATTAGGGTATCTTCTTGAAAGACCACCATTGTTATTCGATCATTCATTCATTCTGCGTATCCGTACGGTCTATCCACTCCTCTCTTACTCTCTC T24-m0074 596 .((((((.(((..(((.((.((((((((((((((..(.(((((...............(((...................)))...(((...((((((..((((...(((.((((.....))))..)))...))))...))))))...))).))))).)..))).))))))))))).)).))).)))..)))))). **********AATAGGCGTAGATAGACCGTGGG******************************************************************************************************************************************************************* T24-m0074-5p 589 ---AGAGCAGAATAGGCGTAGATAGACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t5412731 1 ----GAGCAGAATAGGCGTAGATAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0703635 2 ----GAGCAGAATAGGCGTAGATAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0802422 2 ------GCAGAATAGGCGTAGATAGACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0852863 2 -------CAGAATAGGCGTAGATAGACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0402124 4 --------AGAATAGGCGTAGATAGACCGTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t4252077 1 ----------AATAGGCGTAGATAGACCGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0405126 4 ----------AATAGGCGTAGATAGACCGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0019862 47 ----------AATAGGCGTAGATAGACCGTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0021028 45 ----------AATAGGCGTAGATAGACCGTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0001707 315 ----------AATAGGCGTAGATAGACCGTGGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0025192 39 ----------AATAGGCGTAGATAGACCGTGGGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------- t0657522 3 -----------ATAGGCGTAGATAGACCGTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0149607 9 ------------TAGGCGTAGATAGACCGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t3289130 1 ------------TAGGCGTAGATAGACCGTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0100489 12 ------------TAGGCGTAGATAGACCGTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0007068 107 ------------TAGGCGTAGATAGACCGTGGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------ t1097496 2 // T24-m0290 scaffold413.0:336064:336253:- 190(nt) -55.79(kcal/mol) TAGAGAGCAGAATAGGCGTAGATAGACCGTGGGAACCTCAGAAAAGAAGAAAAAAAATCCCCACAAAAAAAAAGGAAGAAAAGTTATGGTCTTTAATTAGGGTTTCTTCATAAAAGGCCGCCATTGTTTCTTCAATCGTTCATTCATTCTGCGTATCCGAACGGTCTATCCACTCCTCTCTTACTCTCTC T24-m0290 596 .((((((.(((..(((.((.((((((((((.(((..(.(((((..((((((.......................((((((((((..((((((((.((.(((....))).)).))))))))..))).))))))).....))).))).))))).)..)))..)))))))))).)).))).)))..)))))). **********AATAGGCGTAGATAGACCGTGGG************************************************************************************************************************************************************* T24-m0290-5p 589 ---AGAGCAGAATAGGCGTAGATAGACC------------------------------------------------------------------------------------------------------------------------------------------------------------------ t5412731 1 ----GAGCAGAATAGGCGTAGATAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0703635 2 ----GAGCAGAATAGGCGTAGATAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0802422 2 ------GCAGAATAGGCGTAGATAGACC------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0852863 2 -------CAGAATAGGCGTAGATAGACC------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0402124 4 --------AGAATAGGCGTAGATAGACCGTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------- t4252077 1 ----------AATAGGCGTAGATAGACCGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0405126 4 ----------AATAGGCGTAGATAGACCGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0019862 47 ----------AATAGGCGTAGATAGACCGTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------- t0021028 45 ----------AATAGGCGTAGATAGACCGTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------- t0001707 315 ----------AATAGGCGTAGATAGACCGTGGGA------------------------------------------------------------------------------------------------------------------------------------------------------------ t0025192 39 ----------AATAGGCGTAGATAGACCGTGGGAA----------------------------------------------------------------------------------------------------------------------------------------------------------- t0657522 3 -----------ATAGGCGTAGATAGACCGTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------- t0149607 9 ------------TAGGCGTAGATAGACCGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------- t3289130 1 ------------TAGGCGTAGATAGACCGTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------- t0100489 12 ------------TAGGCGTAGATAGACCGTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------- t0007068 107 ------------TAGGCGTAGATAGACCGTGGGA------------------------------------------------------------------------------------------------------------------------------------------------------------ t1097496 2 // T37-m0083 scaffold144.0:39341:39536:+ 196(nt) -53.81(kcal/mol) TAGAGAGCAGAATAGGCGTAGATAGACCGTGGGAATCTCAGAAAAAAGAAATAAAATCTCCAAAAAATAAGAAAAAAAAAGGAAGAGAAGTTATGGTTTTTAATTAGGGTATCTTCTTGAAAGACCACCATTGTTATTCGATCATTCATTCATTCTGCGTATCCGTACGGTCTATCCACTCCTCTCTTACTCTCTC T37-m0083 377 .