Utility of Whole-Genome Sequencing in Characterizing Acinetobacter Epidemiology and Analyzing Hospital Outbreaks

Supplemental material

  • Supplemental file 1 -

    Table S1 (Dates of isolation, assembly statistics, and NCBI accession information for Acinetobacter isolates)

    XLSX, 68K

  • Supplemental file 2 -

    Fig. S1 (Phylogenetic analysis based on core genome sequences of all Acinetobacter isolates)

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  • Supplemental file 3 -

    Fig. S2 (Cluster analysis based on Rep-PCR results for all ACB complex isolates)

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  • Supplemental file 4 -

    Fig. S3 (Phylogenetic analysis based on MLST results for A. baumannii isolates)

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  • Supplemental file 5 -

    Fig. S4 (Cluster analysis based on Rep-PCR results for A. baumannii isolates)

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  • Supplemental file 6 -

    Fig. S5 (Relationship between A. baumannii strains in this study and globally disseminated strains of A. baumannii)

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  • Supplemental file 7 -

    Fig. S6 (Epidemiologic curve of new CRAB infections during the outbreak period)

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  • Supplemental file 8 -

    Fig. S7 (A Bayesian phylogenetic reconstruction of the ABOB outbreak isolates)

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  • Supplemental file 9 -

    Fig. S8 (Comparison of AGEs that differed between ABOB isolates with A. baumannii plasmid ABKp1)

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