High Degree of HIV-1 Group M (HIV-1M) Genetic Diversity within Circulating Recombinant Forms: Insight into the Early Events of HIV-1M Evolution

Supplemental material

• Supplemental file 1 -

  Fig. S1 (Schematic representations of how a recombination-free tree was constructed and of how the reconstruction of some of the CRFs from the Congo basin was done.)

  Fig. S2 (Maximum likelihood tree indicating the phylogenetic relationships between 480 HIV-1M near-full-length genomes from which all detectable evidence of recombination has been removed.)

  Fig. S3 (Reanalysis of the origins of recombinationally derived sequence fragments within CRF18_cpx, CRF25_cpx, and CRF49_cpx from the Congo basin.)

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