((((((.(((..(((.((.((((((((((((((..(.(((((...............(((...................)))...(((...((((((..((((...(((.((((.....))))..)))...))))...))))))...))).))))).)..))).))))))))))).)).))).)))..)))))). **********AATAGGCGTAGATAGACCGTGGG******************************************************************************************************************************************************************* T37-m0083-5p 368 ----GAGCAGAATAGGCGTAGATAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1297549 1 ----GAGCAGAATAGGCGTAGATAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0242680 4 ------GCAGAATAGGCGTAGATAGACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0679070 2 --------AGAATAGGCGTAGATAGACC------------------------------------------------------------------------------------------------------------------------------------------------------------------------ t2018256 1 ----------AATAGGCGTAGATAGACCG----------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1752143 1 ----------AATAGGCGTAGATAGACCGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0560652 2 ----------AATAGGCGTAGATAGACCGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0023905 30 ----------AATAGGCGTAGATAGACCGTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0057372 14 ----------AATAGGCGTAGATAGACCGTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0002804 195 ----------AATAGGCGTAGATAGACCGTGGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0032812 23 -----------ATAGGCGTAGATAGACCGTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1674223 1 ------------TAGGCGTAGATAGACCGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0796243 2 ------------TAGGCGTAGATAGACCGTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0090426 9 ------------TAGGCGTAGATAGACCGTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0007378 85 ------------TAGGCGTAGATAGACCGTGGGA------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0185973 5 ------------------TAGATAGACCGTGGGAATCTCA------------------------------------------------------------------------------------------------------------------------------------------------------------ t2431639 1 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCCACTCCTCTCTTACTC---- t1665796 1 // T37-m0325 scaffold413.0:336064:336253:- 190(nt) -55.79(kcal/mol) TAGAGAGCAGAATAGGCGTAGATAGACCGTGGGAACCTCAGAAAAGAAGAAAAAAAATCCCCACAAAAAAAAAGGAAGAAAAGTTATGGTCTTTAATTAGGGTTTCTTCATAAAAGGCCGCCATTGTTTCTTCAATCGTTCATTCATTCTGCGTATCCGAACGGTCTATCCACTCCTCTCTTACTCTCTC T37-m0325 376 .((((((.(((..(((.((.((((((((((.(((..(.(((((..((((((.......................((((((((((..((((((((.((.(((....))).)).))))))))..))).))))))).....))).))).))))).)..)))..)))))))))).)).))).)))..)))))). **********AATAGGCGTAGATAGACCGTGGG************************************************************************************************************************************************************* T37-m0325-5p 368 ----GAGCAGAATAGGCGTAGATAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------- t1297549 1 ----GAGCAGAATAGGCGTAGATAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------- t0242680 4 ------GCAGAATAGGCGTAGATAGACC------------------------------------------------------------------------------------------------------------------------------------------------------------------ t0679070 2 --------AGAATAGGCGTAGATAGACC------------------------------------------------------------------------------------------------------------------------------------------------------------------ t2018256 1 ----------AATAGGCGTAGATAGACCG----------------------------------------------------------------------------------------------------------------------------------------------------------------- t1752143 1 ----------AATAGGCGTAGATAGACCGT---------------------------------------------------------------------------------------------------------------------------------------------------------------- t0560652 2 ----------AATAGGCGTAGATAGACCGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0023905 30 ----------AATAGGCGTAGATAGACCGTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------- t0057372 14 ----------AATAGGCGTAGATAGACCGTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------- t0002804 195 ----------AATAGGCGTAGATAGACCGTGGGA------------------------------------------------------------------------------------------------------------------------------------------------------------ t0032812 23 -----------ATAGGCGTAGATAGACCGTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------- t1674223 1 ------------TAGGCGTAGATAGACCGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------- t0796243 2 ------------TAGGCGTAGATAGACCGTGG-------------------------------------------------------------------------------------------------------------------------------------------------------------- t0090426 9 ------------TAGGCGTAGATAGACCGTGGG------------------------------------------------------------------------------------------------------------------------------------------------------------- t0007378 85 ------------TAGGCGTAGATAGACCGTGGGA------------------------------------------------------------------------------------------------------------------------------------------------------------ t0185973 5 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCCACTCCTCTCTTACTC---- t1665796 1 // novel71 T24-m0078 scaffold1456.0:34639:34810:- 172(nt) -50.40(kcal/mol) AGCCTTCACAAAGGTTGTGTACGTGAAGCCCCACTACGTGGCAACACTCTAGGAGCAGGTGGCATCGGAGCAGGAGGCATCGGAGCGAGAGGCATAGGAGCGGGAGGCACCAAAGATAGATCATTCAAGGCCTCAATCCTTAGTGGAACGCTAGATGACGCAGGAAAAAGGT T24-m0078 2047 .(((((....)))))(((((.(((..(((.((((((.(((....)))...((((.......((..((..((.....))..))..))..(((((...((.((.....)).)).......((....))...)))))..))))))))))...)))..)))))))).......... ********************************************************************************************************************************************TAGTGGAACGCTAGATGACGCA********** T24-m0078-3p 2044 -----------------------------------------------------------------------------------------------AGGAGCGGGAGGCACCAAAGATAG----------------------------------------------------- t5194455 1 ----------------------------------------------------------------------------------------------------CGGGAGGCACCAAAGATAGATC-------------------------------------------------- t2805127 1 ------------------------------------------------------------------------------------------------------GGAGGCACCAAAGATAGATCATT----------------------------------------------- t2617109 1 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACG------------ t0030148 34 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACGC----------- t0086826 14 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACGCA---------- t0047090 23 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACGCAG--------- t2433693 1 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACG------------ t0171890 8 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACGC----------- t0003628 178 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACGCA---------- t0026960 37 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACGCAG--------- t0041941 26 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACGCAGG-------- t2778286 1 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACG------------ t0668504 2 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGC----------- t0012573 68 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCA---------- t0000421 949 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCAG--------- t0004338 154 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCAGG-------- t0002819 216 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCAGGA------- t0439929 4 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGC----------- t0578491 3 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCA---------- t0005790 126 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCAG--------- t0004003 164 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCAGG-------- t0243033 6 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCAGGA------- t0035390 30 // T24-m0264 scaffold36.0:734774:734945:- 172(nt) -50.40(kcal/mol) AGCCTTCACAAAGGTTGTGTACGTGAAGCCCCACTACGTGGCAACACTCTAGGAGCAGGTGGCATCGGAGCAGGAGGCATCGGAGCGAGAGGCATAGGAGCGGGAGGCACCAAAGATAGATCATTCAAGGCCTCAATCCTTAGTGGAACGCTAGATGACGCAGGAAAAAGGT T24-m0264 2047 .(((((....)))))(((((.(((..(((.((((((.(((....)))...((((.......((..((..((.....))..))..))..(((((...((.((.....)).)).......((....))...)))))..))))))))))...)))