{"text_format":"2","workbook":"xlsx","n_sheets":4,"sheets":["README","Oct4_TFTG_Geneset","Oct4_TFTG_medium","Oct4_TFTG_high"],"not_rendered":{"charts":0,"images":1,"macros":0,"external_links":0,"defined_names":0,"comments":0,"pivot_tables":0},"unopened":[],"bounds":{"document_bytes":16777216,"sheet_cells":100000,"run_cost":"one","rows_first":2000,"rows_last":500,"rows_between":2000,"halvings":0,"cell_chars":16384,"cell_head_chars":4096},"cells_cut":0,"cells_raw":0,"read":"whole","date_system":"1904"}

{"sheet":"README","index":0,"n_rows":5,"n_cols":1,"rows_kept":5,"cut":false,"hidden":false,"merged":[[1,0,1,2],[0,0,0,2],[4,0,4,2],[3,0,3,2],[2,0,2,2]]}
["The table contains multiple sheets that show GSCA analysis of Oct4 and its target genes in Example II"]
[]
["Oct4_TFTG_Geneset: This table contains the two gene sets: Oct4 and its target genes. It can be directly imported into GSCA to perform the analysis."]
["Oct4_TFTG_medium: This table contains the output of GSCA analysis for medium expression in Oct4 and its target genes. First seven columns: the exact output of GSCA Graphical User Interface. Last column: added column indicating whether the sample is undifferentiated embryonic stem cell or differentiating/other cell types."]
["Oct4_TFTG_high: This table contains the output of GSCA analysis for high expression in Oct4 and its target genes. First seven columns: the exact output of GSCA Graphical User Interface. Last column: added column indicating whether the sample is undifferentiated embryonic stem cell or differentiating/other cell types."]

{"sheet":"Oct4_TFTG_Geneset","index":1,"n_rows":859,"n_cols":4,"rows_kept":859,"cut":false,"hidden":false,"merged":[]}
[]
[null,"ENTREZ_ID","weight","Genesetname"]
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{"sheet":"Oct4_TFTG_medium","index":2,"n_rows":15,"n_cols":8,"rows_kept":15,"cut":false,"hidden":false,"merged":[]}
["Rank","Active","Total","FoldChange","Adj.Pvalue","SampleType","ExperimentID","Cell Type"]
[1,5,5,61.988,5.05e-07,"embyoid_body_e14:normal","GSE8128","Differentiating or others"]
[2,4,4,59.549,3.93e-05,"embryoid_bodies:neuralized_embryoid_bodies_treated_with_500nm_retinoic_acid","GSE4936","Differentiating or others"]
[3,4,4,59.549,3.93e-05,"embryoid_bodies:neuralized_embryoid_bodies_treated_with_500nm_retinoic_acid_and_1m_of_hh_agonist_(hhag)","GSE4936","Differentiating or others"]
[4,4,4,59.549,3.93e-05,"oocyte:gv_oocyte_from_old_mice_(66_weeks)","GSE11667","Differentiating or others"]
[5,4,4,59.549,3.93e-05,"oocyte:gv_oocyte_from_young_mice_(6_weeks)","GSE11667","Differentiating or others"]
[6,4,4,59.549,3.93e-05,"oocyte:mii_oocyte_from_old_mice_(66_weeks)","GSE11667","Differentiating or others"]
[7,4,4,59.549,3.93e-05,"oocyte:mii_oocyte_from_young_mice_(6_weeks)","GSE11667","Differentiating or others"]
[8,4,8,33.083,0.00264,"embryo:b6d2_2cell_scnt_embryos","GSE6595","Differentiating or others"]
[9,4,8,33.083,0.00264,"mef:neo(r)_mefs_derived_from_chimeric_mice_generated_from_nanoggfp_ips_cells_with_inducible_lentivirus_expressing_oct4,_klf4,_sox2_and_cmyc","GSE10871","Differentiating or others"]
[10,3,3,55.89,0.00302,"embryonic_stem_cells:cag_150_embryonic_stem_cells_following_six_days_of_neuronal_differentiation,_replicate_one","GSE9760","Differentiating or others"]
[11,3,3,55.89,0.00302,"epididymus:gd12","GSE5333","Differentiating or others"]
[12,3,3,55.89,0.00302,"neuronal_progenitor_cells:neuronal_progenitor_cells_marked_by_sox1gfp","GSE12982","Differentiating or others"]
[13,3,3,55.89,0.00302,"ovary:ovary_sample_from_pd14_foxo3_null","GSE8249","Differentiating or others"]
[14,3,3,55.89,0.00302,"ovary:ovary_sample_from_pd7_foxo3_null","GSE8249","Differentiating or others"]

{"sheet":"Oct4_TFTG_high","index":3,"n_rows":11,"n_cols":8,"rows_kept":11,"cut":false,"hidden":false,"merged":[]}
["Rank","Active","Total","FoldChange","Adj.Pvalue","SampleType","ExperimentID","Cell Type"]
[1,8,8,118.259,7.1e-15,"e14tg2a_cells:normal","GSE4308;GSE4309","Undifferentiated"]
[2,4,4,106.533,3.6e-06,"es_cell_control:es_cell_control","GSE14012","Undifferentiated"]
[3,4,4,106.533,3.6e-06,"es_cells:ctr9_esirna_day4","GSE12078","Undifferentiated"]
[4,4,4,106.533,3.6e-06,"es_cells:luc_esirna_day4","GSE12078","Undifferentiated"]
[5,4,4,106.533,3.6e-06,"ips_clone:ips_clone","GSE14012","Undifferentiated"]
[6,5,12,51.199,1.89e-05,"embryonic_stem_cells:r1,_undifferentiated_mouse_embryonic_stem_cells;_fractionated_polysomal_rna","GSE9563","Undifferentiated"]
[7,5,13,47.542,3.06e-05,"embryonic_stem_cells:normal","GSE10476;GSE10573;GSE10553;GSE10806","Undifferentiated"]
[8,3,3,99.938,0.00051,"embryonic_stem_cell:es_cells_heterozygous_for_dicer_date_of_analysis_16082006","GSE7141","Undifferentiated"]
[9,3,3,99.938,0.00051,"induced_pluripotent_cells:ips_cells_2_factors","GSE10806","Undifferentiated"]
[10,3,3,99.938,0.00051,"v65_embryonic_stem_cells:normal","GSE8024","Undifferentiated"]