..)))))))).......... ********************************************************************************************************************************************TAGTGGAACGCTAGATGACGCA********** T24-m0264-3p 2044 -----------------------------------------------------------------------------------------------AGGAGCGGGAGGCACCAAAGATAG----------------------------------------------------- t5194455 1 ----------------------------------------------------------------------------------------------------CGGGAGGCACCAAAGATAGATC-------------------------------------------------- t2805127 1 ------------------------------------------------------------------------------------------------------GGAGGCACCAAAGATAGATCATT----------------------------------------------- t2617109 1 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACG------------ t0030148 34 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACGC----------- t0086826 14 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACGCA---------- t0047090 23 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACGCAG--------- t2433693 1 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACG------------ t0171890 8 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACGC----------- t0003628 178 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACGCA---------- t0026960 37 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACGCAG--------- t0041941 26 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACGCAGG-------- t2778286 1 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACG------------ t0668504 2 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGC----------- t0012573 68 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCA---------- t0000421 949 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCAG--------- t0004338 154 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCAGG-------- t0002819 216 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCAGGA------- t0439929 4 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGC----------- t0578491 3 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCA---------- t0005790 126 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCAG--------- t0004003 164 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCAGG-------- t0243033 6 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCAGGA------- t0035390 30 // T37-m0087 scaffold1456.0:34639:34810:- 172(nt) -50.40(kcal/mol) AGCCTTCACAAAGGTTGTGTACGTGAAGCCCCACTACGTGGCAACACTCTAGGAGCAGGTGGCATCGGAGCAGGAGGCATCGGAGCGAGAGGCATAGGAGCGGGAGGCACCAAAGATAGATCATTCAAGGCCTCAATCCTTAGTGGAACGCTAGATGACGCAGGAAAAAGGT T37-m0087 1881 .(((((....)))))(((((.(((..(((.((((((.(((....)))...((((.......((..((..((.....))..))..))..(((((...((.((.....)).)).......((....))...)))))..))))))))))...)))..)))))))).......... ********************************************************************************************************************************************TAGTGGAACGCTAGATGACGCA********** T37-m0087-3p 1874 -----------------------------------ACGTGGCAACACTCTAGGAGCAGGT---------------------------------------------------------------------------------------------------------------- t0951839 1 -------------------------------------------------------------------------------------------------GAGCGGGAGGCACCAAAGATAGAT--------------------------------------------------- t3094577 1 --------------------------------------------------------------------------------------------------AGCGGGAGGCACCAAAGATAGATC-------------------------------------------------- t3566707 1 ------------------------------------------------------------------------------------------------------GGAGGCACCAAAGATAGATCAT------------------------------------------------ t2310158 1 --------------------------------------------------------------------------------------------------------AGGCACCAAAGATAGATCATTCAA-------------------------------------------- t2315501 1 -----------------------------------------------------------------------------------------------------------CACCAAAGATAGATCATTCAA-------------------------------------------- t3046776 1 -----------------------------------------------------------------------------------------------------------------AGATAGATCATTCAAGGCCTCAAT----------------------------------- t2780724 1 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACG------------ t0021765 33 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACGC----------- t0098881 9 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACGCA---------- t0008336 76 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACGCAG--------- t2564746 1 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACG------------ t0073116 11 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACGC----------- t0004262 138 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACGCA---------- t0023055 31 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACGCAG--------- t0031098 24 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACG------------ t0088710 9 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGC----------- t0010186 64 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCA---------- t0000452 877 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCAG--------- t0006365 97 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCAGG-------- t0002361 228 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCAGGA------- t0277473 4 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGC----------- t0176145 5 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCA---------- t0005806 106 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCAG--------- t0005187 117 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCAGG-------- t0120514 7 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCAGGA------- t0019901 36 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCAGGAA------ t3876183 1 // T37-m0287 scaffold36.0:734774:734945:- 172(nt) -50.40(kcal/mol) AGCCTTCACAAAGGTTGTGTACGTGAAGCCCCACTACGTGGCAACACTCTAGGAGCAGGTGGCATCGGAGCAGGAGGCATCGGAGCGAGAGGCATAGGAGCGGGAGGCACCAAAGATAGATCATTCAAGGCCTCAATCCTTAGTGGAACGCTAGATGACGCAGGAAAAAGGT T37-m0287 1881 .(((((....)))))(((((.(((..(((.((((((.(((....)))...((((.......((..((..((.....))..))..))..(((((...((.((.....)).)).......((....))...)))))..))))))))))...)))..)))))))).......... ********************************************************************************************************************************************TAGTGGAACGCTAGATGACGCA********** T37-m0287-3p 1874 -----------------------------------ACGTGGCAACACTCTAGGAGCAGGT---------------------------------------------------------------------------------------------------------------- t0951839 1 -------------------------------------------------------------------------------------------------GAGCGGGAGGCACCAAAGATAGAT--------------------------------------------------- t3094577 1 --------------------------------------------------------------------------------------------------AGCGGGAGGCACCAAAGATAGATC-------------------------------------------------- t3566707 1 ------------------------------------------------------------------------------------------------------GGAGGCACCAAAGATAGATCAT------------------------------------------------ t2310158 1 --------------------------------------------------------------------------------------------------------AGGCACCAAAGATAGATCATTCAA-------------------------------------------- t2315501 1 -----------------------------------------------------------------------------------------------------------CACCAAAGATAGATCATTCAA-------------------------------------------- t3046776 1 -----------------------------------------------------------------------------------------------------------------AGATAGATCATTCAAGGCCTCAAT----------------------------------- t2780724 1 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACG------------ t0021765 33 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACGC----------- t0098881 9 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACGCA---------- t0008336 76 ------------------------------------------------------------------------------------------------------------------------------------------CTTAGTGGAACGCTAGATGACGCAG--------- t2564746 1 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACG------------ t0073116 11 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACGC----------- t0004262 138 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACGCA---------- t0023055 31 -------------------------------------------------------------------------------------------------------------------------------------------TTAGTGGAACGCTAGATGACGCAG--------- t0031098 24 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACG------------ t0088710 9 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGC----------- t0010186 64 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCA---------- t0000452 877 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCAG--------- t0006365 97 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCAGG-------- t0002361 228 --------------------------------------------------------------------------------------------------------------------------------------------TAGTGGAACGCTAGATGACGCAGGA------- t0277473 4 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGC----------- t0176145 5 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCA---------- t0005806 106 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCAG--------- t0005187 117 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCAGG-------- t0120514 7 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCAGGA------- t0019901 36 ---------------------------------------------------------------------------------------------------------------------------------------------AGTGGAACGCTAGATGACGCAGGAA------ t3876183 1 // novel82 T24-m0091 scaffold152.0:515755:515824:- 70(nt) -21.60(kcal/mol) CTTGATCCAATGGCCTTGGTGGAAGAGATCCGGAGAAGATCTCTTTCCATTATAATGTGATTGTGTTGTA T24-m0091 28 ...((..((((.((..((((((((((((((.......)))))).))))))))....)).))))..))... **********TGGCCTTGGTGGAAGAGATCC*************************************** T24-m0091-5p 27 ----------TGGCCTTGGTGGAAGAGA------------------------------------------ t3457818 1 ----------TGGCCTTGGTGGAAGAGAT----------------------------------------- t3041727 1 ----------TGGCCTTGGTGGAAGAGATC---------------------------------------- t3721814 1 ----------TGGCCTTGGTGGAAGAGATCC--------------------------------------- t0058072 20 ----------TGGCCTTGGTGGAAGAGATCCGGA------------------------------------ t1840996 1 ------------GCCTTGGTGGAAGAGATCCGGAG----------------------------------- t4092056 1 ------------GCCTTGGTGGAAGAGATCCGGAGA---------------------------------- t2448785 1 -------------CCTTGGTGGAAGAGATCCGGAGA---------------------------------- t2719656 1 --------------CTTGGTGGAAGAGATCCGGAG----------------------------------- t4557129 1 // T37-m0095 scaffold152.0:515784:515969:- 186(nt) -98.00(kcal/mol) AGATTTTTTCCAGATCTCTTCTACCAAGATCACCGAATCAAGTGATCCGATTTTTTGAAATTTCATCAAACGGTCCACCTATTTTGATCCTTTAAAAGTTACAATAATTTGTTACCGTTGGATGAAATTTCAAAAGATTGGATCACTTGATCCAATGGCCTTGGTGGAAGAGATCCGGAGAAGATC T37-m0095 39 .((((((((((.((((((((((((((((..((..(.(((((((((((((((((((((((((((((((.((((((.......((((((....))))))...((((....)))).)))))).))))))))))))))))))))))))))))))).)..))..)))))))))))))))).)))))))))) ***********************************************************************************************************************************************************TGGCCTTGGTGGAAGAGATCC********** T37-m0095-3p 38 ---------------------------------------------------------AAATTTCATCAAACGGTCCACCT---------------------------------------------------------------------------------------------------------- t2380089 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------TGGCCTTGGTGGAAGAGATC----------- t1305535 1 -----------------------------------------------------------------------------------------------------------------------------------------------------------TGGCCTTGGTGGAAGAGATCC---------- t0022585 32 -----------------------------------------------------------------------------------------------------------------------------------------------------------TGGCCTTGGTGGAAGAGATCCGGA------- t0227629 4 ------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCTTGGTGGAAGAGATCCGGAG------ t1612308 1 // novel90 T24-m0101 scaffold166.0:229261:229531:+ 271(nt) -72.96(kcal/mol) CGTTTGCTGATTTCTCTCGTAAAATATGGAGAAAATAGATTTGTAATCTTACTAGCTGGTGTTTTAACCCCAACGGGGCCAACACAGCATGACAAAATTACAAGCTGGATAGTATAGGTTTAGTAGAAGAGTCAAAAAAGGAGCTGTAAGCAGTCTATCAAGTTCCCACATCGACCACGGCAGCAACAAGGAGCTGGAGACGGTATTATAAAATAAAGCAGCTTGCGTGTGGTATAACTCACGGAGCCATGCGTTGAGCACAAAGCGAACT T24-m0101 25 .(((((((..((((((.((((...))))))))))......(((((((.((..((((((.((((....((((...))))..)))))))).))..)).)))))))(((.(((.((((.(((((.((....((((.......((((((...............)))))).......(((((((((((........((((....)))).((((...))))....)).))).))))))...)))))).)))))))))))).)))....))))))). ************************************************************************************************************************************************************************************************************************************************ACGGAGCCATGCGTTGAGCAC********** T24-m0101-3p 25 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCACGGAGCCATGCGTT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGAGCCATGCGTT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGAGCCATGCGTT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGAGCCATGCGTT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGAGCCATGCGTT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGAGCCATGCGTT // T37-m0107 scaffold166.0:229261:229531:+ 271(nt) -72.96(kcal/mol) CGTTTGCTGATTTCTCTCGTAAAATATGGAGAAAATAGATTTGTAATCTTACTAGCTGGTGTTTTAACCCCAACGGGGCCAACACAGCATGACAAAATTACAAGCTGGATAGTATAGGTTTAGTAGAAGAGTCAAAAAAGGAGCTGTAAGCAGTCTATCAAGTTCCCACATCGACCACGGCAGCAACAAGGAGCTGGAGACGGTATTATAAAATAAAGCAGCTTGCGTGTGGTATAACTCACGGAGCCATGCGTTGAGCACAAAGCGAACT T37-m0107 23 .(((((((..((((((.((((...))))))))))......(((((((.((..((((((.((((....((((...))))..)))))))).))..)).)))))))(((.(((.((((.(((((.((....((((.......((((((...............)))))).......(((((((((((........((((....)))).((((...))))....)).))).))))))...)))))).)))))))))))).)))....))))))). ************************************************************************************************************************************************************************************************************************************************ACGGAGCCATGCGTTGAGCAC********** T37-m0107-3p 22 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACTCACGGAGCCATGCGTT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGAGCCATGCGTT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGAGCCATGCGTT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGAGCCATGCGTT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGAGCCATGCGTT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGAGCCATGCGTT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGAGCCATGCGTT ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACGGAGCCATGCGTT // novel91 T24-m0102 scaffold168.0:267454:267581:+ 128(nt) -35.70(kcal/mol) AACCAGCATACTGAACACTGAGAGCTAAGGAGTCTTGAACTACCGACTCATCAGAACGTTTTGAAATGATTCTGTTATCCTTTGGAGTGAGAAGATTCTTAGCTACCACTGTACCGGTAATGTTATTC T24-m0102 242 ....(((((((((.(((.((..(((((((.((((((..(((.((((.....(((((((((....)))).))))).......)))))))...)))))))))))))..)).)))..)))).))))).... **********CTGAACACTGAGAGCTAAGGAG************************************************************************************************ T24-m0102-5p 236 ---------ACTGAACACTGAGAGCTAAGGAG------------------------------------------------------------------------------------------------ t0547001 3 ---------ACTGAACACTGAGAGCTAAGGAGT----------------------------------------------------------------------------------------------- t0091733 13 ----------CTGAACACTGAGAGCTAAGGA------------------------------------------------------------------------------------------------- t0150334 9 ----------CTGAACACTGAGAGCTAAGGAG------------------------------------------------------------------------------------------------ t0003771 173 ----------CTGAACACTGAGAGCTAAGGAGT----------------------------------------------------------------------------------------------- t0252009 6 ----------CTGAACACTGAGAGCTAAGGAGTC---------------------------------------------------------------------------------------------- t0270951 5 -----------TGAACACTGAGAGCTAAGGA------------------------------------------------------------------------------------------------- t2455240 1 -----------TGAACACTGAGAGCTAAGGAG------------------------------------------------------------------------------------------------ t0072697 16 -----------TGAACACTGAGAGCTAAGGAGT----------------------------------------------------------------------------------------------- t0654324 3 -----------TGAACACTGAGAGCTAAGGAGTC---------------------------------------------------------------------------------------------- t0184260 7 ------------------TGAGAGCTAAGGAGTCTTGAA----------------------------------------------------------------------------------------- t0376441 4 ------------------TGAGAGCTAAGGAGTCTTGAAC---------------------------------------------------------------------------------------- t3801113 1 -----------------------------------------------------------------------------------------AGAAGATTCTTAGCTACCACTGTA--------------- t4995297 1 // T37-m0109 scaffold168.0:267454:267581:+ 128(nt) -35.70(kcal/mol) AACCAGCATACTGAACACTGAGAGCTAAGGAGTCTTGAACTACCGACTCATCAGAACGTTTTGAAATGATTCTGTTATCCTTTGGAGTGAGAAGATTCTTAGCTACCACTGTACCGGTAATGTTATTC T37-m0109 255 ....(((((((((.(((.((..(((((((.((((((..(((.((((.....(((((((((....)))).))))).......)))))))...)))))))))))))..)).)))..)))).))))).... **********CTGAACACTGAGAGCTAAGGAG************************************************************************************************ T37-m0109-5p 251 ---------ACTGAACACTGAGAGCTAAGGA------------------------------------------------------------------------------------------------- t0159643 6 ---------ACTGAACACTGAGAGCTAAGGAGT----------------------------------------------------------------------------------------------- t0047966 16 ----------CTGAACACTGAGAGCTAAGGA------------------------------------------------------------------------------------------------- t0073866 11 ----------CTGAACACTGAGAGCTAAGGAG------------------------------------------------------------------------------------------------ t0003186 176 ----------CTGAACACTGAGAGCTAAGGAGT----------------------------------------------------------------------------------------------- t0128616 7 ----------CTGAACACTGAGAGCTAAGGAGTC---------------------------------------------------------------------------------------------- t0178316 5 -----------TGAACACTGAGAGCTAAGGAG------------------------------------------------------------------------------------------------ t0074384 11 -----------TGAACACTGAGAGCTAAGGAGT----------------------------------------------------------------------------------------------- t0135495 7 -----------TGAACACTGAGAGCTAAGGAGTC---------------------------------------------------------------------------------------------- t0072513 11 ------------GAACACTGAGAGCTAAGGAGTC---------------------------------------------------------------------------------------------- t3114995 1 ---------------CACTGAGAGCTAAGGAGTC---------------------------------------------------------------------------------------------- t3541158 1 ---------------CACTGAGAGCTAAGGAGTCTT-------------------------------------------------------------------------------------------- t1596694 1 ----------------ACTGAGAGCTAAGGAGTCTTGAA----------------------------------------------------------------------------------------- t1473703 1 ------------------------------------------------------------------------TGTTATCCTTTGGAGTGAGAAGAT-------------------------------- t2655581 1 //